##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921501_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2046099 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16296376666036 31.0 31.0 34.0 28.0 34.0 2 31.214539961165123 33.0 31.0 34.0 28.0 34.0 3 31.304810764288533 33.0 31.0 34.0 28.0 34.0 4 34.837615872936745 37.0 35.0 37.0 32.0 37.0 5 34.484060155447025 37.0 35.0 37.0 30.0 37.0 6 34.459765143328845 37.0 35.0 37.0 30.0 37.0 7 34.296619078548986 37.0 35.0 37.0 30.0 37.0 8 34.25793424462844 37.0 35.0 37.0 30.0 37.0 9 35.82705871025791 39.0 37.0 39.0 30.0 39.0 10-11 35.69076398551585 39.0 35.0 39.0 30.0 39.0 12-13 35.61108577835188 39.0 35.0 39.0 30.0 39.0 14-15 36.773770721749045 40.0 37.0 41.0 30.0 41.0 16-17 36.74427557024367 40.0 36.5 41.0 30.0 41.0 18-19 36.75382031856718 40.0 37.0 41.0 30.0 41.0 20-21 36.73155111262945 40.0 37.0 41.0 30.0 41.0 22-23 36.66823355077149 40.0 36.5 41.0 30.0 41.0 24-25 36.60485734072496 40.0 36.0 41.0 29.5 41.0 26-27 36.48129147221127 40.0 36.0 41.0 29.0 41.0 28-29 36.29056414181328 40.0 36.0 41.0 28.5 41.0 30-31 36.249130174053164 40.0 36.0 41.0 29.0 41.0 32-33 36.13645796220027 40.0 35.0 41.0 28.0 41.0 34-35 36.02399517325408 40.0 35.0 41.0 28.0 41.0 36-37 35.9008923810627 40.0 35.0 41.0 27.0 41.0 38-39 35.73302415963255 40.0 35.0 41.0 27.0 41.0 40-41 35.531300782611204 39.0 35.0 41.0 26.0 41.0 42-43 35.36841057055402 39.0 35.0 41.0 26.0 41.0 44-45 35.16883616090912 39.0 35.0 41.0 25.0 41.0 46-47 34.917829000454034 39.0 34.5 41.0 24.0 41.0 48-49 34.68549126899529 39.0 34.0 41.0 23.0 41.0 50-51 34.47186597520452 39.0 34.0 41.0 23.0 41.0 52-53 34.2707139292869 38.0 34.0 40.5 22.5 41.0 54-55 34.05196229507956 38.0 33.5 40.0 22.0 41.0 56-57 33.79279179550941 37.5 33.0 40.0 21.0 41.0 58-59 33.642032961259446 37.0 33.0 40.0 21.5 41.0 60-61 33.52119692155658 37.0 33.0 40.0 21.0 41.0 62-63 33.24508564834839 36.0 33.0 40.0 20.0 41.0 64-65 32.94459896613019 36.0 33.0 39.0 20.0 41.0 66-67 32.64158112583995 35.0 33.0 39.0 19.5 41.0 68-69 32.32163155350743 35.0 32.0 38.5 18.0 40.5 70-71 32.01820146532499 35.0 32.0 37.5 18.0 40.0 72-73 31.708525589426515 35.0 32.0 37.0 17.5 39.0 74-75 31.414521975720625 35.0 32.0 36.5 15.5 39.0 76-77 31.130007883294013 35.0 32.0 36.0 13.5 39.0 78-79 30.855479133707604 35.0 31.0 35.5 11.5 37.0 80-81 30.634096639507668 35.0 31.0 35.0 10.5 37.0 82-83 30.45283879225785 35.0 31.0 35.0 9.0 36.5 84-85 30.263710846835856 35.0 31.0 35.0 7.0 36.0 86-87 30.12464914943021 35.0 31.0 35.0 7.0 36.0 88-89 30.0222652960585 35.0 31.0 35.0 7.0 36.0 90-91 29.92701917160411 35.0 31.0 35.0 7.0 35.0 92-93 29.989813787113917 35.0 31.0 35.0 5.5 35.0 94-95 29.955948123722266 35.0 31.0 35.0 2.0 35.0 96-97 29.933458498342457 35.0 31.0 35.0 2.0 35.0 98-99 29.89649083450996 35.0 31.0 35.0 2.0 35.0 100-101 29.84721829197903 35.0 31.0 35.0 2.0 35.0 102-103 28.950275377682118 33.5 29.5 35.0 2.0 35.0 104-105 29.665116643916058 34.5 31.0 35.0 2.0 35.0 106-107 29.776406713458147 35.0 31.0 35.0 2.0 35.0 108-109 29.78295062946612 35.0 31.0 35.0 2.0 35.0 110-111 29.75096146374149 35.0 31.0 35.0 2.0 35.0 112-113 29.699515272721406 35.0 31.0 35.0 2.0 35.0 114-115 29.633364025885356 35.0 31.0 35.0 2.0 35.0 116-117 29.55345073723217 35.0 31.0 35.0 2.0 35.0 118-119 29.460977205892775 35.0 31.0 35.0 2.0 35.0 120-121 29.333049378353635 35.0 31.0 35.0 2.0 35.0 122-123 29.20924598467621 35.0 31.0 35.0 2.0 35.0 124-125 28.287977023594657 34.0 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 35588.0 3 12717.0 4 7270.0 5 6085.0 6 6500.0 7 7639.0 8 8786.0 9 9598.0 10 10950.0 11 11450.0 12 12165.0 13 13561.0 14 16438.0 15 13476.0 16 7991.0 17 6988.0 18 6378.0 19 5855.0 20 5658.0 21 6292.0 22 7302.0 23 10151.0 24 13759.0 25 18766.0 26 23352.0 27 27254.0 28 32038.0 29 38073.0 30 44516.0 31 53616.0 32 66707.0 33 85079.0 34 118261.0 35 183728.0 36 362058.0 37 573175.0 38 176593.0 39 286.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.60099800653137 17.868065063214583 12.49445850952745 25.036478420726592 2 16.985800975144375 19.66177856324558 37.67829424023585 25.674126221374195 3 19.182814685323233 24.341576852249723 28.894699715047906 27.58090874737914 4 13.482620807891236 15.494011500227629 35.365669390216055 35.65769830166508 5 14.433292088465107 37.29261254055841 33.24447190843151 15.029623462544983 6 33.789255457011414 34.87276302005552 16.672622332721147 14.665359190211916 7 29.764205681392692 31.443087821383287 20.40766148230052 18.385045014923506 8 27.90093310217985 33.56860874372119 19.108384234185138 19.42207391991382 9 27.864528984852033 14.396556822352894 18.72007906092667 39.01883513186841 10-11 26.5320930250745 24.835760331543938 26.67779600897972 21.954350634401838 12-13 26.824410501190982 22.45575688912469 27.042079495248405 23.677753114435923 14-15 24.297810196145896 23.534013219760432 24.498760525271404 27.669416058822264 16-17 24.29942926913554 26.474844266700163 24.959192486578548 24.266533977585745 18-19 24.271432296497014 25.43063030566962 26.889293095472176 23.408644302361186 20-21 25.355922874843557 24.405630244933203 26.67848249389555 23.559964386327692 22-23 25.094511941045177 24.053334819227963 26.49318358057105 24.35896965915581 24-25 24.507084593529466 24.658564751168548 26.537695903216935 24.29665475208505 26-27 24.190138745377354 24.638302052977995 26.706212308874406 24.465346892770246 28-29 24.364739103720623 24.69499900528543 26.723679045934308 24.21658284505964 30-31 24.689961493581695 24.595809707801937 26.436633550592898 24.277595248023474 32-33 24.24460088790694 24.763927466825688 26.476343866586667 24.5151277786807 34-35 24.507470646709745 24.788849648239587 26.54627073831924 24.15740896673143 36-37 24.697593752535735 24.55305075184846 26.284218367959454 24.46513712765635 38-39 24.635168564894105 24.803233614574243 26.229146771677176 24.332451048854477 40-41 24.681542750084436 24.662895508483153 26.36416914196783 24.291392599464583 42-43 24.593632684662484 24.726556972561973 26.176577904654746 24.503232438120797 44-45 24.549585550760195 24.73785602868809 26.051081107107642 24.66147731344407 46-47 24.72704307088277 24.880410256610798 25.76370748246115 24.628839190045284 48-49 24.864021939317354 25.081484179175977 25.356507796450263 24.697986085056407 50-51 24.722404711347824 25.235117685933606 25.335812578454032 24.706665024264538 52-53 24.962132516759585 25.10751627684607 25.39632840011136 24.534022806282984 54-55 24.700223514071364 25.10487074923041 25.518096818621206 24.676808918077022 56-57 24.690403876715898 25.168638412552692 25.31873747646835 24.822220234263064 58-59 24.78455771487342 24.906738829862245 25.527103114848536 24.781600340415796 60-61 24.805546736120636 25.080419803472846 25.580817839032317 24.533215621374204 62-63 24.681667960893098 25.217470370280747 25.522218531415973 24.578643137410182 64-65 24.714769234379034 24.89111370515498 25.643492339097584 24.750624721368403 66-67 24.699264391941085 25.187812353591415 25.40051034810081 24.71241290636669 68-69 24.844304359037974 25.049185376745687 25.323068913301988 24.78344135091435 70-71 24.59230948209789 24.85281983701178 25.68890190205065 24.865968778839687 72-73 24.903902439620524 25.158117668337237 25.29943796950444 24.6385419225378 74-75 24.65728581264575 25.369489974416965 25.240927089935116 24.732297123002173 76-77 24.64737890197681 25.030916668214537 25.337346064320354 24.984358365488298 78-79 24.724963663376936 25.075887686712555 25.338494038251596 24.860654611658912 80-81 24.67589763644807 25.315376530687068 25.130691956101973 24.87803387676289 82-83 24.762367938061942 25.219864950401167 25.195083862232792 24.8226832493041 84-85 24.597431804689872 25.247264745640347 25.11057229241774 25.04473115725204 86-87 24.39780597766727 25.36337914437235 25.30719172131234 24.93162315664804 88-89 24.51861090885449 25.12650510089978 25.25734252641618 25.097541463829547 90-91 24.450469685283 25.059584385469424 25.385025598312282 25.104920330935293 92-93 24.589379489405296 25.292898870341478 25.271905951724595 24.845815688528628 94-95 24.501016772034117 25.023345066352288 25.31871117149099 25.156926990122614 96-97 24.495414547935617 25.022995685315408 25.324798781644116 25.156790985104855 98-99 24.387407993900474 25.04863004994966 25.254806799409597 25.30915515674027 100-101 24.308539433213618 25.14069455832772 25.363195667289478 25.18757034116918 102-103 24.449151134102042 24.93839270702592 25.475678682166 25.13677747670604 104-105 24.25718221533413 25.121313403160784 25.270552654427924 25.35095172707716 106-107 24.309074452029623 25.05336992985666 25.291848476317824 25.345707141795888 108-109 24.339216120000536 24.990571491073162 25.225581506190554 25.444630882735748 110-111 24.29824027650808 25.117168685518738 25.274835374911692 25.309755663061495 112-113 24.31056250357421 25.115364481376716 25.326493335229806 25.24757967981927 114-115 24.10515470770049 25.27589719127373 25.317978233202282 25.300969867823497 116-117 24.156004817383245 25.314723323055986 25.19822339441739 25.33104846514338 118-119 24.134608146854138 24.964709804124748 25.2475934725846 25.65308857643651 120-121 23.847735157237437 25.065468760233312 25.4828168331204 25.603979249408848 122-123 23.9179898220384 25.115348195030762 25.3834696707741 25.58319231215674 124-125 23.896481009378597 25.21911503386512 25.265775818030274 25.618628138726006 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 31.5 2 64.5 3 100.0 4 82.0 5 69.0 6 121.5 7 265.5 8 461.0 9 541.0 10 432.0 11 351.0 12 357.5 13 409.0 14 514.5 15 613.0 16 737.5 17 894.5 18 1070.5 19 1238.0 20 1401.5 21 1651.5 22 1919.0 23 2175.0 24 2575.0 25 3309.0 26 4609.0 27 6124.5 28 7194.5 29 8817.5 30 11512.5 31 13960.0 32 17206.5 33 20714.0 34 23756.5 35 27129.0 36 31602.0 37 35972.5 38 38024.5 39 40483.0 40 43376.0 41 45385.5 42 48012.0 43 53378.5 44 58780.5 45 62910.5 46 67728.0 47 71988.5 48 77746.0 49 83294.5 50 83522.5 51 82991.5 52 83939.0 53 85551.0 54 87614.0 55 87619.5 56 83936.5 57 77473.5 58 73041.5 59 68328.0 60 60600.0 61 52928.5 62 45576.5 63 36050.5 64 26948.0 65 20604.0 66 15308.5 67 11209.5 68 8641.0 69 6804.0 70 5847.5 71 4971.5 72 3957.5 73 3616.5 74 2872.0 75 2027.5 76 1356.5 77 755.5 78 422.5 79 239.5 80 121.5 81 48.5 82 27.5 83 13.0 84 9.5 85 6.0 86 4.0 87 3.5 88 1.0 89 1.0 90 0.5 91 0.5 92 0.5 93 0.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11851821441679997 2 0.0021015600906896486 3 0.02404575731672808 4 0.05356534556734547 5 0.02893310636484354 6 0.02091785392593418 7 0.016274872330224493 8 0.006255806781587792 9 0.0040076262194546795 10-11 0.007624264515060122 12-13 0.005009532774318349 14-15 0.0034700178241619784 16-17 0.010434490217726513 18-19 0.005644888150573359 20-21 0.012487176817935007 22-23 0.00945702040810342 24-25 0.0140022550228508 26-27 0.009432583662862842 28-29 0.013977818277610224 30-31 0.022775046564218054 32-33 0.013513520118039253 34-35 0.02245736887609055 36-37 0.01666586025407373 38-39 0.022603989347534013 40-41 0.010752167905854019 42-43 0.009652514370028039 44-45 0.01818093845898952 46-47 0.017350089120809892 48-49 0.02231074840464709 50-51 0.01539514950156371 52-53 0.023385965195232488 54-55 0.01791213426134317 56-57 0.021993070716519583 58-59 0.017863260770862015 60-61 0.020893417180693603 62-63 0.023239344723789027 64-65 0.01891404081620684 66-67 0.011754074460717688 68-69 0.025487525285922137 70-71 0.01500416157771447 72-73 0.019133971523372036 74-75 0.01991594737107051 76-77 0.013537956863279833 78-79 0.03137678088890127 80-81 0.021944197226038426 82-83 0.008992722248532451 84-85 0.012975911722746555 86-87 0.013073658703708862 88-89 0.021040037652137068 90-91 0.012755981015581357 92-93 0.008357366872277441 94-95 0.007990815693668782 96-97 0.0030790299003127415 98-99 0.0019060661287650304 100-101 0.013024785213227707 102-103 0.003665511786086597 104-105 0.002712478721704082 106-107 1.466204714434639E-4 108-109 0.021577646047429767 110-111 5.131716500521235E-4 112-113 0.009383710172381689 114-115 0.0022970540526142673 116-117 0.008552860834202059 118-119 0.010019065548636697 120-121 0.004154246690898143 122-123 5.620451405332782E-4 124-125 0.02365476939287884 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2046099.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.56331095767953 #Duplication Level Percentage of deduplicated Percentage of total 1 78.27532275174741 41.144101301128266 2 11.120399580132457 11.690500422083023 3 3.7401776658209416 5.897883650565424 4 1.8277189912397562 3.842838467191666 5 1.0674323688091574 2.80538897640041 6 0.7321112668570354 2.3089315305256237 7 0.5064216381597965 1.863343862960359 8 0.39651148980708023 1.6673565389617866 9 0.3064523364475238 1.4497334508958757 >10 1.8522377697971215 17.96242714734821 >50 0.1281276871958072 4.594031952088712 >100 0.04615258572002456 4.230558178744405 >500 5.603209595698316E-4 0.18908392543411584 >1k 3.7354730637988745E-4 0.35382059567214597 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2513 0.12281908157914159 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2102 0.10273207699138702 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.774698096230925E-5 2 0.0 0.0 0.0 0.0 9.774698096230925E-5 3 0.0 0.0 0.0 0.0 9.774698096230925E-5 4 0.0 0.0 0.0 0.0 9.774698096230925E-5 5 0.0 0.0 0.0 0.0 9.774698096230925E-5 6 0.0 0.0 0.0 0.0 1.954939619246185E-4 7 0.0 0.0 0.0 4.8873490481154624E-5 1.954939619246185E-4 8 0.0 0.0 0.0 4.8873490481154624E-5 1.954939619246185E-4 9 0.0 0.0 0.0 4.8873490481154624E-5 1.954939619246185E-4 10-11 0.0 0.0 0.0 4.8873490481154624E-5 2.443674524057731E-4 12-13 0.0 0.0 0.0 4.8873490481154624E-5 2.443674524057731E-4 14-15 0.0 0.0 0.0 4.8873490481154624E-5 3.176776881275051E-4 16-17 0.0 0.0 0.0 4.8873490481154624E-5 3.90987923849237E-4 18-19 0.0 0.0 0.0 4.8873490481154624E-5 4.3986141433039166E-4 20-21 0.0 0.0 0.0 7.331023572173194E-5 4.3986141433039166E-4 22-23 0.0 0.0 0.0 1.466204714434639E-4 4.887349048115462E-4 24-25 0.0 0.0 0.0 2.199307071651958E-4 5.620451405332782E-4 26-27 0.0 0.0 0.0 5.376083952927009E-4 5.864818857738555E-4 28-29 0.0 0.0 0.0 0.0012951474977505976 5.864818857738555E-4 30-31 0.0 0.0 0.0 0.00427643041710103 5.864818857738555E-4 32-33 0.0 0.0 0.0 0.010849914886816327 5.864818857738555E-4 34-35 0.0 0.0 0.0 0.018767420344763378 6.842288667361648E-4 36-37 0.0 0.0 0.0 0.03130347065317954 6.842288667361648E-4 38-39 0.0 0.0 0.0 0.05114610778852832 6.842288667361648E-4 40-41 0.0 0.0 0.0 0.07265044360023634 6.842288667361648E-4 42-43 0.0 0.0 0.0 0.09566985761686017 6.842288667361648E-4 44-45 0.0 0.0 0.0 0.12218372620288656 6.842288667361648E-4 46-47 0.0 0.0 0.0 0.15170331445350396 6.842288667361648E-4 48-49 0.0 0.0 0.0 0.18283572788999947 6.842288667361648E-4 50-51 0.0 0.0 0.0 0.21756034287685982 6.842288667361648E-4 52-53 0.0 0.0 0.0 0.25318911743762157 8.55286083420206E-4 54-55 0.0 0.0 0.0 0.29067508463666714 8.797228286607833E-4 56-57 0.0 0.0 0.0 0.33346382555291804 8.797228286607833E-4 58-59 0.0 0.0 0.0 0.3844388761247623 8.797228286607833E-4 60-61 0.0 0.0 0.0 0.4397147938589482 9.285963191419379E-4 62-63 0.0 0.0 0.0 0.49662797352425275 9.774698096230924E-4 64-65 0.0 0.0 0.0 0.5530279815395052 9.774698096230924E-4 66-67 0.0 0.0 0.0 0.6167590131269308 9.774698096230924E-4 68-69 0.0 0.0 0.0 0.6914132698368944 9.774698096230924E-4 70-71 0.0 0.0 0.0 0.7760132818597731 9.774698096230924E-4 72-73 0.0 0.0 0.0 0.8639122544901298 9.774698096230924E-4 74-75 0.0 0.0 0.0 0.9494164260869098 9.774698096230924E-4 76-77 0.0 0.0 0.0 1.048776232235097 0.0010019065548636697 78-79 0.0 0.0 0.0 1.1624559710942628 0.001026343300104247 80-81 0.0 0.0 0.0 1.2938767869980876 0.0010507800453448245 82-83 0.0 0.0 0.0 1.4356587828839171 0.0010752167905854018 84-85 0.0 0.0 0.0 1.5780028239102801 0.0010752167905854018 86-87 0.0 0.0 0.0 1.7267981656801552 0.0011240902810665564 88-89 0.0 0.0 0.0 1.8976598884022717 0.0011240902810665564 90-91 0.0 0.0 0.0 2.087973260335888 0.0011240902810665564 92-93 0.0 0.0 0.0 2.290602751870755 0.0011240902810665564 94-95 0.0 0.0 0.0 2.5106800795073942 0.0011240902810665564 96-97 0.0 0.0 0.0 2.740898656418873 0.0011485270263071339 98-99 0.0 0.0 0.0 2.985730406984217 0.001172963771547711 100-101 0.0 0.0 0.0 3.261523513769373 0.001172963771547711 102-103 0.0 0.0 0.0 3.565150073383546 0.0011974005167882883 104-105 0.0 0.0 0.0 3.8846116439136136 0.0012218372620288658 106-107 0.0 0.0 0.0 4.212626075277882 0.001246274007269443 108-109 0.0 0.0 0.0 4.557061999443819 0.0012951474977505976 110-111 0.0 0.0 0.0 4.935367252513197 0.0013195842429911749 112-113 0.0 0.0 0.0 5.339599892282827 0.0013195842429911749 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2890 0.0 78.78551 1 GTATCAA 5670 0.0 58.658638 1 TCAACGC 7525 0.0 43.367214 4 CAACGCA 7675 0.0 42.569115 5 AACGCAG 8070 0.0 40.547344 6 ATCAACG 8200 0.0 40.01522 3 TATCAAC 8400 0.0 38.991585 2 GTACATG 10890 0.0 35.24835 1 ACGCAGA 9505 0.0 34.29892 7 CGCAGAG 10020 0.0 32.593834 8 TACATGG 11725 0.0 32.45454 2 ACATGGG 11645 0.0 31.654732 3 CATGGGG 9025 0.0 29.494959 4 GCAGAGT 10780 0.0 29.357094 9 ATGGGGG 4825 0.0 26.888083 5 CAGAGTA 10310 0.0 26.022795 10-11 AGAGTAC 9830 0.0 25.841068 10-11 GAGTACT 5100 0.0 24.14639 12-13 GTATAGG 780 0.0 22.924902 1 CATGGGT 2245 0.0 22.812326 4 >>END_MODULE