##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921541_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2134988 Sequences flagged as poor quality 0 Sequence length 125 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34236398518399 31.0 31.0 34.0 28.0 34.0 2 31.39270478335241 33.0 31.0 34.0 28.0 34.0 3 31.47069772757505 33.0 31.0 34.0 28.0 34.0 4 34.98400834103049 37.0 35.0 37.0 32.0 37.0 5 34.65808051380148 37.0 35.0 37.0 32.0 37.0 6 34.63907197604858 37.0 35.0 37.0 31.0 37.0 7 34.49294703295756 37.0 35.0 37.0 30.0 37.0 8 34.456293899544164 37.0 35.0 37.0 30.0 37.0 9 36.028983301077105 39.0 37.0 39.0 30.0 39.0 10-11 35.90989504390657 39.0 37.0 39.0 30.0 39.0 12-13 35.812219319265495 39.0 37.0 39.0 30.0 39.0 14-15 37.005030707432546 40.0 37.0 41.0 30.0 41.0 16-17 37.00146886071491 40.0 37.0 41.0 30.0 41.0 18-19 37.02616665761119 40.0 37.0 41.0 30.0 41.0 20-21 37.014614133662576 40.0 37.0 41.0 30.0 41.0 22-23 36.95921148034556 40.0 37.0 41.0 30.0 41.0 24-25 36.89861886811542 40.0 37.0 41.0 30.0 41.0 26-27 36.78054232623322 40.0 36.5 41.0 30.0 41.0 28-29 36.58635271017917 40.0 36.0 41.0 30.0 41.0 30-31 36.52771139697272 40.0 36.0 41.0 30.0 41.0 32-33 36.392518365442804 40.0 35.5 41.0 30.0 41.0 34-35 36.25904407893627 40.0 35.0 41.0 29.0 41.0 36-37 36.11124441917238 40.0 35.0 41.0 29.0 41.0 38-39 35.92985229893564 40.0 35.0 41.0 28.0 41.0 40-41 35.70849484868299 39.5 35.0 41.0 27.0 41.0 42-43 35.52107342055318 39.0 35.0 41.0 26.5 41.0 44-45 35.283803702877954 39.0 35.0 41.0 25.5 41.0 46-47 34.98160177012704 39.0 35.0 41.0 24.5 41.0 48-49 34.698676058132406 39.0 34.0 41.0 23.0 41.0 50-51 34.45822739987297 38.5 34.0 41.0 23.0 41.0 52-53 34.242339067011144 38.0 34.0 40.5 22.5 41.0 54-55 34.013779936936416 38.0 33.5 40.0 22.0 41.0 56-57 33.74531988001806 37.5 33.0 40.0 21.5 41.0 58-59 33.584830921766304 37.0 33.0 40.0 21.5 41.0 60-61 33.4547873336993 37.0 33.0 40.0 21.0 41.0 62-63 33.18581088043586 36.0 33.0 39.5 20.0 41.0 64-65 32.8859131760928 35.5 33.0 39.0 20.0 41.0 66-67 32.57954658293161 35.0 33.0 39.0 19.5 41.0 68-69 32.26509961648496 35.0 32.5 38.5 18.5 40.5 70-71 31.96620285453595 35.0 32.0 37.0 18.0 40.0 72-73 31.667961599784167 35.0 32.0 37.0 17.5 39.0 74-75 31.389791183838035 35.0 32.0 36.0 16.5 39.0 76-77 31.1153936228213 35.0 32.0 36.0 14.0 38.5 78-79 30.858461499549414 35.0 32.0 35.0 12.5 37.0 80-81 30.652403901099213 35.0 31.0 35.0 11.0 37.0 82-83 30.483968996547052 35.0 31.0 35.0 10.0 36.0 84-85 30.30971415296011 35.0 31.0 35.0 7.5 36.0 86-87 30.179447378626953 35.0 31.0 35.0 7.0 36.0 88-89 30.08447190335496 35.0 31.0 35.0 7.0 35.5 90-91 29.993051248999997 35.0 31.0 35.0 7.0 35.0 92-93 30.062387704286863 35.0 31.0 35.0 6.0 35.0 94-95 30.04057048564207 35.0 31.0 35.0 3.5 35.0 96-97 30.0286144465449 35.0 31.0 35.0 2.0 35.0 98-99 29.988352861936463 35.0 31.0 35.0 2.0 35.0 100-101 29.94078772339704 35.0 31.0 35.0 2.0 35.0 102-103 29.055079232295448 33.5 29.5 35.0 2.0 35.0 104-105 29.759890922103544 34.5 31.0 35.0 2.0 35.0 106-107 29.871873518727035 35.0 31.0 35.0 2.0 35.0 108-109 29.87955997879145 35.0 31.0 35.0 2.0 35.0 110-111 29.848380178249243 35.0 31.0 35.0 2.0 35.0 112-113 29.803923253901196 35.0 31.0 35.0 2.0 35.0 114-115 29.740057789551976 35.0 31.0 35.0 2.0 35.0 116-117 29.6666222479939 35.0 31.0 35.0 2.0 35.0 118-119 29.57629363724761 35.0 31.0 35.0 2.0 35.0 120-121 29.468185769662405 35.0 31.0 35.0 2.0 35.0 122-123 29.347886264466123 35.0 31.0 35.0 2.0 35.0 124-125 28.432368706522006 34.0 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 31604.0 3 11579.0 4 6788.0 5 5694.0 6 6364.0 7 7553.0 8 8872.0 9 9949.0 10 11468.0 11 12657.0 12 13420.0 13 15352.0 14 19981.0 15 16568.0 16 8777.0 17 7396.0 18 6444.0 19 6071.0 20 5776.0 21 6023.0 22 7133.0 23 9962.0 24 14241.0 25 19951.0 26 24647.0 27 26973.0 28 32147.0 29 38376.0 30 44563.0 31 53233.0 32 66805.0 33 86742.0 34 121199.0 35 196231.0 36 393861.0 37 604601.0 38 175655.0 39 332.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.247714424391354 17.188700967691258 12.615673925328094 24.947910682589296 2 17.083389735876843 19.40756485746043 37.34778924668529 26.16125615997744 3 19.391860679754018 23.933017815128572 28.742156161834416 27.932965343282994 4 13.73247852432972 15.214662973741804 34.55490413860653 36.497954363321945 5 14.815307633201522 36.76305777844412 32.64271256957589 15.778922018778463 6 34.273828012452476 34.17666308271434 16.416609862193518 15.132899042639664 7 30.015398518050745 31.26915738203644 19.93431152415347 18.781132575759347 8 28.443264253437327 32.997263066480365 18.741975510464098 19.81749716961821 9 28.084888324927782 14.195144594662324 18.425789697779614 39.29417738263028 10-11 27.00520863219712 24.43009872253957 26.013205319507975 22.55148732575534 12-13 27.327776256741902 22.06060728131453 26.622653171109977 23.98896329083359 14-15 24.673003046249264 22.97654643346204 24.384655072636193 27.965795447652503 16-17 24.59265588410408 26.02149298533828 24.698312630607056 24.687538499950577 18-19 24.67108460400753 24.623587288612942 26.952243885130507 23.753084222249026 20-21 25.749355466814883 23.632532114230465 26.783700354783107 23.834412064171545 22-23 25.430875579274876 23.175843330065238 26.759794095975188 24.6334869946847 24-25 24.90619106198745 23.78139730111334 26.693924741106066 24.618486895793144 26-27 24.548861094865703 23.833147171515346 26.818497263081664 24.799494470537287 28-29 24.702147907967483 23.940691215948593 26.735845569677775 24.621315306406153 30-31 24.95510046322595 23.875450195890114 26.633723551906492 24.535725788977448 32-33 24.601012841932526 23.870179532217026 26.580015379307454 24.948792246542993 34-35 24.875403842405888 23.97758065604246 26.638396136605554 24.508619364946107 36-37 25.026602840150368 23.861254389205115 26.412691036265823 24.699451734378695 38-39 25.117117345032536 23.978632980160032 26.235433094659673 24.668816580147755 40-41 25.09649832861147 23.945919713390595 26.317225607471034 24.640356350526897 42-43 25.100906016933333 24.032530699248895 26.139676458994554 24.726886824823218 44-45 25.019137307959337 24.017766542645045 25.95023644062 25.012859708775615 46-47 25.095550263408832 24.221245150459602 25.72449433959701 24.958710246534554 48-49 25.51339129897029 24.448355878215004 24.982161956782978 25.056090866031727 50-51 25.25311698414085 24.800791516865527 24.927347081035613 25.018744417958004 52-53 25.532028031262033 24.563944091143767 25.0103772639067 24.893650613687495 54-55 25.261691314809127 24.59443936407043 25.192637788488202 24.951231532632242 56-57 25.164089797058047 24.534598702648207 24.997516985226532 25.303794515067214 58-59 25.239963777638174 24.40045947869219 25.16538281536574 25.1941939283039 60-61 25.251643403418615 24.533776587085097 25.288513545326495 24.92606646416979 62-63 25.075404570468017 24.6999746074699 25.171961774403766 25.05265904765831 64-65 25.225359647857104 24.29604682496107 25.302892174040142 25.175701353141683 66-67 25.16045377230906 24.5262977420532 25.227183616453065 25.086064869184675 68-69 25.301531928370707 24.570846416427024 25.032233369595875 25.095388285606397 70-71 25.043238938467667 24.396762935375822 25.331529758976885 25.22846836717963 72-73 25.394679330510293 24.695783387934213 24.988744863746092 24.9207924178094 74-75 25.186256445716836 24.81887342432177 24.863964747720487 25.130905382240904 76-77 25.256759795379168 24.527844922892424 24.90799557779152 25.307399703936888 78-79 25.191034978763476 24.559585249461765 24.962856587304007 25.28652318447075 80-81 25.183222194815315 24.802851817417533 24.825925152910624 25.18800083485652 82-83 25.253977864255496 24.72563364183471 24.795102077143692 25.225286416766114 84-85 25.08089557461681 24.732485390780376 24.738879742389607 25.4477392922132 86-87 24.864981976516773 24.798579669885676 24.838280519882044 25.498157833715506 88-89 24.93347494113469 24.682459965500666 24.778054601144795 25.60601049221985 90-91 24.976905571425494 24.649976530813962 24.86693767877102 25.50618021898952 92-93 25.003413655135816 24.858576307898343 24.738588964771314 25.399421072194535 94-95 24.862505650372515 24.58376955380209 24.92164426425709 25.632080531568306 96-97 24.92455871679676 24.65937543399962 24.81265853793915 25.60340731126447 98-99 24.90042485862051 24.615640071374187 24.731099693177182 25.75283537682812 100-101 24.810016468167202 24.764507082764077 24.789615709193388 25.635860739875334 102-103 24.96127491368533 24.50875231448845 24.982516917487814 25.547455854338402 104-105 24.842014837478395 24.748405276703256 24.734985642396488 25.67459424342186 106-107 24.879542366379496 24.737035376862483 24.67267889252514 25.710743364232876 108-109 24.91905124759344 24.555926727646536 24.68616620196629 25.838855822793732 110-111 24.92242859789266 24.7151890063015 24.75069304301211 25.611689352793732 112-113 24.907496626127106 24.704338184558928 24.740102876774124 25.648062312539842 114-115 24.597763117957637 24.899528604136144 24.85390662764598 25.648801650260246 116-117 24.704979669155648 24.9371782647687 24.66448427155478 25.69335779452087 118-119 24.719061648691625 24.620081222035864 24.765062017350385 25.895795111922133 120-121 24.38373360719568 24.670235152355446 24.92399500209027 26.022036238358602 122-123 24.4259477450678 24.70719219026167 24.842908033370875 26.023952031299658 124-125 24.463697664580128 24.892022729689756 24.723667671284346 25.92061193444577 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 36.0 1 38.0 2 74.0 3 122.0 4 101.0 5 92.0 6 173.0 7 366.5 8 580.5 9 685.5 10 626.5 11 549.0 12 605.0 13 716.0 14 904.0 15 1121.0 16 1298.0 17 1505.0 18 1718.5 19 1908.0 20 2157.0 21 2430.0 22 2816.0 23 3182.0 24 3528.5 25 4168.5 26 5010.0 27 5914.5 28 6956.5 29 8280.5 30 9936.0 31 11654.0 32 13629.5 33 15503.5 34 17215.0 35 19691.5 36 22910.5 37 26201.0 38 29476.5 39 33798.0 40 38485.5 41 42300.0 42 46429.5 43 53337.5 44 60095.0 45 64468.5 46 70877.0 47 77678.5 48 84625.0 49 91738.0 50 92842.0 51 92547.5 52 92499.0 53 92959.0 54 94535.0 55 93511.5 56 89295.0 57 82297.0 58 77843.5 59 73345.5 60 65413.5 61 58409.5 62 51239.5 63 40334.0 64 30512.5 65 24457.5 66 18948.0 67 14397.5 68 11667.0 69 9584.0 70 8428.0 71 7227.5 72 5954.5 73 5584.0 74 4578.0 75 3365.0 76 2279.5 77 1313.5 78 839.5 79 565.0 80 291.0 81 94.5 82 53.0 83 33.0 84 19.5 85 12.5 86 4.5 87 3.0 88 3.5 89 2.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12145267327029471 2 0.0017330308179718105 3 0.02388772208555739 4 0.05517595415056197 5 0.029414685234764787 6 0.02215469126758558 7 0.017189792167450122 8 0.005480124478451401 9 0.004168641697283544 10-11 0.007798638680873149 12-13 0.005269350460049424 14-15 0.0031616102760296545 16-17 0.011475474335218746 18-19 0.0061124465336573315 20-21 0.014215536574444446 22-23 0.009695604846490942 24-25 0.015456761349478312 26-27 0.009203798803552994 28-29 0.015433342014100314 30-31 0.023442754713375438 32-33 0.014121859232932457 34-35 0.02304462601194948 36-37 0.01627643808770822 38-39 0.022646497310523525 40-41 0.011053926298414792 42-43 0.009578508169600953 44-45 0.019391209692981883 46-47 0.017728436881144064 48-49 0.023653528731777416 50-51 0.016510631441488195 52-53 0.02407507676858137 54-55 0.01929753235146989 56-57 0.022763593987413514 58-59 0.01850127494861798 60-61 0.021990755919939597 62-63 0.02351301271950943 64-65 0.018735468302397952 66-67 0.012224893067314663 68-69 0.025948623598821163 70-71 0.01583147071552627 72-73 0.019063338997689916 74-75 0.020187467095833793 76-77 0.014426310592846424 78-79 0.032459198833904454 80-81 0.022927529335059496 82-83 0.009625346840356949 84-85 0.013653472525372507 86-87 0.012786957116386603 88-89 0.021264756523221677 90-91 0.012833795787142596 92-93 0.008407541400701081 94-95 0.008103090040787115 96-97 0.0023185142024217467 98-99 0.0019906435071297825 100-101 0.01234198974420465 102-103 0.003138190940651657 104-105 0.0026463848977137105 106-107 2.341933537799744E-4 108-109 0.021475530541623652 110-111 9.133540797419002E-4 112-113 0.00941457282195497 114-115 0.002435610879311734 116-117 0.008313864059189092 118-119 0.01042160424320886 120-121 0.004473093057197511 122-123 5.85483384449936E-4 124-125 0.023934560756313384 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2134988.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.62257825781788 #Duplication Level Percentage of deduplicated Percentage of total 1 78.04774428484933 41.85121275760492 2 11.207415874718201 12.019410696199744 3 3.8625067946850278 6.213527186080537 4 1.9318197699405852 4.143566271745551 5 1.1371336515999744 3.048801911125892 6 0.7590403832387927 2.4421021410639745 7 0.5225370990734333 1.9613850541374818 8 0.40454473729276513 1.735418546741574 9 0.3040138961028181 1.4671808041713732 >10 1.6824373903554088 16.170259617766625 >50 0.09705868381896282 3.5261009069539737 >100 0.04068084630213487 3.8978651037581904 >500 0.0025408872189244926 0.9009342626409338 >1k 5.257008039154037E-4 0.6222347400091977 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3793 0.1776590781774886 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3383 0.1584552231675307 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.6838670755994883E-5 2 0.0 0.0 0.0 0.0 4.6838670755994883E-5 3 0.0 0.0 0.0 0.0 4.6838670755994883E-5 4 0.0 0.0 0.0 0.0 4.6838670755994883E-5 5 0.0 0.0 0.0 0.0 4.6838670755994883E-5 6 0.0 0.0 0.0 0.0 4.6838670755994883E-5 7 0.0 0.0 0.0 0.0 4.6838670755994883E-5 8 0.0 0.0 0.0 0.0 4.6838670755994883E-5 9 0.0 0.0 0.0 0.0 4.6838670755994883E-5 10-11 0.0 0.0 0.0 0.0 4.6838670755994883E-5 12-13 0.0 0.0 0.0 0.0 3.0445135991396676E-4 14-15 0.0 0.0 0.0 0.0 3.7470936604795907E-4 16-17 0.0 0.0 0.0 0.0 4.6838670755994883E-4 18-19 0.0 0.0 0.0 0.0 6.089027198279335E-4 20-21 0.0 0.0 0.0 0.0 6.323220552059309E-4 22-23 0.0 0.0 0.0 2.3419335377997442E-5 7.025800613399232E-4 24-25 0.0 0.0 0.0 9.367734151198977E-5 7.494187320959181E-4 26-27 0.0 0.0 0.0 1.4051601226798465E-4 7.494187320959181E-4 28-29 0.0 0.0 0.0 7.49418732095918E-4 7.494187320959181E-4 30-31 0.0 0.0 0.0 0.00302109426376167 7.728380674739155E-4 32-33 0.0 0.0 0.0 0.0077518000101171524 7.962574028519129E-4 34-35 0.0 0.0 0.0 0.014402891257468426 8.430960736079078E-4 36-37 0.0 0.0 0.0 0.02414533477471536 8.430960736079078E-4 38-39 0.0 0.0 0.0 0.039812870142595644 9.367734151198977E-4 40-41 0.0 0.0 0.0 0.05843124176810361 9.367734151198977E-4 42-43 0.0 0.0 0.0 0.07622993665538166 9.601927504978951E-4 44-45 0.0 0.0 0.0 0.09566798501911955 0.00100703142125389 46-47 0.0 0.0 0.0 0.11925125574476297 0.0010538700920098847 48-49 0.0 0.0 0.0 0.14192117239066449 0.0010772894273878822 50-51 0.0 0.0 0.0 0.16969650414896947 0.0011241280981438772 52-53 0.0 0.0 0.0 0.19779970660256638 0.0011943861042778695 54-55 0.0 0.0 0.0 0.22983735739966688 0.0012646441104118618 56-57 0.0 0.0 0.0 0.26482584445439505 0.0012880634457898593 58-59 0.0 0.0 0.0 0.30520077864606265 0.001381740787301849 60-61 0.0 0.0 0.0 0.35234390076197153 0.0014519987934358413 62-63 0.0 0.0 0.0 0.3971685086754586 0.0014988374641918363 64-65 0.0 0.0 0.0 0.44417111477909943 0.0015222567995698336 66-67 0.0 0.0 0.0 0.5001667456678913 0.0015690954703258286 68-69 0.0 0.0 0.0 0.5650148853295662 0.0015925148057038259 70-71 0.0 0.0 0.0 0.6379426956966503 0.0016159341410818234 72-73 0.0 0.0 0.0 0.7112217960944043 0.0018267081594838005 74-75 0.0 0.0 0.0 0.7868194106945801 0.0019672241717517847 76-77 0.0 0.0 0.0 0.8712226953968828 0.0020609015132637748 78-79 0.0 0.0 0.0 0.9688813239231321 0.002131159519397767 80-81 0.0 0.0 0.0 1.0769849760279684 0.0022014175255317594 82-83 0.0 0.0 0.0 1.1940816529179554 0.0022482561962877544 84-85 0.0 0.0 0.0 1.3130050379674265 0.002295094867043749 86-87 0.0 0.0 0.0 1.4442001547549683 0.0023185142024217467 88-89 0.0 0.0 0.0 1.59305345041752 0.002341933537799744 90-91 0.0 0.0 0.0 1.758440796856938 0.002341933537799744 92-93 0.0 0.0 0.0 1.9328680067522628 0.002341933537799744 94-95 0.0 0.0 0.0 2.1198245610748163 0.002341933537799744 96-97 0.0 0.0 0.0 2.316055172207057 0.002599546226957716 98-99 0.0 0.0 0.0 2.5269462872859236 0.002763481574603698 100-101 0.0 0.0 0.0 2.7678375709840055 0.002763481574603698 102-103 0.0 0.0 0.0 3.036269993086612 0.0028337395807376906 104-105 0.0 0.0 0.0 3.318496403726859 0.002880578251493685 106-107 0.0 0.0 0.0 3.6059453261564 0.0029039975868716825 108-109 0.0 0.0 0.0 3.9036753368168817 0.0029508362576276775 110-111 0.0 0.0 0.0 4.237377446617966 0.00302109426376167 112-113 0.0 0.0 0.0 4.595107794516878 0.003044513599139667 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2940 0.0 82.936905 1 GTATCAA 6550 0.0 65.533455 1 TCAACGC 9025 0.0 46.971466 4 CAACGCA 9140 0.0 46.29254 5 ATCAACG 9465 0.0 44.91371 3 AACGCAG 9580 0.0 44.156025 6 TATCAAC 9770 0.0 43.756382 2 ACGCAGA 11275 0.0 37.51442 7 GTACATG 11655 0.0 36.010754 1 CGCAGAG 12075 0.0 35.075794 8 TACATGG 12130 0.0 33.917885 2 ACATGGG 12195 0.0 33.394554 3 GCAGAGT 12750 0.0 32.70486 9 CATGGGG 10175 0.0 32.007683 4 AGAGTAC 11830 0.0 28.284422 10-11 ATGGGGG 5420 0.0 27.998096 5 CAGAGTA 12350 0.0 26.78042 10-11 GAGTACT 6925 0.0 24.482168 12-13 AGTACTT 7160 0.0 24.135588 12-13 GTGGTAT 1150 0.0 23.328485 1 >>END_MODULE