##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921562_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5859591 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.71372626519496 31.0 28.0 31.0 15.0 34.0 2 27.684732432690268 31.0 28.0 33.0 12.0 34.0 3 27.776698066469145 31.0 28.0 33.0 15.0 34.0 4 31.145927591191946 35.0 32.0 37.0 16.0 37.0 5 31.05467634174467 35.0 32.0 37.0 16.0 37.0 6 31.13945853900042 35.0 32.0 37.0 15.0 37.0 7 30.926669113936452 35.0 32.0 37.0 11.0 37.0 8 30.866090312446723 35.0 32.0 37.0 10.0 37.0 9 32.067409994997945 37.0 32.0 39.0 10.0 39.0 10-11 31.830933336473485 37.0 31.0 39.0 10.0 39.0 12-13 31.623935441910536 37.0 31.0 39.0 10.0 39.0 14-15 32.29707892581581 37.5 31.0 40.0 8.0 41.0 16-17 32.1391591153717 37.0 31.0 40.0 7.5 41.0 18-19 31.941668880985038 37.0 30.5 40.0 2.0 41.0 20-21 31.794447257496298 37.0 30.0 40.0 2.0 41.0 22-23 31.558472852456767 37.0 30.0 40.0 2.0 41.0 24-25 31.647986437961286 37.0 30.0 40.0 2.0 41.0 26-27 31.391754305035967 37.0 30.0 40.0 2.0 41.0 28-29 31.183908313737255 37.0 30.0 40.0 2.0 41.0 30-31 30.921083997159528 37.0 29.0 40.0 2.0 41.0 32-33 30.664496208011787 36.0 29.0 40.0 2.0 41.0 34-35 30.314394810149718 36.0 27.5 39.5 2.0 41.0 36-37 30.000719333482493 36.0 27.0 39.0 2.0 41.0 38-39 29.764297286278172 35.5 26.5 39.0 2.0 40.0 40-41 29.513943379324598 35.0 26.0 39.0 2.0 40.0 42-43 29.246485974874354 35.0 25.5 39.0 2.0 40.0 44-45 28.96734447847981 35.0 24.5 39.0 2.0 40.0 46-47 28.65857087977642 35.0 24.0 39.0 2.0 40.0 48-49 28.346929845444844 34.0 23.5 38.5 2.0 40.0 50-51 27.43186341845361 33.0 22.5 37.5 2.0 39.5 52-53 27.63195528493371 33.5 23.0 37.5 2.0 39.5 54-55 28.171661810525684 34.0 23.0 38.5 2.0 40.0 56-57 28.127256578146834 34.0 23.0 39.0 2.0 40.0 58-59 27.86782405120084 34.0 23.0 38.0 2.0 40.0 60-61 27.50722388303211 34.0 22.0 38.0 2.0 40.0 62-63 27.071427681556614 33.5 20.5 37.5 2.0 40.0 64-65 26.587020152089114 33.0 19.5 37.0 2.0 39.5 66-67 26.22613088524438 33.0 18.0 36.5 2.0 39.0 68-69 25.761291786406254 32.0 15.0 36.0 2.0 39.0 70-71 25.32822913749441 32.0 11.5 35.5 2.0 38.5 72-73 24.848810949433158 31.5 7.5 35.0 2.0 37.5 74-75 24.401665747660545 31.0 4.5 35.0 2.0 37.0 76-77 23.9696677635009 31.0 2.0 35.0 2.0 36.5 78-79 23.57139380547209 31.0 2.0 34.5 2.0 36.0 80-81 23.13043197042251 30.5 2.0 34.0 2.0 35.5 82-83 22.593473247535535 30.0 2.0 34.0 2.0 35.0 84-85 22.17035429605923 30.0 2.0 34.0 2.0 35.0 86-87 21.66721713170766 29.0 2.0 34.0 2.0 35.0 88-89 21.150822813401142 29.0 2.0 34.0 2.0 35.0 90-91 20.558370200240937 29.0 2.0 34.0 2.0 35.0 92-93 20.010480338986117 27.5 2.0 34.0 2.0 35.0 94-95 19.323802036695053 26.5 2.0 33.0 2.0 35.0 96-97 18.677750802061098 25.0 2.0 33.0 2.0 35.0 98 18.19966018106042 25.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 438206.0 3 70860.0 4 50112.0 5 40501.0 6 37259.0 7 39026.0 8 44376.0 9 50015.0 10 52852.0 11 54352.0 12 55068.0 13 53368.0 14 51811.0 15 52794.0 16 56589.0 17 59908.0 18 62151.0 19 63154.0 20 65796.0 21 69566.0 22 75383.0 23 83104.0 24 93108.0 25 105692.0 26 120384.0 27 137910.0 28 157131.0 29 180170.0 30 207634.0 31 240041.0 32 282377.0 33 337540.0 34 410796.0 35 504153.0 36 599994.0 37 579043.0 38 260705.0 39 16662.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.12998112618069 16.79804157375983 12.958156614182329 25.113820685877165 2 16.480599517039007 18.53051733709638 38.86576296077514 26.123120185089466 3 20.55747497153351 22.185508905030442 27.22711220362286 30.029903919813194 4 14.074145222309879 14.459234415611938 34.320484721536694 37.14613564054149 5 15.750933842570985 35.96460720847679 32.54993154584036 15.734527403111857 6 35.813625648295215 32.461051062116475 16.486770116147593 15.23855317344072 7 31.823587883200066 30.019849555869175 18.92583273035712 19.230729830573644 8 28.248214079668127 33.40396449393064 18.659172048494828 19.68864937790641 9 27.73666104106417 15.854521509736935 18.163647001635795 38.245170447563105 10-11 27.14454001152835 24.335615821744895 25.827312806155167 22.69253136057159 12-13 27.521560220986927 21.382371564573138 26.23555896142286 24.860509253017067 14-15 24.704757865307815 22.954746877708228 23.535062817066922 28.805432439917034 16-17 25.116980064234923 26.022645387923575 24.16996039335613 24.690414154485367 18-19 25.1038818116544 25.37922944326862 25.48743557278642 24.02945317229056 20-21 25.854325161945262 24.46596055090048 25.28447465309891 24.395239634055347 22-23 25.644199187634275 24.123776859963012 25.127787435239245 25.10423651716347 24-25 25.19927224020309 24.474202599322695 25.121163773453674 25.205361387020535 26-27 25.072518962375206 24.65832621375045 25.224453693899818 25.044701129974527 28-29 25.11583962316938 24.838256782494188 25.069607139211286 24.976296455125148 30-31 25.380164496606106 24.65629948996538 24.92715529746696 25.03638071596156 32-33 25.055044849699414 24.7039800347463 24.953503030592707 25.287472084961575 34-35 25.39883720123864 24.7008565814463 25.101874811594634 24.798431405720432 36-37 25.32649666640928 24.664551997407756 24.99968933850011 25.009261997682852 38-39 25.467194139937256 24.644645625706843 24.922486633757988 24.965673600597917 40-41 25.39264616107389 24.61828506830048 24.919236547862937 25.069832222762688 42-43 25.251350609938093 24.452885105294005 24.921280974057858 25.374483310710044 44-45 25.150304522344126 24.57166711265721 25.032640085630188 25.245388279368473 46-47 25.286998231044272 24.448600390956603 24.970338285273293 25.29406309272584 48-49 25.190072434275812 24.59346218815375 24.91130780812397 25.305157569446475 50-51 25.080308041730554 24.690554794685944 25.041697500581854 25.187439663001648 52-53 25.16302971001586 24.61300764487834 25.099905682353345 25.124056962752455 54-55 24.879875983994143 24.427587959099114 25.356089017478787 25.336447039427952 56-57 25.000982786126297 24.540242372616145 25.171212477161465 25.287562364096093 58-59 25.049621370532837 24.47346545376453 25.229277276512025 25.247635899190612 60-61 25.208679391057725 24.36972285609345 25.268538795959326 25.153058956889495 62-63 24.99014126444096 24.41991456875771 25.318979870709907 25.27096429609142 64-65 24.87284845330856 24.296116342701662 25.398790178150062 25.432245025839716 66-67 24.907913241577262 24.49902713068318 25.23453895109678 25.358520676642776 68-69 24.893006742392814 24.3449491569547 25.256283287540555 25.505760813111934 70-71 24.874906844156104 24.20685584205392 25.360802589229493 25.55743472456048 72-73 24.85086192537096 24.375333717145498 25.26919493087187 25.504609426611673 74-75 24.73806408810615 24.454871624979578 25.35565301879828 25.451411268115994 76-77 24.761229370263806 24.16482700694081 25.449636116247664 25.624307506547716 78-79 24.699575102415537 24.13042015747967 25.50976668721454 25.660238052890254 80-81 24.737039125250714 24.303272641627956 25.348004232569494 25.611684000551836 82-83 24.787714523709177 24.34376552426347 25.315389695603752 25.5531302564236 84-85 24.804983788053782 24.348558769321357 25.274417732877964 25.572039709746896 86-87 24.619641914229547 24.320769265659727 25.48519415211585 25.574394667994877 88-89 24.618845896311154 24.119058107521145 25.465576328494393 25.796519667673305 90-91 24.67569403291399 24.0380714596028 25.544974729605237 25.74125977787797 92-93 24.740244708640965 24.145199213543485 25.4932661265305 25.621289951285053 94-95 24.704472705354984 24.07514999545507 25.531863538501014 25.688513760688924 96-97 24.573726228562204 24.061899845713434 25.583881273465874 25.780492652258484 98 24.717223722994024 23.930720775020202 25.48477706135206 25.86727844063371 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 86.0 1 89.5 2 148.0 3 213.0 4 240.5 5 322.0 6 474.0 7 809.0 8 1166.0 9 1292.0 10 1340.5 11 1492.0 12 1743.0 13 1952.5 14 2186.5 15 2484.0 16 2553.0 17 2545.0 18 2598.5 19 2465.5 20 2331.0 21 2280.5 22 2236.0 23 2330.5 24 2596.5 25 2914.0 26 3410.0 27 4035.0 28 4956.0 29 6852.0 30 10031.0 31 14952.0 32 22193.0 33 31057.5 34 42383.5 35 55895.0 36 70839.0 37 85976.5 38 99587.0 39 113079.0 40 127497.0 41 142565.0 42 160685.0 43 181386.0 44 200214.5 45 219769.5 46 240054.5 47 257673.5 48 271817.5 49 282840.0 50 287892.0 51 287620.0 52 288737.5 53 291324.5 54 288540.0 55 280111.5 56 265510.0 57 245263.0 58 223068.0 59 199349.0 60 174041.0 61 146118.0 62 118921.5 63 92845.0 64 69474.5 65 51552.5 66 38038.5 67 28099.0 68 20874.5 69 15679.5 70 11787.0 71 8764.0 72 6614.0 73 4956.0 74 3777.0 75 2800.0 76 1880.5 77 1188.5 78 732.0 79 429.5 80 249.5 81 159.5 82 115.0 83 72.0 84 51.5 85 48.5 86 39.5 87 26.0 88 15.0 89 18.5 90 19.0 91 14.5 92 15.5 93 16.5 94 15.5 95 8.0 96 4.5 97 5.5 98 3.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.31002163802900234 2 0.1538503284614916 3 0.1510856303793217 4 0.14470293233776896 5 0.14045348898924856 6 0.05251219752368383 7 0.04322827309960712 8 0.016844179056183274 9 0.011314782891843475 10-11 0.0021076556367159416 12-13 0.007184801806132885 14-15 0.012176617787828536 16-17 0.008072235758434333 18-19 0.05420173524056542 20-21 0.10754163558514579 22-23 0.10778909312953754 24-25 0.08382837641739842 26-27 0.09271124895918503 28-29 0.11201293742174157 30-31 0.08847887164820889 32-33 0.02412284406880958 34-35 0.3320624255174124 36-37 0.4311990376120108 38-39 0.39831278326422437 40-41 0.394259599347463 42-43 0.3682936232238735 44-45 0.35034015172731336 46-47 0.35557942525340075 48-49 0.3487530102356974 50-51 0.3500585621078331 52-53 0.400394839844624 54-55 0.3857351135941058 56-57 0.3685666798245816 58-59 0.3476863828891812 60-61 0.35684231203167593 62-63 0.35600607619200725 64-65 0.37326837316802486 66-67 0.39673417479138046 68-69 0.35477732148882063 70-71 0.32841029348294104 72-73 0.3104653550051531 74-75 0.2948072655582958 76-77 0.2982802041985524 78-79 0.306301241844354 80-81 0.2948499306521564 82-83 0.30597698713101307 84-85 0.2977767560909968 86-87 0.292443619358416 88-89 0.3193396945281676 90-91 0.299969741915434 92-93 0.2889024165679823 94-95 0.3057209965678492 96-97 0.30486769469063624 98 0.30346827961200706 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 5859591.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.572542890137974 #Duplication Level Percentage of deduplicated Percentage of total 1 76.40803272493228 39.40556544857637 2 11.007314602566353 11.353504088921907 3 4.611825223756435 7.135306624619966 4 2.288608802732366 4.721175025506491 5 1.4113462745719783 3.63933581390999 6 0.9032765264460955 2.795056044107767 7 0.6217412551841371 2.2445344284686493 8 0.46478324268641846 1.917604297445018 9 0.3248474408031925 1.5077887716216785 >10 1.793788346359141 16.66341492509707 >50 0.11586665139304644 4.079129754659869 >100 0.04750087284961568 4.081169234889397 >500 8.344059233878953E-4 0.2770421048106918 >1k 2.3362979565581089E-4 0.17937343736505362 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 1.7066037544258635E-5 0.0 0.0 0.0 6 0.0 1.7066037544258635E-5 0.0 0.0 0.0 7 0.0 1.7066037544258635E-5 0.0 0.0 0.0 8 0.0 1.7066037544258635E-5 0.0 0.0 1.7066037544258635E-5 9 0.0 1.7066037544258635E-5 0.0 1.7066037544258635E-5 1.7066037544258635E-5 10-11 0.0 1.7066037544258635E-5 0.0 1.7066037544258635E-5 1.7066037544258635E-5 12-13 0.0 1.7066037544258635E-5 0.0 3.413207508851727E-5 1.7066037544258635E-5 14-15 0.0 1.7066037544258635E-5 0.0 3.413207508851727E-5 3.413207508851727E-5 16-17 0.0 1.7066037544258635E-5 0.0 7.679716894916385E-5 5.11981126327759E-5 18-19 0.0 1.7066037544258635E-5 0.0 1.1946226280981044E-4 5.11981126327759E-5 20-21 0.0 1.7066037544258635E-5 0.0 1.2799528158193976E-4 5.11981126327759E-5 22-23 0.0 1.7066037544258635E-5 0.0 2.2185848807536226E-4 5.11981126327759E-5 24-25 0.0 1.7066037544258635E-5 0.0 3.925188635179486E-4 5.11981126327759E-5 26-27 0.0 1.7066037544258635E-5 0.0 8.959669710735783E-4 5.11981126327759E-5 28-29 0.0 1.7066037544258635E-5 0.0 0.003362009396218951 7.679716894916385E-5 30-31 0.0 1.7066037544258635E-5 0.0 0.011852363074487622 8.533018772129318E-5 32-33 0.0 2.559905631638795E-5 0.0 0.029805834571047705 8.533018772129318E-5 34-35 0.0 3.413207508851727E-5 0.0 0.05417613618424903 8.533018772129318E-5 36-37 0.0 3.413207508851727E-5 8.533018772129318E-6 0.09715695173946441 8.533018772129318E-5 38-39 0.0 3.413207508851727E-5 1.7066037544258635E-5 0.1669485122767101 8.533018772129318E-5 40-41 0.0 3.413207508851727E-5 1.7066037544258635E-5 0.24869483211370896 8.533018772129318E-5 42-43 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 0.33031315666912586 9.386320649342249E-5 44-45 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 0.4289633866937129 1.023962252655518E-4 46-47 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 0.5461473334913648 1.023962252655518E-4 48-49 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 0.6772742329626761 1.023962252655518E-4 50-51 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 0.8174461323324445 1.023962252655518E-4 52-53 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 0.9662107816057468 1.023962252655518E-4 54-55 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 1.134874430655655 1.1092924403768113E-4 56-57 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 1.3313557209027045 1.1946226280981044E-4 58-59 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 1.547206963762488 1.1946226280981044E-4 60-61 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 1.7842371592146962 1.1946226280981044E-4 62-63 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 2.0258325197099936 1.1946226280981044E-4 64-65 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 2.286251719616608 1.1946226280981044E-4 66-67 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 2.5876208766106714 1.1946226280981044E-4 68-69 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 2.9259294718692823 1.1946226280981044E-4 70-71 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 3.2935831186852464 1.1946226280981044E-4 72-73 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 3.674642137992225 1.1946226280981044E-4 74-75 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 4.068381223194589 1.1946226280981044E-4 76-77 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 4.500570090984166 1.1946226280981044E-4 78-79 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 4.9839997365003805 1.1946226280981044E-4 80-81 1.7066037544258635E-5 3.413207508851727E-5 1.7066037544258635E-5 5.49730348073782 1.3652830035406908E-4 82-83 1.7066037544258635E-5 5.11981126327759E-5 1.7066037544258635E-5 6.036888922793417 1.7066037544258636E-4 84-85 3.413207508851727E-5 5.11981126327759E-5 1.7066037544258635E-5 6.587686751515593 1.7066037544258636E-4 86 3.413207508851727E-5 5.11981126327759E-5 1.7066037544258635E-5 7.0163941476461416 1.7066037544258636E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9725 0.0 41.546417 1 GGTATCA 5400 0.0 40.649323 1 TCAACGC 12625 0.0 31.695276 4 TATCAAC 13045 0.0 30.499762 2 ATCAACG 13250 0.0 30.270079 3 CAACGCA 13170 0.0 30.242579 5 AACGCAG 14140 0.0 28.622492 6 GTACATG 24005 0.0 26.627426 1 TACATGG 24655 0.0 25.566525 2 ACATGGG 26660 0.0 23.53996 3 ACGCAGA 16850 0.0 23.087881 7 CGCAGAG 17775 0.0 21.702587 8 CATGGGG 20525 0.0 20.615044 4 AGTACAT 17440 0.0 20.126556 2 GAGTACA 18720 0.0 19.83793 1 GCAGAGT 19235 0.0 18.789474 9 GTGTAGC 3660 0.0 17.728283 1 GTGGTAT 3300 0.0 17.431097 1 GTATAGG 1250 0.0 17.302805 1 AGAGTAC 16310 0.0 17.154234 10-11 >>END_MODULE