##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921473_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2227565 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.190679059870305 31.0 31.0 34.0 27.0 34.0 2 30.274889846087543 31.0 31.0 34.0 26.0 34.0 3 30.40963563352809 31.0 31.0 34.0 26.0 34.0 4 33.91093548336412 37.0 35.0 37.0 30.0 37.0 5 33.88819405943261 37.0 35.0 37.0 30.0 37.0 6 33.984437715622214 37.0 35.0 37.0 30.0 37.0 7 33.86842493933959 37.0 35.0 37.0 30.0 37.0 8 33.847192337821795 37.0 35.0 37.0 30.0 37.0 9 35.27664333027319 39.0 35.0 39.0 30.0 39.0 10-11 35.14505390415094 39.0 35.0 39.0 29.0 39.0 12-13 34.96885253628963 39.0 35.0 39.0 28.0 39.0 14-15 35.95354164749401 40.0 36.0 41.0 27.0 41.0 16-17 35.793963139122766 39.0 36.0 41.0 27.0 41.0 18-19 35.60197188409766 39.0 36.0 41.0 27.0 41.0 20-21 35.47809087501375 39.0 36.0 40.0 27.0 41.0 22-23 35.5153369261952 39.0 36.0 41.0 27.0 41.0 24-25 35.3692291807422 39.0 36.0 41.0 26.0 41.0 26-27 35.078986696235575 39.0 35.0 40.0 24.5 41.0 28-29 34.83038654315362 39.0 35.0 40.0 24.0 41.0 30-31 34.5570001324316 38.5 34.0 40.0 23.5 41.0 32-33 34.258293023997055 38.0 34.0 40.0 21.5 41.0 34-35 33.81550235346668 38.0 33.5 40.0 17.5 41.0 36-37 33.413397364386675 38.0 33.0 40.0 15.0 41.0 38-39 33.159005685580446 38.0 33.0 40.0 12.5 41.0 40-41 32.870952811702466 38.0 32.0 40.0 9.0 41.0 42-43 32.560563889269226 38.0 31.5 40.0 8.5 41.0 44-45 32.21427702446393 37.0 31.0 40.0 8.0 41.0 46-47 31.898816869541406 37.0 31.0 40.0 6.5 41.0 48-49 31.657872834238283 37.0 30.0 40.0 2.0 41.0 50-51 30.923146574847422 36.0 29.5 38.5 2.0 40.0 52-53 31.463084354440838 36.5 30.5 39.0 2.0 40.0 54-55 31.882776035716127 37.0 31.0 39.5 2.0 40.5 56-57 31.722292952169745 36.5 31.0 40.0 2.0 41.0 58-59 31.376106645597325 36.0 31.0 39.0 2.0 41.0 60-61 30.911299333577247 35.5 30.0 39.0 2.0 40.0 62-63 30.406147070904776 35.0 29.0 39.0 2.0 40.0 64-65 29.84206521470754 35.0 28.5 38.0 2.0 40.0 66-67 29.33689275060436 34.5 28.0 37.5 2.0 40.0 68-69 28.801881875500825 34.0 27.5 37.0 2.0 39.0 70-71 28.273500436575365 34.0 26.0 36.0 2.0 39.0 72-73 27.701998370417922 33.5 26.0 36.0 2.0 39.0 74-75 27.08774715889323 33.0 25.0 35.0 2.0 37.5 76-77 26.489671232938207 33.0 23.5 35.0 2.0 37.0 78-79 25.90996469238833 32.0 21.5 35.0 2.0 36.5 80-81 25.310512151160573 32.0 19.0 35.0 2.0 36.0 82-83 24.660937391277024 31.0 16.5 34.0 2.0 35.5 84-85 24.017928545294975 31.0 8.5 34.0 2.0 35.0 86-87 23.370115574629697 30.5 3.5 34.0 2.0 35.0 88-89 22.696494827311437 30.0 2.0 34.0 2.0 35.0 90-91 21.927660472309448 29.0 2.0 34.0 2.0 35.0 92-93 21.078196371374123 29.0 2.0 34.0 2.0 35.0 94-95 20.147118714829872 28.0 2.0 33.5 2.0 34.5 96-97 19.245934237609227 26.5 2.0 33.0 2.0 34.0 98 18.629265139288865 25.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 79286.0 3 13362.0 4 10091.0 5 8610.0 6 8132.0 7 8604.0 8 9784.0 9 11372.0 10 12638.0 11 13842.0 12 15037.0 13 17171.0 14 14859.0 15 14769.0 16 16773.0 17 19146.0 18 21323.0 19 20888.0 20 21574.0 21 23088.0 22 25280.0 23 27796.0 24 31227.0 25 34445.0 26 39016.0 27 44492.0 28 50602.0 29 58919.0 30 69305.0 31 83306.0 32 102792.0 33 131684.0 34 174228.0 35 237220.0 36 309831.0 37 310599.0 38 130571.0 39 5903.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.27857744424802 16.40389619938768 12.08533638393975 25.23218997242455 2 16.547801431053895 18.651264714429246 38.386666612769716 26.41426724174714 3 21.079747634862898 22.097401156538794 27.084469374719827 29.738381833878485 4 14.06771659838652 14.172191736582512 34.2208629574549 37.539228707576065 5 15.570656958963871 35.245330923178095 32.56571027107059 16.618301846787435 6 35.32205783529124 32.65529713626547 16.606758470997903 15.415886557445384 7 31.83035261169061 29.72363765706387 18.919341322044588 19.52666840920094 8 28.387437441797186 33.271265298864996 18.660461958595967 19.680835300741855 9 27.057491917296694 16.661211599582813 18.598635918945337 37.68266056417516 10-11 27.06984170243794 24.565631875834978 25.711180639444652 22.65334578228243 12-13 27.23263412012591 21.58571785824444 26.433779176972433 24.747868844657216 14-15 24.038459379867305 23.150384355835246 23.95407216038915 28.857084103908303 16-17 24.60322751910706 26.429266551502355 24.468756910139287 24.4987490192513 18-19 24.592335709213472 25.472769305467157 26.195212636705932 23.739682348613435 20-21 24.923055772518694 24.807838797771858 26.134395243419167 24.13471018629028 22-23 24.65298100110159 24.58822913532893 26.01649981789942 24.742290045670064 24-25 24.432462275146214 24.80958166251925 26.19876909489775 24.559186967436787 26-27 24.547537181631647 24.935628815826302 26.156558447597522 24.36027555494453 28-29 24.516495570950937 25.167817725945973 26.00263242610707 24.313054276996017 30-31 24.636847268336854 25.08147916576833 25.93833545340865 24.343338112486165 32-33 24.395433307878996 25.047696008309444 25.934907999524892 24.621962684286665 34-35 24.56115995124801 25.0849418726246 26.062550933571803 24.291347242555585 36-37 24.62468323576837 25.103607712488994 25.904435580241593 24.367273471501047 38-39 24.628809582889012 25.040454398799206 25.921453779932136 24.40928223837965 40-41 24.681827048290586 25.010136922963 25.99621795693817 24.311818071808247 42-43 24.646306104512195 24.943810283474242 25.876972621309523 24.53291099070404 44-45 24.561894441237413 25.11871400272339 25.849480438649426 24.469911117389767 46-47 24.754663591828812 25.103719365385963 25.768141580939012 24.373475461846212 48-49 24.743413611459765 25.210118920167783 25.56811810475904 24.47834936361341 50-51 24.561376588473294 25.39740744459877 25.532552490277073 24.508663476650867 52-53 24.638213032777294 25.391123792368454 25.540201839163736 24.430461335690516 54-55 24.57073240777283 25.153279213360875 25.65278566738885 24.62320271147745 56-57 24.6256626745025 25.341309386817755 25.582220384703835 24.450807553975913 58-59 24.62377340959811 25.233754720953012 25.661384674498766 24.481087194950117 60-61 24.69457012808863 25.129385015280235 25.658681709139103 24.517363147492034 62-63 24.511415335500033 25.294216017872213 25.698457666452345 24.495910980175413 64-65 24.59382951775995 25.12258417808051 25.727113839241877 24.556472464917665 66-67 24.54960487694739 25.293429668096636 25.615037254459246 24.541928200496727 68-69 24.54676349914918 25.317285861946008 25.58785561789385 24.548095021010962 70-71 24.505099622927677 25.042433888284005 25.773841867817392 24.678624620970922 72-73 24.667486809864723 25.16388017189179 25.497605535177264 24.671027483066226 74-75 24.473315620107215 25.374737548431785 25.571486035051265 24.580460796409735 76-77 24.643341744040438 25.13170247249532 25.56589611239513 24.659059671069112 78-79 24.575805483077882 25.04925362465412 25.673715397595192 24.70122549467281 80-81 24.468247264514655 25.308837118268844 25.53139195763025 24.691523659586252 82-83 24.690440304026268 25.23277729902329 25.395859546739157 24.68092285021129 84-85 24.59430266321062 25.22760060791192 25.489825185869226 24.688271543008238 86-87 24.530465464957672 25.173436143709065 25.620120170899703 24.67597822043356 88-89 24.510424116048085 24.989845724931794 25.57995513400373 24.919775025016392 90-91 24.584541266499464 25.021573120759644 25.52985771774308 24.864027894997808 92-93 24.54383853397012 25.267600146285524 25.576833495597228 24.611727824147124 94-95 24.69996152977113 25.017532592582235 25.51793871733131 24.76456716031532 96-97 24.64647343809965 25.045604328950056 25.503271110012747 24.804651122937546 98 24.653944598667728 25.08946754186125 25.47894897283686 24.77763888663416 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 430.0 1 337.5 2 471.5 3 689.0 4 501.0 5 385.5 6 717.5 7 1341.5 8 1912.5 9 1908.5 10 1447.0 11 1171.5 12 1165.5 13 1297.5 14 1484.5 15 1678.0 16 1831.0 17 1928.5 18 1988.0 19 1994.5 20 1931.0 21 1825.0 22 1857.5 23 2003.0 24 2203.5 25 2533.5 26 3125.0 27 3969.5 28 5113.0 29 6577.5 30 8440.5 31 11093.0 32 14396.0 33 17951.5 34 22034.5 35 26673.0 36 31702.0 37 36817.0 38 41928.5 39 47250.0 40 52340.0 41 58100.5 42 64814.5 43 71672.0 44 78032.5 45 83996.5 46 91250.0 47 98295.0 48 101466.0 49 101441.5 50 101125.0 51 100495.0 52 100297.0 53 100883.5 54 99861.0 55 96065.5 56 89917.0 57 83727.0 58 77574.0 59 70463.0 60 62071.0 61 52243.5 62 42281.0 63 32607.0 64 24489.0 65 18668.5 66 14249.0 67 10822.0 68 8347.5 69 6557.5 70 4974.5 71 3837.5 72 3135.5 73 2436.5 74 1880.5 75 1497.0 76 1099.5 77 696.0 78 410.5 79 245.0 80 150.0 81 85.5 82 53.0 83 41.0 84 28.5 85 16.0 86 12.0 87 9.5 88 7.0 89 7.5 90 6.0 91 5.5 92 4.5 93 2.5 94 2.5 95 1.5 96 0.5 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.48205102881397405 2 0.04911192265994482 3 0.05687825046631636 4 0.05378069775741673 5 0.06415076552199375 6 0.061995946246237485 7 0.04143537899006314 8 0.01970761795952082 9 0.012479994972088357 10-11 0.015061288896171381 12-13 0.01131280119772038 14-15 0.014904166657314153 16-17 0.014028771326538172 18-19 0.05216458330059953 20-21 0.07921205441816512 22-23 0.09636082448772539 24-25 0.06641781496836231 26-27 0.08089550697734971 28-29 0.08356658503792258 30-31 0.055172351873009326 32-33 0.031491785873812884 34-35 0.40353480145360515 36-37 0.636030822894057 38-39 0.5851456635384377 40-41 0.5786138676088015 42-43 0.5522622235490322 44-45 0.53628064725384 46-47 0.5265839605129368 48-49 0.5161914467142372 50-51 0.5296141751194691 52-53 0.6116095377688193 54-55 0.5826541537508445 56-57 0.539445538065107 58-59 0.5168648277379112 60-61 0.5294794989147342 62-63 0.5413310049313936 64-65 0.5591082639563829 66-67 0.5865148716199078 68-69 0.5411738826925364 70-71 0.48849304060712034 72-73 0.4701321846949472 74-75 0.44950427933640547 76-77 0.4647002444373116 78-79 0.4585949231560022 80-81 0.454936219594041 82-83 0.4752049884066234 84-85 0.4403687434485638 86-87 0.44398255494228 88-89 0.4721972198342136 90-91 0.4537016877173057 92-93 0.4482024093573027 94-95 0.4608619726023708 96-97 0.45439751477510193 98 0.4489655745174664 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2227565.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.21079829161905 #Duplication Level Percentage of deduplicated Percentage of total 1 79.02441103632485 49.16171695094799 2 12.303253489296724 15.307904423065935 3 3.854375314150886 7.193512956265097 4 1.6292873432882846 4.054370650895814 5 0.8582166302178788 2.669517083649873 6 0.5102304807409866 1.9045107311768001 7 0.34504601037203336 1.5025911426807723 8 0.24047884426233956 1.196830469904486 9 0.18653464099205355 1.0444022032640596 >10 0.9708276337864384 10.781589566464785 >50 0.05516068226471346 2.33952005712501 >100 0.0210922445174155 2.142117284572331 >500 7.961431759186164E-4 0.31077009531857536 >1k 2.8950660942473656E-4 0.3906463846685481 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3599 0.1615665536134748 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.489206824492215E-5 2 0.0 0.0 0.0 4.489206824492215E-5 4.489206824492215E-5 3 0.0 0.0 0.0 4.489206824492215E-5 4.489206824492215E-5 4 0.0 0.0 0.0 4.489206824492215E-5 8.97841364898443E-5 5 0.0 0.0 0.0 4.489206824492215E-5 8.97841364898443E-5 6 0.0 0.0 0.0 4.489206824492215E-5 8.97841364898443E-5 7 0.0 0.0 0.0 4.489206824492215E-5 8.97841364898443E-5 8 0.0 0.0 0.0 4.489206824492215E-5 8.97841364898443E-5 9 0.0 0.0 0.0 8.97841364898443E-5 8.97841364898443E-5 10-11 4.489206824492215E-5 0.0 0.0 8.97841364898443E-5 8.97841364898443E-5 12-13 4.489206824492215E-5 0.0 0.0 1.3467620473476644E-4 1.571222388572275E-4 14-15 4.489206824492215E-5 2.2446034122461074E-5 0.0 1.795682729796886E-4 1.795682729796886E-4 16-17 4.489206824492215E-5 4.489206824492215E-5 0.0 1.795682729796886E-4 1.795682729796886E-4 18-19 4.489206824492215E-5 8.97841364898443E-5 0.0 1.795682729796886E-4 1.795682729796886E-4 20-21 4.489206824492215E-5 8.97841364898443E-5 0.0 2.6935240946953287E-4 2.2446034122461072E-4 22-23 4.489206824492215E-5 8.97841364898443E-5 0.0 3.8158258008183824E-4 2.6935240946953287E-4 24-25 4.489206824492215E-5 8.97841364898443E-5 0.0 4.938127506941436E-4 2.9179844359199393E-4 26-27 4.489206824492215E-5 8.97841364898443E-5 0.0 6.733810236738322E-4 3.14244477714455E-4 28-29 4.489206824492215E-5 8.97841364898443E-5 0.0 0.0012794239449802811 3.14244477714455E-4 30-31 4.489206824492215E-5 8.97841364898443E-5 0.0 0.0037933797666959215 3.14244477714455E-4 32-33 4.489206824492215E-5 8.97841364898443E-5 0.0 0.00857438503478013 3.14244477714455E-4 34-35 4.489206824492215E-5 8.97841364898443E-5 0.0 0.015487763544498141 3.591365459593772E-4 36-37 4.489206824492215E-5 8.97841364898443E-5 0.0 0.024982435978299175 3.591365459593772E-4 38-39 4.489206824492215E-5 8.97841364898443E-5 0.0 0.03665437372197893 3.591365459593772E-4 40-41 4.489206824492215E-5 8.97841364898443E-5 0.0 0.05063825298027218 3.591365459593772E-4 42-43 4.489206824492215E-5 8.97841364898443E-5 0.0 0.06442011793146328 4.040286142042993E-4 44-45 4.489206824492215E-5 8.97841364898443E-5 0.0 0.0798629894077165 4.713667165716825E-4 46-47 4.489206824492215E-5 8.97841364898443E-5 0.0 0.0968097451701746 5.835968871839879E-4 48-49 4.489206824492215E-5 8.97841364898443E-5 0.0 0.11346470248904073 6.733810236738322E-4 50-51 4.489206824492215E-5 8.97841364898443E-5 0.0 0.12958095498896777 7.182730919187544E-4 52-53 4.489206824492215E-5 8.97841364898443E-5 0.0 0.1461236821372216 7.407191260412154E-4 54-55 4.489206824492215E-5 1.3467620473476644E-4 0.0 0.1639907252987006 8.080572284085986E-4 56-57 4.489206824492215E-5 1.3467620473476644E-4 0.0 0.18125172553887314 8.080572284085986E-4 58-59 4.489206824492215E-5 1.3467620473476644E-4 0.0 0.20037574661121 8.080572284085986E-4 60-61 4.489206824492215E-5 1.3467620473476644E-4 0.0 0.21873660252338314 8.080572284085986E-4 62-63 4.489206824492215E-5 1.3467620473476644E-4 0.0 0.23626695517302526 8.529492966535207E-4 64-65 4.489206824492215E-5 1.3467620473476644E-4 0.0 0.2548073793581781 8.529492966535207E-4 66-67 4.489206824492215E-5 1.3467620473476644E-4 0.0 0.2742680909423518 8.529492966535207E-4 68-69 4.489206824492215E-5 1.3467620473476644E-4 0.0 0.2947837661302813 8.529492966535207E-4 70-71 4.489206824492215E-5 1.3467620473476644E-4 0.0 0.31653397319494603 8.529492966535207E-4 72-73 4.489206824492215E-5 1.571222388572275E-4 0.0 0.33821684215724346 0.0010100715355107483 74-75 4.489206824492215E-5 1.795682729796886E-4 0.0 0.3602812936996227 0.0011223017061230537 76-77 4.489206824492215E-5 2.0201430710214965E-4 0.0 0.38108876733114405 0.0011223017061230537 78-79 4.489206824492215E-5 2.2446034122461072E-4 0.0 0.4047019952279731 0.0011896398084904369 80-81 4.489206824492215E-5 2.2446034122461072E-4 0.0 0.4275520579646385 0.0013018699791027422 82-83 4.489206824492215E-5 2.2446034122461072E-4 0.0 0.4521304653287334 0.0014814382520824307 84-85 4.489206824492215E-5 2.6935240946953287E-4 0.0 0.47691088699993045 0.0014814382520824307 86 4.489206824492215E-5 2.6935240946953287E-4 0.0 0.4936780744894088 0.001526330320327353 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 2845 0.0 36.896927 1 GTATCAA 4460 0.0 35.40763 1 TACCTGG 2990 0.0 34.03474 2 TCAACGC 5180 0.0 29.025835 4 CAACGCA 5335 0.0 28.096613 5 GTACATG 6035 0.0 27.540228 1 ATCAACG 5545 0.0 27.52855 3 ACCTGGG 3655 0.0 27.466124 3 TATCAAC 5605 0.0 27.315645 2 AACGCAG 5625 0.0 26.966171 6 GGTATCA 2790 0.0 26.568026 1 TACATGG 6425 0.0 25.470398 2 ACATGGG 6620 0.0 24.027699 3 ACGCAGA 6500 0.0 23.11993 7 CGCAGAG 6910 0.0 21.875826 8 GAGTACA 4495 0.0 21.304495 1 GTATAGA 700 0.0 21.046968 1 TATAACG 180 7.0375118E-6 20.373146 2 AGTACAT 4315 0.0 20.18429 2 CATGGGG 5135 0.0 19.996235 4 >>END_MODULE