##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921476_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4053748 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.164749264137782 31.0 31.0 34.0 27.0 34.0 2 30.255857788890676 31.0 31.0 34.0 26.0 34.0 3 30.39038687160623 31.0 31.0 34.0 26.0 34.0 4 33.887586006826275 37.0 35.0 37.0 30.0 37.0 5 33.86243545479393 37.0 35.0 37.0 30.0 37.0 6 33.96553288462923 37.0 35.0 37.0 30.0 37.0 7 33.83981145349933 37.0 35.0 37.0 30.0 37.0 8 33.81716475715807 37.0 35.0 37.0 30.0 37.0 9 35.245992844153115 39.0 35.0 39.0 29.0 39.0 10-11 35.10763606913898 39.0 35.0 39.0 29.0 39.0 12-13 34.938558958277625 39.0 35.0 39.0 28.0 39.0 14-15 35.91644510216224 39.5 36.0 41.0 27.0 41.0 16-17 35.76041122931174 39.0 36.0 41.0 27.0 41.0 18-19 35.56790826662141 39.0 36.0 40.5 27.0 41.0 20-21 35.444043759010185 39.0 36.0 40.0 27.0 41.0 22-23 35.48323243082698 39.0 36.0 41.0 27.0 41.0 24-25 35.34488539988179 39.0 36.0 41.0 26.0 41.0 26-27 35.06134088749474 39.0 35.0 40.0 24.5 41.0 28-29 34.81310481065917 39.0 34.5 40.0 24.0 41.0 30-31 34.55036425549886 38.5 34.0 40.0 23.5 41.0 32-33 34.264646445709005 38.0 34.0 40.0 21.5 41.0 34-35 33.83201175800765 38.0 33.5 40.0 17.5 41.0 36-37 33.433232406158446 38.0 33.0 40.0 15.5 41.0 38-39 33.18440502468333 38.0 33.0 40.0 14.0 41.0 40-41 32.908579911726136 38.0 32.0 40.0 9.0 41.0 42-43 32.60884495040146 38.0 31.5 40.0 9.0 41.0 44-45 32.2820386220357 37.0 31.0 40.0 8.0 41.0 46-47 31.9768145429859 37.0 31.0 40.0 7.0 41.0 48-49 31.746165893883884 37.0 30.0 40.0 4.0 41.0 50-51 31.023499734073255 36.0 29.5 38.5 2.0 39.5 52-53 31.564538545563266 36.5 30.5 39.0 2.0 40.0 54-55 31.984451796214266 37.0 31.0 40.0 2.0 40.5 56-57 31.818003610485903 37.0 31.0 40.0 2.0 41.0 58-59 31.47003661796441 36.0 31.0 39.0 2.0 41.0 60-61 30.99034806801015 36.0 30.0 39.0 2.0 40.0 62-63 30.4933657691598 35.0 29.0 39.0 2.0 40.0 64-65 29.932342982346213 35.0 28.5 38.0 2.0 40.0 66-67 29.421771407596133 34.5 28.0 38.0 2.0 40.0 68-69 28.88921338968283 34.0 27.5 37.0 2.0 39.0 70-71 28.34034972080159 34.0 26.0 36.0 2.0 39.0 72-73 27.763301887537164 33.5 26.0 36.0 2.0 39.0 74-75 27.149521134515513 33.0 25.0 35.0 2.0 37.5 76-77 26.540342048889077 32.5 23.5 35.0 2.0 37.0 78-79 25.94934095557987 32.0 21.5 35.0 2.0 36.5 80-81 25.333554897837754 32.0 19.5 34.5 2.0 36.0 82-83 24.676289448678112 31.0 17.0 34.0 2.0 35.5 84-85 24.02605675044428 31.0 9.0 34.0 2.0 35.0 86-87 23.37197699511662 30.5 4.5 34.0 2.0 35.0 88-89 22.685125099044143 30.0 2.0 34.0 2.0 35.0 90-91 21.90202388012279 29.0 2.0 34.0 2.0 35.0 92-93 21.04244269747404 29.0 2.0 34.0 2.0 35.0 94-95 20.094894403894862 27.5 2.0 33.0 2.0 34.5 96-97 19.16778028629308 26.5 2.0 33.0 2.0 34.0 98 18.54178528117683 25.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 141780.0 3 24621.0 4 18733.0 5 15678.0 6 15066.0 7 15813.0 8 17688.0 9 20385.0 10 23121.0 11 24924.0 12 27673.0 13 30361.0 14 26205.0 15 26416.0 16 29416.0 17 32997.0 18 36601.0 19 37239.0 20 39116.0 21 42288.0 22 46658.0 23 51230.0 24 56655.0 25 63512.0 26 71629.0 27 81440.0 28 93212.0 29 109165.0 30 128279.0 31 153839.0 32 189411.0 33 241786.0 34 319812.0 35 434741.0 36 566848.0 37 563449.0 38 226878.0 39 9083.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.11197946681638 16.914024109883762 13.149342722481036 24.824653700818825 2 16.106129297138487 18.53163223575469 38.883742947777705 26.478495519329115 3 20.95242984781086 21.730727554829112 26.955950600853136 30.36089199650689 4 13.927806099403725 14.343012599352631 34.32974336772901 37.39943793351463 5 15.928762489299118 35.45832851978787 32.315601712931006 16.297307277982004 6 35.91008605467895 32.60196359986561 16.289416837055473 15.198533508399963 7 31.961932534445026 29.721414109306004 18.841677764165723 19.474975592083247 8 28.06221583780398 33.42858968699874 18.552412666117764 19.956781809079523 9 26.79636762959631 16.91232725775377 18.818983716900707 37.472321395749205 10-11 27.00976902949953 24.75424457485169 25.6372321041964 22.598754291452376 12-13 27.208245271947007 21.732631136680524 26.326700064305935 24.732423527066533 14-15 24.046259004236763 23.42306811688459 24.07482978427334 28.455843094605303 16-17 24.55708607385972 26.50428514558935 24.56005908520811 24.378569695342822 18-19 24.52201248469834 26.014432647951423 25.812356324215134 23.651198543135102 20-21 25.09051235026946 25.011776975198728 25.701408990399667 24.196301684132145 22-23 24.76107222869405 24.75602235034179 25.665148616438284 24.817756804525875 24-25 24.60681796132623 24.96250795201709 25.793097217158138 24.63757686949854 26-27 24.669794247299272 24.98725989469167 25.954767194327594 24.388178663681465 28-29 24.512187293216 25.443937463581328 25.65049924446683 24.393375998735838 30-31 24.788036782293513 25.097180533459017 25.579266573142323 24.535516111105146 32-33 24.604977002284347 25.16590953565565 25.588774341068994 24.64033912099101 34-35 24.862624621724684 25.147003697893915 25.676629387216586 24.313742293164808 36-37 24.8205779115928 25.05713045553804 25.689248799829105 24.43304283304005 38-39 24.7378087927425 25.199931767077615 25.65406528650074 24.40819415367915 40-41 24.882941915744478 25.194075449851006 25.546729016597965 24.376253617806547 42-43 24.696443238820144 25.13477390637776 25.457072949736954 24.711709905065145 44-45 24.79296037370611 25.054240680690317 25.45128853934128 24.701510406262294 46-47 25.031167373912393 25.194285413173056 25.378431743296147 24.396115469618397 48-49 24.85553884105268 25.196927121158435 25.33822073441933 24.609313303369547 50-51 24.527870252152606 25.391317566516143 25.49129280519261 24.58951937613864 52-53 24.786968059231494 25.475639381238196 25.260882535724143 24.476510023806167 54-55 24.592739621939305 25.097461503868995 25.47350008528851 24.836298788903193 56-57 24.752569907510857 25.187561273157318 25.43880446878327 24.621064350548554 58-59 24.985777015086096 25.148258113610066 25.38702077776947 24.478944093534366 60-61 24.87247762104536 25.060027488963186 25.566112072391324 24.501382817600128 62-63 24.623821228806424 25.263494408191946 25.526945414241208 24.585738948760422 64-65 24.657482256449743 25.2718833812415 25.45150178948653 24.61913257282223 66-67 24.705155490987767 25.24636697647211 25.29748084315549 24.75099668938463 68-69 24.60845406877915 25.225441172750436 25.389165034346917 24.776939724123494 70-71 24.788898928041583 25.02200557482825 25.42306352800614 24.76603196912403 72-73 24.84838331088147 25.00165740235546 25.446733442736345 24.703225844026726 74-75 24.5386549361063 25.460508783238904 25.35005779009058 24.650778490564214 76-77 24.749584644330643 25.0914476384205 25.324787811739796 24.834179905509064 78-79 24.755326272112573 24.975343053704563 25.46418250204318 24.80514817213968 80-81 24.782657124523432 25.092197339042 25.374652939665616 24.750492596768954 82-83 24.899413103169742 25.030191249872512 25.36899005141776 24.701405595539985 84-85 24.826996863768425 25.143072912304937 25.324401011483 24.70552921244364 86-87 24.69763467097662 25.147778863305074 25.393831259172302 24.760755206546005 88-89 24.696500917204496 25.001421998458667 25.297110932857013 25.004966151479824 90-91 24.84565958627799 24.849760628016927 25.281906352526047 25.022673433179037 92-93 24.9539398280891 25.115755954866913 25.330201658748486 24.600102558295493 94-95 24.933412831523313 24.86971267649193 25.355548715935722 24.84132577604904 96-97 24.726253055829545 24.940648978837817 25.509249169469793 24.823848795862844 98 24.940066679303772 25.044384727936798 25.11639143799085 24.899157154768588 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 511.0 1 373.0 2 377.0 3 528.0 4 432.5 5 392.0 6 664.5 7 1321.5 8 1937.0 9 1931.5 10 1627.5 11 1486.0 12 1608.0 13 1873.5 14 2160.0 15 2506.0 16 2823.0 17 2916.0 18 2958.5 19 2937.5 20 2717.0 21 2495.0 22 2423.5 23 2470.5 24 2671.0 25 3089.0 26 3714.0 27 4750.5 28 6239.0 29 8428.5 30 11844.5 31 16257.5 32 22120.5 33 28870.5 34 36699.5 35 45835.5 36 55659.5 37 66119.0 38 77125.5 39 88207.5 40 99020.5 41 110633.0 42 122286.5 43 134317.0 44 145946.0 45 157494.0 46 174765.0 47 192213.0 48 197279.0 49 192472.5 50 189127.0 51 187867.0 52 186222.5 53 185543.5 54 182753.5 55 175534.5 56 163979.0 57 152250.0 58 140243.5 59 125625.5 60 109835.5 61 92404.0 62 74300.0 63 57158.0 64 42420.0 65 31890.0 66 24444.0 67 18633.5 68 14333.0 69 10946.5 70 8186.5 71 6231.5 72 4875.5 73 3699.0 74 2889.0 75 2198.0 76 1548.0 77 965.0 78 567.5 79 337.0 80 194.0 81 115.0 82 74.5 83 50.5 84 35.5 85 24.5 86 19.0 87 19.0 88 12.5 89 7.5 90 5.5 91 7.0 92 6.5 93 3.5 94 5.5 95 5.5 96 4.0 97 3.5 98 1.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.47617661482657525 2 0.04960841177103263 3 0.05777369486213746 4 0.055997560775854834 5 0.06611165765607531 6 0.06707373028614506 7 0.04400865569344715 8 0.020351536405321693 9 0.013000314770429736 10-11 0.015615178841901372 12-13 0.011532537296348958 14-15 0.016182555008352764 16-17 0.015257485171747232 18-19 0.05694729914143652 20-21 0.08564913260518414 22-23 0.10226338687061949 24-25 0.07126738021209014 26-27 0.08747460374941905 28-29 0.08949742312546316 30-31 0.05911812969133749 32-33 0.034264586747868885 34-35 0.39912446456957856 36-37 0.6282457617000365 38-39 0.5781193108205048 40-41 0.5714094709389927 42-43 0.5448908022896342 44-45 0.5300896849039457 46-47 0.5201482677265582 48-49 0.5095778030602791 50-51 0.5241939064786465 52-53 0.6053657010746598 54-55 0.5750357446984864 56-57 0.53281555735581 58-59 0.509738148498624 60-61 0.5234785191383382 62-63 0.5350357249636633 64-65 0.5531670937611316 66-67 0.5804628210732389 68-69 0.5341723264494981 70-71 0.48209706178085077 72-73 0.46424938106660796 74-75 0.4445638949436423 76-77 0.4601174024631033 78-79 0.4532595514077343 80-81 0.4501143139632755 82-83 0.46999714831805034 84-85 0.4364849517039539 86-87 0.4395685178259724 88-89 0.4670615933698888 90-91 0.4486712050181708 92-93 0.4438978446612863 94-95 0.45478900020425544 96-97 0.4495469377968241 98 0.4443542124473451 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4053748.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.49648833047756 #Duplication Level Percentage of deduplicated Percentage of total 1 77.47939289310486 46.09751795117099 2 12.837758675491063 15.27603118451682 3 4.190018310597449 7.478741265628452 4 1.848351820925871 4.3988177017733205 5 0.9926181676390959 2.952864761377975 6 0.622285872361268 2.2214294485897934 7 0.3948491917972451 1.6444498232444298 8 0.288155518627058 1.3715393161085971 9 0.186988544051293 1.001264555617267 >10 1.0736653268970744 11.366360339781254 >50 0.061191960048837694 2.4836395730539444 >100 0.023099200780684396 2.2949945311068434 >500 9.163946114173514E-4 0.37060267613338427 >1k 6.664687688265232E-4 0.8433849838831475 >5k 4.165429805165686E-5 0.1983618880138887 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 8004 0.19744690592508463 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4078 0.10059826116472952 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.4668528976147507E-5 2 0.0 0.0 0.0 0.0 2.4668528976147507E-5 3 0.0 0.0 0.0 0.0 2.4668528976147507E-5 4 0.0 0.0 0.0 0.0 2.4668528976147507E-5 5 0.0 4.9337057952295014E-5 0.0 0.0 2.4668528976147507E-5 6 0.0 4.9337057952295014E-5 0.0 0.0 2.4668528976147507E-5 7 0.0 4.9337057952295014E-5 0.0 2.4668528976147507E-5 2.4668528976147507E-5 8 2.4668528976147507E-5 4.9337057952295014E-5 0.0 2.4668528976147507E-5 2.4668528976147507E-5 9 2.4668528976147507E-5 4.9337057952295014E-5 0.0 4.9337057952295014E-5 2.4668528976147507E-5 10-11 2.4668528976147507E-5 4.9337057952295014E-5 0.0 9.867411590459003E-5 2.4668528976147507E-5 12-13 2.4668528976147507E-5 4.9337057952295014E-5 0.0 9.867411590459003E-5 2.4668528976147507E-5 14-15 2.4668528976147507E-5 4.9337057952295014E-5 0.0 1.1100838039266378E-4 4.9337057952295014E-5 16-17 2.4668528976147507E-5 4.9337057952295014E-5 0.0 1.7267970283303254E-4 9.867411590459003E-5 18-19 2.4668528976147507E-5 4.9337057952295014E-5 0.0 1.8501396732110628E-4 9.867411590459003E-5 20-21 2.4668528976147507E-5 4.9337057952295014E-5 0.0 2.590195542495488E-4 1.2334264488073754E-4 22-23 2.4668528976147507E-5 7.400558692844251E-5 0.0 3.330251411779913E-4 1.7267970283303254E-4 24-25 2.4668528976147507E-5 8.633985141651627E-5 0.0 4.193649925945076E-4 1.9734823180918005E-4 26-27 2.4668528976147507E-5 9.867411590459003E-5 0.0 5.673761664513927E-4 1.9734823180918005E-4 28-29 2.4668528976147507E-5 9.867411590459003E-5 0.0 9.620726300697527E-4 1.9734823180918005E-4 30-31 2.4668528976147507E-5 9.867411590459003E-5 0.0 0.0029108864191854057 2.096824962972538E-4 32-33 2.4668528976147507E-5 1.1100838039266378E-4 0.0 0.00716620766757085 3.206908766899176E-4 34-35 2.4668528976147507E-5 1.4801117385688503E-4 0.0 0.012297261694609532 3.453594056660651E-4 36-37 2.4668528976147507E-5 1.8501396732110628E-4 0.0 0.021116260803582265 3.453594056660651E-4 38-39 2.4668528976147507E-5 2.2201676078532754E-4 0.0 0.03432625807030926 3.7002793464221257E-4 40-41 2.4668528976147507E-5 2.2201676078532754E-4 0.0 0.048103631503487634 3.7002793464221257E-4 42-43 2.4668528976147507E-5 2.7135381873762257E-4 0.0 0.06260872654146236 3.7002793464221257E-4 44-45 2.4668528976147507E-5 3.453594056660651E-4 0.0 0.078433587879661 3.7002793464221257E-4 46-47 2.4668528976147507E-5 3.453594056660651E-4 0.0 0.09390075554770548 3.7002793464221257E-4 48-49 2.4668528976147507E-5 3.7002793464221257E-4 0.0 0.10934325468677382 3.7002793464221257E-4 50-51 2.4668528976147507E-5 3.946964636183601E-4 0.0 0.1246254083874972 3.7002793464221257E-4 52-53 2.4668528976147507E-5 4.193649925945076E-4 0.0 0.14000623620412517 4.193649925945076E-4 54-55 2.4668528976147507E-5 4.5636778605872885E-4 0.0 0.15649714782467977 4.687020505468026E-4 56-57 2.4668528976147507E-5 4.687020505468026E-4 0.0 0.17573860042607484 4.687020505468026E-4 58-59 2.4668528976147507E-5 5.180391084990976E-4 0.0 0.19395630907495975 4.687020505468026E-4 60-61 2.4668528976147507E-5 5.427076374752451E-4 0.0 0.21291407359312914 4.687020505468026E-4 62-63 2.4668528976147507E-5 5.427076374752451E-4 0.0 0.23204451781413152 5.180391084990976E-4 64-65 2.4668528976147507E-5 5.427076374752451E-4 0.0 0.24974418735451734 5.180391084990976E-4 66-67 2.4668528976147507E-5 5.427076374752451E-4 0.0 0.2695776846513399 5.180391084990976E-4 68-69 2.4668528976147507E-5 5.55041901963319E-4 0.0 0.2900032266435901 5.180391084990976E-4 70-71 2.4668528976147507E-5 5.673761664513927E-4 0.0 0.3114895153818146 5.920446954275401E-4 72-73 2.4668528976147507E-5 5.673761664513927E-4 0.0 0.33080497357013805 9.49738365581679E-4 74-75 2.4668528976147507E-5 5.673761664513927E-4 0.0 0.3522172567214341 9.620726300697527E-4 76-77 2.4668528976147507E-5 5.673761664513927E-4 0.0 0.37276614135856495 9.620726300697527E-4 78-79 2.4668528976147507E-5 5.673761664513927E-4 0.0 0.3959052215381913 9.620726300697527E-4 80-81 3.700279346422126E-5 5.673761664513927E-4 0.0 0.41869894231215166 9.867411590459003E-4 82-83 4.9337057952295014E-5 5.920446954275401E-4 0.0 0.440012551347543 0.0010114096880220478 84-85 4.9337057952295014E-5 6.167132244036877E-4 0.0 0.46239924139339694 0.0010114096880220478 86 4.9337057952295014E-5 6.167132244036877E-4 0.0 0.47906283271678457 0.0010360782169981952 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 4125 0.0 27.117682 1 TACCTGG 4490 0.0 24.812035 2 GTACATG 12400 0.0 24.761353 1 TACATGG 12715 0.0 23.43686 2 ACATGGG 13325 0.0 21.985487 3 GAGTACA 9640 0.0 21.20197 1 ACCGCTC 1665 0.0 21.185623 8 AGTACAT 9100 0.0 20.202513 2 GTATCAA 15340 0.0 18.965399 1 GTATAGG 900 0.0 17.901762 1 CATGGGG 10420 0.0 17.423279 4 ACCTGGG 5890 0.0 17.279856 3 AGAGTAC 11045 0.0 17.275265 10-11 TATCAAC 17295 0.0 16.673721 2 TCAACGC 17135 0.0 16.561853 4 CAACGCA 17320 0.0 16.411423 5 AACCGCT 1770 0.0 16.309044 7 ATCAACG 17615 0.0 16.240686 3 GTATTAC 770 0.0 16.141478 1 AACGCAG 17880 0.0 16.07254 6 >>END_MODULE