##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921475_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7464921 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.885161946121062 33.0 31.0 34.0 30.0 34.0 2 32.004510965353816 34.0 31.0 34.0 30.0 34.0 3 32.12803283517669 34.0 31.0 34.0 30.0 34.0 4 35.66553751874936 37.0 35.0 37.0 35.0 37.0 5 35.45429764092614 37.0 35.0 37.0 33.0 37.0 6 35.48980183447353 37.0 35.0 37.0 33.0 37.0 7 35.414799969082054 37.0 35.0 37.0 33.0 37.0 8 35.365800656162335 37.0 35.0 37.0 33.0 37.0 9 36.979555979226035 39.0 37.0 39.0 33.0 39.0 10-11 36.88953185171015 39.0 37.0 39.0 33.0 39.0 12-13 36.76524674541097 39.0 37.0 39.0 33.0 39.0 14-15 38.05360867181314 40.0 38.0 41.0 33.0 41.0 16-17 37.947658186871635 40.0 38.0 41.0 33.0 41.0 18-19 37.83393548304128 40.0 38.0 41.0 33.0 41.0 20-21 37.71380119093022 40.0 38.0 41.0 32.0 41.0 22-23 37.67795158180508 40.0 38.0 41.0 32.5 41.0 24-25 37.72796691351456 40.0 38.0 41.0 32.5 41.0 26-27 37.61329771607764 40.0 38.0 41.0 32.0 41.0 28-29 37.4754556009367 40.0 38.0 41.0 32.0 41.0 30-31 37.329847295101985 40.0 37.0 41.0 32.0 41.0 32-33 37.1654831310338 40.0 37.0 41.0 31.0 41.0 34-35 37.01219128775777 40.0 37.0 41.0 31.0 41.0 36-37 36.91158452982958 40.0 37.0 41.0 31.0 41.0 38-39 36.87556251432534 40.0 37.0 41.0 31.0 41.0 40-41 36.70383671843279 40.0 36.0 41.0 30.0 41.0 42-43 36.451175973597046 39.0 36.0 41.0 30.0 41.0 44-45 36.23554783767973 39.0 35.5 41.0 30.0 41.0 46-47 35.94933295342308 39.0 35.0 40.0 29.0 41.0 48-49 35.602651320757445 39.0 35.0 40.0 28.0 41.0 50-51 35.303385126245814 38.0 35.0 40.0 27.0 41.0 52-53 34.97152930352512 38.0 34.0 40.0 26.5 41.0 54-55 34.619953513238784 38.0 34.0 40.0 26.0 41.0 56-57 34.21233031133217 37.5 33.5 40.0 25.0 41.0 58-59 33.7904139909853 37.0 33.0 39.5 24.0 41.0 60-61 33.33856332839959 36.0 32.5 39.0 23.0 40.5 62-63 32.872098914375655 36.0 32.0 39.0 22.0 40.0 64-65 32.330197868135514 35.0 31.0 38.5 20.5 40.0 66-67 31.780195731475256 35.0 31.0 38.0 18.5 40.0 68-69 31.252485860198654 35.0 30.5 37.0 17.5 39.0 70-71 30.68801746193965 34.0 30.0 36.5 12.5 39.0 72-73 30.127895191389165 34.0 29.0 36.0 8.0 38.5 74-75 29.601761693124416 34.0 29.0 35.0 7.0 37.5 76-77 28.379588544875425 32.0 27.0 34.5 6.5 36.0 78-79 29.30711597617711 33.5 29.0 35.0 6.5 36.0 80-81 29.33629625819215 34.0 29.0 35.0 2.0 36.0 82-83 28.995307251074728 34.0 29.0 35.0 2.0 36.0 84-85 28.49776220002864 33.5 29.0 35.0 2.0 35.0 86-87 27.9641584284683 33.0 27.0 35.0 2.0 35.0 88-89 27.408524618010023 33.0 26.5 35.0 2.0 35.0 90-91 26.90983997017517 32.5 25.0 34.5 2.0 35.0 92-93 26.444412271744067 32.0 25.0 34.0 2.0 35.0 94-95 25.91350598351945 32.0 24.0 34.0 2.0 35.0 96-97 25.105024956057807 32.0 20.5 34.0 2.0 35.0 98-99 24.05452656498307 31.0 8.5 34.0 2.0 35.0 100-101 20.494351112356043 27.0 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 54210.0 3 27960.0 4 16908.0 5 12508.0 6 11035.0 7 11571.0 8 13515.0 9 15846.0 10 18852.0 11 21890.0 12 25805.0 13 29616.0 14 33485.0 15 37687.0 16 42571.0 17 48484.0 18 50366.0 19 46747.0 20 47381.0 21 49860.0 22 53557.0 23 58634.0 24 66533.0 25 77123.0 26 91363.0 27 110014.0 28 133431.0 29 161026.0 30 196140.0 31 244530.0 32 311303.0 33 415058.0 34 585137.0 35 871156.0 36 1325014.0 37 1537982.0 38 594396.0 39 16227.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.67723590171407 17.068047827096574 13.299841751739441 24.954874519449916 2 16.50419341343331 18.331620656132866 38.018942196441195 27.14524373399263 3 20.85497192771257 21.31959913076318 27.3567920815371 30.468636859987146 4 14.483989299793832 14.229003553018552 33.43762151633079 37.84938563085683 5 16.1750208609822 35.301537476826525 32.23742121956738 16.286020442623894 6 36.806572153599575 32.04210394810973 15.677683301647422 15.473640596643282 7 32.55825831594721 29.61737480013722 18.230488318710133 19.593878565205436 8 28.834233166776315 33.54534465931799 17.95856305212633 19.661859121779365 9 27.09083356596625 16.341235343791222 18.25763444908638 38.31029664115616 10-11 27.522725115140762 24.564129127139967 25.118982363229613 22.794163394489654 12-13 27.318009653589726 21.32829881544239 26.121397628471215 25.232293902496668 14-15 24.270933091838582 23.00689250635053 23.46843487580466 29.25373952600623 16-17 25.028819838903715 26.245467638528698 24.116126278634322 24.60958624393326 18-19 25.05692620917312 25.45138096688286 25.47812286734014 24.013569956603877 20-21 25.450448790573553 24.59350233523855 25.575501803269134 24.38054707091876 22-23 25.24103290194682 24.167363270956677 25.56141168492691 25.030192142169593 24-25 25.006184339136027 24.47167787083991 25.56767945102901 24.954458338995053 26-27 24.91462974108754 24.70114044965198 25.61557966023937 24.768650149021113 28-29 24.945005154960683 24.81644099156133 25.54579306100554 24.692760792472452 30-31 25.084841036047617 24.706171872650398 25.387197642556213 24.821789448745765 32-33 24.907406954648177 24.703924305365444 25.34050923713298 25.0481595028534 34-35 25.03315105278205 24.725286355699208 25.520523107402443 24.721039484116297 36-37 25.009284401722798 24.74096787141492 25.416364555182035 24.833383171680243 38-39 25.044463313453885 24.73285669545586 25.38341548051496 24.839264510575298 40-41 25.163043518311273 24.70552547514568 25.376089237355814 24.75534176918723 42-43 25.122880589893814 24.70933225340104 25.293792467994713 24.873994688710432 44-45 24.95641503962321 24.693729613877945 25.3508015713831 24.99905377511574 46-47 25.062110463399694 24.746578656940073 25.378466322605664 24.812844557054564 48-49 25.133452431053012 24.837259871862894 25.138342086598207 24.890945610485886 50-51 24.920576654881888 25.052488937534413 25.15229562069709 24.874638786886607 52-53 25.150174041199342 24.943871235970153 25.061644684812517 24.844310038017987 54-55 25.053073578795594 24.75731237835142 25.13048524663691 25.05912879621608 56-57 25.034181052002086 24.950473310111025 25.16133349373354 24.854012144153344 58-59 25.139619414813154 24.844281794675886 25.119545324877073 24.89655346563389 60-61 25.16782558236661 24.78049326812084 25.19545629220256 24.856224857309993 62-63 25.004342597116246 24.961429095956692 25.126745889839853 24.90748241708721 64-65 25.082114457925346 24.814063126199144 25.127094458738537 24.976727957136973 66-67 25.078800275232254 24.88429638378081 25.066035706084705 24.970867634902234 68-69 25.012695386131085 24.897714763475758 25.16103218499039 24.92855766540277 70-71 24.982362027917972 24.78117660614067 25.202116556649845 25.034344809291518 72-73 25.193287580643975 24.799710824064316 24.999768846854007 25.00723274843771 74-75 24.926242804966776 25.02471975951653 25.02438468991956 25.024652745597137 76-77 25.059262593553065 24.832585356677374 25.055654837886138 25.052497211883423 78-79 25.004948487800444 24.790734098194488 25.225389961953116 24.978927452051952 80-81 24.93060742182828 24.96384054879685 25.149403341416708 24.95614868795816 82-83 25.062492889779758 24.92150785845995 25.034534398324286 24.981464853436 84-85 25.02443394607844 25.008402570942184 24.978282611638967 24.98888087134041 86-87 24.98237506177027 24.98836348366284 25.126526368604203 24.90273508596269 88-89 24.880497115837702 24.796052226682647 25.13445799928975 25.188992658189903 90-91 24.96725462362032 24.850316910859206 25.108799153777657 25.073629311742824 92-93 25.047287278947973 25.022305067381605 25.101413170262752 24.82899448340767 94-95 25.06773057282196 24.88494761912258 25.00010885121111 25.047212956844344 96-97 24.98784248685783 24.825159554800578 25.129572966513585 25.057424991828007 98-99 24.977957993112952 24.897526941086582 25.066420762585786 25.058094303214684 100-101 25.552806938572093 24.285035823566922 25.132509686028005 25.02964755183298 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 242.0 1 206.5 2 339.5 3 564.5 4 463.0 5 368.5 6 828.0 7 2051.0 8 3174.0 9 3065.0 10 2187.5 11 1539.5 12 1385.0 13 1433.5 14 1559.0 15 1693.5 16 1852.0 17 2006.5 18 2147.5 19 2312.0 20 2495.0 21 2761.0 22 3000.5 23 3311.5 24 3695.5 25 4434.5 26 5484.0 27 7044.5 28 9497.0 29 12922.5 30 17708.5 31 23403.0 32 30355.5 33 38467.0 34 47001.5 35 57598.0 36 71659.5 37 87714.0 38 104343.0 39 122229.0 40 142538.5 41 163500.5 42 185596.5 43 209381.5 44 233795.5 45 258726.0 46 279641.5 47 301737.0 48 328545.0 49 343379.5 50 344411.0 51 346732.0 52 353547.5 53 359387.5 54 360354.5 55 351894.0 56 330905.5 57 305036.0 58 282491.5 59 255609.5 60 222811.0 61 190422.0 62 155517.5 63 118253.0 64 86681.0 65 65116.0 66 49874.0 67 38266.0 68 28785.0 69 21756.5 70 17026.5 71 13141.0 72 9831.0 73 7630.5 74 5926.5 75 4432.5 76 3187.0 77 1986.5 78 1171.5 79 658.0 80 369.5 81 199.0 82 106.5 83 61.5 84 29.5 85 16.5 86 11.5 87 7.5 88 5.5 89 1.5 90 1.0 91 2.5 92 2.0 93 0.5 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.31412254731161926 2 0.0 3 0.0059210271615734444 4 0.060335534696214464 5 3.750876934933404E-4 6 0.06320227635362785 7 0.0727134285814947 8 0.10201045664113524 9 0.09134724935468172 10-11 0.09501775035529511 12-13 0.09475652856875512 14-15 0.06319557835910118 16-17 0.035010417390887325 18-19 0.03815847481842072 20-21 0.02794403316525386 22-23 0.04190935175335412 24-25 0.03379808038156063 26-27 0.020750387043613722 28-29 0.02306119515531377 30-31 0.0030207955315267234 32-33 0.005391885593966768 34-35 0.008077781399160152 36-37 0.0105694353630802 38-39 0.0158541530446203 40-41 0.02008728558547371 42-43 0.003422675203126731 44-45 0.014072486500526933 46-47 0.024199854224847123 48-49 0.0024447680022333792 50-51 0.00657743062518679 52-53 0.0022170361883267083 54-55 0.003804460891146738 56-57 0.003469561164813399 58-59 9.98001184473352E-4 60-61 0.0053650936158601 62-63 0.01432701029254027 64-65 0.006597524608766791 66-67 0.03830583069800739 68-69 0.060730716373287814 70-71 0.012203746027586896 72-73 0.031293030428587255 74-75 0.05069712057234095 76-77 0.303030668375459 78-79 0.07463575301064808 80-81 0.03332252277016729 82-83 0.02775648931850719 84-85 0.01917635832984703 86-87 0.11877553694138224 88-89 0.5273732970516366 90-91 0.12953921414573577 92-93 0.04838631246064091 94-95 0.008084479393686818 96-97 0.005371791610386768 98-99 0.010234535636746858 100-101 0.007515149858920142 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 7464921.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.677928251277855 #Duplication Level Percentage of deduplicated Percentage of total 1 64.41625083662913 25.55903378912088 2 16.52369837268283 13.11252236954132 3 6.891181700243178 8.202834392063032 4 3.572276501089275 5.669621228157845 5 2.105199663732922 4.1764980606104585 6 1.3558373251726918 3.2278089665163927 7 0.9497815423814766 2.6379754725100173 8 0.6707512785837716 2.129121688487982 9 0.5149766377837831 1.8389885476562327 >10 2.690895197610601 19.460619873049367 >50 0.2017949885803852 5.5285657211387385 >100 0.1036324036063875 7.143639316219384 >500 0.0031819944753023934 0.8324493852943273 >1k 5.077100897603017E-4 0.3776360008739235 >5k 3.384733847048501E-5 0.10268518875994637 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7646 0.10242573230178859 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.3395989053333585E-5 0.0 3 0.0 1.3395989053333585E-5 0.0 1.3395989053333585E-5 0.0 4 0.0 1.3395989053333585E-5 0.0 1.3395989053333585E-5 0.0 5 0.0 1.3395989053333585E-5 0.0 1.3395989053333585E-5 0.0 6 0.0 1.3395989053333585E-5 0.0 1.3395989053333585E-5 1.3395989053333585E-5 7 0.0 1.3395989053333585E-5 0.0 1.3395989053333585E-5 1.3395989053333585E-5 8 0.0 1.3395989053333585E-5 0.0 1.3395989053333585E-5 1.3395989053333585E-5 9 0.0 1.3395989053333585E-5 0.0 1.3395989053333585E-5 1.3395989053333585E-5 10-11 0.0 1.3395989053333585E-5 0.0 1.3395989053333585E-5 1.3395989053333585E-5 12-13 0.0 2.0093983580000377E-5 0.0 1.3395989053333585E-5 6.697994526666793E-5 14-15 0.0 7.367793979333471E-5 0.0 1.3395989053333585E-5 8.707392884666829E-5 16-17 0.0 1.2056390148000226E-4 0.0 2.0093983580000377E-5 1.0046991790000189E-4 18-19 0.0 1.2056390148000226E-4 0.0 4.0187967160000755E-5 1.0716791242666868E-4 20-21 0.0 1.2056390148000226E-4 0.0 5.358395621333434E-5 1.2726189600666907E-4 22-23 0.0 1.2056390148000226E-4 0.0 6.697994526666793E-5 1.4065788506000264E-4 24-25 0.0 1.2056390148000226E-4 0.0 1.0046991790000189E-4 1.540538741133362E-4 26-27 0.0 1.2056390148000226E-4 0.0 2.0093983580000377E-4 1.94241841273337E-4 28-29 0.0 1.2056390148000226E-4 0.0 6.430074745600121E-4 2.1433582485333737E-4 30-31 0.0 1.3395989053333586E-4 0.0 0.0022773181390667095 2.1433582485333737E-4 32-33 0.0 1.4065788506000264E-4 0.0 0.0053583956213334345 2.2773181390667096E-4 34-35 0.0 1.808458522200034E-4 0.0 0.009089178572686837 2.2773181390667096E-4 36-37 0.0 2.2103381938000415E-4 0.0 0.015124071641213618 2.2773181390667096E-4 38-39 0.0 2.7461777559333847E-4 0.0 0.024300324142747125 2.4112780296000453E-4 40-41 0.0 2.9471175917333885E-4 0.0 0.034360711921800645 2.4112780296000453E-4 42-43 0.0 3.0810774822667247E-4 0.0 0.043771394231767485 2.4782579748667134E-4 44-45 0.0 3.0810774822667247E-4 0.0 0.054849877178874365 2.813157701200053E-4 46-47 0.0 3.2820173180667285E-4 0.0 0.06612929996178124 3.2150373728000604E-4 48-49 0.0 3.482957153866732E-4 0.0 0.07723457488699478 3.482957153866732E-4 50-51 0.0 3.482957153866732E-4 0.0 0.08878191745096833 3.616917044400068E-4 52-53 0.0 3.482957153866732E-4 0.0 0.10032926001494188 4.1527566065334117E-4 54-55 0.0 3.683896989666736E-4 0.0 0.11185650859533544 4.420676387600083E-4 56-57 0.0 3.8178568802000717E-4 0.0 0.12446213429452234 4.487656332866751E-4 58-59 0.0 3.88483682546674E-4 0.0 0.13707445798823592 4.554636278133419E-4 60-61 0.0 3.88483682546674E-4 0.0 0.1494657478625695 4.554636278133419E-4 62-63 0.0 3.88483682546674E-4 0.0 0.1618838297150097 5.15745578553343E-4 64-65 0.0 3.88483682546674E-4 0.0 0.17442247546892994 5.224435730800098E-4 66-67 0.0 4.1527566065334117E-4 0.0 0.18821364619933686 5.224435730800098E-4 68-69 0.0 4.1527566065334117E-4 0.0 0.20281527426747048 5.224435730800098E-4 70-71 0.0 4.1527566065334117E-4 0.0 0.21778529203457075 5.224435730800098E-4 72-73 0.0 4.1527566065334117E-4 0.0 0.2325811619439777 5.626315402400106E-4 74-75 0.0 4.1527566065334117E-4 0.0 0.2472430719628513 5.760275292933442E-4 76-77 0.0 4.1527566065334117E-4 0.0 0.2633718427830649 5.894235183466778E-4 78-79 0.0 4.1527566065334117E-4 0.0 0.2798288153350853 6.028195074000113E-4 80-81 0.0 4.1527566065334117E-4 0.0 0.29672785552586556 6.296114855066785E-4 82-83 0.0 4.2867164970667473E-4 0.0 0.31362019772211924 6.564034636133457E-4 84-85 0.0 4.554636278133419E-4 0.0 0.3306531978034329 6.631014581400124E-4 86-87 0.0 4.554636278133419E-4 0.0 0.34822873544140653 6.697994526666792E-4 88-89 0.0 4.554636278133419E-4 0.0 0.3675457516563136 6.697994526666792E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 14140 0.0 36.75037 1 GGTATCA 9015 0.0 31.700924 1 TCAACGC 17340 0.0 29.308043 4 CAACGCA 17525 0.0 28.928535 5 TATCAAC 18365 0.0 27.954885 2 ATCAACG 18490 0.0 27.510523 3 AACGCAG 19005 0.0 26.776558 6 GTACATG 24645 0.0 25.723831 1 TACATGG 25870 0.0 24.01233 2 GTACCTG 6875 0.0 22.585583 1 ACGCAGA 22455 0.0 22.558247 7 ACATGGG 26085 0.0 22.504736 3 GAGTACA 18765 0.0 22.209864 1 AGTACAT 18050 0.0 21.207075 2 CGCAGAG 24020 0.0 21.029196 8 CATGGGG 20560 0.0 19.40476 4 TACCTGG 7955 0.0 18.746164 2 GCAGAGT 27250 0.0 18.257448 9 AGAGTAC 21070 0.0 18.227224 10-11 GTGTACG 1310 0.0 17.81604 1 >>END_MODULE