##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921476_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4053748 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.913771156963875 33.0 31.0 34.0 30.0 34.0 2 32.02990294413959 34.0 31.0 34.0 30.0 34.0 3 32.15653957769452 34.0 31.0 34.0 30.0 34.0 4 35.69818720847966 37.0 35.0 37.0 35.0 37.0 5 35.49729805602124 37.0 35.0 37.0 33.0 37.0 6 35.53526785582133 37.0 35.0 37.0 33.0 37.0 7 35.46730581180675 37.0 35.0 37.0 33.0 37.0 8 35.41933119670981 37.0 35.0 37.0 33.0 37.0 9 37.03889807654546 39.0 37.0 39.0 34.0 39.0 10-11 36.952371854392524 39.0 37.0 39.0 33.0 39.0 12-13 36.83228385188226 39.0 37.0 39.0 33.0 39.0 14-15 38.1156021538586 40.0 38.0 41.0 33.0 41.0 16-17 38.01771225049016 40.0 38.0 41.0 33.0 41.0 18-19 37.915219569642716 40.0 38.0 41.0 33.0 41.0 20-21 37.798506221896375 40.0 38.0 41.0 33.0 41.0 22-23 37.76354277572261 40.0 38.0 41.0 32.5 41.0 24-25 37.81546830242038 40.0 38.0 41.0 33.0 41.0 26-27 37.704715734673194 40.0 38.0 41.0 32.5 41.0 28-29 37.57042852688426 40.0 38.0 41.0 32.0 41.0 30-31 37.437415818644865 40.0 37.5 41.0 32.0 41.0 32-33 37.280127057725345 40.0 37.0 41.0 31.5 41.0 34-35 37.1278576023966 40.0 37.0 41.0 31.0 41.0 36-37 37.027107753121314 40.0 37.0 41.0 31.0 41.0 38-39 36.99629367686398 40.0 37.0 41.0 31.0 41.0 40-41 36.83832751813877 40.0 36.5 41.0 30.5 41.0 42-43 36.59790593791227 39.5 36.0 41.0 30.0 41.0 44-45 36.39332600349109 39.0 36.0 41.0 30.0 41.0 46-47 36.124969287681424 39.0 35.0 40.0 29.5 41.0 48-49 35.79155364368974 39.0 35.0 40.0 28.5 41.0 50-51 35.51421462310928 38.5 35.0 40.0 28.0 41.0 52-53 35.2021870871105 38.0 34.5 40.0 27.0 41.0 54-55 34.8753589270966 38.0 34.0 40.0 26.5 41.0 56-57 34.47901904607785 38.0 34.0 40.0 26.0 41.0 58-59 34.07634206665042 37.0 33.0 40.0 25.0 41.0 60-61 33.628264756467345 36.5 33.0 39.0 23.5 41.0 62-63 33.18772627208203 36.0 32.0 39.0 22.5 40.0 64-65 32.662340505625906 35.5 31.5 39.0 22.0 40.0 66-67 32.11610391173797 35.0 31.0 38.0 20.0 40.0 68-69 31.59173917569617 35.0 31.0 37.5 18.5 39.5 70-71 31.017591374698178 34.5 30.0 37.0 17.0 39.0 72-73 30.44774502509776 34.0 29.5 36.0 12.5 39.0 74-75 29.91682475082319 34.0 29.0 35.5 8.0 38.0 76-77 28.65913643373984 32.5 27.5 34.5 7.5 36.0 78-79 29.594457154218762 34.0 29.0 35.0 7.5 37.0 80-81 29.606922285253056 34.0 29.0 35.0 7.0 36.5 82-83 29.255447427911157 34.0 29.0 35.0 2.0 36.0 84-85 28.745938573389367 34.0 29.0 35.0 2.0 35.5 86-87 28.212668991757752 33.0 27.5 35.0 2.0 35.0 88-89 27.646784654596193 33.0 26.5 35.0 2.0 35.0 90-91 27.137079808611688 32.5 25.5 34.5 2.0 35.0 92-93 26.67494020348576 32.0 25.0 34.0 2.0 35.0 94-95 26.146049162404765 32.0 24.5 34.0 2.0 35.0 96-97 25.34097494466849 32.0 21.5 34.0 2.0 35.0 98-99 24.28638891712065 31.0 10.0 34.0 2.0 35.0 100-101 20.690888037440907 27.0 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 26249.0 3 13690.0 4 8075.0 5 6026.0 6 5432.0 7 5644.0 8 6573.0 9 7781.0 10 9288.0 11 11017.0 12 13011.0 13 15310.0 14 17092.0 15 19139.0 16 21777.0 17 24842.0 18 25541.0 19 24083.0 20 24709.0 21 26145.0 22 27876.0 23 30902.0 24 35371.0 25 40992.0 26 48675.0 27 58885.0 28 70932.0 29 87363.0 30 106304.0 31 132216.0 32 169899.0 33 224955.0 34 315193.0 35 467112.0 36 710031.0 37 851178.0 38 354515.0 39 9925.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.33570313391258 17.37355255040415 13.539786195798204 24.750958119885066 2 16.204633341786415 18.855118769099608 38.50542756974533 26.434820319368647 3 20.93261924856303 21.906200759987634 27.158641436373177 30.002538555076157 4 14.155143730222594 14.678106503033565 34.33686138413463 36.82988838260921 5 15.998755715101186 35.30739806805281 32.45824713708399 16.235599079762018 6 35.87856222324742 32.75911223932898 16.144121274863146 15.218204262560453 7 32.03018577647476 29.675010899130093 18.853841060812456 19.440962263582687 8 28.061006654746123 33.510371788163305 18.51268436738426 19.915937189706316 9 26.595160242553295 16.9413238605963 18.9035078081193 37.56000808873111 10-11 26.963357540070998 24.833134995372113 25.725316306763208 22.47819115779368 12-13 27.163810606956616 21.69641576255572 26.464439976325497 24.675333654162163 14-15 23.939556370030065 23.492374319220495 24.158469707279163 28.409599603470276 16-17 24.470252912706712 26.523451260553454 24.68371259442969 24.322583232310148 18-19 24.420029090471168 26.070743050787897 25.92774615972712 23.581481699013818 20-21 25.027401958728035 24.968563624115696 25.881304239469184 24.12273017768708 22-23 24.6517460696651 24.72131541591561 25.921281754124802 24.705656760294488 24-25 24.540926138054555 25.012128621127538 25.897283534341888 24.549661706476016 26-27 24.5825033158548 24.994383618647152 26.094417138049973 24.328695927448074 28-29 24.406347606816716 25.424897505324445 25.864855691962894 24.303899195895944 30-31 24.695599467439376 25.066995623421317 25.689130439609208 24.548274469530096 32-33 24.46910116413449 25.14752278047276 25.794564313320762 24.588811742071996 34-35 24.76452617947843 25.10333858568425 25.839087112299904 24.29304812253742 36-37 24.629976076395664 25.145861946715765 25.87437603603368 24.34978594085489 38-39 24.593980282981104 25.212408534460373 25.881945845122157 24.31166533743637 40-41 24.73818558157535 25.197163476146876 25.699690235567285 24.364960706710484 42-43 24.57637540385214 25.176468875894464 25.61436158829451 24.63279413195889 44-45 24.649714607858737 25.02094027057667 25.648543926458018 24.68080119510658 46-47 24.800723354791014 25.23922450326109 25.63712392200619 24.3229282199417 48-49 24.72752022591001 25.223702739963088 25.54965593349894 24.499121100627967 50-51 24.465639354146514 25.384884478531948 25.637864072161044 24.51161209516049 52-53 24.662270714554165 25.50390653764561 25.384212044764066 24.44961070303616 54-55 24.60167789229197 25.09697867141471 25.549638315101586 24.75170512119173 56-57 24.676202359771978 25.249037155011383 25.499085753643914 24.57567473157273 58-59 24.9557873381449 25.172058732472507 25.43645896110297 24.43569496827962 60-61 24.83202328435061 25.163166103290507 25.636209651913962 24.368600960444926 62-63 24.532925324427403 25.28123908649987 25.653564072353568 24.53227151671916 64-65 24.63357035233371 25.283679610506795 25.51005341716269 24.572696619996805 66-67 24.67520865738434 25.33273761005395 25.312193300605568 24.679860431956136 68-69 24.583378020585712 25.292655735948756 25.433462234201354 24.690504009264178 70-71 24.796167234707163 25.092163434310866 25.466195556343944 24.64547377463803 72-73 24.873176487890632 25.041122946381993 25.504641353126306 24.581059212601065 74-75 24.48727544217414 25.519221810530734 25.33895235656528 24.654550390729845 76-77 24.658389073596943 25.12954925543973 25.443429230587654 24.768632440375672 78-79 24.630668770118707 25.068656165946418 25.589627139221705 24.71104792471317 80-81 24.72801118640634 25.222740444995996 25.4104925244024 24.638755844195263 82-83 24.76035620823468 25.201859681473472 25.472770210057444 24.565013900234405 84-85 24.696713487834675 25.28660123570972 25.409412272394015 24.607273004061586 86-87 24.62432062583305 25.311468065617042 25.47952881741786 24.58468249113205 88-89 24.60518374255659 25.182443198978767 25.356157888811687 24.856215169652955 90-91 24.703946836218766 25.071406596639395 25.361664361886792 24.862982205255047 92-93 24.86814567280876 25.326902478392427 25.408347359951822 24.396604488846986 94-95 24.7348751505056 25.181189565701363 25.396254842052535 24.6876804417405 96-97 24.507275853855564 25.189018259604858 25.605126716706422 24.69857916983316 98-99 24.69267944641223 25.304606742931323 25.330252253634715 24.672461557021727 100-101 25.100411737154815 24.579705289500723 25.506314335086866 24.813568638257596 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 153.0 1 126.5 2 232.0 3 361.0 4 265.5 5 200.5 6 428.0 7 1061.5 8 1615.5 9 1505.5 10 1061.5 11 765.5 12 668.5 13 677.5 14 734.0 15 817.0 16 925.0 17 991.5 18 1052.0 19 1111.5 20 1185.0 21 1291.0 22 1445.0 23 1739.0 24 2036.5 25 2448.5 26 3034.5 27 3845.5 28 5108.0 29 6900.5 30 9751.5 31 13724.5 32 18470.0 33 24205.5 34 31225.0 35 39365.5 36 48505.0 37 58775.5 38 69573.5 39 80148.5 40 90960.0 41 101285.0 42 112875.0 43 125722.0 44 137811.5 45 150396.5 46 160610.5 47 174608.0 48 196113.5 49 201144.5 50 190326.5 51 185077.5 52 183063.5 53 181031.5 54 179030.5 55 173260.5 56 162485.0 57 149408.5 58 136883.5 59 123743.5 60 107846.5 61 90962.5 62 74003.0 63 56911.5 64 41847.5 65 30877.5 66 23427.0 67 18279.0 68 14076.5 69 10618.5 70 8246.0 71 6359.0 72 4736.5 73 3615.0 74 2801.5 75 2116.0 76 1548.0 77 959.0 78 553.5 79 316.0 80 168.5 81 79.0 82 43.5 83 27.5 84 15.0 85 7.5 86 5.5 87 5.5 88 3.0 89 1.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3147950982646183 2 0.0 3 0.0064384860627744985 4 0.0594018177745632 5 3.453594056660651E-4 6 0.062189361548867866 7 0.0731668569432535 8 0.10254707495384519 9 0.09050883281348521 10-11 0.0947888225908468 12-13 0.09425844921785961 14-15 0.06417517813144774 16-17 0.03602838656966343 18-19 0.03853224226074241 20-21 0.027579415395332915 22-23 0.04134445456402322 24-25 0.03330251411779913 26-27 0.02149862300271255 28-29 0.02408881854520804 30-31 0.0030835661220184386 32-33 0.0054640791682166725 34-35 0.00801727191724794 36-37 0.01058279893076728 38-39 0.01604687809898395 40-41 0.020462544785714357 42-43 0.0031945745024111022 44-45 0.01364169652380957 46-47 0.023805130461982342 48-49 0.0024298501041505292 50-51 0.0063891490048222045 52-53 0.002331175988245939 54-55 0.0037126136109102 56-57 0.0033549199407560608 58-59 0.001110083803926638 60-61 0.005180391084990976 62-63 0.014024058722939856 64-65 0.006796179732928638 66-67 0.037767517862481836 68-69 0.06027755055321642 70-71 0.01200123934689576 72-73 0.031230357683802744 74-75 0.050212790730948254 76-77 0.30181945202316474 78-79 0.07268582062821863 80-81 0.03279680927378811 82-83 0.027591749659820985 84-85 0.019081107163050098 86-87 0.11389459828287304 88-89 0.5176937490934316 90-91 0.13018816167161845 92-93 0.04756092386601239 94-95 0.008078943239688309 96-97 0.005858775631835033 98-99 0.010040091293292036 100-101 0.007708915305046095 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4053748.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.21337607347161 #Duplication Level Percentage of deduplicated Percentage of total 1 73.95595615745455 40.833580201947164 2 14.602647763028342 16.125229652170457 3 4.878466412133031 8.080698020247025 4 2.224116574018359 4.912039393300677 5 1.1736651209798659 3.240100685448895 6 0.7196140846853486 2.3839393851299517 7 0.4634658158925755 1.7912658673052588 8 0.3306340728316919 1.4604338724767847 9 0.24836052029881175 1.2341540528155237 >10 1.2913551263714347 12.707097748283294 >50 0.07988846491428182 2.992255865316864 >100 0.029952740544545043 2.74666323079368 >500 0.0011173493616541583 0.4385358825786084 >1k 7.151035157697885E-4 0.8534557601492428 >5k 4.4693969735611765E-5 0.2005503820365157 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 8127 0.20048113498915077 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.4668528976147507E-5 0.0 2 0.0 0.0 0.0 2.4668528976147507E-5 0.0 3 0.0 0.0 0.0 2.4668528976147507E-5 0.0 4 0.0 0.0 0.0 2.4668528976147507E-5 0.0 5 0.0 0.0 0.0 2.4668528976147507E-5 0.0 6 0.0 0.0 0.0 2.4668528976147507E-5 0.0 7 0.0 0.0 0.0 2.4668528976147507E-5 0.0 8 0.0 0.0 0.0 2.4668528976147507E-5 0.0 9 0.0 0.0 0.0 2.4668528976147507E-5 0.0 10-11 0.0 2.4668528976147507E-5 0.0 6.167132244036877E-5 0.0 12-13 0.0 4.9337057952295014E-5 0.0 1.3567690936881128E-4 6.167132244036877E-5 14-15 0.0 8.633985141651627E-5 0.0 2.590195542495488E-4 9.867411590459003E-5 16-17 0.0 9.867411590459003E-5 0.0 3.8236219913028634E-4 2.2201676078532754E-4 18-19 0.0 9.867411590459003E-5 0.0 4.687020505468026E-4 2.2201676078532754E-4 20-21 0.0 9.867411590459003E-5 0.0 5.550419019633189E-4 2.343510252734013E-4 22-23 0.0 9.867411590459003E-5 0.0 6.290474888917614E-4 3.206908766899176E-4 24-25 0.0 1.2334264488073754E-4 0.0 7.52390133772499E-4 3.453594056660651E-4 26-27 0.0 1.4801117385688503E-4 0.0 9.250698366055315E-4 3.453594056660651E-4 28-29 0.0 1.4801117385688503E-4 0.0 0.0013074320357358178 3.453594056660651E-4 30-31 0.0 1.4801117385688503E-4 0.0 0.0032685800893395445 3.453594056660651E-4 32-33 2.4668528976147507E-5 1.4801117385688503E-4 0.0 0.007474564279772694 3.7002793464221257E-4 34-35 2.4668528976147507E-5 1.4801117385688503E-4 0.0 0.012482275661930638 3.7002793464221257E-4 36-37 2.4668528976147507E-5 1.603454383449588E-4 0.0 0.021128595068070338 3.7002793464221257E-4 38-39 2.4668528976147507E-5 2.0968249629725383E-4 0.0 0.03416591263196429 3.7002793464221257E-4 40-41 2.4668528976147507E-5 2.590195542495488E-4 0.0 0.04783227768475001 3.946964636183601E-4 42-43 2.4668528976147507E-5 2.7135381873762257E-4 0.0 0.06249771816106971 4.070307281064338E-4 44-45 2.4668528976147507E-5 2.7135381873762257E-4 0.0 0.07840891935068485 4.440335215706551E-4 46-47 2.4668528976147507E-5 2.8368808322569634E-4 0.0 0.09386375275424126 4.687020505468026E-4 48-49 2.4668528976147507E-5 2.9602234771377006E-4 0.0 0.10912123792598849 4.687020505468026E-4 50-51 2.4668528976147507E-5 2.9602234771377006E-4 0.0 0.12404569795655773 4.687020505468026E-4 52-53 2.4668528976147507E-5 3.453594056660651E-4 0.0 0.1392908488638169 5.303733729871713E-4 54-55 2.4668528976147507E-5 3.453594056660651E-4 0.0 0.15560908078153846 5.920446954275401E-4 56-57 2.4668528976147507E-5 3.453594056660651E-4 0.0 0.17439416559687482 6.043789599156138E-4 58-59 2.4668528976147507E-5 3.7002793464221257E-4 0.0 0.19189648690545147 6.167132244036877E-4 60-61 2.4668528976147507E-5 3.7002793464221257E-4 0.0 0.21036088084409788 6.167132244036877E-4 62-63 2.4668528976147507E-5 3.7002793464221257E-4 0.0 0.22882527478274428 6.167132244036877E-4 64-65 2.4668528976147507E-5 4.193649925945076E-4 0.0 0.24621658771092825 6.290474888917615E-4 66-67 2.4668528976147507E-5 4.193649925945076E-4 0.0 0.26540870325437105 6.413817533798352E-4 68-69 2.4668528976147507E-5 4.193649925945076E-4 0.0 0.28522986628670555 6.413817533798352E-4 70-71 2.4668528976147507E-5 4.563677860587289E-4 0.0 0.30648180399965663 6.413817533798352E-4 72-73 2.4668528976147507E-5 4.933705795229502E-4 0.0 0.3253038916084572 7.770586627486464E-4 74-75 2.4668528976147507E-5 4.933705795229502E-4 0.0 0.34593911609700456 8.140614562128677E-4 76-77 2.4668528976147507E-5 5.180391084990976E-4 1.2334264488073753E-5 0.36580961618729135 8.263957207009414E-4 78-79 2.4668528976147507E-5 5.180391084990976E-4 2.4668528976147507E-5 0.388652674019204 8.387299851890152E-4 80-81 2.4668528976147507E-5 5.180391084990976E-4 2.4668528976147507E-5 0.41080501303978445 8.387299851890152E-4 82-83 2.4668528976147507E-5 5.180391084990976E-4 2.4668528976147507E-5 0.4315882487021887 8.880670431413102E-4 84-85 2.4668528976147507E-5 5.180391084990976E-4 2.4668528976147507E-5 0.4534568996395435 8.880670431413102E-4 86-87 2.4668528976147507E-5 5.180391084990976E-4 2.4668528976147507E-5 0.4757202470405166 9.127355721174577E-4 88-89 2.4668528976147507E-5 5.180391084990976E-4 2.4668528976147507E-5 0.5004257788101283 9.374041010936052E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 4035 0.0 29.162922 1 TACCTGG 4405 0.0 25.340185 2 GTACATG 12215 0.0 24.25909 1 TACATGG 12535 0.0 22.736036 2 ACATGGG 12765 0.0 21.173372 3 TATCACG 375 0.0 20.266397 2 AGTACAT 8935 0.0 19.031645 2 GAGTACA 9690 0.0 18.928429 1 ACCTGGG 5815 0.0 18.21603 3 AGAGTAC 11150 0.0 17.94861 10-11 CATGGGG 10195 0.0 17.798143 4 GTATCAA 16355 0.0 17.710491 1 GTATAGG 1025 0.0 17.661896 1 GTATATA 905 0.0 17.371725 1 GTATAGC 1065 0.0 16.998539 1 TACACTA 765 0.0 16.1362 5 GTATAAG 1045 0.0 15.956196 1 TCAACGC 18090 0.0 15.780999 4 TAGACTG 1445 0.0 15.771129 5 CAACGCA 18220 0.0 15.634797 5 >>END_MODULE