##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921549_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2709934 Sequences flagged as poor quality 0 Sequence length 125 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38616770740542 33.0 31.0 34.0 28.0 34.0 2 31.458249536704585 33.0 31.0 34.0 28.0 34.0 3 31.542559339083535 34.0 31.0 34.0 28.0 34.0 4 35.05426220712386 37.0 35.0 37.0 32.0 37.0 5 34.712138376801796 37.0 35.0 37.0 32.0 37.0 6 34.69049725934285 37.0 35.0 37.0 31.0 37.0 7 34.54214604488523 37.0 35.0 37.0 31.0 37.0 8 34.51847683375315 37.0 35.0 37.0 31.0 37.0 9 36.137279727107746 39.0 37.0 39.0 31.0 39.0 10-11 35.99714365737321 39.0 37.0 39.0 30.0 39.0 12-13 35.90885589833553 39.0 37.0 39.0 30.0 39.0 14-15 37.11652202599768 40.0 37.0 41.0 31.0 41.0 16-17 37.088855300534995 40.0 37.0 41.0 31.0 41.0 18-19 37.08467881505601 40.0 37.0 41.0 30.5 41.0 20-21 37.05492569191722 40.0 37.0 41.0 30.0 41.0 22-23 36.98611331493682 40.0 37.0 41.0 30.0 41.0 24-25 36.912963378443905 40.0 37.0 41.0 30.0 41.0 26-27 36.790516853916 40.0 37.0 41.0 30.0 41.0 28-29 36.608902467735376 40.0 36.0 41.0 30.0 41.0 30-31 36.579284587742734 40.0 36.0 41.0 30.0 41.0 32-33 36.48300751974033 40.0 36.0 41.0 30.0 41.0 34-35 36.373654303019926 40.0 36.0 41.0 29.5 41.0 36-37 36.25309583185421 40.0 35.5 41.0 29.0 41.0 38-39 36.09480193982584 40.0 35.0 41.0 28.5 41.0 40-41 35.90901752588809 40.0 35.0 41.0 27.5 41.0 42-43 35.751437857896164 40.0 35.0 41.0 27.0 41.0 44-45 35.5642130029735 39.0 35.0 41.0 26.5 41.0 46-47 35.32769248254755 39.0 35.0 41.0 26.0 41.0 48-49 35.11235624188633 39.0 35.0 41.0 25.0 41.0 50-51 34.900465472590845 39.0 34.5 41.0 24.0 41.0 52-53 34.693518919648966 38.5 34.0 41.0 24.0 41.0 54-55 34.46371664402159 38.0 34.0 40.5 23.5 41.0 56-57 34.195449593975354 38.0 34.0 40.0 23.0 41.0 58-59 34.03592209256757 37.0 34.0 40.0 23.0 41.0 60-61 33.90614808331125 37.0 34.0 40.0 23.0 41.0 62-63 33.62424195570814 36.5 33.5 40.0 23.0 41.0 64-65 33.31783320184182 36.0 33.0 39.0 22.0 41.0 66-67 33.00969949821656 35.0 33.0 39.0 22.0 41.0 68-69 32.68482534999008 35.0 33.0 38.5 22.0 40.5 70-71 32.38061867927411 35.0 33.0 37.0 21.5 40.0 72-73 32.06755090714387 35.0 33.0 37.0 20.5 39.0 74-75 31.78533019623356 35.0 32.0 36.5 20.0 39.0 76-77 31.500764040747853 35.0 32.0 36.0 20.0 38.5 78-79 31.23291323700134 35.0 32.0 35.5 19.0 37.0 80-81 31.021429673194994 35.0 32.0 35.0 18.5 37.0 82-83 30.84815589604765 35.0 32.0 35.0 18.0 36.5 84-85 30.67153738799543 35.0 32.0 35.0 18.0 36.0 86-87 30.534432572896613 35.0 32.0 35.0 17.0 36.0 88-89 30.441936962302403 35.0 32.0 35.0 17.0 35.5 90-91 30.35562545065673 35.0 31.0 35.0 15.0 35.0 92-93 30.429922463056293 35.0 32.0 35.0 17.0 35.0 94-95 30.40723113551843 35.0 32.0 35.0 15.5 35.0 96-97 30.39287119169692 35.0 32.0 35.0 15.0 35.0 98-99 30.354649043113227 35.0 32.0 35.0 14.0 35.0 100-101 30.310206447832307 35.0 32.0 35.0 10.5 35.0 102-103 29.42195640189023 34.0 30.0 35.0 10.0 35.0 104-105 30.138730500447615 35.0 31.5 35.0 10.0 35.0 106-107 30.25044060113641 35.0 32.0 35.0 7.5 35.0 108-109 30.25773561274924 35.0 32.0 35.0 7.0 35.0 110-111 30.229068309412703 35.0 32.0 35.0 6.0 35.0 112-113 30.184045810709783 35.0 32.0 35.0 2.0 35.0 114-115 30.121681930261033 35.0 32.0 35.0 2.0 35.0 116-117 30.045629524556688 35.0 32.0 35.0 2.0 35.0 118-119 29.95187576524004 35.0 32.0 35.0 2.0 35.0 120-121 29.829946042966363 35.0 32.0 35.0 2.0 35.0 122-123 29.713581585381785 35.0 32.0 35.0 2.0 35.0 124-125 28.781961479504666 34.0 29.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 42063.0 3 16048.0 4 9251.0 5 7622.0 6 7848.0 7 9067.0 8 10496.0 9 11649.0 10 13018.0 11 13632.0 12 13920.0 13 15230.0 14 18308.0 15 15105.0 16 9418.0 17 8383.0 18 7606.0 19 6937.0 20 7053.0 21 7450.0 22 9096.0 23 12070.0 24 16533.0 25 23060.0 26 28878.0 27 33226.0 28 39385.0 29 46763.0 30 54968.0 31 66641.0 32 83430.0 33 108157.0 34 150670.0 35 244023.0 36 504029.0 37 803434.0 38 235154.0 39 313.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.03124958434876 17.130779769126978 12.320087667313482 25.51788297921079 2 16.989102164806326 19.380005727157055 37.37209841263281 26.25879369540381 3 19.062760672340865 23.796053651442787 28.742350535554785 28.398835140661564 4 13.771418845149997 15.320587161301733 34.67850825259441 36.22948574095386 5 14.930524155521063 36.658515474039525 33.06256609386852 15.34839427657089 6 34.46433949673129 34.075423868944625 16.700709548640845 14.759527085683239 7 30.225109698211355 30.786582955616193 20.39912470257197 18.589182643600484 8 28.34098772038269 33.01074812484431 19.108745191021395 19.539518963751604 9 28.121867873142865 14.015432759371471 18.355905558302766 39.5067938091829 10-11 26.855541423275405 24.194080225056922 26.62776834976526 22.322610001902415 12-13 27.216882746893123 21.835979534990827 26.89237492416403 24.054762793952015 14-15 24.64288923491197 22.877064444984452 24.159539396905018 28.320506923198558 16-17 24.79661917377387 25.860287009294797 24.60126065019494 24.741833166736388 18-19 24.871515397763012 25.01263488046268 26.175191497551165 23.94065822422314 20-21 25.909932459401553 24.002460920250574 25.8816621397864 24.205944480561477 22-23 25.808312340524154 23.63154316891652 25.72710282995123 24.83304166060809 24-25 25.132726313819813 24.149029183365485 25.72251647245659 24.995728030358112 26-27 24.9149014181344 24.218538804713447 25.873936186996744 24.992623590155414 28-29 25.09700980247424 24.25599368153769 25.798259470312086 24.848737045675986 30-31 25.206283425149167 24.19949887766979 25.663981551080095 24.93023614610095 32-33 24.93151514066684 24.264907647625122 25.626799082722695 25.17677812898534 34-35 25.193351241899254 24.265091805391613 25.717985116549624 24.823571836159505 36-37 25.297860922698987 24.174806586931986 25.590850072670612 24.936482417698414 38-39 25.329564873972533 24.308352987639008 25.4661669121148 24.895915226273654 40-41 25.325495869369856 24.23909493345045 25.49431934559452 24.941089851585176 42-43 25.220355909369125 24.207347036084542 25.445034331918453 25.12726272262788 44-45 25.186534112047433 24.243123261623133 25.303016434489393 25.267326191840038 46-47 25.33983178601093 24.395586509590174 25.096278214282485 25.168303490116408 48-49 25.428027854267988 24.48208781886052 24.84524227613949 25.244642050732004 50-51 25.325966606138444 24.73528130859058 24.7526831716787 25.186068913592273 52-53 25.478226094139483 24.57301389892886 24.81748578373936 25.13127422319229 54-55 25.330375501445513 24.516399653504795 24.908310533225414 25.244914311824278 56-57 25.278094789556672 24.589621485475366 24.807738302634455 25.32454542233351 58-59 25.32087764131682 24.46129168936505 24.924966155417863 25.29286451390027 60-61 25.33037346854864 24.52427844529959 25.0513590304419 25.093989055709876 62-63 25.192563612845316 24.651538155896016 24.938863348256625 25.217034883002043 64-65 25.26127752080467 24.400652905456965 25.00057669009412 25.337492883644234 66-67 25.257133662264636 24.618271520008797 24.925735805103592 25.198859012622975 68-69 25.271984565487237 24.562305550644403 24.804937006621383 25.360772877246973 70-71 25.15477059554293 24.384294632134264 25.07617658500074 25.38475818732206 72-73 25.334653425149224 24.604272336294926 24.800902042236174 25.260172196319676 74-75 25.184413931676236 24.784804277266428 24.798571193410776 25.23221059764656 76-77 25.280351912002807 24.46253811992511 24.795454285430633 25.46165568264145 78-79 25.156856147847407 24.51926209183488 24.8501849605984 25.473696799719313 80-81 25.1301620039892 24.717087264829942 24.687393423284696 25.465357307896163 82-83 25.206023222221646 24.616684245838755 24.72743672051626 25.44985581142334 84-85 25.167707273235575 24.630534690627528 24.650740942017286 25.55101709411961 86-87 24.98508059798661 24.68145185249703 24.763753068303735 25.569714481212625 88-89 25.051036471284306 24.5560629777691 24.75413726679258 25.63876328415402 90-91 24.964745029335162 24.53555889600734 24.780618309997944 25.719077764659552 92-93 24.964438004217804 24.627205660248194 24.788274883848036 25.620081451685966 94-95 24.95978808036959 24.416721884824057 24.89181023848893 25.731679796317426 96-97 24.935886755501727 24.499866874722194 24.840973875525005 25.72327249425107 98-99 24.884487547608177 24.53923253456517 24.741861358487697 25.83441855933895 100-101 24.825767512376377 24.52219849586544 24.857598802479185 25.794435189279003 102-103 24.828670380299908 24.335503822188436 24.97598562274087 25.85984017477079 104-105 24.711096432192466 24.57151344674028 24.82305803902973 25.894332082037526 106-107 24.758872700468924 24.47635591727085 24.81557163429649 25.949199747963736 108-109 24.7311421165932 24.44974906597549 24.825536493161252 25.99357232427006 110-111 24.702536466128787 24.529578820271656 24.839644239370134 25.92824047422942 112-113 24.696382796083054 24.469048169107438 24.86915342208733 25.965415612722175 114-115 24.535308783023797 24.625903735390413 24.877410822092916 25.961376659492874 116-117 24.508252304915953 24.608798583605733 24.846611106959358 26.036338004518957 118-119 24.5311616871481 24.422291517777484 24.85841803524773 26.188128759826686 120-121 24.367715605887778 24.442037967877535 25.014253730048928 26.17599269618576 122-123 24.315249020400504 24.512783365194803 24.89750115179166 26.274466462613038 124-125 24.28515667173265 24.55192816455492 24.889512678335958 26.273402485376472 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 16.0 1 20.5 2 37.5 3 53.5 4 51.0 5 53.5 6 83.5 7 168.5 8 272.0 9 319.0 10 304.0 11 295.0 12 357.5 13 450.0 14 549.5 15 662.5 16 806.5 17 948.0 18 1101.0 19 1291.0 20 1511.5 21 1700.5 22 1916.0 23 2260.5 24 2626.5 25 3144.0 26 4038.0 27 5100.0 28 6180.5 29 7766.0 30 9939.5 31 12079.0 32 14690.0 33 17521.0 34 20810.5 35 24808.5 36 29680.0 37 34942.0 38 39532.0 39 45211.0 40 51347.5 41 56715.0 42 62237.5 43 70214.0 44 78292.0 45 84763.0 46 92789.0 47 100337.5 48 108115.0 49 115090.0 50 116971.5 51 118099.5 52 118993.0 53 120230.0 54 123106.5 55 123089.0 56 117867.0 57 108484.0 58 101197.0 59 95104.0 60 85521.0 61 74907.5 62 63672.0 63 50127.0 64 38099.0 65 30079.0 66 23437.5 67 18223.0 68 14667.5 69 11741.0 70 9689.5 71 7796.5 72 6236.0 73 5515.5 74 4464.5 75 3426.5 76 2479.0 77 1524.5 78 882.5 79 494.0 80 278.5 81 144.0 82 85.5 83 38.5 84 25.0 85 14.0 86 10.5 87 8.5 88 2.0 89 4.0 90 4.5 91 2.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12317643160313128 2 0.0014022481728337296 3 0.021919353017453562 4 0.055831618039406124 5 0.02653201148072241 6 0.02236216822992737 7 0.016790076806298602 8 0.005867301565277974 9 0.004206744518501188 10-11 0.008099828261500096 12-13 0.005092374943448807 14-15 0.0035240710659373994 16-17 0.011088830945698309 18-19 0.00640236994701716 20-21 0.013967129826778068 22-23 0.010184749886897614 24-25 0.015166421027227968 26-27 0.010424608126987596 28-29 0.015277124830346421 30-31 0.022712730273135803 32-33 0.01452064884237033 34-35 0.022731180906988877 36-37 0.016531767932355546 38-39 0.02228836569451507 40-41 0.011033479044139082 42-43 0.010461509394693745 44-45 0.018819646530136895 46-47 0.01728824392033164 48-49 0.022823434076254253 50-51 0.016753175538592454 52-53 0.02304484168249116 54-55 0.01907795540407995 56-57 0.02236216822992737 58-59 0.018081621176013883 60-61 0.02125513019874285 62-63 0.02341385435955267 64-65 0.018690492093165367 66-67 0.012952344964858923 68-69 0.02512976330788868 70-71 0.016236557790706343 72-73 0.019428517447288386 74-75 0.01992668456132142 76-77 0.014502198208517255 78-79 0.031126219310138183 80-81 0.02280498344240118 82-83 0.010627565099371425 84-85 0.013893327291365767 86-87 0.013837975389806542 88-89 0.022030056820572016 90-91 0.01428079060228035 92-93 0.008468840938561603 94-95 0.008395038403149301 96-97 0.0029705520503451378 98-99 0.001955767188425991 100-101 0.012398825949266662 102-103 0.003653225502908927 104-105 0.002822946979520535 106-107 2.3985824008998004E-4 108-109 0.020535555478472908 110-111 8.118278895353171E-4 112-113 0.01003714481607301 114-115 0.0025830887394305544 116-117 0.008727149812504659 118-119 0.010498410662399897 120-121 0.004317448321619641 122-123 9.409823265068448E-4 124-125 0.02533272028027251 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2709934.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.94212625923647 #Duplication Level Percentage of deduplicated Percentage of total 1 75.87381457665843 38.6517344193403 2 11.89679248654278 12.12095809858796 3 4.342406558551012 6.636342695239265 4 2.1612900328221145 4.404028389394139 5 1.2807661604957787 3.2622475728266735 6 0.8596774476633431 2.62762782486505 7 0.5881038869308478 2.0971483723105284 8 0.45163353040789994 1.840573786315516 9 0.3470626334128391 1.5912097642061955 >10 2.036190860771399 18.97500862459036 >50 0.12295961935243907 4.233936844931773 >100 0.038647020436407574 3.2143665994019 >500 3.639921970571452E-4 0.10906719945587735 >1k 2.911937576256117E-4 0.23574980853440855 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.690126770615078E-5 2 0.0 0.0 0.0 0.0 3.690126770615078E-5 3 0.0 0.0 0.0 0.0 3.690126770615078E-5 4 0.0 0.0 0.0 0.0 3.690126770615078E-5 5 0.0 0.0 0.0 0.0 3.690126770615078E-5 6 0.0 0.0 0.0 0.0 3.690126770615078E-5 7 0.0 0.0 0.0 0.0 3.690126770615078E-5 8 0.0 0.0 0.0 0.0 3.690126770615078E-5 9 0.0 0.0 0.0 0.0 7.380253541230155E-5 10-11 0.0 0.0 0.0 0.0 7.380253541230155E-5 12-13 0.0 0.0 0.0 0.0 1.476050708246031E-4 14-15 0.0 0.0 0.0 0.0 2.5830887394305546E-4 16-17 0.0 0.0 0.0 1.845063385307539E-5 3.32111409355357E-4 18-19 0.0 0.0 0.0 3.690126770615078E-5 3.505620432084324E-4 20-21 0.0 0.0 0.0 3.690126770615078E-5 3.8746331091458314E-4 22-23 0.0 0.0 0.0 7.380253541230155E-5 4.981671140330355E-4 24-25 0.0 0.0 0.0 2.0295697238382929E-4 5.535190155922617E-4 26-27 0.0 0.0 0.0 2.5830887394305546E-4 6.088709171514879E-4 28-29 0.0 0.0 0.0 0.0012177418343029757 6.64222818710714E-4 30-31 0.0 0.0 0.0 0.004391250857031943 6.64222818710714E-4 32-33 0.0 0.0 0.0 0.010627565099371423 6.64222818710714E-4 34-35 0.0 0.0 0.0 0.018782745262430747 6.64222818710714E-4 36-37 0.0 0.0 0.0 0.030701854731517448 6.64222818710714E-4 38-39 0.0 0.0 0.0 0.050536286123573484 7.011240864168648E-4 40-41 0.0 0.0 0.0 0.07326746703056236 7.195747202699402E-4 42-43 0.0 0.0 0.0 0.09548203018966514 7.380253541230155E-4 44-45 0.0 0.0 0.0 0.12221699864277137 7.564759879760909E-4 46-47 0.0 0.0 0.0 0.15319561288208494 7.933772556822417E-4 48-49 0.0 0.0 0.0 0.18651745762073912 8.487291572414679E-4 50-51 0.0 0.0 0.0 0.22140760623690467 8.856304249476186E-4 52-53 0.0 0.0 0.0 0.2567590206993971 0.0010332354957722216 54-55 0.0 0.0 0.0 0.2956898581293862 0.001236192468156051 56-57 0.0 0.0 0.0 0.34104151614024547 0.0013099950035683526 58-59 0.0 0.0 0.0 0.38971428824465837 0.0013468962712745035 60-61 0.0 0.0 0.0 0.441025500990061 0.0014206988066868048 62-63 0.0 0.0 0.0 0.49624824811231566 0.0015498532436583326 64-65 0.0 0.0 0.0 0.5542201396786786 0.001568303877511408 66-67 0.0 0.0 0.0 0.6207715759867214 0.0015867545113644834 68-69 0.0 0.0 0.0 0.6961424152765344 0.0015867545113644834 70-71 0.0 0.0 0.0 0.7787828043044591 0.0016052051452175589 72-73 0.0 0.0 0.0 0.8671428898268372 0.0018081621176013881 74-75 0.0 0.0 0.0 0.9607798566311947 0.0018081621176013881 76-77 0.0 0.0 0.0 1.060929897185688 0.0018635140191606142 78-79 0.0 0.0 0.0 1.1743090422128362 0.0018819646530136896 80-81 0.0 0.0 0.0 1.3021719348146485 0.0019188659207198403 82-83 0.0 0.0 0.0 1.4377471923670466 0.002103372259250594 84-85 0.0 0.0 0.0 1.5774184906348272 0.00215872416080982 86-87 0.0 0.0 0.0 1.7300974857690261 0.0021956254285159715 88-89 0.0 0.0 0.0 1.9021680970828072 0.0022140760623690467 90-91 0.0 0.0 0.0 2.09416539295791 0.0022140760623690467 92-93 0.0 0.0 0.0 2.3026944567653675 0.002287878597781348 94-95 0.0 0.0 0.0 2.518363915873966 0.002324779865487499 96-97 0.0 0.0 0.0 2.7419486969055336 0.002472384936312102 98-99 0.0 0.0 0.0 2.984611433341181 0.002564638105577479 100-101 0.0 0.0 0.0 3.2651348704433394 0.0025830887394305544 102-103 0.0 0.0 0.0 3.567374703590567 0.002693792542549007 104-105 0.0 0.0 0.0 3.8779911245070915 0.0027306938102551574 106-107 0.0 0.0 0.0 4.202999039829014 0.0027306938102551574 108-109 0.0 0.0 0.0 4.543726895193757 0.002859848247226685 110-111 0.0 0.0 0.0 4.921189962559973 0.003099706487316665 112-113 0.0 0.0 0.0 5.32942868719312 0.003173509022728967 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3060 0.0 72.85021 1 GTATCAA 6060 0.0 61.276794 1 TCAACGC 8140 0.0 44.688923 4 CAACGCA 8360 0.0 43.347244 5 AACGCAG 8660 0.0 41.83789 6 ATCAACG 8840 0.0 41.420364 3 TATCAAC 8955 0.0 41.155148 2 GTACATG 12970 0.0 37.95952 1 TACATGG 13530 0.0 36.17205 2 ACGCAGA 10335 0.0 35.17103 7 ACATGGG 13895 0.0 34.878433 3 CGCAGAG 11265 0.0 32.26683 8 CATGGGG 12510 0.0 32.26677 4 GCAGAGT 12155 0.0 29.512136 9 ATGGGGG 6500 0.0 29.019934 5 AGAGTAC 10840 0.0 27.385305 10-11 CAGAGTA 11620 0.0 24.830297 10-11 GTATAGG 795 0.0 23.24209 1 TACCGTA 310 3.3833203E-10 23.028936 7 ACCGTAT 355 7.8216544E-11 21.785187 8 >>END_MODULE