##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921539_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1239822 Sequences flagged as poor quality 0 Sequence length 125 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.005845193906868 31.0 30.0 34.0 26.0 34.0 2 30.123387066853144 31.0 31.0 34.0 26.0 34.0 3 30.290250535964034 31.0 31.0 34.0 26.0 34.0 4 33.6472412975411 37.0 35.0 37.0 28.0 37.0 5 33.71050602425187 37.0 35.0 37.0 28.0 37.0 6 33.68925861938246 37.0 35.0 37.0 28.0 37.0 7 33.52391311010774 37.0 35.0 37.0 27.0 37.0 8 33.520590859010404 37.0 35.0 37.0 27.0 37.0 9 34.98984934934208 39.0 35.0 39.0 27.0 39.0 10-11 34.88352360258166 39.0 35.0 39.0 27.0 39.0 12-13 34.74972778350441 39.0 35.0 39.0 26.5 39.0 14-15 35.94106129750884 40.0 36.0 41.0 27.0 41.0 16-17 35.87955851727103 40.0 36.0 41.0 27.0 41.0 18-19 35.89646215343815 40.0 36.0 41.0 26.5 41.0 20-21 35.923886654697206 40.0 36.0 41.0 26.5 41.0 22-23 35.90143020530367 40.0 36.0 41.0 26.5 41.0 24-25 35.874432781479925 40.0 36.0 41.0 27.0 41.0 26-27 35.80156748307418 40.0 36.0 41.0 26.5 41.0 28-29 35.7618383929306 40.0 35.5 41.0 27.0 41.0 30-31 35.66371503328703 40.0 35.0 41.0 26.0 41.0 32-33 35.55259585650198 40.0 35.0 41.0 26.0 41.0 34-35 35.38047477783101 40.0 35.0 41.0 25.0 41.0 36-37 35.24264491193091 40.0 35.0 41.0 25.0 41.0 38-39 35.11065983665397 40.0 35.0 41.0 24.5 41.0 40-41 34.94505380611088 39.0 35.0 41.0 24.0 41.0 42-43 34.746668473377625 39.0 34.0 41.0 23.5 41.0 44-45 34.53919554581222 39.0 34.0 41.0 22.5 41.0 46-47 34.2682356822189 39.0 33.0 41.0 21.0 41.0 48-49 34.096404967809896 38.5 33.0 41.0 20.0 41.0 50-51 33.88210807680457 38.0 33.0 40.5 18.5 41.0 52-53 33.679219678308655 38.0 33.0 40.0 18.0 41.0 54-55 33.46492641685661 38.0 33.0 40.0 17.5 41.0 56-57 33.20475519873014 37.0 33.0 40.0 14.5 41.0 58-59 32.95144544942742 37.0 32.5 40.0 14.0 41.0 60-61 32.61953611082882 36.0 32.0 40.0 12.0 41.0 62-63 32.30244381854814 35.5 32.0 39.0 8.5 41.0 64-65 31.986153254257466 35.0 31.5 39.0 8.0 41.0 66-67 31.937137347135312 35.0 32.0 39.0 7.5 41.0 68-69 31.6864682994817 35.0 32.0 37.5 7.0 40.0 70-71 31.39094240947491 35.0 31.5 37.0 4.0 39.5 72-73 31.073720663127446 35.0 31.0 37.0 2.0 39.0 74-75 30.781777545486367 35.0 31.0 36.0 2.0 39.0 76-77 30.5180788048607 35.0 31.0 36.0 2.0 38.0 78-79 30.255568138006907 35.0 31.0 35.0 2.0 37.0 80-81 30.027290611071592 35.0 31.0 35.0 2.0 37.0 82-83 29.848074159032507 35.0 31.0 35.0 2.0 36.0 84-85 29.666888069416416 35.0 30.0 35.0 2.0 36.0 86-87 29.52853877411435 35.0 30.0 35.0 2.0 36.0 88-89 29.413736810606686 35.0 30.0 35.0 2.0 35.0 90-91 29.308231746170016 34.5 30.0 35.0 2.0 35.0 92-93 29.222078653226028 34.0 30.0 35.0 2.0 35.0 94-95 29.158808683827196 34.0 30.0 35.0 2.0 35.0 96-97 29.064214863101316 34.0 30.0 35.0 2.0 35.0 98-99 29.004085263852392 34.0 30.0 35.0 2.0 35.0 100-101 28.942248564713324 34.0 30.0 35.0 2.0 35.0 102-103 27.95568234794995 33.5 28.0 34.5 2.0 35.0 104-105 28.790260618056465 34.0 29.5 35.0 2.0 35.0 106-107 29.122484921222565 35.0 30.0 35.0 2.0 35.0 108-109 29.162607212970897 35.0 31.0 35.0 2.0 35.0 110-111 29.108911198543016 35.0 30.0 35.0 2.0 35.0 112-113 29.036136638969143 35.0 30.0 35.0 2.0 35.0 114-115 28.91624321878463 35.0 30.0 35.0 2.0 35.0 116-117 28.85597045382321 35.0 30.0 35.0 2.0 35.0 118-119 28.698534144417508 35.0 30.0 35.0 2.0 35.0 120-121 28.532734134416067 35.0 30.0 35.0 2.0 35.0 122-123 28.406912443883073 35.0 30.0 35.0 2.0 35.0 124-125 27.536259237213084 34.0 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 41116.0 3 7383.0 4 4880.0 5 4440.0 6 4646.0 7 5412.0 8 6023.0 9 6371.0 10 6815.0 11 7221.0 12 7280.0 13 7765.0 14 8824.0 15 7695.0 16 5219.0 17 4609.0 18 4246.0 19 3967.0 20 3856.0 21 3931.0 22 4813.0 23 6374.0 24 9533.0 25 13069.0 26 15736.0 27 16358.0 28 19433.0 29 23134.0 30 25996.0 31 30892.0 32 39659.0 33 51322.0 34 72795.0 35 117962.0 36 229979.0 37 326601.0 38 84378.0 39 89.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.79881838236837 16.920596650738553 12.470245731926752 24.810339234966328 2 17.24194127447065 19.062360074062422 37.83855521805251 25.857143433414414 3 19.704429920702086 23.354279900895765 28.496582904599666 28.444707273802482 4 14.07501597526577 15.005373498486385 34.55796923712458 36.36164128912326 5 15.270558771274443 36.251147734626 32.731939215651465 15.746354278448086 6 34.347723291268146 33.54087537229668 16.79436311948918 15.317038216945985 7 30.240174672489083 30.75375116593564 20.097180130197493 18.90889403137779 8 28.055264648407558 32.84469000772943 19.180696100911877 19.919349242951125 9 27.669592339411388 14.718347187183085 18.714839284316817 38.89722118908871 10-11 26.93720595674846 24.450278804035175 26.260871178900132 22.351644060316232 12-13 27.182178287321502 22.182256953815507 26.359730177959744 24.275834580903243 14-15 24.61462123718161 23.368282194234446 23.803482245871084 28.21361432271286 16-17 24.77674717323354 26.232570223381924 24.355011529753863 24.63567107363067 18-19 24.969234506093787 25.22068441825578 25.883847248213183 23.92623382743725 20-21 26.132435253817626 24.22841467740198 25.492892557714804 24.146257511065595 22-23 25.860185745971787 23.74509296780777 25.394791898257335 24.99992938796311 24-25 25.366341052594198 24.22094139552001 25.41060907062585 25.00210848125994 26-27 24.959138509458363 24.24426920369014 25.55449980734276 25.24209247950873 28-29 24.89718600527334 24.317320320112326 25.64328092943125 25.142212745183084 30-31 25.263801329446533 24.288443498522277 25.401789406792485 25.045965765238705 32-33 24.967276377821857 24.30796196796878 25.30976479341751 25.414996860791856 34-35 25.25276894042391 24.366554701449846 25.461180774472254 24.91949558365399 36-37 25.379357650096836 24.112895416397677 25.313791155584248 25.19395577792124 38-39 25.382002128163546 24.26231532410914 25.217204632568972 25.13847791515834 40-41 25.42156104071533 24.225487245241727 25.37500110953042 24.977950604512518 42-43 25.297838214080357 24.29552813953254 25.282303214937805 25.124330431449295 44-45 25.188652712358127 24.315489556865362 25.167347192412652 25.328510538363858 46-47 25.238982048855686 24.428043089202884 25.12014172062233 25.21283314131911 48-49 25.550221242419312 24.54675261639788 24.70301629653061 25.200009844652193 50-51 25.38567342503824 24.783685978816656 24.685358672754862 25.14528192339024 52-53 25.510955944601683 24.58459735662768 24.86346934345036 25.040977355320276 54-55 25.387105702511413 24.557861499716363 24.895441718895377 25.159591078876847 56-57 25.25364838935088 24.541278481482497 24.807837238988668 25.397235890177956 58-59 25.427340082337203 24.40805006721569 24.815378755969125 25.349231094477986 60-61 25.29605330835412 24.578142945489883 25.010478602874464 25.11532514328153 62-63 25.169125822834243 24.73880711425837 24.84104109208804 25.25102597081934 64-65 25.263720165943898 24.43981023686503 24.99692375222347 25.299545844967604 66-67 25.176553643826775 24.58619924561793 25.004256005809143 25.232991104746148 68-69 25.35448247374107 24.58012735955233 24.75971836644795 25.305671800258654 70-71 25.06553424989157 24.49300477107899 24.981853760881187 25.459607218148257 72-73 25.3463309552768 24.701411706331196 24.809442840920322 25.142814497471676 74-75 25.148140019752002 24.811234435615575 24.77581315638293 25.264812388249496 76-77 25.227426110465895 24.56318978658998 24.76747089579122 25.441913207152904 78-79 25.240014086796776 24.53906282461252 24.923827623111222 25.29709546547948 80-81 25.154614057818314 24.764065321111577 24.736837434592566 25.34448318647754 82-83 25.285157376540035 24.63810555229515 24.720348331851028 25.356388739313786 84-85 25.089019502813777 24.75871560225102 24.710192511229284 25.44207238370592 86-87 24.89371931573793 24.8209563728883 24.790221693037186 25.495102618336585 88-89 25.02364717010433 24.63234448834381 24.788728417545496 25.555279924006364 90-91 24.928037054111055 24.673298107083124 24.817163500377713 25.581501338428115 92-93 25.04303786848402 24.743265198780904 24.753631395782207 25.460065536952868 94-95 24.94879698113938 24.628147906746374 24.834411977997423 25.58864313411682 96-97 24.99803377550193 24.633707500813713 24.815890804562933 25.552367919121423 98-99 24.953759011245456 24.624244071756014 24.757784336706994 25.66421258029154 100-101 24.86057178072866 24.772123390545822 24.80838198734216 25.558922841383357 102-103 25.010143149482193 24.528232639888753 25.003125622603857 25.458498588025197 104-105 24.807351126895586 24.782547849152515 24.838929934168473 25.57117108978343 106-107 24.854293516641253 24.742334151115298 24.83186937858922 25.571502953654228 108-109 24.833355717934662 24.649600323951564 24.883650488851462 25.633393469262312 110-111 24.842631085643855 24.778667195800487 24.8663856449867 25.512316073568957 112-113 24.82542724649745 24.72258318471358 24.920689079412554 25.531300489376413 114-115 24.595239017087398 24.954345413246607 25.00213753807238 25.448278031593617 116-117 24.590039636895707 25.050009921323102 24.861625774145516 25.498324667635675 118-119 24.771098404238113 24.700430797492835 24.822684140054463 25.705786658214585 120-121 24.4150464392776 24.745865070685007 25.135375371680173 25.703713118357218 122-123 24.436171817829017 24.811263896520092 25.073481417652804 25.679082867998087 124-125 24.52672520459506 24.9086521166091 25.01576910481494 25.548853573980896 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 58.0 1 66.5 2 73.5 3 72.0 4 71.5 5 84.0 6 97.0 7 127.0 8 172.0 9 217.5 10 253.5 11 272.5 12 305.0 13 360.5 14 437.5 15 505.0 16 561.5 17 618.0 18 710.5 19 793.0 20 830.0 21 945.5 22 1120.5 23 1346.0 24 1583.5 25 1884.5 26 2385.5 27 3021.0 28 3740.0 29 4461.0 30 5399.5 31 6461.5 32 7599.0 33 8771.5 34 10003.5 35 11308.0 36 13218.0 37 15442.5 38 17444.0 39 19843.0 40 22146.5 41 24385.0 42 26950.0 43 30721.0 44 34419.5 45 37136.5 46 40577.0 47 43965.5 48 48009.5 49 52319.0 50 53015.5 51 53065.0 52 53742.5 53 54526.0 54 55420.5 55 55331.0 56 53523.0 57 49369.0 58 46171.5 59 43113.5 60 39095.0 61 35068.5 62 30640.5 63 24290.5 64 18309.0 65 14626.0 66 11270.0 67 8624.5 68 7032.0 69 5778.5 70 4985.0 71 4168.5 72 3363.5 73 3186.0 74 2715.0 75 2130.0 76 1547.0 77 893.0 78 542.0 79 391.5 80 253.0 81 112.5 82 63.5 83 34.5 84 21.0 85 20.0 86 17.5 87 13.5 88 9.0 89 6.5 90 7.0 91 6.0 92 3.5 93 4.5 94 5.5 95 3.5 96 2.5 97 2.5 98 3.5 99 5.5 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0406509966753292 2 0.026374753795302873 3 0.025729499879821458 4 0.032746636210681856 5 0.03419845752051504 6 0.04476449038652323 7 0.03823129449227389 8 0.03258532273181151 9 0.02702000771078429 10-11 0.03395648730220951 12-13 0.0332709050170105 14-15 0.031617441858589376 16-17 0.03387583056277433 18-19 0.049119954316022785 20-21 0.05916171837570232 22-23 0.052951149439193684 24-25 0.06279127165028528 26-27 0.04633729680550918 28-29 0.04593401310833329 30-31 0.04714386419986095 32-33 0.0529108210694761 34-35 0.03621487600639447 36-37 0.05016849192868009 38-39 0.05851646446022091 40-41 0.04508711734426393 42-43 0.055209538143378645 44-45 0.05698398641095254 46-47 0.061662077298192806 48-49 0.04601466984776847 50-51 0.04786977485477754 52-53 0.058314822611632955 54-55 0.04524843082313429 56-57 0.04097362363306991 58-59 0.04258675842177345 60-61 0.03157711348887179 62-63 0.04097362363306991 64-65 0.03932016047464878 66-67 0.03202072555576527 68-69 0.027342634668524997 70-71 0.04714386419986095 72-73 0.029399381524122012 74-75 0.03661815970357035 76-77 0.028512157390335063 78-79 0.029318724784686834 80-81 0.022906513999590265 82-83 0.016091019517317808 84-85 0.01661528832364646 86-87 0.014518213098331859 88-89 0.019720572791900773 90-91 0.009799793841374005 92-93 0.01742185571799823 94-95 0.01201785417584137 96-97 0.011009644932901658 98-99 0.009759465471656415 100-101 0.009356181774480532 102-103 0.0055653150210272125 104-105 0.005363673172439269 106-107 0.006976807961142808 108-109 0.010525704496290597 110-111 0.004839404366110619 112-113 0.0065331958942493355 114-115 0.0062912256759438045 116-117 0.005484658281592035 118-119 0.2456804283195491 120-121 0.3672301346483608 122-123 0.031698098598024554 124-125 0.004516777408369911 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1239822.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.94971258653062 #Duplication Level Percentage of deduplicated Percentage of total 1 79.50533114376273 47.66321751165519 2 10.987099400094744 13.17346902390646 3 3.670953064207347 6.60217743353623 4 1.7699520735889298 4.24432472414361 5 1.0330816138558785 3.0966472914544565 6 0.6605496159942202 2.375985577679801 7 0.4593765668839407 1.9277645207575584 8 0.3273782217604795 1.5700984241304183 9 0.262674552243983 1.4172537519740163 >10 1.2470737918762334 12.978316261650471 >50 0.054985244178367136 2.2511477727711897 >100 0.02059620746084012 2.27564679699427 >500 8.130035076556175E-4 0.3324022075197254 >1k 1.3550058460926956E-4 0.09154870182666924 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 8.065673943517698E-5 12-13 0.0 0.0 0.0 0.0 8.065673943517698E-5 14-15 0.0 0.0 0.0 0.0 1.2098510915276547E-4 16-17 0.0 0.0 0.0 0.0 1.6131347887035397E-4 18-19 0.0 0.0 0.0 0.0 2.4197021830553095E-4 20-21 0.0 0.0 0.0 0.0 2.4197021830553095E-4 22-23 0.0 0.0 0.0 4.032836971758849E-5 2.8229858802311945E-4 24-25 0.0 0.0 0.0 1.6131347887035397E-4 3.2262695774070793E-4 26-27 0.0 0.0 0.0 5.242688063286504E-4 3.6295532745829646E-4 28-29 0.0 0.0 0.0 0.0016534631584211282 4.0328369717588494E-4 30-31 0.0 0.0 0.0 0.0045571057780874995 4.436120668934734E-4 32-33 0.0 0.0 0.0 0.010082092429397123 4.839404366110619E-4 34-35 0.0 0.0 0.0 0.018430064960937943 4.839404366110619E-4 36-37 0.0 0.0 0.0 0.029842993591015485 4.839404366110619E-4 38-39 0.0 0.0 0.0 0.04831338692167102 4.839404366110619E-4 40-41 0.0 0.0 0.0 0.06871954199877078 4.839404366110619E-4 42-43 0.0 0.0 0.0 0.08908536870615298 4.839404366110619E-4 44-45 0.0 0.0 0.0 0.11090301672336836 4.839404366110619E-4 46-47 0.0 0.0 0.0 0.1394151741137034 4.839404366110619E-4 48-49 0.0 0.0 0.0 0.1692178393350013 4.839404366110619E-4 50-51 0.0 0.0 0.0 0.1997060868414982 4.839404366110619E-4 52-53 0.0 0.0 0.0 0.23148484217895793 5.242688063286504E-4 54-55 0.0 0.0 0.0 0.2657236280691906 5.645971760462389E-4 56-57 0.0 0.0 0.0 0.3071811921388715 5.645971760462389E-4 58-59 0.0 0.0 0.0 0.35234896622257067 6.049255457638274E-4 60-61 0.0 0.0 0.0 0.4000170992287603 6.452539154814159E-4 62-63 0.0 0.0 0.0 0.45079051670320414 6.452539154814159E-4 64-65 0.0 0.0 0.0 0.5022495164628471 6.452539154814159E-4 66-67 0.0 0.0 0.0 0.563508310063864 6.452539154814159E-4 68-69 0.0 0.0 0.0 0.6362606890343936 6.855822851990043E-4 70-71 0.0 0.0 0.0 0.7163125029238068 7.259106549165928E-4 72-73 0.0 0.0 0.0 0.8021312736828352 9.678808732221238E-4 74-75 0.0 0.0 0.0 0.8895631792305669 9.678808732221238E-4 76-77 0.0 0.0 0.0 0.9830443402359371 9.678808732221238E-4 78-79 0.0 0.0 0.0 1.0945926108747868 9.678808732221238E-4 80-81 0.0 0.0 0.0 1.2123514504501451 9.678808732221238E-4 82-83 0.0 0.0 0.0 1.3444671896449654 9.678808732221238E-4 84-85 0.0 0.0 0.0 1.4790026310228404 9.678808732221238E-4 86-87 0.0 0.0 0.0 1.6253139563582515 0.0010485376126573008 88-89 0.0 0.0 0.0 1.7848529869610315 0.0011291943520924778 90-91 0.0 0.0 0.0 1.9678631287394481 0.0011291943520924778 92-93 0.0 0.0 0.0 2.1595035416374286 0.0011291943520924778 94-95 0.0 0.0 0.0 2.368485153513972 0.0011291943520924778 96-97 0.0 0.0 0.0 2.579039571809502 0.0011291943520924778 98-99 0.0 0.0 0.0 2.814315280741913 0.0011291943520924778 100-101 0.0 4.032836971758849E-5 0.0 3.081531058490654 0.0011291943520924778 102-103 0.0 8.065673943517698E-5 0.0 3.37225827578475 0.0014114929401155972 104-105 0.0 8.065673943517698E-5 0.0 3.669559017342812 0.0014518213098331856 106-107 0.0 8.065673943517698E-5 0.0 3.9798051655802205 0.0014518213098331856 108-109 0.0 8.065673943517698E-5 0.0 4.3031983623455625 0.001492149679550774 110-111 0.0 8.065673943517698E-5 0.0 4.656232910853332 0.0016131347887035398 112-113 0.0 8.065673943517698E-5 0.0 5.0334241528219374 0.0016937915281387166 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1525 0.0 74.544136 1 GTATCAA 2900 0.0 57.055405 1 TCAACGC 3845 0.0 42.399815 4 CAACGCA 3920 0.0 41.73701 5 AACGCAG 4160 0.0 39.325928 6 ATCAACG 4180 0.0 38.713932 3 TATCAAC 4430 0.0 36.79777 2 ACGCAGA 4865 0.0 33.260265 7 GTACATG 6660 0.0 32.886948 1 CGCAGAG 5150 0.0 31.415844 8 ACATGGG 6820 0.0 30.706688 3 TACATGG 7010 0.0 30.553373 2 GTATAGG 340 0.0 29.759111 1 CATGGGG 5760 0.0 28.819834 4 GCAGAGT 5640 0.0 27.842735 9 CAGAGTA 5300 0.0 25.476856 10-11 AGAGTAC 5155 0.0 24.924185 10-11 ATGGGGG 3205 0.0 24.688705 5 GTATTAC 220 1.534354E-7 24.348364 1 GTGGTAT 685 0.0 23.459738 1 >>END_MODULE