##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921504_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1739448 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25241225952141 31.0 31.0 34.0 28.0 34.0 2 31.302772488743557 33.0 31.0 34.0 28.0 34.0 3 31.38949195376924 33.0 31.0 34.0 28.0 34.0 4 34.9314891850748 37.0 35.0 37.0 32.0 37.0 5 34.59500312742893 37.0 35.0 37.0 31.0 37.0 6 34.57453341519839 37.0 35.0 37.0 31.0 37.0 7 34.41184789657409 37.0 35.0 37.0 30.0 37.0 8 34.37290163316178 37.0 35.0 37.0 30.0 37.0 9 35.953672084477375 39.0 37.0 39.0 30.0 39.0 10-11 35.824112304593186 39.0 36.0 39.0 30.0 39.0 12-13 35.7412345755665 39.0 35.0 39.0 30.0 39.0 14-15 36.91257197685702 40.0 37.0 41.0 30.0 41.0 16-17 36.890205111046726 40.0 37.0 41.0 30.0 41.0 18-19 36.89731857462827 40.0 37.0 41.0 30.0 41.0 20-21 36.87230316744163 40.0 37.0 41.0 30.0 41.0 22-23 36.8133229622271 40.0 37.0 41.0 30.0 41.0 24-25 36.74821063923728 40.0 36.5 41.0 30.0 41.0 26-27 36.62184066439468 40.0 36.0 41.0 30.0 41.0 28-29 36.43155213607995 40.0 36.0 41.0 29.0 41.0 30-31 36.3895718641776 40.0 36.0 41.0 29.0 41.0 32-33 36.27404038522566 40.0 35.5 41.0 29.0 41.0 34-35 36.15447774236424 40.0 35.0 41.0 29.0 41.0 36-37 36.032840015913095 40.0 35.0 41.0 28.0 41.0 38-39 35.85797304662169 40.0 35.0 41.0 27.5 41.0 40-41 35.650798126762055 39.5 35.0 41.0 27.0 41.0 42-43 35.49056022370315 39.0 35.0 41.0 26.0 41.0 44-45 35.28678494556894 39.0 35.0 41.0 25.5 41.0 46-47 35.02458883507872 39.0 35.0 41.0 24.5 41.0 48-49 34.77969361544582 39.0 34.0 41.0 24.0 41.0 50-51 34.5667412880408 39.0 34.0 41.0 23.0 41.0 52-53 34.3669741780151 38.0 34.0 41.0 23.0 41.0 54-55 34.14927408005298 38.0 34.0 40.0 22.5 41.0 56-57 33.88292377811811 38.0 33.0 40.0 22.0 41.0 58-59 33.73636607705433 37.0 33.0 40.0 21.5 41.0 60-61 33.61533227782607 37.0 33.0 40.0 22.0 41.0 62-63 33.34186535038702 36.5 33.0 40.0 21.0 41.0 64-65 33.04785598649686 36.0 33.0 39.0 20.0 41.0 66-67 32.74313920278158 35.5 33.0 39.0 20.0 41.0 68-69 32.42397818158405 35.0 32.5 39.0 20.0 41.0 70-71 32.122829196388736 35.0 32.0 37.5 18.5 40.0 72-73 31.80791607452479 35.0 32.0 37.0 18.0 39.5 74-75 31.525757884110362 35.0 32.0 36.5 18.0 39.0 76-77 31.233159312609516 35.0 32.0 36.0 16.0 39.0 78-79 30.956150456926565 35.0 31.5 36.0 14.0 37.0 80-81 30.73115292897517 35.0 31.0 35.0 12.5 37.0 82-83 30.5458516149951 35.0 31.0 35.0 11.0 36.5 84-85 30.354409272366865 35.0 31.0 35.0 10.0 36.0 86-87 30.214126837939393 35.0 31.0 35.0 8.0 36.0 88-89 30.115005737452343 35.0 31.0 35.0 7.0 36.0 90-91 30.013453118460568 35.0 31.0 35.0 7.0 35.0 92-93 30.072750378280926 35.0 31.0 35.0 7.0 35.0 94-95 30.044234435292115 35.0 31.0 35.0 7.0 35.0 96-97 30.021715797195434 35.0 31.0 35.0 5.0 35.0 98-99 29.982324565034425 35.0 31.0 35.0 2.0 35.0 100-101 29.93539703400159 35.0 31.0 35.0 2.0 35.0 102-103 29.04195152715114 33.5 29.5 35.0 2.0 35.0 104-105 29.752461413045978 34.5 31.0 35.0 2.0 35.0 106-107 29.862092456917367 35.0 31.0 35.0 2.0 35.0 108-109 29.86917200169249 35.0 31.0 35.0 2.0 35.0 110-111 29.837716332997594 35.0 31.0 35.0 2.0 35.0 112-113 29.791273151022622 35.0 31.0 35.0 2.0 35.0 114-115 29.728268680638916 35.0 31.0 35.0 2.0 35.0 116-117 29.65046123827789 35.0 31.0 35.0 2.0 35.0 118-119 29.555598385234855 35.0 31.0 35.0 2.0 35.0 120-121 29.42456112513855 35.0 31.0 35.0 2.0 35.0 122-123 29.30750588692505 35.0 31.0 35.0 2.0 35.0 124-125 28.3835205191532 34.0 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 26683.0 3 10104.0 4 5969.0 5 4882.0 6 5353.0 7 6326.0 8 7157.0 9 8129.0 10 9124.0 11 9734.0 12 10362.0 13 11689.0 14 14351.0 15 12106.0 16 7160.0 17 6052.0 18 5403.0 19 5034.0 20 4960.0 21 5340.0 22 6186.0 23 8301.0 24 11727.0 25 15927.0 26 20074.0 27 23230.0 28 26772.0 29 31904.0 30 37281.0 31 45300.0 32 55861.0 33 71741.0 34 98649.0 35 155142.0 36 309219.0 37 490494.0 38 155418.0 39 304.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.03812004432229 17.56296498827186 12.245556978601545 25.153357988804302 2 17.24668625935942 19.73486625457623 37.054852640874216 25.96359484519013 3 19.1258096883724 24.31195535609038 29.03383656442 27.52839839111722 4 13.474791784227543 15.496637543206319 35.29282509069804 35.7357455818681 5 14.33511120056355 37.128538363116206 33.48282752771029 15.053522908609956 6 33.879295028039834 34.93246347461638 16.604883007797564 14.583358489546228 7 29.674599012884023 31.355479045634567 20.554125785989946 18.415796155491464 8 28.22880626070079 33.21461136810248 19.0965862116942 19.45999615950253 9 27.891649246746557 14.004063498195919 18.62223954632319 39.482047708734335 10-11 26.50947298703158 24.69013399044063 26.828501952320433 21.97189107020736 12-13 26.858923629686203 22.359544974095556 27.157134450996296 23.624396945221942 14-15 24.290633866178375 23.367070923677925 24.568602481883172 27.773692728260524 16-17 24.292501578958415 26.339958586299673 25.067218925997803 24.30032090874411 18-19 24.277646072662705 25.25308797949597 27.024394815235787 23.444871132605538 20-21 25.39341715500032 24.220093971647515 26.802905623579846 23.583583249772317 22-23 25.064558925201336 23.960553152772448 26.662354593292427 24.31253332873379 24-25 24.52761572541499 24.496452608056813 26.725449198800277 24.25048246772792 26-27 24.247809539853165 24.548418375516405 26.798112002879314 24.405660081751115 28-29 24.37577638948023 24.52682106725398 26.85349557459793 24.24390696866786 30-31 24.643475080775517 24.50296967532815 26.629325062288718 24.22423018160762 32-33 24.291506239379313 24.547394530527924 26.65383727505562 24.50726195503714 34-35 24.48375825542592 24.581740899732534 26.703346906574644 24.231153938266907 36-37 24.699551141494357 24.4635216576457 26.468996046721767 24.367931154138176 38-39 24.687415634781516 24.693625777381914 26.33468471019766 24.284273877638913 40-41 24.652772387607033 24.580644716166546 26.449467221149938 24.317115675076483 42-43 24.609821816401585 24.606688374614752 26.31711638263981 24.46637342634385 44-45 24.636640756551966 24.643339417710973 26.16675296343882 24.55326686229824 46-47 24.742282267795296 24.831118232043565 25.88435627419091 24.542243225970232 48-49 24.877212623775684 24.97082515014374 25.44446543251086 24.707496793569717 50-51 24.75109188383598 25.193508954712406 25.384804242880044 24.67059491857157 52-53 24.96505322088262 25.104064061715636 25.42782850403635 24.503054213365395 54-55 24.758625943883747 25.058886271082407 25.53707757923017 24.64541020580367 56-57 24.77131665714059 25.134467185636595 25.407196653874507 24.68701950334831 58-59 24.706540882455933 24.9822760180293 25.530813854202783 24.780369245311984 60-61 24.78993601910859 25.134421972580274 25.602275412811014 24.47336659550012 62-63 24.655065985189164 25.14248321439487 25.653045071071258 24.549405729344713 64-65 24.709064469554047 24.831999429600184 25.741879133889285 24.717056966956484 66-67 24.66469453524107 25.08910526754579 25.554194804037405 24.692005393175737 68-69 24.823514156388608 25.035242540269074 25.456399162632064 24.684844140710243 70-71 24.621110084133875 24.86883999327274 25.759971941001353 24.75007798159203 72-73 24.888573024595154 25.101407675674835 25.38485179630088 24.62516750342913 74-75 24.695262721800265 25.256695767574538 25.33627619929838 24.711765311326815 76-77 24.688106236495337 25.00779087564842 25.390377492361495 24.913725395494744 78-79 24.66718115811181 25.055062469305906 25.340380946027853 24.93737542655443 80-81 24.613797570729147 25.225614785736035 25.207013012328634 24.953574631206184 82-83 24.757034968508766 25.139345372129547 25.218084239376502 24.88553541998518 84-85 24.62668717388492 25.201885897454325 25.131021000733085 25.040405927927665 86-87 24.479513442093605 25.20276120921921 25.325084893499337 24.992640455187846 88-89 24.583202038765055 25.055632479477797 25.252516830621957 25.10864865113519 90-91 24.461850669651906 25.039435679522683 25.31665693531801 25.1820567155074 92-93 24.47673648113135 25.283583831546075 25.246011255674333 24.99366843164824 94-95 24.4830808830695 24.995148964868157 25.417929253366044 25.1038408986963 96-97 24.472162064427707 25.00927040077452 25.37977023203885 25.13879730275893 98-99 24.516362331855067 25.00304698917227 25.248185891635266 25.232404787337405 100-101 24.395794385672186 25.033800556735347 25.391886658964097 25.17851839862837 102-103 24.410331561925354 24.839102937612843 25.514541460978958 25.236024039482842 104-105 24.336980071098882 25.060041962540712 25.343155446233588 25.25982252012681 106-107 24.28773217188941 24.998763972855695 25.380092719282715 25.333411135972185 108-109 24.36241149575516 24.936670247997323 25.310223065053624 25.390695191193895 110-111 24.351356214683257 25.010822467269584 25.29904791032961 25.338773407717554 112-113 24.274000987757667 25.00990344927508 25.374448123461658 25.341647439505593 114-115 24.087771266940035 25.130885085869757 25.381803861372337 25.399539785817872 116-117 24.04432016700986 25.084682129030757 25.347632968119044 25.523364735840342 118-119 24.07695416867661 24.861249179971587 25.424503052719277 25.637293598632528 120-121 23.890727981860245 24.944463097280416 25.4946291330724 25.67017978778694 122-123 23.89435985911505 24.99221729373385 25.4048516370416 25.708571210109497 124-125 23.869178268487538 25.031037542344176 25.380141608247847 25.71964258092044 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21.0 1 21.5 2 48.5 3 75.5 4 57.0 5 50.0 6 94.0 7 191.0 8 327.0 9 392.0 10 353.5 11 332.5 12 380.0 13 449.5 14 533.5 15 682.0 16 791.0 17 911.0 18 1095.0 19 1312.0 20 1507.5 21 1697.5 22 1942.0 23 2293.0 24 2695.5 25 3246.5 26 4271.5 27 5437.5 28 6285.0 29 7584.0 30 9594.5 31 11477.5 32 13758.0 33 16169.5 34 18882.5 35 21913.5 36 25426.0 37 28796.5 38 31148.5 39 34062.0 40 36650.5 41 38584.0 42 40973.5 43 45645.5 44 51268.0 45 55082.5 46 58554.5 47 62548.0 48 67378.5 49 71309.0 50 71949.0 51 72032.0 52 71964.5 53 72575.5 54 74463.5 55 74032.5 56 70281.0 57 64938.5 58 61142.5 59 57074.0 60 50607.5 61 44149.0 62 37509.0 63 29557.5 64 22449.5 65 17459.5 66 13499.0 67 10427.5 68 8382.5 69 6653.5 70 5449.5 71 4422.0 72 3487.0 73 3108.0 74 2544.0 75 1882.0 76 1293.5 77 788.0 78 490.5 79 278.5 80 136.0 81 54.0 82 31.5 83 16.0 84 11.5 85 8.5 86 4.0 87 2.5 88 1.5 89 1.0 90 0.5 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1249246887518339 2 0.0013797480580046084 3 0.020293794353151116 4 0.056742138885439525 5 0.027192534643174154 6 0.018109193261310486 7 0.013797480580046083 8 0.005174055217517281 9 0.003449370145011521 10-11 0.006180121509812308 12-13 0.004282967930055972 14-15 0.0024720486039249232 16-17 0.009686981157240688 18-19 0.004742883949390841 20-21 0.011497900483371737 22-23 0.008364722601652937 24-25 0.01221651926358247 26-27 0.008307233099236078 28-29 0.013078861799835351 30-31 0.021213626391820853 32-33 0.01221651926358247 34-35 0.020954923630944988 36-37 0.014861036374757969 38-39 0.020552497114026978 40-41 0.009830704913282834 42-43 0.008422212104069796 44-45 0.01693065846176488 46-47 0.016528231944846872 48-49 0.020954923630944988 50-51 0.014487354609048387 52-53 0.021558563406322007 54-55 0.016700700452097445 56-57 0.020811199874902844 58-59 0.01603957117430357 60-61 0.01925898330964766 62-63 0.022047224176865304 64-65 0.018224172266144204 66-67 0.0122452640147909 68-69 0.024576762283207085 70-71 0.014688567867507394 72-73 0.017505553485933467 74-75 0.018799067290312787 76-77 0.013452543565544933 78-79 0.02954960424226536 80-81 0.021069902635778705 82-83 0.008882128123404666 84-85 0.012820159038959486 86-87 0.012072795507540323 88-89 0.020466262860401693 90-91 0.012848903790167916 92-93 0.008479701606486655 94-95 0.00738740106056634 96-97 0.0023570695990912057 98-99 0.0014947270628383256 100-101 0.011584134736997025 102-103 0.0034206253938030913 104-105 0.002270835345465918 106-107 2.2995800966743474E-4 108-109 0.019345217563272947 110-111 6.323845265854455E-4 112-113 0.008910872874613096 114-115 0.0023283248478827767 116-117 0.008594680611320373 118-119 0.010290620932617704 120-121 0.0036793281546789558 122-123 8.335977850444509E-4 124-125 0.02443303852716494 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1739448.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.093400669274715 #Duplication Level Percentage of deduplicated Percentage of total 1 79.56115293222003 44.62855629136459 2 10.363376577580095 11.626340693055544 3 3.591793751480251 6.0442777806953725 4 1.8016317427274042 4.042386048131679 5 1.0377727302891195 2.910610078187737 6 0.6877339176770515 2.314640051886531 7 0.5112496395179666 2.00744116100525 8 0.3702589838085656 1.6615268424137897 9 0.2987759679301057 1.5083424071508411 >10 1.6552106342157695 16.78791672758602 >50 0.09212315817260397 3.481946763576957 >100 0.028508360446911865 2.617641896519678 >500 1.0290098353711756E-4 0.05373793537992089 >1k 3.087029506113527E-4 0.31463532304613184 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2269 0.13044368098385234 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2108 0.12118787109473811 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 5.7489502416858684E-5 3 0.0 0.0 0.0 0.0 5.7489502416858684E-5 4 0.0 0.0 0.0 0.0 5.7489502416858684E-5 5 0.0 0.0 0.0 0.0 5.7489502416858684E-5 6 0.0 0.0 0.0 0.0 1.1497900483371737E-4 7 0.0 0.0 0.0 0.0 1.1497900483371737E-4 8 0.0 0.0 0.0 0.0 1.1497900483371737E-4 9 0.0 0.0 0.0 0.0 1.1497900483371737E-4 10-11 0.0 0.0 0.0 0.0 1.1497900483371737E-4 12-13 0.0 0.0 0.0 0.0 3.449370145011521E-4 14-15 0.0 0.0 0.0 0.0 4.024265169180108E-4 16-17 0.0 0.0 0.0 0.0 4.5991601933486947E-4 18-19 0.0 0.0 0.0 0.0 4.5991601933486947E-4 20-21 0.0 0.0 0.0 0.0 5.461502729601575E-4 22-23 0.0 0.0 0.0 8.623425362528802E-5 6.611292777938748E-4 24-25 0.0 0.0 0.0 2.012132584590054E-4 7.186187802107336E-4 26-27 0.0 0.0 0.0 2.874475120842934E-4 7.473635314191628E-4 28-29 0.0 0.0 0.0 0.001092300545920315 7.473635314191628E-4 30-31 0.0 0.0 0.0 0.004110499422805396 7.473635314191628E-4 32-33 0.0 0.0 0.0 0.009859449664491263 8.335977850444508E-4 34-35 0.0 0.0 0.0 0.017649277241975615 9.773215410865976E-4 36-37 0.0 0.0 0.0 0.02975081750072437 9.773215410865976E-4 38-39 0.0 0.0 0.0 0.04941222732729004 9.773215410865976E-4 40-41 0.0 0.0 0.0 0.07030966145581817 9.773215410865976E-4 42-43 0.0 0.0 0.0 0.09103462707709573 0.0010348110435034561 44-45 0.0 0.0 0.0 0.11546766560426067 0.0011210452971287441 46-47 0.0 0.0 0.0 0.1453622068610272 0.001178534799545603 48-49 0.0 2.8744751208429342E-5 0.0 0.17787252047776075 0.001264769053170891 50-51 0.0 5.7489502416858684E-5 0.0 0.21136015563558094 0.0013222585555877496 52-53 0.0 5.7489502416858684E-5 0.0 0.24366925599385553 0.0014947270628383256 54-55 0.0 5.7489502416858684E-5 0.0 0.2778755099318864 0.0015522165652551844 56-57 0.0 5.7489502416858684E-5 0.0 0.31806067212127065 0.0015809613164636136 58-59 0.0 5.7489502416858684E-5 0.0 0.36330491052333846 0.0016384508188804726 60-61 0.0 5.7489502416858684E-5 0.0 0.4148155046888438 0.0016671955700889019 62-63 0.0 5.7489502416858684E-5 0.0 0.46782082591718754 0.0017246850725057604 64-65 0.0 5.7489502416858684E-5 0.0 0.5239305802760416 0.0017246850725057604 66-67 0.0 5.7489502416858684E-5 0.0 0.5888937180070919 0.0017246850725057604 68-69 0.0 5.7489502416858684E-5 0.0 0.6619916203301277 0.0017246850725057604 70-71 0.0 5.7489502416858684E-5 0.0 0.7401485988658472 0.0017246850725057604 72-73 0.0 5.7489502416858684E-5 0.0 0.8259804259742172 0.0018109193261310486 74-75 0.0 5.7489502416858684E-5 0.0 0.9110648895511679 0.0018396640773394779 76-77 0.0 5.7489502416858684E-5 0.0 1.002990603915725 0.0018684088285479072 78-79 0.0 5.7489502416858684E-5 0.0 1.1111858474642529 0.0018971535797563364 80-81 0.0 5.7489502416858684E-5 0.0 1.2303328412231926 0.0019833878333816246 82-83 0.0 5.7489502416858684E-5 0.0 1.3568672360426985 0.0021846010918406297 84-85 0.0 5.7489502416858684E-5 0.0 1.4854712529492113 0.0021846010918406297 86-87 0.0 5.7489502416858684E-5 0.0 1.6237047615105482 0.0022708353454659177 88-89 0.0 5.7489502416858684E-5 0.0 1.7808523163670316 0.002357069599091206 90-91 0.0 5.7489502416858684E-5 0.0 1.964272573828019 0.002357069599091206 92-93 0.0 5.7489502416858684E-5 0.0 2.155913830134617 0.0024145591015080647 94-95 0.0 5.7489502416858684E-5 0.0 2.3566384278230794 0.002529538106341782 96-97 0.0 5.7489502416858684E-5 0.0 2.5625945702314756 0.0025870276087586407 98-99 0.0 5.7489502416858684E-5 0.0 2.7898218285341096 0.0025870276087586407 100-101 0.0 5.7489502416858684E-5 0.0 3.0533249628617813 0.0025870276087586407 102-103 0.0 5.7489502416858684E-5 0.0 3.3357421434846 0.002702006613592358 104-105 0.0 5.7489502416858684E-5 0.0 3.6285074345424526 0.002702006613592358 106-107 0.0 5.7489502416858684E-5 0.0 3.9244059034820244 0.0027594961160092167 108-109 0.0 5.7489502416858684E-5 0.0 4.238787247448617 0.0028744751208429342 110-111 0.0 5.7489502416858684E-5 0.0 4.583436814437684 0.0031619226329272273 112-113 0.0 5.7489502416858684E-5 0.0 4.972612001048608 0.0031619226329272273 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2285 0.0 76.42347 1 GTATCAA 4755 0.0 62.294712 1 TCAACGC 6285 0.0 46.507336 4 CAACGCA 6390 0.0 45.630276 5 ATCAACG 6670 0.0 43.912132 3 AACGCAG 6715 0.0 43.591522 6 TATCAAC 7010 0.0 41.700977 2 ACGCAGA 8055 0.0 35.8956 7 GTACATG 8900 0.0 35.29116 1 CGCAGAG 8475 0.0 34.25513 8 TACATGG 9230 0.0 33.60615 2 ACATGGG 9165 0.0 33.451843 3 GCAGAGT 8985 0.0 31.64866 9 CATGGGG 7665 0.0 30.98889 4 AGAGTAC 8470 0.0 27.9896 10-11 ATGGGGG 3855 0.0 27.63036 5 TACCGTA 180 7.3006777E-7 26.441614 7 CAGAGTA 8730 0.0 26.065674 10-11 ACCGTAT 245 1.6249032E-8 24.281717 8 GAGTACT 4735 0.0 23.370926 12-13 >>END_MODULE