##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921477_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3611192 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.94350951154079 33.0 31.0 34.0 30.0 34.0 2 32.05622381750956 34.0 31.0 34.0 30.0 34.0 3 32.18390188059787 34.0 31.0 34.0 30.0 34.0 4 35.725939523570055 37.0 35.0 37.0 35.0 37.0 5 35.52781076165432 37.0 35.0 37.0 33.0 37.0 6 35.56552711680797 37.0 35.0 37.0 33.0 37.0 7 35.49616663971342 37.0 35.0 37.0 33.0 37.0 8 35.44843641656273 37.0 35.0 37.0 33.0 37.0 9 37.07282110726874 39.0 37.0 39.0 34.0 39.0 10-11 36.98807499019715 39.0 37.0 39.0 33.0 39.0 12-13 36.8654433217619 39.0 37.0 39.0 33.0 39.0 14-15 38.15851663384279 40.0 38.0 41.0 33.0 41.0 16-17 38.05934508605469 40.0 38.0 41.0 33.0 41.0 18-19 37.95133795156835 40.0 38.0 41.0 33.0 41.0 20-21 37.83331168766435 40.0 38.0 41.0 33.0 41.0 22-23 37.795511426697885 40.0 38.0 41.0 33.0 41.0 24-25 37.84483364495712 40.0 38.0 41.0 33.0 41.0 26-27 37.73261903548745 40.0 38.0 41.0 33.0 41.0 28-29 37.59281685936389 40.0 38.0 41.0 32.0 41.0 30-31 37.44974152578982 40.0 37.5 41.0 32.0 41.0 32-33 37.281906500679 40.0 37.0 41.0 31.5 41.0 34-35 37.12917992175437 40.0 37.0 41.0 31.0 41.0 36-37 37.02566119442001 40.0 37.0 41.0 31.0 41.0 38-39 36.9918420288924 40.0 37.0 41.0 31.0 41.0 40-41 36.8192060959373 40.0 36.5 41.0 30.5 41.0 42-43 36.569660654985945 39.0 36.0 41.0 30.0 41.0 44-45 36.3581012862235 39.0 35.5 41.0 30.0 41.0 46-47 36.07572748831964 39.0 35.0 40.0 29.5 41.0 48-49 35.735536770130196 39.0 35.0 40.0 28.5 41.0 50-51 35.446404677458304 38.5 35.0 40.0 28.0 41.0 52-53 35.127546112197855 38.0 34.0 40.0 27.0 41.0 54-55 34.786537658479524 38.0 34.0 40.0 26.0 41.0 56-57 34.38942792296837 37.5 34.0 40.0 26.0 41.0 58-59 33.98817869556645 37.0 33.0 40.0 25.0 41.0 60-61 33.54817910540342 36.5 33.0 39.0 23.5 40.5 62-63 33.09622210616328 36.0 32.0 39.0 22.5 40.0 64-65 32.56932503173468 35.0 31.5 38.5 21.5 40.0 66-67 32.03463163963589 35.0 31.0 38.0 20.0 40.0 68-69 31.519731573397372 35.0 31.0 37.0 18.0 39.5 70-71 30.952374728344545 34.0 30.0 36.5 16.5 39.0 72-73 30.395660767968028 34.0 29.5 36.0 12.5 39.0 74-75 29.869683749853234 34.0 29.0 35.5 8.0 38.0 76-77 28.613481227251278 32.5 27.5 34.5 7.5 36.0 78-79 29.553392204014628 34.0 29.0 35.0 7.0 37.0 80-81 29.58062684011263 34.0 29.0 35.0 7.0 36.0 82-83 29.23808994370834 34.0 29.0 35.0 2.0 36.0 84-85 28.734392688065327 34.0 29.0 35.0 2.0 35.5 86-87 28.197048232273445 33.0 27.5 35.0 2.0 35.0 88-89 27.639650979510364 33.0 26.5 35.0 2.0 35.0 90-91 27.141270250930994 33.0 25.5 34.5 2.0 35.0 92-93 26.677363180910902 32.0 25.0 34.0 2.0 35.0 94-95 26.148256863661636 32.0 24.5 34.0 2.0 35.0 96-97 25.348034527103515 32.0 21.5 34.0 2.0 35.0 98-99 24.2967151843491 31.5 10.0 34.0 2.0 35.0 100-101 20.711297266941223 27.0 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 22099.0 3 11940.0 4 7294.0 5 5528.0 6 4786.0 7 4911.0 8 5924.0 9 7107.0 10 8488.0 11 9904.0 12 11562.0 13 13822.0 14 15594.0 15 17471.0 16 20191.0 17 23218.0 18 23624.0 19 21508.0 20 21538.0 21 23022.0 22 24921.0 23 27405.0 24 31283.0 25 36177.0 26 43188.0 27 52088.0 28 63271.0 29 76932.0 30 94911.0 31 117715.0 32 151046.0 33 201174.0 34 284113.0 35 424637.0 36 639287.0 37 750639.0 38 304252.0 39 8622.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.335433517517295 17.349673305196923 13.61939951270097 24.695493664584816 2 16.45631137862512 18.825916761003015 38.12489061783478 26.592881242537093 3 20.681573472819476 21.983329677803848 27.191711474596286 30.14338537478039 4 14.408759403194168 14.658522981213979 33.79056822460878 37.14214939098308 5 16.285151666785282 35.14312385476963 32.12731707951959 16.444407398925502 6 36.10678993427809 32.38961417540585 16.061467916855324 15.442127973460739 7 32.131610751293 29.622284748143183 18.76936941780411 19.476735082759706 8 28.38266244120315 33.21187713038098 18.480091679843518 19.925368748572353 9 26.89578461375567 16.679107280406075 18.7517514102057 37.673356695632556 10-11 27.119625039257063 24.666949031095477 25.47688496966569 22.73654095998177 12-13 27.206860469145212 21.62070614323828 26.328859013894185 24.843574373722323 14-15 24.149616036971732 23.324468917879045 23.84443241832282 28.681482626826398 16-17 24.670320043269868 26.452916664646757 24.44331945253369 24.433443839549685 18-19 24.68249441309288 25.605750379732388 25.964442698569634 23.7473125086051 20-21 25.173458018222146 24.781758741111044 25.911290819608784 24.133492421058026 22-23 24.934124672978157 24.436487707497065 25.875002891546973 24.754384727977804 24-25 24.639172002135204 24.729200675575168 25.898617741299702 24.733009580989933 26-27 24.663617450027843 24.94725359309147 25.902110701049775 24.48701825583091 28-29 24.689346479860237 25.019302238782714 25.83678927079431 24.45456201056274 30-31 24.843755646666846 24.899445195294884 25.699660531908574 24.557138626129696 32-33 24.601038935431806 24.901675545083858 25.662433494950438 24.834852024533895 34-35 24.80477209610436 24.939890465223705 25.809920939553155 24.44541649911878 36-37 24.734598178214597 24.9685907424632 25.741896148455805 24.5549149308664 38-39 24.825870281616748 24.955087085977574 25.66876377974455 24.55027885266113 40-41 24.8725601407146 24.935572051904643 25.651082690046344 24.54078511733441 42-43 24.87310867646295 24.860840819011027 25.60225695345899 24.663793551067034 44-45 24.770817650613655 24.87765401469315 25.621645005818877 24.729883328874315 46-47 24.778856290380745 24.95863249870787 25.60829754243527 24.654213668476107 48-49 24.86340015978533 25.019973166034127 25.423064195209488 24.69356247897106 50-51 24.766011879796302 25.176655093901957 25.37764262602846 24.679690400273284 52-53 24.928145064031824 25.109752028124433 25.32031142908176 24.64179147876198 54-55 24.879757698747344 24.918167664624228 25.419006480677876 24.783068155950556 56-57 24.806639480784824 25.141983716440482 25.367761952808664 24.68361484996603 58-59 24.891609968407558 25.022745533727015 25.365780443534792 24.719864054330635 60-61 24.938825776142775 24.986610349825728 25.38140425444711 24.693159619584392 62-63 24.74795586085798 25.127792883646954 25.41594224272651 24.708309012768556 64-65 24.85576786605676 24.949843288402647 25.411303035988624 24.783085809551963 66-67 24.86082231186772 25.04810550466594 25.300794454168045 24.79027772929829 68-69 24.838800535500457 25.10746515513262 25.334926774621113 24.71880753474581 70-71 24.777767469040324 24.956968714212717 25.4176215711716 24.84764224557536 72-73 24.99503465492306 25.002056774738985 25.222207848652406 24.78070072168555 74-75 24.7730789162978 25.21779894133278 25.19495548990199 24.81416665246743 76-77 24.895933341786527 24.951846645889212 25.294131616806936 24.858088395517324 78-79 24.823102856334454 24.94302725200487 25.41245747741424 24.821412414246435 80-81 24.788683663388074 25.11111360423321 25.328306091126663 24.771896641252056 82-83 24.918386298620764 25.094514836305166 25.225492864211223 24.761606000862844 84-85 24.85033468611103 25.130173405281443 25.19654975906893 24.822942149538598 86-87 24.822037997110797 25.076080307090937 25.335612126770524 24.76626956902774 88-89 24.74169174386556 24.95095800490775 25.334984004368504 24.972366246858186 90-91 24.819531210248304 25.063211041901813 25.266462426291913 24.85079532155797 92-93 24.892767239664458 25.17101000211113 25.28652660054003 24.64969615768438 94-95 24.85244970938585 25.042333775283776 25.248003434058802 24.85721308127157 96-97 24.805433758859436 25.036811326340402 25.29495447359042 24.862800441209743 98-99 24.807808386238502 25.048310138697005 25.258652240254158 24.88522923481033 100-101 25.320225761515857 24.50969151649593 25.354164762703927 24.815917959284274 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 191.0 1 163.0 2 271.5 3 417.0 4 310.5 5 227.0 6 521.5 7 1280.0 8 1888.5 9 1760.0 10 1206.5 11 815.5 12 752.0 13 784.5 14 862.5 15 937.0 16 1029.0 17 1111.0 18 1202.0 19 1266.0 20 1318.5 21 1459.0 22 1554.0 23 1691.0 24 1899.0 25 2295.0 26 2891.0 27 3731.5 28 4990.0 29 6866.5 30 9561.5 31 13104.5 32 17492.0 33 22612.5 34 28091.0 35 34331.0 36 42138.0 37 50199.0 38 58556.0 39 67526.0 40 76667.0 41 85951.0 42 95861.0 43 106803.0 44 117807.0 45 129169.0 46 139054.0 47 147557.5 48 157775.5 49 164217.0 50 163878.0 51 163155.5 52 163745.5 53 164077.5 54 163100.5 55 158544.0 56 149449.0 57 137892.5 58 126911.5 59 114878.5 60 100285.0 61 86087.0 62 71403.5 63 54930.0 64 40934.5 65 31328.5 66 24440.0 67 19257.5 68 15150.0 69 11920.0 70 9395.0 71 7278.0 72 5686.5 73 4678.0 74 3720.0 75 2919.5 76 2238.5 77 1508.5 78 937.0 79 553.5 80 348.0 81 219.5 82 132.0 83 69.5 84 30.5 85 12.5 86 7.0 87 6.5 88 7.0 89 3.5 90 0.5 91 1.0 92 1.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3142729602856896 2 0.0 3 0.006202937977266232 4 0.06034018684135321 5 5.261420605716893E-4 6 0.06507546538649842 7 0.07568138166012774 8 0.10677914660865444 9 0.09373636184395623 10-11 0.09861009882609398 12-13 0.09877624895048503 14-15 0.06593390769585222 16-17 0.035708430900378604 18-19 0.03912835429409458 20-21 0.02837013373977346 22-23 0.04243751093821652 24-25 0.034088467187565766 26-27 0.020948761516972787 28-29 0.023801005319019315 30-31 0.0028107062709487613 32-33 0.005206037230919874 34-35 0.00786443922117683 36-37 0.010896678991313672 38-39 0.016435016471015664 40-41 0.02114260332876236 42-43 0.0035860735181070407 44-45 0.014676594321210283 46-47 0.02409176803670367 48-49 0.0026860936776554665 50-51 0.007518293128695456 52-53 0.0026860936776554665 54-55 0.004153753109776495 56-57 0.003502998455911511 58-59 0.0012045884018351835 60-61 0.005372187355310933 62-63 0.015631957536458876 64-65 0.007185992879913336 66-67 0.03926681273108713 68-69 0.06179400042977499 70-71 0.012378184267133956 72-73 0.03242696594365517 74-75 0.05102193403175461 76-77 0.3039301150423461 78-79 0.07389526782292384 80-81 0.03490537196582181 82-83 0.02892396748774366 84-85 0.01992416908322792 86-87 0.11942040190607423 88-89 0.5293958338410143 90-91 0.13348777910451728 92-93 0.04857121969698648 94-95 0.008432118812846286 96-97 0.005842946041085603 98-99 0.011284362614892811 100-101 0.00836288959435001 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3611192.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.11427511785971 #Duplication Level Percentage of deduplicated Percentage of total 1 72.94308415799132 39.47262124070737 2 14.731863527734882 15.944082318772173 3 5.148660279888075 8.358480566227795 4 2.3857183228286996 5.164056707010845 5 1.2472887589415051 3.3748063526387204 6 0.8064599692971747 2.6184597990052803 7 0.5226875655720642 1.9799401106835712 8 0.3700881704835906 1.602164246033151 9 0.28670365646050233 1.3963284488699963 >10 1.4436336464657455 13.95232208392172 >50 0.08377946705388233 3.1109015138827725 >100 0.029520503479164732 2.616854055403057 >500 3.0718428220634077E-4 0.12905031507523168 >1k 2.0478952119541352E-4 0.2799322417683023 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4192 0.11608355357455379 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.7691687398509966E-5 2 0.0 0.0 0.0 0.0 2.7691687398509966E-5 3 0.0 0.0 0.0 0.0 2.7691687398509966E-5 4 0.0 0.0 0.0 0.0 2.7691687398509966E-5 5 0.0 0.0 0.0 0.0 2.7691687398509966E-5 6 0.0 0.0 0.0 0.0 2.7691687398509966E-5 7 0.0 0.0 0.0 0.0 2.7691687398509966E-5 8 0.0 0.0 0.0 0.0 5.538337479701993E-5 9 0.0 0.0 0.0 0.0 5.538337479701993E-5 10-11 0.0 0.0 0.0 0.0 8.30750621955299E-5 12-13 0.0 0.0 0.0 0.0 1.799959680903148E-4 14-15 0.0 0.0 0.0 1.3845843699254983E-5 2.2153349918807976E-4 16-17 0.0 0.0 0.0 2.7691687398509966E-5 2.492251865865897E-4 18-19 0.0 0.0 0.0 4.153753109776495E-5 2.492251865865897E-4 20-21 0.0 0.0 0.0 5.538337479701993E-5 2.492251865865897E-4 22-23 0.0 0.0 0.0 5.538337479701993E-5 2.907627176843546E-4 24-25 0.0 0.0 0.0 1.1076674959403986E-4 3.323002487821196E-4 26-27 0.0 0.0 0.0 2.0768765548882475E-4 3.323002487821196E-4 28-29 0.0 0.0 0.0 6.507546538649842E-4 3.323002487821196E-4 30-31 0.0 0.0 0.0 0.002409176803670367 3.4614609248137453E-4 32-33 0.0 0.0 0.0 0.006009096165476662 4.153753109776495E-4 34-35 0.0 0.0 0.0 0.010592070429930062 4.2922115467690445E-4 36-37 8.30750621955299E-5 0.0 0.0 0.017445763061061277 4.4306699837615946E-4 38-39 8.30750621955299E-5 0.0 0.0 0.029034734237337698 4.707586857746694E-4 40-41 8.30750621955299E-5 0.0 0.0 0.04242366509451727 5.399879042709444E-4 42-43 8.30750621955299E-5 0.0 0.0 0.055438758171816954 5.676795916694543E-4 44-45 8.30750621955299E-5 0.0 0.0 0.0679415550322442 5.953712790679642E-4 46-47 8.30750621955299E-5 0.0 0.0 0.08163509445080738 6.507546538649842E-4 48-49 8.30750621955299E-5 0.0 0.0 0.09545324646266384 6.922921849627492E-4 50-51 8.30750621955299E-5 0.0 0.0 0.10899448160053524 6.922921849627492E-4 52-53 8.30750621955299E-5 0.0 0.0 0.12308955048637679 8.30750621955299E-4 54-55 8.30750621955299E-5 0.0 0.0 0.13777999065128632 9.138256841508289E-4 56-57 8.30750621955299E-5 0.0 0.0 0.15277503937757947 9.83054902647104E-4 58-59 8.30750621955299E-5 0.0 0.0 0.16821315510224877 0.0010384382774441237 60-61 8.30750621955299E-5 0.0 0.0 0.18374819173281287 0.0011076674959403987 62-63 8.30750621955299E-5 0.0 0.0 0.19897861980199336 0.0011353591833389086 64-65 1.1076674959403986E-4 0.0 0.0 0.21465211486955 0.0011492050270381635 66-67 1.1076674959403986E-4 0.0 0.0 0.2311978980901597 0.0011907425581359284 68-69 1.1076674959403986E-4 0.0 0.0 0.248643661151221 0.0012322800892336934 70-71 1.1076674959403986E-4 0.0 0.0 0.26694786652163605 0.0012738176203314585 72-73 1.1076674959403986E-4 0.0 0.0 0.28475362151887795 0.0015091969632187931 74-75 1.1076674959403986E-4 0.0 0.0 0.30240707223542806 0.001606117869113578 76-77 1.1076674959403986E-4 0.0 0.0 0.322331241318656 0.001619963712812833 78-79 1.1076674959403986E-4 0.0 0.0 0.34170157665391376 0.0017168846187076178 80-81 1.1076674959403986E-4 0.0 0.0 0.3606011533033968 0.001744576306106128 82-83 1.1076674959403986E-4 0.0 0.0 0.37961149670247385 0.0018276513683016576 84-85 1.1076674959403986E-4 0.0 0.0 0.399549511629401 0.0018276513683016576 86-87 1.1076674959403986E-4 0.0 0.0 0.42089980261365223 0.0019384181178956975 88-89 1.1076674959403986E-4 0.0 0.0 0.44209778931721155 0.0020768765548882474 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7225 0.0 34.95289 1 TCAACGC 8795 0.0 28.033638 4 CAACGCA 8965 0.0 27.538994 5 TATCAAC 9110 0.0 27.114952 2 GGTATCA 4635 0.0 26.728132 1 ATCAACG 9235 0.0 26.646168 3 AACGCAG 9795 0.0 25.44813 6 GTACATG 12155 0.0 24.89223 1 TACATGG 12625 0.0 23.591742 2 ACATGGG 12830 0.0 21.993872 3 GTACCTG 3890 0.0 21.68047 1 ACGCAGA 11445 0.0 21.613693 7 GTATAGG 755 0.0 21.457394 1 GAGTACA 9215 0.0 20.941353 1 CGCAGAG 12045 0.0 20.379372 8 AGTACAT 8875 0.0 20.28592 2 TACCTGG 4010 0.0 19.427786 2 AGAGTAC 10720 0.0 18.026176 10-11 GCAGAGT 13770 0.0 17.79192 9 CATGGGG 9900 0.0 17.130932 4 >>END_MODULE