##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921475_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7464921 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.198195131602866 31.0 31.0 34.0 27.0 34.0 2 30.30151893101079 31.0 31.0 34.0 26.0 34.0 3 30.436007963111734 31.0 31.0 34.0 26.0 34.0 4 33.919150651426854 37.0 35.0 37.0 30.0 37.0 5 33.89735243011949 37.0 35.0 37.0 30.0 37.0 6 33.990585834732876 37.0 35.0 37.0 30.0 37.0 7 33.86413265458536 37.0 35.0 37.0 30.0 37.0 8 33.83918610793068 37.0 35.0 37.0 30.0 37.0 9 35.2700348737783 39.0 35.0 39.0 30.0 39.0 10-11 35.14179667808942 39.0 35.0 39.0 29.0 39.0 12-13 34.977011009225684 39.0 35.0 39.0 28.0 39.0 14-15 35.99379444203093 40.0 36.0 41.0 27.0 41.0 16-17 35.841967718077655 39.5 36.0 41.0 27.0 41.0 18-19 35.646922385380904 39.0 36.0 41.0 27.0 41.0 20-21 35.518195169111635 39.0 36.0 41.0 27.0 41.0 22-23 35.556752241584334 39.0 36.0 41.0 27.0 41.0 24-25 35.422548678010116 39.0 36.0 41.0 26.0 41.0 26-27 35.15001478247392 39.0 35.0 40.5 25.0 41.0 28-29 34.90880184800348 39.0 35.0 40.0 24.0 41.0 30-31 34.64410547680277 38.5 34.5 40.0 23.5 41.0 32-33 34.367503889190516 38.0 34.0 40.0 21.5 41.0 34-35 33.950695124569975 38.0 33.5 40.0 17.5 41.0 36-37 33.56869081400862 38.0 33.0 40.0 15.5 41.0 38-39 33.327396431924726 38.0 33.0 40.0 14.5 41.0 40-41 33.04266850245301 38.0 32.5 40.0 9.0 41.0 42-43 32.73736607527394 38.0 32.0 40.0 9.0 41.0 44-45 32.413145765373805 37.5 31.0 40.0 8.0 41.0 46-47 32.1186570494182 37.0 31.0 40.0 7.0 41.0 48-49 31.902835006559346 37.0 31.0 40.0 4.0 41.0 50-51 31.152129272366043 36.0 29.5 39.0 2.0 40.0 52-53 31.65432581269112 36.5 31.0 39.0 2.0 40.0 54-55 32.06665897736895 37.0 31.0 40.0 2.0 40.5 56-57 31.897668977340818 37.0 31.0 40.0 2.0 41.0 58-59 31.55036985655977 36.0 31.0 39.0 2.0 41.0 60-61 31.080554435874138 35.5 30.5 39.0 2.0 40.0 62-63 30.575464361913543 35.0 29.5 39.0 2.0 40.0 64-65 30.019852185977587 35.0 29.0 38.0 2.0 40.0 66-67 29.520552260365516 34.5 28.5 37.5 2.0 40.0 68-69 28.994796462012125 34.0 28.0 37.0 2.0 39.0 70-71 28.46983296943129 34.0 26.5 36.0 2.0 39.0 72-73 27.91544378031596 34.0 26.0 36.0 2.0 38.5 74-75 27.321297238108748 33.0 25.5 35.0 2.0 37.5 76-77 26.737485969375964 33.0 24.5 35.0 2.0 37.0 78-79 26.181375194727444 32.0 23.5 35.0 2.0 36.0 80-81 25.609180860721768 32.0 20.5 35.0 2.0 36.0 82-83 24.985406342545353 31.5 18.5 34.0 2.0 35.0 84-85 24.37020378380428 31.0 14.5 34.0 2.0 35.0 86-87 23.745987197989102 31.0 7.0 34.0 2.0 35.0 88-89 23.093919078313085 30.0 2.0 34.0 2.0 35.0 90-91 22.35990729171816 30.0 2.0 34.0 2.0 35.0 92-93 21.53207656182832 29.0 2.0 34.0 2.0 35.0 94-95 20.619025506097117 29.0 2.0 33.5 2.0 35.0 96-97 19.721056592561396 27.0 2.0 33.0 2.0 34.0 98 19.10062517741313 26.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 271174.0 3 45581.0 4 34326.0 5 29000.0 6 26867.0 7 28499.0 8 32045.0 9 36760.0 10 41027.0 11 44238.0 12 48862.0 13 54899.0 14 46818.0 15 46487.0 16 51993.0 17 58317.0 18 65777.0 19 64481.0 20 67721.0 21 73241.0 22 79980.0 23 88417.0 24 98248.0 25 110182.0 26 124346.0 27 141888.0 28 163487.0 29 189791.0 30 225051.0 31 270762.0 32 336938.0 33 434214.0 34 581798.0 35 809654.0 36 1086738.0 37 1094604.0 38 442078.0 39 18632.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.52494976557267 16.575543856324153 12.941597228653329 24.957909149449844 2 16.40819191964409 18.080749948466774 38.40262552729411 27.108432604595023 3 20.854950511373097 21.193493413713984 27.14082778880027 30.81072828611265 4 14.275481668296534 13.914525322970817 33.52277844974008 38.287214558992574 5 16.136874610249883 35.307204860971474 32.21303801601843 16.342882512760212 6 36.75268910606744 31.94321006917774 15.796643232080154 15.507457592674662 7 32.49397381420236 29.640390897289887 18.220256186272064 19.645379102235687 8 28.795471638046184 33.48294421239975 18.02060760560825 19.700976543945817 9 27.183637574543013 16.346308048294347 18.277221841058232 38.192832536104405 10-11 27.525770937549048 24.532082279159816 25.10336745341891 22.83877932987222 12-13 27.324917322213032 21.359007184622484 26.05899880447207 25.257076688692415 14-15 24.330201375192605 23.008627896322153 23.397500547479154 29.263670181006084 16-17 25.072980258737015 26.229396730245924 23.999088404102263 24.698534606914798 18-19 25.113285273949813 25.422914376471756 25.416433751763655 24.047366597814776 20-21 25.520334532901234 24.617119028589993 25.435056208880074 24.4274902296287 22-23 25.319295415928515 24.218894049692924 25.384520278777284 25.07729025560127 24-25 25.08241593802217 24.510130978720557 25.42248913660646 24.984963946650815 26-27 25.037861700664937 24.721211783581573 25.449706367771242 24.79122014798225 28-29 25.017894638540366 24.82550339124937 25.402067069581236 24.75453490062903 30-31 25.175861261263073 24.733880012693525 25.23552886385928 24.854729862184126 32-33 25.007688566876595 24.7825123864655 25.14605596955073 25.06374307710718 34-35 25.114894930580846 24.757793745634928 25.34303375611278 24.784277567671445 36-37 25.171580722563142 24.739500427254015 25.229792691647706 24.859126158535137 38-39 25.14556389376763 24.733957587627017 25.18924687283362 24.93123164577173 40-41 25.289939032215493 24.741053143851595 25.224222549760444 24.744785274172465 42-43 25.191541096889107 24.668356981783347 25.176825428190604 24.963276493136945 44-45 25.08532226709999 24.754416714740373 25.17342054229832 24.98684047586132 46-47 25.249327294356487 24.736351367401642 25.18366594478683 24.830655393455032 48-49 25.268126079714758 24.855912359813807 24.934769407262685 24.941192153208746 50-51 24.998490028023866 25.049643905850736 25.023585526597085 24.928280539528306 52-53 25.18494253023836 25.010698207836224 24.965533238438827 24.838826023486593 54-55 25.092183229938154 24.777500777274415 25.114751977881276 25.015564014906154 56-57 25.090725167674304 24.921022252489198 25.092469267314517 24.89578331252198 58-59 25.174814346436982 24.861190703426107 25.076944972865604 24.887049977271307 60-61 25.234102225120857 24.725356191577127 25.1271966084316 24.913344974870412 62-63 25.073646035855024 24.97452650203401 25.046494058114256 24.905333403996714 64-65 25.09995387573174 24.78831197032528 25.09577116974593 25.01596298419705 66-67 25.122509950227972 24.874229226195784 25.039918139853757 24.96334268372248 68-69 25.053301982117905 24.86712467885981 25.11369327432388 24.965880064698414 70-71 24.96065310197052 24.797766636145784 25.137842023887053 25.103738237996637 72-73 25.182476962630457 24.748489158380213 25.02126668772979 25.047767191259545 74-75 24.95371432531371 25.00079727486741 25.035083458194872 25.010404941624003 76-77 25.157313918795314 24.803230169711895 24.94336308637214 25.096092825120646 78-79 25.076254135009197 24.748757167444598 25.138292309749204 25.036696387796997 80-81 25.050379547229333 24.876932606531128 25.068284051426637 25.0044037948129 82-83 25.132279779059807 24.86083897376882 24.950742720431247 25.056138526740124 84-85 25.14310390736939 24.91101206145647 24.859889827852825 25.08599420332131 86-87 25.12332663459047 24.88083443044842 25.038847259176762 24.956991675784344 88-89 25.00292397700173 24.667363127256998 25.048603967537325 25.28110892820395 90-91 25.062769101749865 24.720233760235892 25.032356802477768 25.184640335536475 92-93 25.136612426274368 24.870552913985776 25.01831366778226 24.974520991957593 94-95 25.234183165512047 24.701179777685127 24.964142111627915 25.100494945174912 96-97 25.1626311760957 24.661671173770376 25.001063080791987 25.174634569341936 98 25.169772633110398 24.782195709459 24.83591258197979 25.21211907545081 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 850.0 1 627.0 2 607.5 3 878.0 4 793.0 5 729.0 6 1203.5 7 2484.0 8 3724.5 9 3710.5 10 2965.5 11 2567.5 12 2764.5 13 3297.5 14 3941.0 15 4465.5 16 4968.0 17 5372.0 18 5505.5 19 5357.5 20 5098.5 21 4754.5 22 4471.0 23 4527.5 24 4794.5 25 5456.0 26 6658.5 27 8567.0 28 11579.0 29 15858.0 30 21323.0 31 28076.0 32 36225.0 33 44698.5 34 55207.0 35 68599.5 36 83628.5 37 100337.5 38 118613.0 39 138249.5 40 158792.0 41 181947.0 42 206262.0 43 229257.0 44 252481.5 45 276862.5 46 302088.5 47 327526.0 48 342853.5 49 347249.0 50 348961.0 51 350928.0 52 357096.5 53 364348.5 54 364308.0 55 352260.0 56 331419.5 57 310075.0 58 286272.5 59 255813.5 60 224265.5 61 190069.0 62 153682.5 63 117873.0 64 86950.0 65 65973.5 66 50812.5 67 38199.5 68 28628.5 69 22037.5 70 16901.0 71 12822.5 72 9921.0 73 7620.5 74 5834.0 75 4359.5 76 2959.0 77 1876.0 78 1182.0 79 725.5 80 439.5 81 270.0 82 155.0 83 93.0 84 58.0 85 44.0 86 40.5 87 31.5 88 27.5 89 29.5 90 23.5 91 12.5 92 8.5 93 8.5 94 9.5 95 10.0 96 7.0 97 5.0 98 4.5 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4789467966238357 2 0.049766099333134264 3 0.05919687562668111 4 0.05606221418820106 5 0.06715409312436126 6 0.06707371719004127 7 0.04446128766801417 8 0.02089774292320039 9 0.012619021688240237 10-11 0.015211145570060288 12-13 0.011446872646073549 14-15 0.015626421230713627 16-17 0.014568138095500276 18-19 0.0565377717995944 20-21 0.0857611219194416 22-23 0.10237214834557526 24-25 0.07167523942986134 26-27 0.08742892255658165 28-29 0.08950530085984836 30-31 0.059257157577421116 32-33 0.034052604173573975 34-35 0.40447179548182766 36-37 0.6323241732899786 38-39 0.5795908623815309 40-41 0.5745070845357908 42-43 0.5473802067027903 44-45 0.5316935035213367 46-47 0.5216264177477564 48-49 0.5116062179358629 50-51 0.5262815239437899 52-53 0.6089012864302248 54-55 0.5780838136130309 56-57 0.53431911737579 58-59 0.5115258420015429 60-61 0.5252835227593166 62-63 0.5364758716133767 64-65 0.5558933577461839 66-67 0.5824977920061043 68-69 0.5359668240293501 70-71 0.4839568965297824 72-73 0.46716502425142875 74-75 0.4468366108629951 76-77 0.46183342060820204 78-79 0.45563107767650857 80-81 0.45318630967427515 82-83 0.47299227948962885 84-85 0.4385043056718216 86-87 0.44112322153174827 88-89 0.4684845291731822 90-91 0.4516725629112485 92-93 0.4462605833337017 94-95 0.4581294296349553 96-97 0.45129747521775515 98 0.44694377877542174 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 7464921.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.88970704151026 #Duplication Level Percentage of deduplicated Percentage of total 1 70.085616907618 31.46122810806491 2 14.110341736575686 12.668182136209555 3 5.978993968126986 8.05185862896532 4 2.9034499178121878 5.213400648811446 5 1.741229268289797 3.9081635872816136 6 1.0693450471020667 2.880155153442106 7 0.7448274747465709 2.3404560996489012 8 0.543107640517925 1.9503954299884416 9 0.4059555131475015 1.6400901651369582 >10 2.1712322848663597 17.696323211352365 >50 0.16489006580226803 5.066180942026885 >100 0.07846182450729022 6.077463563024729 >500 0.0021286677408208906 0.6263862228114505 >1k 3.897057799799737E-4 0.3185616980318732 >5k 2.997736662293983E-5 0.1011544052034273 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7517 0.10069764971390857 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.679197810666717E-5 2 0.0 0.0 0.0 0.0 2.679197810666717E-5 3 0.0 0.0 0.0 0.0 2.679197810666717E-5 4 0.0 0.0 0.0 0.0 2.679197810666717E-5 5 0.0 0.0 0.0 0.0 2.679197810666717E-5 6 0.0 0.0 0.0 0.0 5.358395621333434E-5 7 0.0 0.0 0.0 0.0 5.358395621333434E-5 8 0.0 0.0 0.0 0.0 5.358395621333434E-5 9 0.0 0.0 0.0 0.0 5.358395621333434E-5 10-11 0.0 0.0 0.0 0.0 5.358395621333434E-5 12-13 0.0 0.0 0.0 0.0 1.0046991790000189E-4 14-15 0.0 2.0093983580000377E-5 0.0 0.0 1.2056390148000226E-4 16-17 0.0 2.679197810666717E-5 0.0 6.697994526666793E-6 1.3395989053333586E-4 18-19 0.0 2.679197810666717E-5 0.0 2.679197810666717E-5 1.4735587958666942E-4 20-21 0.0 2.679197810666717E-5 0.0 2.679197810666717E-5 1.540538741133362E-4 22-23 0.0 2.679197810666717E-5 0.0 4.0187967160000755E-5 1.6075186864000302E-4 24-25 0.0 2.679197810666717E-5 0.0 7.367793979333471E-5 1.741478576933366E-4 26-27 1.3395989053333585E-5 2.679197810666717E-5 0.0 1.6744986316666983E-4 1.9424184127333696E-4 28-29 1.3395989053333585E-5 2.679197810666717E-5 0.0 5.961215128733445E-4 2.1433582485333737E-4 30-31 1.3395989053333585E-5 3.3489972633333964E-5 0.0 0.0023041101171733767 2.2103381938000415E-4 32-33 1.3395989053333585E-5 4.688596168666755E-5 0.0 0.0054454695501801025 2.2773181390667096E-4 34-35 2.679197810666717E-5 5.358395621333434E-5 0.0 0.009276722419433508 2.4112780296000453E-4 36-37 2.679197810666717E-5 6.028195074000113E-5 0.0 0.015425481394913624 2.4782579748667134E-4 38-39 2.679197810666717E-5 8.70739288466683E-5 0.0 0.024675411836240464 2.545237920133381E-4 40-41 2.679197810666717E-5 1.0716791242666868E-4 0.0 0.034863061511300655 2.545237920133381E-4 42-43 2.679197810666717E-5 1.2726189600666907E-4 0.0 0.04450147563517417 2.612217865400049E-4 44-45 2.679197810666717E-5 1.3395989053333586E-4 0.0 0.05575410643997438 2.813157701200053E-4 46-47 2.679197810666717E-5 1.741478576933366E-4 0.0 0.06716748911341461 3.081077482266724E-4 48-49 4.0187967160000755E-5 1.875438467466702E-4 0.0 0.07862775774854147 3.5499370991334E-4 50-51 4.0187967160000755E-5 2.0093983580000377E-4 0.0 0.0904028321264217 3.616917044400068E-4 52-53 4.0187967160000755E-5 2.0093983580000377E-4 0.0 0.10214441653166859 3.88483682546674E-4 54-55 4.0187967160000755E-5 2.0093983580000377E-4 0.0 0.11390609492049547 3.88483682546674E-4 56-57 4.0187967160000755E-5 2.0763783032667058E-4 0.0 0.12689350630770238 3.88483682546674E-4 58-59 4.0187967160000755E-5 2.1433582485333737E-4 0.0 0.13986752170585595 4.0187967160000755E-4 60-61 4.0187967160000755E-5 2.2773181390667096E-4 0.0 0.1526071072955762 4.1527566065334117E-4 62-63 4.688596168666755E-5 2.2773181390667096E-4 0.0 0.1657150825842631 4.1527566065334117E-4 64-65 5.358395621333434E-5 2.2773181390667096E-4 0.0 0.17869579597694335 4.1527566065334117E-4 66-67 5.358395621333434E-5 2.4112780296000453E-4 0.0 0.19312327618738362 4.21973655180008E-4 68-69 5.358395621333434E-5 2.4112780296000453E-4 0.0 0.20807989796543058 4.2867164970667473E-4 70-71 6.028195074000113E-5 2.4782579748667134E-4 0.0 0.22371301719067088 4.420676387600083E-4 72-73 6.697994526666793E-5 2.545237920133381E-4 0.0 0.23925236449253784 4.755576113933423E-4 74-75 6.697994526666793E-5 2.679197810666717E-4 0.0 0.25453718800239145 4.956515949733427E-4 76-77 6.697994526666793E-5 2.679197810666717E-4 0.0 0.27140273822053845 5.224435730800098E-4 78-79 6.697994526666793E-5 2.679197810666717E-4 6.697994526666793E-6 0.2884089463237454 5.492355511866769E-4 80-81 6.697994526666793E-5 2.7461777559333847E-4 2.0093983580000377E-5 0.3061251418467791 5.760275292933442E-4 82-83 6.697994526666793E-5 2.9471175917333885E-4 3.3489972633333964E-5 0.32402888121655943 6.296114855066785E-4 84-85 6.697994526666793E-5 3.148057427533392E-4 4.0187967160000755E-5 0.3418455466574931 6.296114855066785E-4 86 6.697994526666793E-5 3.2150373728000604E-4 4.0187967160000755E-5 0.35519464974914 6.296114855066785E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 13675 0.0 36.387592 1 GGTATCA 8805 0.0 29.851192 1 TCAACGC 17265 0.0 28.514917 4 TATCAAC 17785 0.0 27.861797 2 CAACGCA 17710 0.0 27.824305 5 ATCAACG 17930 0.0 27.45752 3 AACGCAG 18580 0.0 26.589216 6 GTACATG 25070 0.0 25.430237 1 TACATGG 25880 0.0 24.23032 2 ACATGGG 26090 0.0 23.086527 3 ACGCAGA 22310 0.0 21.954636 7 GAGTACA 18705 0.0 21.213118 1 CGCAGAG 23325 0.0 20.956049 8 GTACCTG 7030 0.0 20.887686 1 CATGGGG 20780 0.0 20.448835 4 AGTACAT 17880 0.0 20.432812 2 TACCTGG 7100 0.0 19.885187 2 GCAGAGT 26435 0.0 18.213236 9 GTATAGG 1500 0.0 18.105717 1 AGAGTAC 20490 0.0 18.031384 10-11 >>END_MODULE