##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921538_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1650983 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.134624644832805 31.0 31.0 34.0 28.0 34.0 2 31.200965121990958 33.0 31.0 34.0 27.0 34.0 3 31.273687251776668 33.0 31.0 34.0 27.0 34.0 4 34.76977715700283 37.0 35.0 37.0 32.0 37.0 5 34.41767540913504 37.0 35.0 37.0 30.0 37.0 6 34.393816290052655 37.0 35.0 37.0 30.0 37.0 7 34.23152994307028 37.0 35.0 37.0 30.0 37.0 8 34.20213896811778 37.0 35.0 37.0 30.0 37.0 9 35.74319784031695 39.0 37.0 39.0 30.0 39.0 10-11 35.61517380857344 39.0 35.0 39.0 30.0 39.0 12-13 35.519819707410676 39.0 35.0 39.0 30.0 39.0 14-15 36.68275869587997 40.0 37.0 41.0 29.5 41.0 16-17 36.65721240012768 40.0 37.0 41.0 29.5 41.0 18-19 36.68893047354213 40.0 37.0 41.0 29.0 41.0 20-21 36.67415806219689 40.0 37.0 41.0 29.0 41.0 22-23 36.61532856486106 40.0 37.0 41.0 29.0 41.0 24-25 36.54935150755641 40.0 36.0 41.0 29.0 41.0 26-27 36.424104003493674 40.0 36.0 41.0 29.0 41.0 28-29 36.237020914206866 40.0 36.0 41.0 28.0 41.0 30-31 36.18512001637812 40.0 36.0 41.0 28.5 41.0 32-33 36.05348480269028 40.0 35.0 41.0 28.0 41.0 34-35 35.92271997955157 40.0 35.0 41.0 27.5 41.0 36-37 35.7825383423088 40.0 35.0 41.0 27.0 41.0 38-39 35.61061924925938 40.0 35.0 41.0 26.5 41.0 40-41 35.39663006826842 39.0 35.0 41.0 25.5 41.0 42-43 35.220730922123366 39.0 35.0 41.0 25.0 41.0 44-45 34.992186775999514 39.0 35.0 41.0 24.0 41.0 46-47 34.694418416179936 39.0 34.0 41.0 23.0 41.0 48-49 34.41385798642385 39.0 34.0 41.0 22.0 41.0 50-51 34.181384968833726 38.5 34.0 41.0 20.5 41.0 52-53 33.97605214590338 38.0 33.0 40.5 20.0 41.0 54-55 33.749098567338365 38.0 33.0 40.0 19.0 41.0 56-57 33.483094011264804 37.5 33.0 40.0 18.0 41.0 58-59 33.32736648408857 37.0 33.0 40.0 18.0 41.0 60-61 33.21255003837108 37.0 33.0 40.0 18.0 41.0 62-63 32.943724738534556 36.0 33.0 40.0 17.0 41.0 64-65 32.64707843751268 36.0 33.0 39.0 14.5 41.0 66-67 32.34114494213448 35.0 32.0 39.0 13.0 41.0 68-69 32.029106296067255 35.0 32.0 38.5 11.5 40.5 70-71 31.736749257866375 35.0 32.0 37.0 9.0 40.0 72-73 31.42726333342015 35.0 32.0 37.0 7.5 39.0 74-75 31.141184978888337 35.0 32.0 36.5 7.0 39.0 76-77 30.85609330925879 35.0 31.0 36.0 7.0 39.0 78-79 30.585443944607547 35.0 31.0 35.5 3.5 37.0 80-81 30.368809369932944 35.0 31.0 35.0 2.0 37.0 82-83 30.189858405568074 35.0 31.0 35.0 2.0 36.5 84-85 30.002866474094525 35.0 31.0 35.0 2.0 36.0 86-87 29.865383532113896 35.0 31.0 35.0 2.0 36.0 88-89 29.763038141519324 35.0 31.0 35.0 2.0 35.5 90-91 29.663984123398 35.0 31.0 35.0 2.0 35.0 92-93 29.723675228636516 35.0 31.0 35.0 2.0 35.0 94-95 29.692336626119108 35.0 31.0 35.0 2.0 35.0 96-97 29.67342607404195 35.0 31.0 35.0 2.0 35.0 98-99 29.632675503018504 35.0 31.0 35.0 2.0 35.0 100-101 29.583937872164643 35.0 31.0 35.0 2.0 35.0 102-103 28.706844346671044 33.5 29.0 35.0 2.0 35.0 104-105 29.40768287741303 34.5 30.5 35.0 2.0 35.0 106-107 29.515567089424906 35.0 31.0 35.0 2.0 35.0 108-109 29.517188547671296 35.0 31.0 35.0 2.0 35.0 110-111 29.479883196859085 35.0 31.0 35.0 2.0 35.0 112-113 29.4352718955919 35.0 31.0 35.0 2.0 35.0 114-115 29.37150170534766 35.0 31.0 35.0 2.0 35.0 116-117 29.295961557447896 35.0 31.0 35.0 2.0 35.0 118-119 29.19815588652336 35.0 31.0 35.0 2.0 35.0 120-121 29.077562579384526 35.0 31.0 35.0 2.0 35.0 122-123 28.959448704196227 35.0 31.0 35.0 2.0 35.0 124-125 28.048527453038584 34.0 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 31362.0 3 11151.0 4 6229.0 5 5190.0 6 5663.0 7 6505.0 8 7493.0 9 7985.0 10 9118.0 11 10095.0 12 10528.0 13 12254.0 14 15530.0 15 13191.0 16 7217.0 17 6128.0 18 5388.0 19 4993.0 20 4852.0 21 4992.0 22 6050.0 23 7954.0 24 11271.0 25 15728.0 26 19507.0 27 21263.0 28 25129.0 29 29671.0 30 34315.0 31 40862.0 32 51533.0 33 65558.0 34 91092.0 35 146282.0 36 293766.0 37 462591.0 38 142254.0 39 293.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.96173345623908 17.5926644673006 12.625715602561616 24.8198864738987 2 17.151042881241462 19.66383093421686 37.06266978809234 26.12245639644933 3 19.50050102567893 23.988709655921976 28.808431286781765 27.702358031617326 4 13.630887085532814 15.555966327476803 34.9508790855813 35.862267501409086 5 14.528667579912549 36.86910149086078 33.12210735627434 15.480123572952332 6 33.79079253549686 34.85843967093955 16.427698606418485 14.9230691871451 7 29.68705227951631 31.452945164028122 20.038976860442364 18.8210256960132 8 28.246044851067854 33.11549071225996 18.817410772155075 19.821053664517112 9 27.75068144648374 14.389242231510085 18.699133805802894 39.160942516203285 10-11 26.69266140350983 24.748992486887033 26.292896918975533 22.2654491906276 12-13 27.047078388668456 22.407444929130886 26.772227557710345 23.773249124490313 14-15 24.45087319679705 23.37486480994042 24.476495328503894 27.697766664758632 16-17 24.232272118338027 26.396197229640357 24.908067105788025 24.46346354623359 18-19 24.18246097773648 25.10932775733251 27.17131331719451 23.536897947736502 20-21 25.310842237833914 24.10548614968769 27.052073684982105 23.531597927496296 22-23 25.093506362127748 23.71879852691702 26.938888379042336 24.248806731912893 24-25 24.50603408821403 24.270776887911012 27.012627317398525 24.210561706476433 26-27 24.20502796020301 24.2866839287061 27.16323954911125 24.345048561979638 28-29 24.3457872164876 24.25355604913786 27.177662671396252 24.222994062978287 30-31 24.53786725861016 24.263241181431326 26.960338251117165 24.238553308841347 32-33 24.23849584661634 24.35510862404495 26.921165219103294 24.48523031023542 34-35 24.470145263817937 24.361700999777355 26.980054434173876 24.18809930223083 36-37 24.65654256279404 24.19056238694286 26.797585771975037 24.35530927828806 38-39 24.625691297669132 24.439245018279614 26.65485082934516 24.280212854706097 40-41 24.64836767120931 24.395551008268107 26.731023303232792 24.22505801728979 42-43 24.663050325894694 24.417962976424125 26.546546000823824 24.37244069685736 44-45 24.57477488884157 24.490900593057003 26.359034691365917 24.575289826735514 46-47 24.78759749281895 24.61866900587842 26.053213230641454 24.54052027066118 48-49 24.986868626285645 24.874123590611326 25.52118073919789 24.617827043905134 50-51 24.75650048887699 25.179315475288995 25.392918977271762 24.671265058562252 52-53 25.015327703885724 25.0402276497238 25.403488173434486 24.540956472955994 54-55 24.861474805271122 25.05648386964865 25.473702703562296 24.608338621517937 56-57 24.72976202700971 25.14166573520329 25.40907902656473 24.71949321122227 58-59 24.78930697495916 24.90850002438384 25.5526877199657 24.7495052806913 60-61 24.77537595863925 25.032669007970814 25.70310308624436 24.488851947145573 62-63 24.664550696646476 25.106111514326113 25.62334077699195 24.605997012035463 64-65 24.814788787429205 24.808488365119167 25.663740403214913 24.71298244423672 66-67 24.72059648890064 25.00455084176186 25.598537915251057 24.676314754086444 68-69 24.776782671519516 24.989162883899727 25.450668023767438 24.783386420813322 70-71 24.68360469085597 24.77680511842088 25.757938771226417 24.781651419496733 72-73 24.987459713572587 25.101261298374006 25.333983570407348 24.577295417646063 74-75 24.635525682073588 25.35244886151945 25.323369672223013 24.68865578418395 76-77 24.779942069054922 25.010381591250326 25.336110642471326 24.87356569722343 78-79 24.795114682157763 25.088087130145382 25.26985061767777 24.846947570019083 80-81 24.67773658473934 25.256031108131776 25.194872622838744 24.871359684290145 82-83 24.89053937977565 25.136962071016743 25.19617499645631 24.776323552751293 84-85 24.65503976931977 25.239827474451314 25.100983177547448 25.00414957868146 86-87 24.5216429440498 25.194203590362257 25.303152054437277 24.981001411150665 88-89 24.541171089439416 25.09892360096144 25.263162677563432 25.096742632035706 90-91 24.570982721182762 25.09952122589433 25.284615713131714 25.0448803397912 92-93 24.640465408869797 25.231857901038225 25.227435935256366 24.900240754835618 94-95 24.575002460834867 25.004474933557457 25.355049254556327 25.06547335105134 96-97 24.590433525363835 24.987234645686463 25.25919877791797 25.16313305103174 98-99 24.520839680646606 25.020548638035667 25.182787479534646 25.27582420178308 100-101 24.46016624807819 25.115672170711406 25.29976629314763 25.12439528806278 102-103 24.553472323385527 24.91535849263462 25.350051955454294 25.181117228525558 104-105 24.434274437545316 25.11767588387899 25.197236956315006 25.250812722260683 106-107 24.470950586924133 25.06859562199421 25.137494094416653 25.32295969666501 108-109 24.435579142509223 25.020174115337777 25.162483415423203 25.381763326729796 110-111 24.468821293121124 25.158747152060794 25.127129462023795 25.245302092794287 112-113 24.456165856465706 25.044053730710402 25.215634606938952 25.28414580588494 114-115 24.193261160177524 25.26350187802442 25.25574870512927 25.287488256668787 116-117 24.184475782026123 25.32328996147416 25.114396307334445 25.377837949165272 118-119 24.282830889412665 24.94180203788274 25.215452096550163 25.559914976154435 120-121 24.061186712330258 25.12081186542727 25.28914286268091 25.528858559561552 122-123 24.083458537089133 25.150221793115644 25.169331707224003 25.596987962571223 124-125 24.062799045055137 25.213040492461225 25.132189463435733 25.591970999047902 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 26.0 1 26.0 2 53.5 3 86.0 4 77.5 5 72.0 6 126.0 7 258.5 8 441.5 9 521.5 10 482.5 11 465.5 12 503.5 13 607.0 14 746.5 15 907.0 16 1048.0 17 1228.0 18 1445.5 19 1634.0 20 1855.5 21 2073.5 22 2330.0 23 2674.5 24 3058.5 25 3613.0 26 4539.0 27 5597.0 28 6321.0 29 7455.0 30 9435.5 31 11048.5 32 13113.5 33 15674.5 34 18046.5 35 20526.5 36 23536.0 37 26354.5 38 28312.0 39 31201.0 40 33738.5 41 35586.0 42 38081.5 43 42200.0 44 46678.0 45 50131.5 46 54237.5 47 57984.0 48 62302.5 49 66456.5 50 67177.0 51 67899.5 52 68647.5 53 69150.0 54 70293.5 55 69808.0 56 66812.5 57 61612.0 58 57992.5 59 54445.0 60 48895.0 61 43432.5 62 37202.0 63 29083.0 64 21787.5 65 17074.5 66 13288.5 67 10304.0 68 8250.5 69 6706.0 70 5649.5 71 4622.5 72 3787.0 73 3414.0 74 2821.0 75 2198.0 76 1606.0 77 944.0 78 517.0 79 302.5 80 183.0 81 87.0 82 43.5 83 17.5 84 9.0 85 6.5 86 3.5 87 1.5 88 1.5 89 1.5 90 0.5 91 0.0 92 0.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12253306060692327 2 0.0016959593163587995 3 0.022350320990585607 4 0.058934586243468284 5 0.027862188768751708 6 0.020836071600979538 7 0.01574819365190314 8 0.005875287631671556 9 0.005027307973492156 10-11 0.008237516679457027 12-13 0.005299872863621249 14-15 0.004027903376352149 16-17 0.01129630044646129 18-19 0.00596614259504792 20-21 0.013688814482038883 22-23 0.009660911105686733 24-25 0.014324799225673432 26-27 0.009358061227765519 28-29 0.014506509152426161 30-31 0.022713740844091064 32-33 0.013355679616325547 34-35 0.02213832607604076 36-37 0.016293323432161326 38-39 0.0226228858807147 40-41 0.011023735556332197 42-43 0.008661506508546727 44-45 0.018080137711896486 46-47 0.017232158053717087 48-49 0.021562911307990453 50-51 0.01580876362748738 52-53 0.02283488079525955 54-55 0.017595577907222545 56-57 0.021472056344614087 58-59 0.01814070768748073 60-61 0.020351511796305594 62-63 0.021865761185911665 64-65 0.018170992675272852 66-67 0.011478010373214019 68-69 0.024561125099410476 70-71 0.014506509152426161 72-73 0.01835270260202558 74-75 0.019261252235789224 76-77 0.013597959518662519 78-79 0.029467293121734142 80-81 0.021411486369029845 82-83 0.009751766069063098 84-85 0.012901404799443725 86-87 0.012265420055809176 88-89 0.02062407668643469 90-91 0.012386560006977661 92-93 0.00808609174049642 94-95 0.007298682057901263 96-97 0.0018170992675272855 98-99 0.0013325394628533427 100-101 0.01193228519009584 102-103 0.0029982137914200207 104-105 0.003028498779212142 106-107 1.8170992675272855E-4 108-109 0.021381201381237724 110-111 5.148447924660642E-4 112-113 0.009570056142310369 114-115 0.0027862188768751706 116-117 0.008661506508546727 118-119 0.009206636288804911 120-121 0.004179328315312756 122-123 4.5427481688182136E-4 124-125 0.025227394830837146 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1650983.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.542847981101616 #Duplication Level Percentage of deduplicated Percentage of total 1 80.63154723561937 46.39768865060259 2 10.029471256538992 11.542486796917029 3 3.3122745460106304 5.7179313201828625 4 1.6832895514367978 3.874450990660176 5 0.9588084921779884 2.758628565419362 6 0.6680552947763565 2.3065082562171546 7 0.4569292854300508 1.8405108686730363 8 0.35278734480302976 1.6240310841325778 9 0.2689674483675431 1.3929437693950502 >10 1.523634640744127 15.925362232802561 >50 0.085016245029859 3.3262322180577204 >100 0.028477688642034808 2.7026952012994347 >500 4.2341167040988814E-4 0.1576371075933186 >1k 3.175587528074161E-4 0.4328929380470306 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3001 0.18177049672831277 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2679 0.16226696459018658 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.056997558424284E-5 2 0.0 0.0 0.0 0.0 6.056997558424284E-5 3 0.0 0.0 0.0 0.0 6.056997558424284E-5 4 0.0 0.0 0.0 0.0 6.056997558424284E-5 5 0.0 0.0 0.0 0.0 6.056997558424284E-5 6 0.0 0.0 0.0 0.0 6.056997558424284E-5 7 0.0 0.0 0.0 0.0 6.056997558424284E-5 8 0.0 0.0 0.0 0.0 1.2113995116848568E-4 9 0.0 0.0 0.0 0.0 2.4227990233697137E-4 10-11 0.0 0.0 0.0 0.0 2.4227990233697137E-4 12-13 0.0 0.0 0.0 0.0 3.028498779212142E-4 14-15 0.0 0.0 0.0 6.056997558424284E-5 4.5427481688182125E-4 16-17 0.0 0.0 0.0 6.056997558424284E-5 5.451297802581855E-4 18-19 0.0 0.0 0.0 6.056997558424284E-5 6.056997558424284E-4 20-21 0.0 0.0 0.0 6.056997558424284E-5 7.874096825951569E-4 22-23 0.0 0.0 0.0 1.2113995116848568E-4 8.782646459715212E-4 24-25 0.0 0.0 0.0 2.4227990233697137E-4 9.085496337636426E-4 26-27 0.0 0.0 0.0 3.6341985350545704E-4 9.38834621555764E-4 28-29 0.0 0.0 0.0 0.0012113995116848568 9.691196093478855E-4 30-31 0.0 0.0 0.0 0.003937048412975785 9.994045971400069E-4 32-33 0.0 0.0 0.0 0.009479201178934006 0.001090259560516371 34-35 0.0 0.0 0.0 0.01705044812696436 0.001090259560516371 36-37 0.0 0.0 0.0 0.028467888524594136 0.001090259560516371 38-39 0.0 0.0 0.0 0.04476121195675546 0.001090259560516371 40-41 0.0 0.0 0.0 0.06665725813045925 0.001150829536100614 42-43 0.0 0.0 0.0 0.08703905491455696 0.0011811145238927352 44-45 0.0 0.0 0.0 0.11235730470877048 0.0012719694872690996 46-47 0.0 0.0 0.0 0.1401286385141458 0.0014233944262297066 48-49 0.0 0.0 0.0 0.16847538708757148 0.0015748193651903138 50-51 0.0 6.056997558424284E-5 0.0 0.200032344366962 0.0015748193651903138 52-53 0.0 6.056997558424284E-5 0.0 0.23110474184167856 0.0016353893407745567 54-55 0.0 6.056997558424284E-5 0.0 0.2655084879735285 0.001726244304150921 56-57 0.0 6.056997558424284E-5 0.0 0.30403099244510695 0.0017565292919430424 58-59 0.0 6.056997558424284E-5 0.0 0.34649054532966117 0.0017565292919430424 60-61 0.0 6.056997558424284E-5 0.0 0.39258429674927 0.0017565292919430424 62-63 0.0 6.056997558424284E-5 0.0 0.4441899159470449 0.001877669243111528 64-65 0.0 6.056997558424284E-5 0.0 0.49679493974195976 0.001877669243111528 66-67 0.0 6.056997558424284E-5 0.0 0.5555781010464674 0.001938239218695771 68-69 0.0 6.056997558424284E-5 0.0 0.6236587536031564 0.0020593791698642564 70-71 0.0 6.056997558424284E-5 0.0 0.7013094623021559 0.002180519121032742 72-73 0.0 6.056997558424284E-5 0.0 0.7812315450855642 0.0023319440599933496 74-75 0.0 6.056997558424284E-5 0.0 0.863485571928966 0.002392514035577592 76-77 0.0 1.2113995116848568E-4 0.0 0.9516754563796235 0.0024227990233697135 78-79 0.0 1.2113995116848568E-4 0.0 1.0567340790304929 0.002453084011161835 80-81 0.0 1.2113995116848568E-4 0.0 1.170514778165493 0.002513653986746078 82-83 0.0 1.2113995116848568E-4 0.0 1.293774678479427 0.0026045089501224423 84-85 0.0 1.2113995116848568E-4 0.0 1.4148237746845365 0.0026045089501224423 86-87 0.0 1.2113995116848568E-4 0.0 1.5495919703594767 0.0026347939379145636 88-89 0.0 1.2113995116848568E-4 0.0 1.7009866243322918 0.002665078925706685 90-91 0.0 1.2113995116848568E-4 0.0 1.8664940826162353 0.002695363913498806 92-93 0.0 1.2113995116848568E-4 0.0 2.0544427168541413 0.0027862188768751706 94-95 0.0 1.2113995116848568E-4 0.0 2.247933503858005 0.0028467888524594137 96-97 0.0 1.2113995116848568E-4 0.0 2.4514486218210605 0.0029679288036278994 98-99 0.0 1.2113995116848568E-4 0.0 2.675375821556006 0.003028498779212142 100-101 0.0 1.2113995116848568E-4 0.0 2.9251361158776317 0.003028498779212142 102-103 0.0 1.2113995116848568E-4 0.0 3.1992152553963304 0.003089068754796385 104-105 0.0 1.2113995116848568E-4 0.0 3.484378700446946 0.003089068754796385 106-107 0.0 1.2113995116848568E-4 0.0 3.777476812299097 0.003149638730380628 108-109 0.0 1.2113995116848568E-4 0.0 4.081356379805243 0.003240493693756992 110-111 0.0 1.2113995116848568E-4 0.0 4.420457388113627 0.0033616336449254778 112-113 0.0 1.2113995116848568E-4 0.0 4.78439208641155 0.003391918632717599 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2475 0.0 78.28845 1 GTATCAA 4995 0.0 61.708435 1 TCAACGC 6785 0.0 44.84837 4 CAACGCA 6915 0.0 44.063286 5 ATCAACG 7170 0.0 42.35714 3 AACGCAG 7305 0.0 41.859814 6 TATCAAC 7420 0.0 41.17078 2 ACGCAGA 8540 0.0 35.66591 7 GTACATG 8090 0.0 33.97363 1 CGCAGAG 9055 0.0 33.571728 8 GTGGTAT 1105 0.0 32.912216 1 TACATGG 8515 0.0 32.02996 2 GCAGAGT 9535 0.0 31.19445 9 ACATGGG 8690 0.0 31.04231 3 CATGGGG 6980 0.0 30.03052 4 AGAGTAC 8905 0.0 27.723127 10-11 TGGTATC 1185 0.0 26.633799 2 CAGAGTA 9215 0.0 26.37089 10-11 GAGTACT 5470 0.0 25.826462 12-13 GTACTTT 5685 0.0 24.851994 14-15 >>END_MODULE