##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921477_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3611192 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.91094962549762 31.0 31.0 34.0 26.0 34.0 2 29.998511017968582 31.0 31.0 34.0 26.0 34.0 3 30.127847259298314 31.0 31.0 34.0 26.0 34.0 4 33.62388679416658 37.0 35.0 37.0 28.0 37.0 5 33.582138529327715 37.0 35.0 37.0 28.0 37.0 6 33.68248572770432 37.0 35.0 37.0 29.0 37.0 7 33.551129100861985 37.0 35.0 37.0 28.0 37.0 8 33.52415656658522 37.0 35.0 37.0 28.0 37.0 9 34.91580536288295 39.0 35.0 39.0 28.0 39.0 10-11 34.77092660816706 38.5 35.0 39.0 27.0 39.0 12-13 34.58680222486093 38.0 35.0 39.0 27.0 39.0 14-15 35.512382753395556 39.0 36.0 41.0 27.0 41.0 16-17 35.340383175416875 39.0 36.0 40.5 26.5 41.0 18-19 35.12958712801756 39.0 35.0 40.0 25.5 41.0 20-21 34.99401374947662 39.0 35.0 40.0 25.0 41.0 22-23 35.01968795898972 39.0 35.0 40.0 24.5 41.0 24-25 34.85707170928602 39.0 35.0 40.0 24.0 41.0 26-27 34.5472182038507 39.0 34.0 40.0 22.5 41.0 28-29 34.272679076604064 38.0 34.0 40.0 19.5 41.0 30-31 33.98845976619354 38.0 33.5 40.0 18.0 41.0 32-33 33.676775978679615 38.0 33.0 40.0 16.5 41.0 34-35 33.22343979494859 38.0 32.5 40.0 12.0 41.0 36-37 32.79972084009934 38.0 32.0 40.0 9.0 41.0 38-39 32.528936567205506 38.0 31.0 40.0 8.5 41.0 40-41 32.2254845491461 37.0 31.0 40.0 8.0 41.0 42-43 31.896281338682627 37.0 30.5 40.0 6.5 41.0 44-45 31.54401607557837 37.0 30.0 39.5 2.0 40.5 46-47 31.217184796599017 36.0 30.0 39.0 2.0 40.0 48-49 30.96461030042158 36.0 29.0 39.0 2.0 40.0 50-51 30.26378353740261 35.0 28.5 38.5 2.0 39.5 52-53 30.849457464460485 36.0 30.0 38.5 2.0 40.0 54-55 31.251280463625307 36.0 30.0 39.0 2.0 40.0 56-57 31.072269073480445 36.0 30.0 39.0 2.0 41.0 58-59 30.711480724370233 36.0 29.5 39.0 2.0 40.0 60-61 30.222691565555085 35.0 29.0 39.0 2.0 40.0 62-63 29.69856213682352 35.0 28.0 38.5 2.0 40.0 64-65 29.113280185600765 34.5 27.5 38.0 2.0 40.0 66-67 28.593230850090496 34.0 26.0 37.0 2.0 39.5 68-69 28.04833487114504 34.0 26.0 36.5 2.0 39.0 70-71 27.489072029401925 33.5 25.0 36.0 2.0 39.0 72-73 26.901556605132043 33.0 23.5 35.5 2.0 38.5 74-75 26.26916541684851 32.5 21.5 35.0 2.0 37.5 76-77 25.6473019158217 32.0 19.5 35.0 2.0 37.0 78-79 25.045738913909865 31.5 18.0 35.0 2.0 36.0 80-81 24.42124248724521 31.0 10.5 34.0 2.0 36.0 82-83 23.74435158806289 31.0 6.0 34.0 2.0 35.0 84-85 23.073606581981792 30.0 2.0 34.0 2.0 35.0 86-87 22.39472700426895 29.5 2.0 34.0 2.0 35.0 88-89 21.679570208396562 29.0 2.0 34.0 2.0 35.0 90-91 20.87475423627434 29.0 2.0 34.0 2.0 35.0 92-93 19.998200594152845 27.0 2.0 33.0 2.0 34.5 94-95 19.02858017518869 25.5 2.0 33.0 2.0 34.0 96-97 18.098928276314304 24.5 2.0 32.0 2.0 34.0 98 17.468459168053098 23.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 143908.0 3 24263.0 4 18548.0 5 15699.0 6 15150.0 7 15876.0 8 18153.0 9 20769.0 10 23112.0 11 25320.0 12 27390.0 13 29221.0 14 25978.0 15 26256.0 16 29085.0 17 32519.0 18 36254.0 19 36631.0 20 38758.0 21 41966.0 22 45500.0 23 50651.0 24 55769.0 25 62213.0 26 70291.0 27 78341.0 28 89903.0 29 103337.0 30 121054.0 31 144668.0 32 175900.0 33 221021.0 34 286732.0 35 379839.0 36 473344.0 37 439503.0 38 162381.0 39 5889.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.085527101088005 16.908536906021606 13.202645403862597 24.80329058902779 2 16.39106947631362 18.493677851062262 38.5135206271226 26.60173204550152 3 20.73293592760913 21.845465069433324 26.9128867958928 30.508712207064747 4 14.22346424129379 14.315645921494013 33.83034414771013 37.630545689502064 5 16.286483203206398 35.16771854452912 32.027020736070654 16.51877751619382 6 36.13832605466759 32.190361125274336 16.243155467866725 15.42815735219136 7 32.115081572630785 29.616234072780383 18.726631397206962 19.542052957381877 8 28.417725691184188 33.087210883675425 18.493833643825415 20.00122978131497 9 27.08615364504286 16.645525868582155 18.695897097303803 37.57242338907118 10-11 27.18689159151869 24.591075413120567 25.40139813385509 22.82063486150565 12-13 27.23612085242265 21.606583641843457 26.261771216230343 24.89552428950355 14-15 24.236781341146628 23.245920273018562 23.757885468801973 28.759412917032833 16-17 24.84482612022787 26.3629281008534 24.281959892284636 24.510285886634094 18-19 24.83275125825334 25.560154615987692 25.76163308530548 23.845461040453493 20-21 25.33822193323367 24.773682602981275 25.697397384579652 24.190698079205408 22-23 25.074987813310873 24.420281589097137 25.642983855911407 24.861746741680584 24-25 24.785631980366432 24.718221960618692 25.70741030795502 24.788735751059853 26-27 24.84642265394736 24.890852266963492 25.703722941035277 24.559002138053867 28-29 24.804389111977844 25.021702206917656 25.61180544622842 24.562103234876083 30-31 24.931455645186986 24.914622620205115 25.526541177735407 24.627380556872488 32-33 24.80296294859924 24.90825621361153 25.448725628771296 24.840055209017933 34-35 24.965773591893317 24.917520195249008 25.54810909521614 24.56859711764153 36-37 24.975298986418938 24.897409455510378 25.48446521870168 24.642826339369005 38-39 24.983556614752963 24.933812153942117 25.43366599825449 24.648965233050433 40-41 25.057595600899248 24.90043313674332 25.461642109625483 24.58032915273195 42-43 25.051172502181174 24.801083995296153 25.380335976729683 24.767407525792986 44-45 24.93307454004058 24.899723166899403 25.398782758397974 24.76841953466204 46-47 25.02676124929348 24.90863735239906 25.3466157649681 24.71798563333936 48-49 25.09501300866525 24.955066351499074 25.176286723646406 24.773633916189265 50-51 24.857628225069544 25.172387635386283 25.19763631188379 24.772347827660386 52-53 25.030228735408016 25.074109157774497 25.16092274259605 24.734739364221436 54-55 24.91638814616756 24.94149676916221 25.330394942067734 24.811720142602496 56-57 24.878001452415035 25.071907350564743 25.30694691196157 24.74314428505865 58-59 24.951113373691445 25.016648103827944 25.275975808513333 24.756262713967274 60-61 25.01151426383803 24.91191188000613 25.2940921839827 24.782481672173144 62-63 24.846182318863054 25.09409191712255 25.278538105956194 24.781187658058204 64-65 24.91255662134546 24.922873561650054 25.30189929162579 24.8626705253787 66-67 24.942165824587704 24.982790059053457 25.244305957167267 24.830738159191572 68-69 24.91986202403722 24.966577856472703 25.27723257413146 24.836327545358625 70-71 24.820470539359857 24.839753912987465 25.35897196523038 24.9808035824223 72-73 25.017680378813594 24.906548556357425 25.166593404147587 24.909177660681397 74-75 24.83236616378486 25.109659294389257 25.179267686338047 24.878706855487835 76-77 24.983770630286543 24.87635842293508 25.166073711036123 24.973797235742254 78-79 24.937242195054374 24.804925041143083 25.309699752863324 24.94813301093922 80-81 24.881964235295424 24.99049343720314 25.198497309371508 24.929045018129926 82-83 25.016679724799847 24.900269435287676 25.14011525286407 24.94293558704841 84-85 24.962462603407758 24.935358635283915 25.11074870505195 24.991430056256377 86-87 24.937675663121766 24.848128322910018 25.266437757019222 24.947758256948994 88-89 24.8838371993059 24.728577871295983 25.254116994393083 25.133467935005033 90-91 24.959641206957052 24.775590924080408 25.166139699352545 25.098628169609995 92-93 25.006661804522906 24.8563609246084 25.22385888434384 24.91311838652485 94-95 25.050164032840506 24.734588938681235 25.178074318713602 25.03717270976466 96-97 25.075161658763847 24.716029684126315 25.211242648650124 24.99756600845972 98 25.008455935120725 24.76331726334786 25.054490713491777 25.17373608803964 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 503.0 1 382.0 2 417.5 3 565.5 4 465.0 5 430.5 6 746.5 7 1473.5 8 2081.5 9 2015.0 10 1616.5 11 1418.5 12 1503.0 13 1724.5 14 2006.5 15 2329.5 16 2557.0 17 2647.0 18 2641.5 19 2609.0 20 2515.0 21 2292.0 22 2219.0 23 2308.5 24 2398.5 25 2707.5 26 3342.0 27 4257.0 28 5637.5 29 7614.0 30 10691.0 31 14834.5 32 19817.0 33 25575.0 34 32136.0 35 39478.5 36 47432.5 37 56416.0 38 65446.5 39 74327.5 40 83918.5 41 93730.0 42 104695.0 43 116040.5 44 125994.0 45 136911.5 46 147939.0 47 157358.0 48 163212.0 49 164114.5 50 163760.0 51 164715.0 52 166577.0 53 167541.0 54 165876.0 55 159957.0 56 150741.0 57 140629.0 58 129510.5 59 116425.0 60 102325.5 61 86781.0 62 70929.5 63 55942.5 64 42505.0 65 32576.5 66 25294.5 67 19721.0 68 15359.0 69 12179.5 70 9494.0 71 7312.0 72 5887.5 73 4628.5 74 3751.0 75 3035.5 76 2210.0 77 1437.5 78 926.5 79 613.5 80 387.5 81 248.5 82 145.0 83 95.0 84 59.5 85 37.0 86 26.5 87 14.5 88 9.0 89 11.5 90 8.5 91 5.5 92 6.0 93 4.0 94 5.0 95 3.5 96 0.5 97 2.0 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.47588164794339377 2 0.050343487690491115 3 0.05865099391004411 4 0.055798750107997584 5 0.06668158325561199 6 0.06845385124911663 7 0.04563590083274442 8 0.021987199794416913 9 0.013292009951284782 10-11 0.016435016471015664 12-13 0.011755121300667479 14-15 0.01647655400211343 16-17 0.01564580338015813 18-19 0.0587479148159389 20-21 0.08877954979962295 22-23 0.10446689071087883 24-25 0.07415833885320969 26-27 0.08966568379637527 28-29 0.09038566766873653 30-31 0.061337087587699575 32-33 0.035293055589400955 34-35 0.40302481839791404 36-37 0.6307197180321623 38-39 0.5771639946034439 40-41 0.5715564279052456 42-43 0.5445154951606007 44-45 0.5299081300578867 46-47 0.5199806601255209 48-49 0.5093747438518915 50-51 0.5240513381731019 52-53 0.6062264205281801 54-55 0.5757655643898192 56-57 0.5328849864532266 58-59 0.510648561472223 60-61 0.5236082711747257 62-63 0.5360695305040551 64-65 0.5541383565315829 66-67 0.5807085305904532 68-69 0.533397282670099 70-71 0.4824584237005399 72-73 0.4655526485437495 74-75 0.445268487524341 76-77 0.46047122390612294 78-79 0.4546975070835337 80-81 0.451568346407502 82-83 0.4709802192738575 84-85 0.43690559792999095 86-87 0.4399378377001278 88-89 0.4675187583490437 90-91 0.45000376606948617 92-93 0.4450054164940552 94-95 0.4564974667644368 96-97 0.45065452072335116 98 0.44539310011763433 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3611192.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.28351506025125 #Duplication Level Percentage of deduplicated Percentage of total 1 76.99750215928145 45.64682578861489 2 12.880595762118876 15.272139856971656 3 4.324665102759958 7.691440462500389 4 1.9092655477032303 4.527518914051331 5 1.045648255940666 3.0994852064391956 6 0.6533742026064666 2.3240591628120066 7 0.42588050503105934 1.7673385333713347 8 0.29733145589688115 1.4101483074839347 9 0.21296809884001947 1.1362947745441834 >10 1.1677096769026312 12.17366650786624 >50 0.0638130284985085 2.5606350465286676 >100 0.020776700129860708 2.009930677336078 >500 3.286530046769791E-4 0.14108986010984717 >1k 1.4085128563293755E-4 0.23942690137026593 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4167 0.11539126138959102 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.538337479701993E-5 2 0.0 0.0 0.0 0.0 5.538337479701993E-5 3 0.0 0.0 0.0 0.0 5.538337479701993E-5 4 0.0 0.0 0.0 0.0 5.538337479701993E-5 5 0.0 2.7691687398509966E-5 0.0 0.0 1.1076674959403986E-4 6 0.0 2.7691687398509966E-5 0.0 0.0 1.1076674959403986E-4 7 0.0 2.7691687398509966E-5 0.0 0.0 1.1076674959403986E-4 8 0.0 2.7691687398509966E-5 0.0 0.0 1.1076674959403986E-4 9 0.0 2.7691687398509966E-5 0.0 0.0 1.1076674959403986E-4 10-11 0.0 2.7691687398509966E-5 0.0 0.0 1.1076674959403986E-4 12-13 0.0 2.7691687398509966E-5 0.0 1.3845843699254983E-5 2.7691687398509967E-4 14-15 0.0 2.7691687398509966E-5 0.0 4.153753109776495E-5 3.046085613836096E-4 16-17 0.0 2.7691687398509966E-5 0.0 5.538337479701993E-5 3.323002487821196E-4 18-19 0.0 2.7691687398509966E-5 0.0 5.538337479701993E-5 4.153753109776495E-4 20-21 0.0 2.7691687398509966E-5 0.0 5.538337479701993E-5 5.122962168724344E-4 22-23 0.0 2.7691687398509966E-5 0.0 5.538337479701993E-5 5.676795916694543E-4 24-25 0.0 2.7691687398509966E-5 0.0 1.3845843699254983E-4 6.369088101657293E-4 26-27 2.7691687398509966E-5 2.7691687398509966E-5 0.0 2.6307103028584466E-4 7.061380286620041E-4 28-29 2.7691687398509966E-5 2.7691687398509966E-5 0.0 7.199838723612592E-4 7.199838723612591E-4 30-31 2.7691687398509966E-5 2.7691687398509966E-5 0.0 0.0025199435532644067 7.476755597597691E-4 32-33 2.7691687398509966E-5 2.7691687398509966E-5 0.0 0.006064479540273683 8.30750621955299E-4 34-35 2.7691687398509966E-5 2.7691687398509966E-5 0.0 0.01067514549212559 8.584423093538089E-4 36-37 2.7691687398509966E-5 2.7691687398509966E-5 0.0 0.017445763061061277 8.584423093538089E-4 38-39 2.7691687398509966E-5 2.7691687398509966E-5 0.0 0.029159346830630994 8.999798404515739E-4 40-41 2.7691687398509966E-5 2.7691687398509966E-5 0.0 0.04243751093821652 9.138256841508288E-4 42-43 2.7691687398509966E-5 2.7691687398509966E-5 1.3845843699254983E-5 0.055369528953320674 9.276715278500839E-4 44-45 2.7691687398509966E-5 2.7691687398509966E-5 2.7691687398509966E-5 0.06783078828265016 0.0010245924337448687 46-47 2.7691687398509966E-5 2.7691687398509966E-5 2.7691687398509966E-5 0.0816904778256044 0.0011215133396396536 48-49 2.7691687398509966E-5 2.7691687398509966E-5 2.7691687398509966E-5 0.09575785502404746 0.0012184342455344385 50-51 2.7691687398509966E-5 2.7691687398509966E-5 2.7691687398509966E-5 0.10946524028630988 0.0012184342455344385 52-53 2.7691687398509966E-5 2.7691687398509966E-5 2.7691687398509966E-5 0.12394799279573061 0.0013568926825269882 54-55 2.7691687398509966E-5 2.7691687398509966E-5 2.7691687398509966E-5 0.13866612464803865 0.0014122760573240082 56-57 2.7691687398509966E-5 2.7691687398509966E-5 2.7691687398509966E-5 0.15391039856091837 0.0014122760573240082 58-59 2.7691687398509966E-5 4.153753109776495E-5 2.7691687398509966E-5 0.16979158128396385 0.0014122760573240082 60-61 2.7691687398509966E-5 5.538337479701993E-5 2.7691687398509966E-5 0.18563122647591157 0.0014676594321210283 62-63 2.7691687398509966E-5 5.538337479701993E-5 2.7691687398509966E-5 0.20109703388797937 0.001606117869113578 64-65 2.7691687398509966E-5 5.538337479701993E-5 2.7691687398509966E-5 0.21721359595391215 0.001689192931309108 66-67 2.7691687398509966E-5 5.538337479701993E-5 2.7691687398509966E-5 0.23443782551578538 0.001730730462406873 68-69 2.7691687398509966E-5 5.538337479701993E-5 2.7691687398509966E-5 0.2522712722004258 0.001744576306106128 70-71 2.7691687398509966E-5 5.538337479701993E-5 2.7691687398509966E-5 0.2711570030062096 0.0017584221498053829 72-73 2.7691687398509966E-5 8.30750621955299E-5 2.7691687398509966E-5 0.2896550501884142 0.0019938014926927177 74-75 2.7691687398509966E-5 1.2461259329329486E-4 2.7691687398509966E-5 0.3078761804966338 0.0020630307111889927 76-77 2.7691687398509966E-5 1.3845843699254983E-4 2.7691687398509966E-5 0.3284511042337267 0.0020768765548882474 78-79 2.7691687398509966E-5 1.3845843699254983E-4 2.7691687398509966E-5 0.34840296500435314 0.0021737974607830323 80-81 2.7691687398509966E-5 1.3845843699254983E-4 2.7691687398509966E-5 0.3678979129329042 0.002229180835580052 82-83 2.7691687398509966E-5 1.3845843699254983E-4 2.7691687398509966E-5 0.3874067067051544 0.002298410054076327 84-85 2.7691687398509966E-5 1.3845843699254983E-4 2.7691687398509966E-5 0.4078985553800518 0.002312255897775582 86 2.7691687398509966E-5 1.3845843699254983E-4 2.7691687398509966E-5 0.4246797179435488 0.002326101741474837 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6600 0.0 38.285515 1 GGTATCA 4070 0.0 29.967987 1 TCAACGC 8485 0.0 29.124224 4 TATCAAC 8770 0.0 28.59639 2 CAACGCA 8800 0.0 28.133812 5 ATCAACG 8925 0.0 27.842905 3 AACGCAG 9430 0.0 26.442123 6 GTACATG 12225 0.0 26.015686 1 TACATGG 12460 0.0 24.837574 2 GTACCTG 3725 0.0 23.970747 1 ACATGGG 12720 0.0 23.681091 3 ACGCAGA 11010 0.0 22.308598 7 TACCTGG 4050 0.0 21.056265 2 CGCAGAG 11730 0.0 20.895864 8 CATGGGG 10195 0.0 20.19187 4 GAGTACA 9180 0.0 20.055035 1 AGTACAT 9060 0.0 19.12877 2 GCAGAGT 13100 0.0 18.466015 9 GTATAGG 715 0.0 18.024286 1 GTGTAGG 1240 0.0 17.816633 1 >>END_MODULE