##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921539_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1239822 Sequences flagged as poor quality 0 Sequence length 125 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.399603330155458 33.0 31.0 34.0 28.0 34.0 2 31.46146946900442 33.0 31.0 34.0 28.0 34.0 3 31.53657702476646 33.0 31.0 34.0 28.0 34.0 4 35.043539314514504 37.0 35.0 37.0 32.0 37.0 5 34.71542931162699 37.0 35.0 37.0 32.0 37.0 6 34.70176041399491 37.0 35.0 37.0 31.0 37.0 7 34.55870197496092 37.0 35.0 37.0 31.0 37.0 8 34.52576982824954 37.0 35.0 37.0 31.0 37.0 9 36.11318237617981 39.0 37.0 39.0 31.0 39.0 10-11 35.99499807230393 39.0 37.0 39.0 30.0 39.0 12-13 35.908059786001544 39.0 37.0 39.0 30.0 39.0 14-15 37.109139053831925 40.0 37.0 41.0 31.0 41.0 16-17 37.09424941644849 40.0 37.0 41.0 31.0 41.0 18-19 37.122590984834915 40.0 37.0 41.0 30.5 41.0 20-21 37.104200844960005 40.0 37.0 41.0 30.0 41.0 22-23 37.05095247543599 40.0 37.0 41.0 30.0 41.0 24-25 36.981468307547374 40.0 37.0 41.0 30.0 41.0 26-27 36.86204793913966 40.0 37.0 41.0 30.0 41.0 28-29 36.67393182247129 40.0 36.0 41.0 30.0 41.0 30-31 36.61604488386236 40.0 36.0 41.0 30.0 41.0 32-33 36.48224099911117 40.0 36.0 41.0 30.0 41.0 34-35 36.34168775840403 40.0 35.0 41.0 30.0 41.0 36-37 36.19866198534951 40.0 35.0 41.0 29.0 41.0 38-39 36.02514554508631 40.0 35.0 41.0 28.5 41.0 40-41 35.80293219510543 40.0 35.0 41.0 27.5 41.0 42-43 35.61488544323298 39.0 35.0 41.0 27.0 41.0 44-45 35.37908344907575 39.0 35.0 41.0 26.0 41.0 46-47 35.07255235025673 39.0 35.0 41.0 24.5 41.0 48-49 34.76709116308632 39.0 34.0 41.0 24.0 41.0 50-51 34.514772685111254 39.0 34.0 41.0 23.0 41.0 52-53 34.30411784917513 38.0 34.0 41.0 22.5 41.0 54-55 34.07471112788771 38.0 34.0 40.0 22.0 41.0 56-57 33.798148443889524 37.5 33.0 40.0 21.5 41.0 58-59 33.637292692015464 37.0 33.0 40.0 21.5 41.0 60-61 33.503065762665926 37.0 33.0 40.0 22.0 41.0 62-63 33.232477726641406 36.0 33.0 39.5 21.0 41.0 64-65 32.92428066286935 35.5 33.0 39.0 20.0 41.0 66-67 32.618079853398314 35.0 33.0 39.0 20.0 41.0 68-69 32.29640464518293 35.0 33.0 38.5 19.0 40.5 70-71 31.99823966666183 35.0 32.0 37.0 18.0 40.0 72-73 31.696005152352512 35.0 32.0 37.0 18.0 39.0 74-75 31.41863711081107 35.0 32.0 36.0 17.0 39.0 76-77 31.147265897846626 35.0 32.0 36.0 15.0 38.0 78-79 30.885133914384483 35.0 32.0 35.0 13.0 37.0 80-81 30.68174302440189 35.0 31.5 35.0 11.5 37.0 82-83 30.51369874062567 35.0 31.0 35.0 10.5 36.0 84-85 30.33974110799776 35.0 31.0 35.0 9.0 36.0 86-87 30.20991319721702 35.0 31.0 35.0 7.0 36.0 88-89 30.11757736191163 35.0 31.0 35.0 7.0 35.5 90-91 30.03315516259592 35.0 31.0 35.0 7.0 35.0 92-93 30.105615160885996 35.0 31.0 35.0 7.0 35.0 94-95 30.077428453439282 35.0 31.0 35.0 5.5 35.0 96-97 30.067508077772455 35.0 31.5 35.0 2.0 35.0 98-99 30.031298444454123 35.0 31.5 35.0 2.0 35.0 100-101 29.98145701560385 35.0 31.0 35.0 2.0 35.0 102-103 29.099814328185822 33.5 29.5 35.0 2.0 35.0 104-105 29.808027281335548 34.5 31.0 35.0 2.0 35.0 106-107 29.917944672703015 35.0 31.0 35.0 2.0 35.0 108-109 29.92614907623836 35.0 32.0 35.0 2.0 35.0 110-111 29.893327025976312 35.0 32.0 35.0 2.0 35.0 112-113 29.8489464616695 35.0 32.0 35.0 2.0 35.0 114-115 29.79110670725314 35.0 32.0 35.0 2.0 35.0 116-117 29.71693194668267 35.0 31.0 35.0 2.0 35.0 118-119 29.62538251458677 35.0 31.0 35.0 2.0 35.0 120-121 29.509100499910474 35.0 31.0 35.0 2.0 35.0 122-123 29.39264023384002 35.0 31.0 35.0 2.0 35.0 124-125 28.47280859671792 34.0 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 17576.0 3 6516.0 4 3842.0 5 3298.0 6 3723.0 7 4309.0 8 5027.0 9 5492.0 10 6399.0 11 7190.0 12 7550.0 13 8888.0 14 11804.0 15 10161.0 16 5289.0 17 4456.0 18 4025.0 19 3476.0 20 3377.0 21 3609.0 22 4185.0 23 5703.0 24 7938.0 25 11130.0 26 14063.0 27 15504.0 28 18695.0 29 22122.0 30 25364.0 31 30634.0 32 38132.0 33 49161.0 34 69147.0 35 112584.0 36 230447.0 37 356590.0 38 102193.0 39 223.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.944488949473154 17.319544670486923 12.828027185394312 24.907939194645614 2 17.386082616417784 19.418019974157165 36.961627743784895 26.23426966564016 3 19.58570926071144 23.560809219082287 28.76066141945727 28.092820100748998 4 14.072082702136882 15.50786127102318 34.161441557194266 36.25861446964567 5 15.176337609089053 36.18065478039386 32.679397387106896 15.963610223410186 6 34.38584545981119 33.9120536571435 16.224525522477883 15.477575360567423 7 29.79292897921384 31.159070136646385 19.96857108975874 19.079429794381035 8 28.215345252863866 32.91456881100989 18.812623108703473 20.05746282742277 9 27.797122841828898 14.2380209152541 18.58271527265248 39.38214097026453 10-11 27.00273889509318 24.40810867819576 25.977518555399204 22.61163387131186 12-13 27.40224574456329 22.155655054538475 26.38616772345126 24.055931477446972 14-15 24.737191063891224 23.159490522101116 24.207136917144105 27.896181496863555 16-17 24.647020744980125 26.030705071196802 24.68896646157631 24.63330772224676 18-19 24.730540974912333 24.61596165363651 26.86778207747111 23.785715293980047 20-21 25.77628866519933 23.62494045768028 26.75062486664739 23.848146010472995 22-23 25.544914647549334 23.116125714631416 26.669812557346965 24.669147080472285 24-25 24.978865104512867 23.7150467549062 26.62016720767697 24.68592093290397 26-27 24.60728465389263 23.736228545247165 26.81063674979955 24.84585005106066 28-29 24.772203020944296 23.76877099138423 26.789069939752935 24.669956047918536 30-31 25.005395066065862 23.731554420384356 26.601608556594947 24.661441956954835 32-33 24.65011222948459 23.848150381459245 26.514392196168668 24.987345192887496 34-35 24.92066699823767 23.874927544474684 26.653992748195215 24.550412709092427 36-37 25.10477920638448 23.72545690026181 26.419364479980125 24.75039941337358 38-39 25.154852585501704 23.83870645048348 26.230430650727754 24.77601031328707 40-41 25.208448028652153 23.808469404834646 26.294842088493365 24.68824047801984 42-43 25.089395979217706 23.944248206635592 26.14468395405696 24.821671860089747 44-45 25.003125975606906 23.939568236215656 25.924582914183702 25.13272287399374 46-47 25.216909393565263 24.134046395276656 25.623038477998083 25.02600573316 48-49 25.514224183309985 24.332354627019313 25.05736907769401 25.096052111976697 50-51 25.344433841033265 24.626444871628365 24.943189289174384 25.085931998163986 52-53 25.577000492918035 24.496977549237346 24.94128950907461 24.984732448770004 54-55 25.329678972906912 24.503979058013982 25.032973947556297 25.133368021522813 56-57 25.24227161123277 24.501127205856548 24.91026118341892 25.346339999491757 58-59 25.351608207478794 24.331582401297812 25.041232210857228 25.275577180366167 60-61 25.159438762647905 24.371350837882915 25.36946915594565 25.09974124352353 62-63 25.145837686345914 24.551434658827347 25.17766341847893 25.12506423634781 64-65 25.239660427784838 24.22237164095244 25.326420991619596 25.211546939643124 66-67 25.15287020078721 24.42265056217434 25.22143542507011 25.20304381196834 68-69 25.353307466137544 24.402508518305027 24.993576227888408 25.250607787669022 70-71 25.122665523334582 24.239715758824154 25.292390643660738 25.345228074180525 72-73 25.43989570930259 24.557038815371264 24.880285121473495 25.122780353852658 74-75 25.176859418795118 24.72139524021379 24.847079475111013 25.254665865880078 76-77 25.30361751634398 24.439601783207152 24.830671550198783 25.426109150250088 78-79 25.315690258671776 24.4782331753218 24.897244096552832 25.30883246945359 80-81 25.16166870500463 24.6481850187 24.797954455247456 25.39219182104791 82-83 25.299150814600907 24.57100105467576 24.760842691984266 25.369005438739066 84-85 25.095933175494995 24.6590006171022 24.652668261183464 25.592397946219343 86-87 24.958316158326806 24.677277930190556 24.77363274176023 25.590773169722407 88-89 25.020026928454048 24.518970523104176 24.742231447561718 25.718771100880055 90-91 24.88422350087483 24.569664742234444 24.79972541145931 25.746386345431414 92-93 24.989009730320962 24.663859072881014 24.740932120061334 25.606199076736686 94-95 24.949908609427506 24.451132259016852 24.826495038451796 25.772464093103842 96-97 24.954831278694236 24.50274077348209 24.787505363785655 25.75492258403802 98-99 24.904137918796714 24.407082743857487 24.732578266529657 25.95620107081615 100-101 24.87844738541385 24.553285318622123 24.78080196694414 25.787465329019888 102-103 25.01203841646226 24.31514114186296 24.940695171163295 25.732125270511485 104-105 24.838137779896417 24.52881095089568 24.737394830894612 25.895656438313292 106-107 24.864224187472452 24.507236738896268 24.731341941306777 25.8971971323245 108-109 24.920467494226912 24.33797533453669 24.762673066645156 25.978884104591245 110-111 24.951646050704298 24.48121334133452 24.716369203172086 25.850771404789096 112-113 24.870363506495234 24.47313559188734 24.76896935710705 25.887531544510377 114-115 24.537301418302427 24.59315756191361 24.872720585388517 25.996820434395445 116-117 24.623605434439792 24.63147009452918 24.7506096119859 25.994314859045126 118-119 24.622755428070853 24.352329934428372 24.833449354810348 26.19146528269043 120-121 24.339134117077695 24.382892057026474 24.97828234961989 26.29969147627594 122-123 24.408440923136236 24.352142291967283 24.9654586120371 26.27395817285938 124-125 24.45973806679954 24.51443690251304 24.769496443970603 26.256328586716815 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 28.0 1 22.0 2 28.0 3 41.0 4 35.5 5 39.5 6 76.0 7 157.0 8 270.0 9 333.5 10 319.0 11 332.5 12 387.0 13 454.0 14 574.0 15 692.0 16 822.5 17 968.0 18 1075.5 19 1209.5 20 1404.0 21 1589.5 22 1759.5 23 1935.0 24 2148.0 25 2493.0 26 2974.0 27 3483.0 28 4024.5 29 4766.0 30 5746.0 31 6713.0 32 7664.0 33 8674.0 34 9771.5 35 11092.5 36 12943.0 37 15127.5 38 17020.0 39 19088.0 40 21506.5 41 23886.0 42 26375.5 43 29883.0 44 33503.0 45 36401.5 46 40180.0 47 43977.5 48 48041.5 49 52219.0 50 52955.5 51 53110.0 52 53763.5 53 54414.0 54 55663.5 55 55674.0 56 53487.5 57 49336.0 58 46561.5 59 43543.0 60 39096.5 61 34899.5 62 30398.0 63 24111.5 64 18058.0 65 14342.5 66 11075.5 67 8505.0 68 6939.0 69 5686.0 70 4932.0 71 4104.5 72 3370.0 73 3245.0 74 2716.0 75 2089.0 76 1463.5 77 832.0 78 515.0 79 341.5 80 194.5 81 71.5 82 47.0 83 20.5 84 6.0 85 4.5 86 4.0 87 2.0 88 1.0 89 0.5 90 0.0 91 1.0 92 1.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12179167654711724 2 0.0016131347887035398 3 0.02468096226716416 4 0.06234765958339181 5 0.028471829020617474 6 0.020002871379923893 7 0.01605069114760022 8 0.005162031323851327 9 0.0045974341478050886 10-11 0.007138121440013163 12-13 0.004436120668934734 14-15 0.0034682397957126105 16-17 0.010041764059679536 18-19 0.005605643390744801 20-21 0.012703436461040376 22-23 0.00883191296815188 24-25 0.013389018746239378 26-27 0.009678808732221237 28-29 0.014235914510308737 30-31 0.021253050841169137 32-33 0.014074601031438384 34-35 0.02165633453834502 36-37 0.015445765601836392 38-39 0.020648125295405308 40-41 0.010041764059679536 42-43 0.009114211556174999 44-45 0.01685725854195199 46-47 0.015445765601836392 48-49 0.021011080622863606 50-51 0.01443755635889668 52-53 0.0213740359503219 54-55 0.016695945063081634 56-57 0.020365826707382188 58-59 0.015849049299012277 60-61 0.01931728909472489 62-63 0.02089009551371084 64-65 0.016413646475058517 66-67 0.010203077538549888 68-69 0.02302749910874303 70-71 0.013751974073697677 72-73 0.016937915281387165 74-75 0.016736273432799223 76-77 0.011735555587818252 78-79 0.02867347086920542 80-81 0.020164184858794246 82-83 0.008428629270975995 84-85 0.012663108091322787 86-87 0.010727346344878538 88-89 0.019438274203877653 90-91 0.01201785417584137 92-93 0.007178449809730751 94-95 0.007097793070295576 96-97 0.0020970752253146015 98-99 0.0016131347887035398 100-101 0.01068701797516095 102-103 0.0033069263168422564 104-105 0.0026616724013608407 106-107 2.0164184858794247E-4 108-109 0.018914005397549002 110-111 4.839404366110619E-4 112-113 0.008509286010411172 114-115 0.0024197021830553093 116-117 0.007985017204082522 118-119 0.008791584598434292 120-121 0.003790866753453318 122-123 4.0328369717588494E-4 124-125 0.024801947376316927 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1239822.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.76086502651417 #Duplication Level Percentage of deduplicated Percentage of total 1 79.1398563109309 46.50326414904336 2 11.159965880720996 13.115384976350997 3 3.691022561099919 6.506630355678329 4 1.7946105724083377 4.218114784817666 5 1.0491076570954543 3.082323671843425 6 0.6892437357069907 2.4300334874549328 7 0.48759622225072713 2.0056103062179225 8 0.33371752151881395 1.568762419115989 9 0.25268669305609415 1.3363279798198828 >10 1.316785154851703 13.45398094753952 >50 0.059955505328446956 2.4027687904269888 >100 0.024351554424863593 2.6816334040366425 >500 5.503153033703265E-4 0.1824615409135593 >1k 5.503153033703265E-4 0.5127031867407147 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2201 0.17752548349682454 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2124 0.17131491456031592 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 8.065673943517698E-5 7 0.0 0.0 0.0 0.0 8.065673943517698E-5 8 0.0 0.0 0.0 0.0 1.6131347887035397E-4 9 0.0 0.0 0.0 0.0 2.4197021830553095E-4 10-11 0.0 0.0 0.0 0.0 2.4197021830553095E-4 12-13 0.0 0.0 0.0 0.0 2.8229858802311945E-4 14-15 0.0 0.0 0.0 0.0 3.6295532745829646E-4 16-17 0.0 0.0 0.0 0.0 4.436120668934734E-4 18-19 0.0 0.0 0.0 0.0 4.839404366110619E-4 20-21 0.0 0.0 0.0 0.0 4.839404366110619E-4 22-23 0.0 0.0 0.0 4.032836971758849E-5 5.645971760462389E-4 24-25 0.0 0.0 0.0 1.6131347887035397E-4 6.452539154814159E-4 26-27 0.0 0.0 0.0 5.242688063286504E-4 6.452539154814159E-4 28-29 0.0 0.0 0.0 0.0016937915281387168 6.452539154814159E-4 30-31 0.0 0.0 0.0 0.004718419256957854 6.452539154814159E-4 32-33 0.0 0.0 0.0 0.010243405908267477 6.452539154814159E-4 34-35 0.0 0.0 0.0 0.018914005397549005 6.452539154814159E-4 36-37 0.0 0.0 0.0 0.030568904245932074 6.452539154814159E-4 38-39 0.0 0.0 0.0 0.05004750681952732 6.452539154814159E-4 40-41 0.0 0.0 0.0 0.07158285624871957 6.452539154814159E-4 42-43 0.0 0.0 0.0 0.09251328013214799 6.855822851990043E-4 44-45 0.0 0.0 0.0 0.11574242108947898 7.259106549165928E-4 46-47 0.0 0.0 0.0 0.14530311609247132 8.065673943517698E-4 48-49 0.0 0.0 0.0 0.17611399055670895 8.872241337869468E-4 50-51 0.0 0.0 0.0 0.2071668352392521 8.872241337869468E-4 52-53 0.0 0.0 0.0 0.23890526220699423 9.275525035045353E-4 54-55 0.0 0.0 0.0 0.27350700342468515 9.678808732221238E-4 56-57 0.0 0.0 0.0 0.3157711348887179 9.678808732221238E-4 58-59 0.0 0.0 0.0 0.3627940139794261 9.678808732221238E-4 60-61 0.0 0.0 0.0 0.41143002785883775 9.678808732221238E-4 62-63 0.0 0.0 0.0 0.46361493827339734 9.678808732221238E-4 64-65 0.0 0.0 0.0 0.5160014905365449 9.678808732221238E-4 66-67 0.0 0.0 0.0 0.5780668515319134 9.678808732221238E-4 68-69 0.0 0.0 0.0 0.6515451411573596 9.678808732221238E-4 70-71 0.0 0.0 0.0 0.732766477768583 0.0010888659823748894 72-73 0.0 0.0 0.0 0.8206823237529258 0.0012501794612452433 74-75 0.0 0.0 0.0 0.9093644087619029 0.0012905078309628317 76-77 0.0 0.0 0.0 1.0060315109749625 0.0012905078309628317 78-79 0.0 0.0 0.0 1.1204834242334787 0.0012905078309628317 80-81 0.0 0.0 0.0 1.2405409808827397 0.0012905078309628317 82-83 0.0 0.0 0.0 1.376124959873272 0.0015324780492683627 84-85 0.0 0.0 0.0 1.512838133215897 0.0015324780492683627 86-87 0.0 0.0 0.0 1.661730474213234 0.0016131347887035396 88-89 0.0 0.0 0.0 1.824979714830032 0.0016937915281387166 90-91 0.0 0.0 0.0 2.010570872270374 0.0017744482675738937 92-93 0.0 0.0 0.0 2.206768390946442 0.0017744482675738937 94-95 0.0 0.0 0.0 2.4192182426186983 0.0017744482675738937 96-97 0.0 0.0 0.0 2.634692722019774 0.0017744482675738937 98-99 0.0 0.0 0.0 2.874081924663379 0.0017744482675738937 100-101 0.0 0.0 0.0 3.1475889280880645 0.0017744482675738937 102-103 0.0 0.0 0.0 3.444526714318668 0.0019357617464442476 104-105 0.0 0.0 0.0 3.74852196524985 0.001976090116161836 106-107 0.0 0.0 0.0 4.064494741987156 0.0020164184858794247 108-109 0.0 0.0 0.0 4.393090298446067 0.0020567468555970133 110-111 0.0 0.0 0.0 4.756408581231822 0.002177731964749779 112-113 0.0 0.0 0.0 5.143359288672084 0.002177731964749779 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1850 0.0 81.86065 1 GTATCAA 3965 0.0 61.50257 1 TCAACGC 5345 0.0 45.11167 4 CAACGCA 5485 0.0 43.830456 5 ATCAACG 5590 0.0 43.134502 3 TATCAAC 5830 0.0 41.767296 2 AACGCAG 5750 0.0 41.69518 6 ACGCAGA 6750 0.0 35.518116 7 CGCAGAG 7080 0.0 33.61053 8 GTACATG 6170 0.0 33.145313 1 TATACCG 150 1.4768375E-7 31.737305 5 TACATGG 6655 0.0 30.953491 2 GCAGAGT 7560 0.0 30.76831 9 ACATGGG 6600 0.0 30.760405 3 CATGGGG 5530 0.0 27.991735 4 AGAGTAC 6990 0.0 27.873503 10-11 CAGAGTA 7260 0.0 26.386189 10-11 AGTACTT 4420 0.0 25.436768 12-13 GAGTACT 4170 0.0 25.249897 12-13 GTGGTAT 850 0.0 24.55061 1 >>END_MODULE