##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921478_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1619152 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.586675000247045 31.0 30.0 34.0 25.0 34.0 2 29.730948669426958 31.0 30.0 34.0 25.0 34.0 3 29.82375095111515 31.0 30.0 34.0 25.0 34.0 4 33.198904117711 37.0 35.0 37.0 26.0 37.0 5 33.200845874877714 37.0 35.0 37.0 26.0 37.0 6 33.22276722630117 37.0 35.0 37.0 26.0 37.0 7 33.06918003992213 37.0 35.0 37.0 26.0 37.0 8 33.00609578347184 37.0 35.0 37.0 25.0 37.0 9 34.43743823927587 39.0 35.0 39.0 25.0 39.0 10-11 34.31576621589573 39.0 35.0 39.0 24.5 39.0 12-13 34.151298642746326 39.0 35.0 39.0 22.5 39.0 14-15 35.27939254622173 40.0 36.0 41.0 23.0 41.0 16-17 35.19877812583377 40.0 35.0 41.0 22.0 41.0 18-19 35.214788049546925 40.0 35.0 41.0 22.0 41.0 20-21 35.23085016107197 40.0 35.0 41.0 22.5 41.0 22-23 35.19703060614445 40.0 35.0 41.0 23.0 41.0 24-25 35.16147001640365 40.0 35.0 41.0 23.0 41.0 26-27 35.08292365386326 40.0 35.0 41.0 23.0 41.0 28-29 35.037486906726485 40.0 35.0 41.0 23.5 41.0 30-31 34.93557430062155 40.0 35.0 41.0 23.0 41.0 32-33 34.81742202090972 40.0 34.5 41.0 23.0 41.0 34-35 34.65426470152278 39.0 34.0 41.0 21.5 41.0 36-37 34.511399176853075 39.0 34.0 41.0 20.0 41.0 38-39 34.37867754231845 39.0 34.0 41.0 18.5 41.0 40-41 34.22286419063806 39.0 33.5 41.0 17.5 41.0 42-43 34.02842475567458 39.0 33.0 41.0 15.5 41.0 44-45 33.822681564176804 39.0 33.0 41.0 15.0 41.0 46-47 33.5561090002668 38.0 33.0 41.0 10.5 41.0 48-49 33.39873680790932 38.0 33.0 40.0 8.5 41.0 50-51 33.20664767730268 38.0 33.0 40.0 8.0 41.0 52-53 33.0061609410358 38.0 32.5 40.0 7.0 41.0 54-55 32.79440843107997 37.5 32.0 40.0 4.0 41.0 56-57 32.55954814619011 37.0 32.0 40.0 2.0 41.0 58-59 32.30849450823641 36.5 32.0 40.0 2.0 41.0 60-61 32.002755454707156 36.0 31.0 40.0 2.0 41.0 62-63 31.693472879630818 35.5 31.0 39.0 2.0 41.0 64-65 31.384149233672936 35.0 31.0 39.0 2.0 41.0 66-67 31.347180190618296 35.0 31.0 39.0 2.0 40.5 68-69 31.097412719744653 35.0 31.0 38.0 2.0 40.0 70-71 30.80636468966471 35.0 31.0 37.0 2.0 40.0 72-73 30.481091336699706 35.0 31.0 37.0 2.0 39.0 74-75 30.18951617883929 35.0 30.0 36.0 2.0 39.0 76-77 29.920303035169027 35.0 30.0 36.0 2.0 38.5 78-79 29.652755887032225 35.0 30.0 35.0 2.0 37.0 80-81 29.41875129697521 35.0 30.0 35.0 2.0 37.0 82-83 29.227631192130204 35.0 30.0 35.0 2.0 36.0 84-85 29.030635171991264 34.0 30.0 35.0 2.0 36.0 86-87 28.88346029279524 34.0 29.0 35.0 2.0 36.0 88-89 28.764021228396096 34.0 29.0 35.0 2.0 35.5 90-91 28.65751238920126 34.0 29.0 35.0 2.0 35.0 92-93 28.55567636639426 34.0 29.0 35.0 2.0 35.0 94-95 28.48708120052966 34.0 29.0 35.0 2.0 35.0 96-97 28.38823223514531 34.0 29.0 35.0 2.0 35.0 98-99 28.332422774390544 34.0 29.0 35.0 2.0 35.0 100-101 28.271081714378887 34.0 29.0 35.0 2.0 35.0 102-103 27.303289932013794 32.5 26.0 34.5 2.0 35.0 104-105 28.119173184481753 34.0 29.0 35.0 2.0 35.0 106-107 28.441682436238228 34.0 29.0 35.0 2.0 35.0 108-109 28.48339809974604 35.0 30.0 35.0 2.0 35.0 110-111 28.427252969455616 35.0 29.0 35.0 2.0 35.0 112-113 28.354883296935682 34.0 29.0 35.0 2.0 35.0 114-115 28.237446824016523 34.0 29.0 35.0 2.0 35.0 116-117 28.177496615512318 34.0 29.0 35.0 2.0 35.0 118-119 28.019628793343678 34.0 29.0 35.0 2.0 35.0 120-121 27.846649048390763 34.0 29.0 35.0 2.0 35.0 122-123 27.719559991896993 34.0 29.0 35.0 2.0 35.0 124-125 26.870271290156822 33.5 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 71036.0 3 12177.0 4 7882.0 5 6798.0 6 7210.0 7 8032.0 8 8937.0 9 9254.0 10 9595.0 11 10262.0 12 10187.0 13 10876.0 14 11853.0 15 9895.0 16 7325.0 17 6345.0 18 5860.0 19 5465.0 20 5279.0 21 5450.0 22 6549.0 23 8655.0 24 12425.0 25 17481.0 26 20819.0 27 21960.0 28 25478.0 29 30379.0 30 34626.0 31 41858.0 32 51972.0 33 68346.0 34 96352.0 35 151545.0 36 286677.0 37 407383.0 38 106833.0 39 96.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.73752990253257 17.03103685178229 12.255157569047666 24.97627567663747 2 16.907429463831217 19.06373089259327 38.23371700528311 25.795122638292405 3 19.536941570672347 23.689690682800837 28.45321632188609 28.320151424640727 4 13.577445471703358 14.885074336408932 35.07572645189988 36.46175373998783 5 14.658738126496255 36.78152753108348 33.0898138852421 15.46992045717816 6 34.08766520640374 34.076172587013346 17.031505842081522 14.804656364501401 7 30.22153902805057 30.81553077741003 20.35450445802732 18.60842573651208 8 27.92081740381122 33.41047876297118 19.177394123767137 19.491309709450462 9 27.78355416428043 14.78662275377334 18.750706603429133 38.679116478517095 10-11 26.588441503037703 24.694183249406652 26.55236039344473 22.165014854110915 12-13 26.84119527600746 22.3644243116765 26.75275401993774 24.041626392378298 14-15 24.292885297352065 23.532855148212676 24.02070899902386 28.1535505554114 16-17 24.454776693066727 26.572403690447725 24.5674696658814 24.405349950604148 18-19 24.532566053102002 25.650335494578762 26.21334476879947 23.60375368351977 20-21 25.561854169743704 24.637939547723384 25.910488953873173 23.88971732865974 22-23 25.415180256977653 24.217082037455977 25.758879991200494 24.608857714365868 24-25 24.876638066330077 24.71379320680463 25.796881474589554 24.612687252275734 26-27 24.488740441447483 24.816444587660317 25.96107652063282 24.73373845025938 28-29 24.50967670577389 24.818042340106196 25.995893401451216 24.676387552668704 30-31 24.895226272631973 24.712696768381242 25.79353836904265 24.598538589944134 32-33 24.4968354860597 24.844091609619724 25.788038742895136 24.871034161425435 34-35 24.80416028489821 24.823127961382554 25.92081273095618 24.451899022763065 36-37 24.92842952787896 24.67449570082832 25.709015747666587 24.688059023626135 38-39 24.891714565217526 24.9288860242112 25.639315105825876 24.540084304745402 40-41 24.85196040661109 24.75961620154208 25.854276580934954 24.534146810911878 42-43 24.759557673251802 24.801764659898513 25.68842036181213 24.750257305037554 44-45 24.65436990639005 24.890557679995847 25.652019152097015 24.80305326151709 46-47 24.830773642403834 24.861643199828933 25.551310519319276 24.756272638447957 48-49 24.924500094075587 25.036340363925767 25.230670556565997 24.80848898543265 50-51 24.836785268393268 25.29827567509617 25.10360130590323 24.761337750607336 52-53 25.014715556405616 25.08467045341835 25.28847897846075 24.61213501171528 54-55 24.838683765806458 25.06773644421514 25.37760943645132 24.715970353527084 56-57 24.74826660553741 25.151744423680135 25.185851583804908 24.914137386977554 58-59 24.85180831393436 24.976342777171052 25.261403430181456 24.910445478713132 60-61 24.908332236718138 25.040204075454543 25.422011507354735 24.62945218047259 62-63 24.671029258114366 25.266380262187997 25.349175171166117 24.713415308531523 64-65 24.764492445809243 24.938638129470846 25.432931359661655 24.863938065058257 66-67 24.74547306886051 25.148199884961674 25.31986153388966 24.786465512288157 68-69 24.814692399886326 25.140548354812005 25.28783067475566 24.75692857054601 70-71 24.644539952624893 24.98676901716274 25.46323887662854 24.905452153583827 72-73 24.874843351476812 25.159119685495174 25.235385932228994 24.730651030799024 74-75 24.706903273600815 25.377063725329673 25.188307888881816 24.727725112187695 76-77 24.702911054643362 25.08184425897816 25.290076812203953 24.92516787417453 78-79 24.6480487378438 25.094293345129397 25.324829376153374 24.932828540873423 80-81 24.68359767245259 25.326270836994773 25.12497795415143 24.86515353640121 82-83 24.838576371151113 25.258250009111254 25.08828650972248 24.814887110015153 84-85 24.65877306555708 25.286651627313965 25.09284288241631 24.961732424712636 86-87 24.444965378959786 25.37659395923924 25.235107733066975 24.943332928733998 88-89 24.64835063009637 25.195824067210282 25.161261428218435 24.99456387447492 90-91 24.616695533148686 25.15083869278074 25.219926767258737 25.012539006811828 92-93 24.680235574927355 25.395898811994705 25.095747099171756 24.828118513906187 94-95 24.657908667343243 25.0736747956532 25.215465190473513 25.052951346530044 96-97 24.660746609164715 25.123574740442862 25.192724092233316 25.022954558159118 98-99 24.545063448527614 25.206587195284463 25.110601396735433 25.137747959452483 100-101 24.559138177676427 25.238636728623064 25.228136341961772 24.97408875173874 102-103 24.560338888101395 25.022150205103642 25.381124041457404 25.036386865337562 104-105 24.441350055387094 25.302745204855043 25.24110448071859 25.014800259039276 106-107 24.447476445714894 25.23128102945845 25.241503224778356 25.0797393000483 108-109 24.465475079387335 25.16370066975054 25.20771037721106 25.163113873651067 110-111 24.523882759719683 25.30864083150817 25.24573294940069 24.921743459371452 112-113 24.47116156687379 25.26466627960124 25.26713690998258 24.99703524354239 114-115 24.288211387135426 25.48822744623291 25.249595434275058 24.97396573235661 116-117 24.276893800305675 25.482238080046844 25.180361566224914 25.060506553422567 118-119 24.440848878292734 25.17970779954447 25.216327268472398 25.163116053690395 120-121 24.150502737754483 25.274457252725046 25.3936800453214 25.181359964199075 122-123 24.250464641959276 25.38355162830867 25.28470806708636 25.08127566264569 124-125 24.224658975945808 25.343216638441007 25.285066833673646 25.14705755193954 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 83.0 1 97.0 2 128.5 3 139.5 4 130.0 5 121.0 6 128.0 7 167.5 8 228.5 9 299.0 10 334.0 11 371.0 12 433.5 13 523.0 14 610.5 15 685.0 16 793.0 17 901.0 18 982.5 19 1033.0 20 1121.0 21 1313.5 22 1537.0 23 1808.0 24 2127.5 25 2601.0 26 3531.5 27 4698.0 28 5571.0 29 6673.5 30 8505.0 31 10234.0 32 12240.0 33 14662.0 34 17198.5 35 19906.5 36 23156.5 37 26569.0 38 28627.0 39 30945.5 40 33642.0 41 35853.5 42 38493.0 43 43056.0 44 47772.5 45 51165.0 46 54711.5 47 57743.5 48 61565.0 49 66047.5 50 66853.5 51 66554.5 52 66881.0 53 67365.0 54 68746.0 55 68181.0 56 64400.0 57 59219.0 58 55597.5 59 51945.5 60 46654.5 61 41497.5 62 36216.0 63 28708.0 64 21961.5 65 17737.0 66 13875.0 67 10770.5 68 8796.0 69 7232.5 70 6176.5 71 5047.0 72 4021.5 73 3603.0 74 2954.0 75 2324.0 76 1702.5 77 1061.5 78 653.0 79 418.0 80 258.0 81 126.0 82 79.0 83 52.5 84 37.5 85 30.5 86 21.5 87 11.5 88 13.5 89 14.0 90 9.5 91 9.0 92 12.5 93 12.0 94 7.5 95 9.5 96 9.0 97 9.5 98 12.0 99 9.5 100 18.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034586005513997445 2 0.02519837544591243 3 0.024271964583930352 4 0.03069507989367274 5 0.03254790161763689 6 0.044591242823403855 7 0.0377358024447365 8 0.03483304841052601 9 0.030448036997144188 10-11 0.03560505746217773 12-13 0.03480216804845993 14-15 0.032856705238297576 16-17 0.036747630858622295 18-19 0.04909977568504995 20-21 0.06071079182189196 22-23 0.054287676512149566 24-25 0.06469435852841487 26-27 0.0476483986679447 28-29 0.04823512554720002 30-31 0.04838952735753036 32-33 0.05521408737413164 34-35 0.03761228099647223 36-37 0.05045851161595699 38-39 0.060216706028834846 40-41 0.04635142346116979 42-43 0.05783891814974752 44-45 0.05854916647726711 46-47 0.06503404251114163 48-49 0.047710159392076845 50-51 0.049933545460833825 52-53 0.05969173987371167 54-55 0.04613526092670731 56-57 0.04468388390960207 58-59 0.044745644633734205 60-61 0.033041987410693995 62-63 0.042923703271836124 64-65 0.041966412047787977 66-67 0.03464776623812959 68-69 0.030386276273012044 70-71 0.048883613150587465 72-73 0.029676027945492456 74-75 0.040700317203079144 76-77 0.032671423065901165 78-79 0.03291846596242972 80-81 0.02263530539442869 82-83 0.016984199136338033 84-85 0.017787088550055834 86-87 0.01645923298121486 88-89 0.021739774894512683 90-91 0.012599187722956215 92-93 0.018775260136170042 94-95 0.01315503424014546 96-97 0.011888939395436624 98-99 0.010036117671472474 100-101 0.010128758757670681 102-103 0.005712866982222793 104-105 0.005712866982222793 106-107 0.007781851240649426 108-109 0.011796298309238416 110-111 0.007287765447592321 112-113 0.008152415585442257 114-115 0.008152415585442257 116-117 0.006948081464865558 118-119 0.24031097759815012 120-121 0.3573475498285522 122-123 0.026711513187149816 124-125 0.0035821219996640214 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1619152.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.97192100516148 #Duplication Level Percentage of deduplicated Percentage of total 1 80.46862228367155 47.45389236706855 2 10.099571386261527 11.91182251953208 3 3.41384017597286 6.039621395451541 4 1.7231262104709975 4.064642510632756 5 1.0065860278015661 2.9680155858206616 6 0.6785039543870759 2.400760895988259 7 0.47222189749473503 1.949348270517688 8 0.35459973578752313 1.6729142085850357 9 0.25209170002082887 1.3379698637716664 >10 1.4380465744887068 14.908692705295392 >50 0.06962022335112511 2.751785567850843 >100 0.022432683504468014 2.1613431172264175 >500 4.212267355024206E-4 0.13979019383805147 >1k 3.159200516268154E-4 0.23940079842100775 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 6.17607241321383E-5 6 0.0 0.0 0.0 0.0 6.17607241321383E-5 7 0.0 0.0 0.0 0.0 6.17607241321383E-5 8 0.0 0.0 0.0 0.0 6.17607241321383E-5 9 0.0 0.0 0.0 6.17607241321383E-5 1.235214482642766E-4 10-11 0.0 0.0 0.0 6.17607241321383E-5 1.235214482642766E-4 12-13 0.0 0.0 0.0 6.17607241321383E-5 7.102483275195906E-4 14-15 0.0 0.0 0.0 6.17607241321383E-5 8.337697757838671E-4 16-17 0.0 0.0 0.0 6.17607241321383E-5 9.881715861142129E-4 18-19 0.0 0.0 0.0 6.17607241321383E-5 9.881715861142129E-4 20-21 0.0 0.0 0.0 6.17607241321383E-5 9.881715861142129E-4 22-23 0.0 0.0 0.0 6.17607241321383E-5 0.001019051948180282 24-25 0.0 0.0 0.0 1.235214482642766E-4 0.0010499323102463511 26-27 0.0 0.0 0.0 1.5440181033034577E-4 0.0012352144826427661 28-29 0.0 0.0 0.0 7.102483275195906E-4 0.0012352144826427661 30-31 0.0 0.0 0.0 0.0030880362066069153 0.0012660948447088352 32-33 0.0 0.0 0.0 0.009233228257754677 0.0012969752067749044 34-35 0.0 0.0 0.0 0.01673715623980948 0.001420496655039181 36-37 0.0 0.0 0.0 0.02698943644574444 0.001420496655039181 38-39 0.0 0.0 0.0 0.044467721375139574 0.0014513770171052502 40-41 0.0 0.0 0.0 0.06515756395940592 0.0014822573791713194 42-43 0.0 0.0 0.0 0.08421074735417058 0.0014822573791713194 44-45 0.0 0.0 0.0 0.10582700080041899 0.0014822573791713194 46-47 0.0 0.0 0.0 0.13019160647054756 0.0014822573791713194 48-49 0.0 0.0 0.0 0.15671783748530094 0.0015440181033034577 50-51 0.0 3.088036206606915E-5 0.0 0.1854056938446792 0.0015440181033034577 52-53 0.0 6.17607241321383E-5 0.0 0.214340593100586 0.0017293002756998727 54-55 0.0 6.17607241321383E-5 0.0 0.24673409290789253 0.0018528217239641492 56-57 0.0 6.17607241321383E-5 0.0 0.28487134005948794 0.0018528217239641492 58-59 0.0 6.17607241321383E-5 0.0 0.3272391968141348 0.0018837020860302182 60-61 0.0 6.17607241321383E-5 0.0 0.37352885955117243 0.0019763431722284257 62-63 0.0 6.17607241321383E-5 0.0 0.42009644554680475 0.0019763431722284257 64-65 0.0 6.17607241321383E-5 0.0 0.4728092235935848 0.0020998646204927023 66-67 0.0 6.17607241321383E-5 0.0 0.531389270432918 0.0020998646204927023 68-69 0.0 6.17607241321383E-5 0.0 0.5982143739438917 0.0020998646204927023 70-71 0.0 6.17607241321383E-5 0.0 0.6729448501437789 0.002223386068756979 72-73 0.0 6.17607241321383E-5 0.0 0.7498369516882911 0.0025321896894176703 74-75 0.0 6.17607241321383E-5 0.0 0.8312993468185816 0.002593950413549809 76-77 0.0 6.17607241321383E-5 0.0 0.9194936608792751 0.002593950413549809 78-79 0.0 6.17607241321383E-5 0.0 1.0212135735249068 0.002593950413549809 80-81 0.0 6.17607241321383E-5 0.0 1.1326916805834164 0.0026557111376819473 82-83 0.0 6.17607241321383E-5 0.0 1.2567689753648823 0.0027174718618140853 84-85 0.0 6.17607241321383E-5 0.0 1.3831314169392375 0.002779232585946224 86-87 0.0 6.17607241321383E-5 0.0 1.5201167030643201 0.002995395120408708 88-89 0.0 6.17607241321383E-5 0.0 1.6697938179985572 0.0030880362066069153 90-91 0.0 6.17607241321383E-5 0.0 1.835405199758886 0.0030880362066069153 92-93 0.0 6.17607241321383E-5 0.0 2.0145730604662195 0.0033350791031354684 94-95 0.0 6.17607241321383E-5 0.0 2.2053210569483284 0.003458600551399745 96-97 0.0 6.17607241321383E-5 0.0 2.40783447137761 0.003613002361730091 98-99 0.0 6.17607241321383E-5 0.0 2.629678992460251 0.003798284534126506 100-101 0.0 6.17607241321383E-5 0.0 2.8774630176783895 0.003829164896192575 102-103 0.0 6.17607241321383E-5 0.0 3.1502601361700444 0.003860045258258644 104-105 0.0 6.17607241321383E-5 0.0 3.4292950877990456 0.003890925620324713 106-107 0.0 6.17607241321383E-5 0.0 3.721083628961333 0.003921805982390782 108-109 0.0 9.264108619820745E-5 0.0 4.033469371621688 0.004076207792721128 110-111 0.0 1.235214482642766E-4 0.0 4.376642835261915 0.004076207792721128 112-113 0.0 1.235214482642766E-4 0.0 4.751468670019863 0.004076207792721128 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1800 0.0 69.7603 1 GTATCAA 3735 0.0 59.43149 1 TCAACGC 4500 0.0 48.121555 4 CAACGCA 4670 0.0 46.36981 5 AACGCAG 4960 0.0 43.65867 6 ATCAACG 4955 0.0 43.581314 3 TATCAAC 5275 0.0 41.726948 2 ACGCAGA 5785 0.0 37.328506 7 CGCAGAG 6245 0.0 34.674187 8 GTACATG 8235 0.0 34.54321 1 TACATGG 8495 0.0 33.123417 2 ACATGGG 8510 0.0 32.6456 3 GCAGAGT 6725 0.0 31.313736 9 CATGGGG 7130 0.0 30.204372 4 ATGGGGG 3870 0.0 27.20903 5 CAGAGTA 6365 0.0 26.449575 10-11 AGAGTAC 6010 0.0 26.032263 10-11 ATGGGGA 2880 0.0 22.72223 5 TATACCG 220 4.1846943E-6 21.633066 5 GTGGTAT 875 0.0 20.403826 1 >>END_MODULE