##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921562_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5859591 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.93426640187003 31.0 30.0 34.0 26.0 34.0 2 29.924288231038652 31.0 30.0 34.0 26.0 34.0 3 30.101822294422938 31.0 30.0 34.0 26.0 34.0 4 33.74225538949732 35.0 35.0 37.0 30.0 37.0 5 33.228481134604785 35.0 33.0 37.0 27.0 37.0 6 33.113225650049635 35.0 33.0 37.0 27.0 37.0 7 32.916916385461036 35.0 33.0 37.0 26.0 37.0 8 32.804145374651576 35.0 33.0 37.0 26.0 37.0 9 34.1150501801235 37.0 34.0 39.0 26.0 39.0 10-11 33.8974762061038 37.0 33.0 39.0 25.0 39.0 12-13 33.70850670294223 37.0 33.0 39.0 25.0 39.0 14-15 34.56109103860662 38.0 33.0 40.0 24.0 41.0 16-17 34.40706254071317 38.0 33.0 40.0 23.5 41.0 18-19 34.261950791446026 38.0 33.0 40.0 22.5 41.0 20-21 34.11231859015416 38.0 33.0 40.0 20.0 41.0 22-23 33.93178662128466 38.0 33.0 40.0 19.0 41.0 24-25 33.76047611514183 38.0 32.0 40.0 18.0 41.0 26-27 33.662134353745856 38.0 32.5 40.0 18.0 41.0 28-29 33.66935021574031 38.0 32.0 40.0 18.0 41.0 30-31 33.504377694620665 38.0 32.0 40.0 17.0 41.0 32-33 33.329953745918445 38.0 32.0 40.0 16.0 41.0 34-35 33.11583299926565 38.0 32.0 40.0 16.0 41.0 36-37 32.932366098589476 38.0 31.0 40.0 15.0 41.0 38-39 32.7375236599278 37.5 31.0 40.0 13.5 41.0 40-41 32.740347235839494 38.0 31.0 40.0 11.0 41.0 42-43 32.52312251827816 37.0 31.0 40.0 9.0 41.0 44-45 32.30584805321736 37.0 31.0 40.0 8.5 41.0 46-47 32.02241504569176 37.0 30.0 40.0 7.5 41.0 48-49 31.712236826768283 37.0 30.0 40.0 4.0 41.0 50-51 31.420074455708598 36.0 30.0 40.0 2.0 41.0 52-53 31.078125759971982 36.0 29.0 39.0 2.0 41.0 54-55 30.73549186282797 35.5 28.5 39.0 2.0 40.0 56-57 30.371802741863725 35.0 28.0 39.0 2.0 40.0 58-59 29.874042744621597 35.0 28.0 38.5 2.0 40.0 60-61 29.501498056775635 34.0 27.0 38.0 2.0 40.0 62-63 29.147233655045206 34.0 26.5 38.0 2.0 40.0 64-65 28.675314966522407 34.0 26.0 37.0 2.0 40.0 66-67 28.24069205512808 34.0 26.0 37.0 2.0 39.0 68-69 27.79897709584167 33.0 25.5 36.0 2.0 39.0 70-71 27.329614046441126 33.0 24.5 36.0 2.0 39.0 72-73 26.850878670542023 32.5 24.0 35.0 2.0 38.0 74-75 26.32118120530938 32.0 22.5 35.0 2.0 37.0 76-77 24.876631150535935 30.5 20.0 34.0 2.0 35.5 78-79 25.74116836823594 31.5 21.5 34.5 2.0 36.0 80-81 25.7975946614704 32.0 21.5 35.0 2.0 36.0 82-83 25.48454644701311 32.0 20.0 35.0 2.0 35.5 84-85 25.066471277602822 32.0 19.0 34.5 2.0 35.0 86-87 24.62633262287419 31.0 17.5 34.0 2.0 35.0 88-89 24.183648568645832 31.0 11.5 34.0 2.0 35.0 90-91 23.755934074579606 31.0 7.0 34.0 2.0 35.0 92-93 23.34381205104588 31.0 2.0 34.0 2.0 35.0 94-95 22.953732094953384 31.0 2.0 34.0 2.0 35.0 96-97 22.41046593525043 30.0 2.0 34.0 2.0 35.0 98-99 21.636331528941184 30.0 2.0 34.0 2.0 35.0 100-101 19.071473247876856 25.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 175734.0 3 77038.0 4 40293.0 5 29123.0 6 25219.0 7 25030.0 8 28357.0 9 32543.0 10 35897.0 11 40322.0 12 44161.0 13 47693.0 14 51362.0 15 54088.0 16 56986.0 17 58614.0 18 57752.0 19 56980.0 20 57342.0 21 59571.0 22 64261.0 23 71208.0 24 81840.0 25 96055.0 26 112856.0 27 133202.0 28 156502.0 29 182896.0 30 213689.0 31 251963.0 32 299113.0 33 362589.0 34 450652.0 35 567675.0 36 716094.0 37 725777.0 38 305960.0 39 13154.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.20020296395114 18.083191611553275 13.63310775890606 25.083497665589515 2 16.49929150345135 19.559709884188162 37.61240332303057 26.32859528932992 3 20.38946062959002 22.87342239415686 27.546871445464365 29.190245530788754 4 14.667628195554494 15.343833342578803 33.87726851832096 36.111269943545736 5 15.753450144027681 36.194388553161886 32.58898548389409 15.46317581891634 6 35.88273915479155 32.97445315021321 16.19097018096233 14.951837514032906 7 31.73861907566274 30.154848041857917 18.9824203175506 19.12411256492875 8 28.278485162525858 33.65570318590639 18.518284917176075 19.547526734391685 9 27.560594114044136 15.717711258250992 18.111132847037076 38.6105617806678 10-11 27.08318862933726 24.482882382285275 25.890562856041242 22.543366132336214 12-13 27.465851929051478 21.40631066908029 26.324920895846954 24.802916506021276 14-15 24.600416689057134 23.102774330334277 23.502035133139476 28.794773847469113 16-17 25.08403928955269 26.149194481509646 24.203298312621886 24.563467916315773 18-19 25.084208452502143 25.492246793298236 25.51731099308971 23.90623376110991 20-21 25.781480118606197 24.48091859185449 25.32997914231634 24.407622147222973 22-23 25.543775023027887 24.238115465501547 25.213476605833414 25.00463290563715 24-25 25.20723064371427 24.517107981618363 25.174652714147154 25.101008660520215 26-27 25.054289456115097 24.753857633392926 25.24242005132697 24.949432859165004 28-29 25.047924140700378 24.89576003321682 25.156416492168827 24.899899333913975 30-31 25.355182329190978 24.67650694334368 25.0096860342111 24.958624693254244 32-33 25.045815140730248 24.72816520562436 24.987238003467166 25.238781650178222 34-35 25.295981963162266 24.78865748576146 25.176814877830044 24.738545673246225 36-37 25.31530438741929 24.73988652465076 25.002195941865292 24.942613146064662 38-39 25.377801725352167 24.657897688655016 25.024000215801333 24.940300370191483 40-41 25.305681943295788 24.63087809678413 25.03406707924405 25.029372880676032 42-43 25.157053022322668 24.568976444586063 25.002136093527522 25.271834439563744 44-45 25.042975731662793 24.619013375177666 25.135899923171973 25.20211096998757 46-47 25.146456646673066 24.527656882290877 25.062781766814336 25.263104704221718 48-49 25.038654713571134 24.643992647924676 25.056471720621136 25.260880917883057 50-51 25.022176849127614 24.744908627285042 25.034671329451964 25.19824319413538 52-53 25.120255274766244 24.64378265700773 25.068609104284555 25.167352963941465 54-55 24.895529541729637 24.48835846962599 25.218755558074175 25.397356430570202 56-57 24.98910634477544 24.63049899170751 25.01251511585336 25.36787954766369 58-59 25.02367685668969 24.54935461897968 25.105447136307863 25.32152138802276 60-61 25.203208174095586 24.515543535719374 25.064579257696394 25.216669032488642 62-63 24.950546541893495 24.559049421710945 25.120991248792517 25.36941278760304 64-65 24.833455274252707 24.399665353038806 25.185298849414245 25.581580523294246 66-67 24.846963152647852 24.612208180657934 25.046165489490797 25.49466317720342 68-69 24.870615831409637 24.478116646091813 24.998958163252063 25.652309359246487 70-71 24.809233186336506 24.292179258450055 25.119248731073657 25.77933882413978 72-73 24.777880003975213 24.450736250604905 24.963483732203333 25.80790001321655 74-75 24.60402796977849 24.487778908747686 25.068144897364554 25.840048224109267 76-77 24.61993801601649 24.157683709952998 25.32718282812059 25.89519544590992 78-79 24.47974164349573 24.18669427452138 25.347431717144854 25.98613236483804 80-81 24.482515567354245 24.360064243419714 25.156970768629556 26.00044942059649 82-83 24.46402614651054 24.357232895905426 25.15344595979047 26.02529499779356 84-85 24.4462667951606 24.315320426413 25.130461998624643 26.107950779801758 86-87 24.21004607273844 24.30295920063081 25.31520708112755 26.17178764550321 88-89 24.168291337449546 24.14564302699295 25.292612059454385 26.39345357610312 90-91 24.193220881109355 24.06175365674236 25.346605327845324 26.39842013430296 92-93 24.14842709001127 24.118058695457968 25.32333055976079 26.41018365476997 94-95 23.98045795617316 24.060832133423695 25.373579073462118 26.58513083694103 96-97 23.768655484149768 24.03597704854157 25.47217124145292 26.723196225855745 98-99 23.76839047228296 23.947627389285106 25.44894563909174 26.83503649934019 100-101 24.0331413214083 23.63923569679268 25.469975234975884 26.857647746823133 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 91.0 1 76.0 2 77.0 3 102.5 4 103.5 5 118.5 6 221.0 7 477.5 8 697.5 9 740.5 10 655.0 11 546.0 12 561.0 13 607.0 14 664.5 15 776.0 16 904.0 17 995.0 18 1100.0 19 1202.0 20 1274.0 21 1436.5 22 1617.5 23 1817.5 24 2082.5 25 2440.5 26 2886.0 27 3499.0 28 4335.5 29 5680.0 30 7988.0 31 11712.5 32 17967.0 33 25833.5 34 34544.5 35 45148.5 36 59293.0 37 74587.5 38 87411.0 39 99619.5 40 112895.0 41 126506.0 42 141212.0 43 160414.5 44 180903.5 45 199671.0 46 217850.5 47 236204.0 48 255294.5 49 270003.5 50 279116.0 51 283224.0 52 285753.5 53 289351.5 54 287876.0 55 280697.5 56 266802.0 57 245414.5 58 223224.0 59 202063.0 60 177127.5 61 148852.5 62 121524.0 63 94900.0 64 70620.0 65 52118.5 66 38501.0 67 28373.0 68 21031.0 69 15677.5 70 11922.5 71 8949.5 72 6655.5 73 5209.0 74 3958.5 75 2862.5 76 2011.5 77 1242.5 78 698.5 79 414.5 80 262.0 81 159.5 82 84.5 83 46.5 84 26.0 85 14.5 86 11.0 87 5.0 88 3.5 89 3.0 90 2.0 91 1.0 92 0.5 93 0.0 94 0.0 95 0.5 96 0.5 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.24264492180426928 2 0.0 3 0.0 4 0.014779188513327978 5 0.016980707356537342 6 0.10894958368254713 7 0.13954898899940285 8 0.15646143220576317 9 0.11103164026294668 10-11 0.12162111655915916 12-13 0.09556981024784836 14-15 0.11989744676718904 16-17 0.07328156521504658 18-19 0.07895602269851257 20-21 0.05522569749322094 22-23 0.08079062173452037 24-25 0.07509056519473799 26-27 0.05155649942120533 28-29 0.01900303280553199 30-31 0.032945985479191295 32-33 0.0402246504918176 34-35 0.04588204193773934 36-37 0.03746848542841984 38-39 0.04013932030409631 40-41 0.02211758465735919 42-43 0.03303131566691259 44-45 0.017953471496560083 46-47 0.030710334560893414 48-49 3.5838678842943137E-4 50-51 0.01713430169443567 52-53 0.008405023490547378 54-55 0.017014839431625857 56-57 0.011536641379918838 58-59 0.008430622546863767 60-61 0.03185375907635874 62-63 0.013644297016634778 64-65 0.01500958002017547 66-67 0.05947514084174134 68-69 0.07759927271374402 70-71 0.033816353393948485 72-73 0.05626672578342072 74-75 0.04726439097882429 76-77 0.22598846916107285 78-79 0.08081622079083677 80-81 0.01598234416019821 82-83 0.010350551770592862 84-85 0.025044410096199548 86-87 0.1805416111807121 88-89 0.3841735711588061 90-91 0.2783385393280862 92-93 0.2789443836609074 94-95 0.0020820565803995536 96-97 0.006066976346983945 98-99 0.005239273526087401 100-101 0.005452598995390634 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 5859591.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.50012850942758 #Duplication Level Percentage of deduplicated Percentage of total 1 72.21509228681991 33.58011071657298 2 12.650680764496745 11.765165625616843 3 5.362829295775051 7.481167542829886 4 2.8398119421149937 5.282064810038173 5 1.7141017239453418 3.985297522084487 6 1.1073807459241745 3.089600819660393 7 0.7601034016492356 2.4741434099999755 8 0.5597120735341166 2.082134667809168 9 0.4073209159516318 1.7046427442695764 >10 2.168862419940508 18.381201961148047 >50 0.14916510562126903 4.718696302629739 >100 0.06338976581405355 4.8838502585286365 >500 0.0012913012188671695 0.39571738431922077 >1k 2.582571940984679E-4 0.17620623449275874 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.7066037544258635E-5 0.0 3 0.0 0.0 0.0 1.7066037544258635E-5 0.0 4 0.0 0.0 0.0 1.7066037544258635E-5 0.0 5 0.0 0.0 0.0 1.7066037544258635E-5 0.0 6 0.0 0.0 0.0 1.7066037544258635E-5 1.7066037544258635E-5 7 1.7066037544258635E-5 0.0 0.0 1.7066037544258635E-5 1.7066037544258635E-5 8 1.7066037544258635E-5 0.0 0.0 1.7066037544258635E-5 1.7066037544258635E-5 9 1.7066037544258635E-5 0.0 0.0 1.7066037544258635E-5 3.413207508851727E-5 10-11 1.7066037544258635E-5 0.0 0.0 3.413207508851727E-5 3.413207508851727E-5 12-13 1.7066037544258635E-5 0.0 0.0 5.11981126327759E-5 3.413207508851727E-5 14-15 1.7066037544258635E-5 0.0 0.0 5.11981126327759E-5 3.413207508851727E-5 16-17 1.7066037544258635E-5 0.0 0.0 8.533018772129318E-5 3.413207508851727E-5 18-19 1.7066037544258635E-5 0.0 0.0 1.535943378983277E-4 3.413207508851727E-5 20-21 1.7066037544258635E-5 0.0 0.0 1.7919339421471568E-4 3.413207508851727E-5 22-23 1.7066037544258635E-5 0.0 0.0 2.7305660070813816E-4 5.11981126327759E-5 24-25 1.7066037544258635E-5 8.533018772129318E-6 0.0 4.437169761507245E-4 6.826415017703454E-5 26-27 1.7066037544258635E-5 1.7066037544258635E-5 0.0 9.13033008617837E-4 6.826415017703454E-5 28-29 1.7066037544258635E-5 1.7066037544258635E-5 0.0 0.003464405621484503 6.826415017703454E-5 30-31 1.7066037544258635E-5 1.7066037544258635E-5 0.0 0.011963292318525304 6.826415017703454E-5 32-33 1.7066037544258635E-5 1.7066037544258635E-5 0.0 0.029976494946490292 6.826415017703454E-5 34-35 1.7066037544258635E-5 1.7066037544258635E-5 0.0 0.05418466920302117 6.826415017703454E-5 36-37 1.7066037544258635E-5 1.7066037544258635E-5 0.0 0.09672176778208583 6.826415017703454E-5 38-39 1.7066037544258635E-5 1.7066037544258635E-5 0.0 0.16664132360091344 6.826415017703454E-5 40-41 1.7066037544258635E-5 1.7066037544258635E-5 0.0 0.24881429437651875 8.533018772129318E-5 42-43 1.7066037544258635E-5 1.7066037544258635E-5 0.0 0.3301424962936833 9.386320649342249E-5 44-45 1.7066037544258635E-5 1.7066037544258635E-5 0.0 0.4295350989514456 1.023962252655518E-4 46-47 2.559905631638795E-5 1.7066037544258635E-5 0.0 0.5459169419845173 1.023962252655518E-4 48-49 3.413207508851727E-5 3.413207508851727E-5 0.0 0.6756700254335157 1.1946226280981044E-4 50-51 3.413207508851727E-5 3.413207508851727E-5 0.0 0.8137342691665681 1.1946226280981044E-4 52-53 3.413207508851727E-5 3.413207508851727E-5 0.0 0.9595038288508533 1.2799528158193976E-4 54-55 3.413207508851727E-5 3.413207508851727E-5 0.0 1.1248140015233146 1.3652830035406908E-4 56-57 4.266509386064659E-5 3.413207508851727E-5 0.0 1.3176175606795764 1.3652830035406908E-4 58-59 5.11981126327759E-5 3.413207508851727E-5 0.0 1.5291937611345228 1.535943378983277E-4 60-61 5.11981126327759E-5 3.413207508851727E-5 0.0 1.7617099896562747 1.6212735667045703E-4 62-63 5.11981126327759E-5 3.413207508851727E-5 0.0 1.998748718127255 1.7066037544258636E-4 64-65 5.11981126327759E-5 3.413207508851727E-5 0.0 2.253629988850758 1.7066037544258636E-4 66-67 5.11981126327759E-5 3.413207508851727E-5 0.0 2.5487188440285333 1.7919339421471568E-4 68-69 6.826415017703454E-5 3.413207508851727E-5 0.0 2.8807812695459463 1.8772641298684498E-4 70-71 6.826415017703454E-5 3.413207508851727E-5 0.0 3.2427007277470388 1.8772641298684498E-4 72-73 6.826415017703454E-5 3.413207508851727E-5 0.0 3.6178890301387927 1.8772641298684498E-4 74-75 6.826415017703454E-5 3.413207508851727E-5 0.0 4.008086912550722 1.8772641298684498E-4 76-77 6.826415017703454E-5 3.413207508851727E-5 0.0 4.437903601121648 1.8772641298684498E-4 78-79 6.826415017703454E-5 3.413207508851727E-5 0.0 4.918261359879896 1.8772641298684498E-4 80-81 6.826415017703454E-5 3.413207508851727E-5 0.0 5.4289710664106074 1.8772641298684498E-4 82-83 6.826415017703454E-5 6.826415017703454E-5 0.0 5.966457385848262 2.2185848807536226E-4 84-85 6.826415017703454E-5 6.826415017703454E-5 0.0 6.516751766462881 2.2185848807536226E-4 86-87 6.826415017703454E-5 6.826415017703454E-5 0.0 7.093575302440051 2.2185848807536226E-4 88-89 6.826415017703454E-5 6.826415017703454E-5 0.0 7.717262177513755 2.2185848807536226E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5135 0.0 44.676933 1 GTATCAA 9580 0.0 44.466644 1 TCAACGC 13120 0.0 32.07166 4 TATCAAC 13675 0.0 31.25517 2 CAACGCA 13535 0.0 30.878038 5 ATCAACG 13885 0.0 30.441477 3 AACGCAG 14435 0.0 29.079721 6 GTACATG 23565 0.0 26.863401 1 TACATGG 24805 0.0 25.214668 2 ACGCAGA 17475 0.0 23.504646 7 ACATGGG 26355 0.0 23.26402 3 CGCAGAG 18460 0.0 21.813177 8 CATGGGG 20455 0.0 20.478148 4 GAGTACA 18560 0.0 19.054064 1 AGTACAT 17685 0.0 18.985458 2 GCAGAGT 20350 0.0 18.781673 9 GTGGTAT 3045 0.0 18.132072 1 AGAGTAC 16430 0.0 18.060757 10-11 GTATAGG 1520 0.0 16.909351 1 GTATTAG 1215 0.0 16.453178 1 >>END_MODULE