##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921472_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3733893 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.537517545360835 31.0 31.0 34.0 27.0 34.0 2 30.638338591920014 31.0 31.0 34.0 27.0 34.0 3 30.77939298206992 31.0 31.0 34.0 27.0 34.0 4 34.29351376699868 37.0 35.0 37.0 31.0 37.0 5 34.281887027828596 37.0 35.0 37.0 30.0 37.0 6 34.381788926463614 37.0 35.0 37.0 31.0 37.0 7 34.27942311148177 37.0 35.0 37.0 30.0 37.0 8 34.259277917176526 37.0 35.0 37.0 30.0 37.0 9 35.73508828453306 39.0 37.0 39.0 30.0 39.0 10-11 35.610612569776364 39.0 37.0 39.0 30.0 39.0 12-13 35.45932609745378 39.0 35.0 39.0 30.0 39.0 14-15 36.49015303866501 40.0 37.0 41.0 30.0 41.0 16-17 36.34566710936816 40.0 36.5 41.0 29.5 41.0 18-19 36.16721542368782 40.0 36.0 41.0 29.0 41.0 20-21 36.052826232567455 39.0 36.0 41.0 28.5 41.0 22-23 36.09591611221853 39.0 36.0 41.0 28.5 41.0 24-25 35.9676940394382 39.0 36.0 41.0 27.5 41.0 26-27 35.7030862962597 39.0 36.0 41.0 27.0 41.0 28-29 35.473446614565546 39.0 35.5 40.0 26.5 41.0 30-31 35.23101572541045 39.0 35.0 40.0 25.5 41.0 32-33 34.95751913619378 38.5 35.0 40.0 25.0 41.0 34-35 34.5347713499021 38.0 34.0 40.0 23.5 41.0 36-37 34.15293917099392 38.0 34.0 40.0 21.5 41.0 38-39 33.92004256683306 38.0 33.0 40.0 19.5 41.0 40-41 33.66011197964163 38.0 33.0 40.0 18.0 41.0 42-43 33.370700499451914 38.0 33.0 40.0 16.5 41.0 44-45 33.051944043388495 38.0 32.0 40.0 15.0 41.0 46-47 32.76313220544884 37.0 32.0 40.0 12.5 41.0 48-49 32.55034236385456 37.0 31.0 40.0 9.0 41.0 50-51 31.790731014520233 36.0 30.5 39.0 9.0 40.0 52-53 32.30634996771467 37.0 31.5 39.0 9.0 40.0 54-55 32.74344230003377 37.0 32.0 40.0 8.0 40.5 56-57 32.575345088892476 37.0 32.0 40.0 7.5 41.0 58-59 32.24021162363249 36.5 31.5 39.5 4.0 41.0 60-61 31.774355478317133 36.0 31.0 39.0 2.0 40.5 62-63 31.289178211587746 35.0 30.5 39.0 2.0 40.0 64-65 30.7490708758928 35.0 30.0 38.5 2.0 40.0 66-67 30.25060827934812 35.0 29.0 38.0 2.0 40.0 68-69 29.723027414015345 34.0 29.0 37.0 2.0 39.5 70-71 29.192615990870657 34.0 28.0 36.5 2.0 39.0 72-73 28.64029713759875 34.0 27.5 36.0 2.0 39.0 74-75 28.04146503394714 33.5 26.0 35.0 2.0 37.5 76-77 27.45691172725089 33.0 26.0 35.0 2.0 37.0 78-79 26.88413647632645 33.0 25.0 35.0 2.0 36.5 80-81 26.285907094820338 32.0 24.0 35.0 2.0 36.0 82-83 25.656946382769938 32.0 21.5 34.5 2.0 35.5 84-85 25.02812975626243 31.0 19.5 34.0 2.0 35.0 86-87 24.403086805111982 31.0 16.5 34.0 2.0 35.0 88-89 23.736421745347283 31.0 8.5 34.0 2.0 35.0 90-91 22.976012569187173 30.0 2.0 34.0 2.0 35.0 92-93 22.139374240236663 29.5 2.0 34.0 2.0 35.0 94-95 21.209207789296585 29.0 2.0 34.0 2.0 35.0 96-97 20.29801161950811 28.0 2.0 33.0 2.0 34.5 98 19.66301283941452 27.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 104807.0 3 18482.0 4 14387.0 5 12257.0 6 11574.0 7 12123.0 8 13795.0 9 16063.0 10 17990.0 11 19703.0 12 22109.0 13 25316.0 14 21488.0 15 21065.0 16 23180.0 17 26486.0 18 29996.0 19 30062.0 20 32107.0 21 34663.0 22 38306.0 23 42945.0 24 47697.0 25 53396.0 26 60920.0 27 70366.0 28 81479.0 29 95413.0 30 113898.0 31 138533.0 32 171689.0 33 221912.0 34 300234.0 35 417151.0 36 554678.0 37 569164.0 38 238618.0 39 9841.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.95164735916052 16.934350532021682 13.127579170822315 24.98642293799548 2 16.169061047053752 18.782167117890545 38.442211189923455 26.606560645132248 3 20.838702744824396 21.781816593497968 27.060869229674683 30.31861143200295 4 14.053454538828525 14.434526202059894 34.3267832203061 37.18523603880548 5 16.090179743646022 35.38597677436921 32.233877112063546 16.28996636992122 6 35.75674093091375 32.61381832214702 16.204845510981524 15.424595235957705 7 31.83218609645899 29.788326289867832 18.93665596638642 19.442831647286756 8 28.040909316164566 33.0666316648072 18.84839417808357 20.044064840944674 9 26.901235781495124 16.64923406832382 18.926096586326718 37.52343356385433 10-11 27.069237346156193 24.658964163915773 25.588736817406005 22.683061672522026 12-13 27.309710897675497 21.65309729914834 26.19701963628747 24.840172166888692 14-15 24.203898516011762 23.352926270947183 24.012620944693168 28.430554268347883 16-17 24.74796757549321 26.313211007060954 24.48435707457299 24.454464342872846 18-19 24.69472874677271 25.7953371589656 25.71060695178926 23.799327142472425 20-21 25.334971407633773 24.838201743940683 25.599646296032475 24.227180552393072 22-23 24.95540099960203 24.548303173743818 25.57638904992501 24.91990677672914 24-25 24.861972919597367 24.686486035955514 25.682993182329213 24.768547862117906 26-27 24.80584956178947 24.824920840122648 25.78438170862035 24.584847889467536 28-29 24.693332132488077 25.234047554812356 25.544592034938162 24.528028277761404 30-31 24.99031963039612 24.939686942876307 25.324262235250266 24.745731191477308 32-33 24.819659921718234 24.979170406170383 25.3745844127662 24.826585259345187 34-35 25.067585927606185 24.92717714618849 25.504153306006305 24.50108362019902 36-37 25.0273201362038 24.811804724601302 25.49484518993778 24.66602994925712 38-39 24.953241471198552 24.99208681098348 25.458405988755324 24.596265729062644 40-41 25.08908393951626 24.993915611040336 25.38541758841624 24.531582861027168 42-43 24.971841498030958 24.894189337430618 25.19985635629456 24.934112808243867 44-45 24.973626249353785 24.87202201447527 25.259065892641736 24.89528584352921 46-47 25.157505743329377 24.971401140831308 25.27132233747919 24.59977077836012 48-49 25.128262351358888 25.006851247438522 25.102607189044896 24.762279212157694 50-51 24.73010453615539 25.253976696540104 25.32097686979552 24.694941897508986 52-53 25.020532597249602 25.20606697830227 25.035056311052138 24.738344113395982 54-55 24.894541080793136 24.944443733580446 25.303823647661684 24.85719153796474 56-57 24.930523225208688 25.03861915095221 25.21824498745366 24.81261263638545 58-59 25.176963205329006 24.901160658954065 25.110401780642615 24.81147435507431 60-61 25.059909537641474 24.961474946498406 25.367086849006693 24.61152866685343 62-63 24.80376214445142 25.09944845254088 25.279429081196735 24.817360321810966 64-65 24.829985378648303 25.13416820560276 25.213603970630178 24.82224244511876 66-67 24.969878799968697 24.961689335633746 25.089811350031848 24.97862051436571 68-69 24.797257880436575 25.028384233324118 25.197902023806268 24.976455862433035 70-71 24.89456058860369 24.84857928954923 25.224342179451675 25.032517942395405 72-73 25.015855888340106 24.75585160987384 25.32965044392451 24.898642057861547 74-75 24.77111547359209 25.24518778202816 25.118312941260662 24.865383803119087 76-77 24.949932557277883 24.87348940007055 25.080714664143855 25.095863378507715 78-79 24.908076562954033 24.90478061065252 25.242272673461265 24.944870152932186 80-81 24.972937255192637 24.954843858018087 25.183789230890714 24.888429655898562 82-83 25.05303959105426 24.806207704222608 25.202174757783176 24.938577946939958 84-85 24.92744457346475 24.964097219765634 25.077458138306508 25.03100006846311 86-87 24.88696528939226 24.960299643201196 25.25022052764686 24.902514539759675 88-89 24.740381914134442 24.845690307483824 25.12885377323458 25.285074005147155 90-91 24.95200239342325 24.68015944675763 25.15285784852343 25.214980311295687 92-93 25.10720896196974 24.965631254977076 25.092102856035986 24.835056927017195 94-95 25.112373366395563 24.741620630313285 25.14355754732516 25.002448455965997 96-97 24.880921120600593 24.64459286107859 25.388365030305117 25.086120988015704 98 24.923850657432073 24.89756628799598 25.02341918484557 25.155163869726376 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 414.0 1 315.5 2 345.0 3 483.5 4 411.0 5 372.0 6 643.0 7 1390.0 8 2074.0 9 1974.5 10 1555.5 11 1469.5 12 1614.0 13 1850.0 14 2144.5 15 2410.0 16 2643.5 17 2727.5 18 2722.0 19 2665.0 20 2473.0 21 2294.0 22 2128.0 23 2050.0 24 2170.0 25 2365.5 26 2735.0 27 3293.5 28 4216.5 29 5808.5 30 8236.5 31 11932.0 32 17076.0 33 23176.5 34 30672.5 35 39475.5 36 49114.0 37 58819.0 38 68639.0 39 78501.0 40 88028.5 41 98223.0 42 109708.0 43 121910.0 44 133160.5 45 145483.5 46 162307.0 47 176924.5 48 181063.5 49 176522.5 50 172698.0 51 171956.0 52 171327.5 53 172210.0 54 170318.0 55 163124.0 56 152919.5 57 141943.0 58 130919.5 59 118194.5 60 104217.5 61 88850.0 62 72440.0 63 56348.0 64 42118.5 65 32077.5 66 24849.0 67 19019.5 68 14756.5 69 11489.5 70 8782.0 71 6872.0 72 5591.5 73 4374.5 74 3370.5 75 2549.5 76 1783.5 77 1156.5 78 686.5 79 417.5 80 253.0 81 158.0 82 85.5 83 51.0 84 35.5 85 22.0 86 18.5 87 12.0 88 6.0 89 8.0 90 9.5 91 8.5 92 9.5 93 7.0 94 3.0 95 4.0 96 6.0 97 6.0 98 3.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.48386496345771024 2 0.048769474647505966 3 0.056402258982782845 4 0.05487570211572747 5 0.06459745900592224 6 0.0642225152140139 7 0.04263646547986244 8 0.020300528161894302 9 0.012480271930663252 10-11 0.015024533375755544 12-13 0.011315268005805202 14-15 0.015399477167663884 16-17 0.014569244485581135 18-19 0.05484892041630545 20-21 0.08274206036434359 22-23 0.09931993230657656 24-25 0.06856115052038182 26-27 0.0844159165782201 28-29 0.08536666690770196 30-31 0.05661651257815904 32-33 0.032754018393135534 34-35 0.4046313057176518 36-37 0.6351949560418577 38-39 0.5821270186371168 40-41 0.5764359075099367 42-43 0.5500559335792429 44-45 0.5349108825560883 46-47 0.5244928014809209 48-49 0.5153066785791666 50-51 0.5282288485502933 52-53 0.6085069925678106 54-55 0.5802389088278641 56-57 0.5372944538046485 58-59 0.5163243831572035 60-61 0.52897873613411 62-63 0.5399190603480067 64-65 0.557862798960763 66-67 0.5840151284463695 68-69 0.5389415283191029 70-71 0.4888195778507847 72-73 0.4715721634230011 74-75 0.45111094506457466 76-77 0.46616226013975226 78-79 0.46099339215130164 80-81 0.4570966548853971 82-83 0.4767410314114518 84-85 0.44357189667727487 86-87 0.44650449276398657 88-89 0.4730987202900565 90-91 0.45638693985071344 92-93 0.45135198035937296 94-95 0.4623860405212468 96-97 0.45606555945764915 98 0.45140554375821695 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3733893.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.6877481943872 #Duplication Level Percentage of deduplicated Percentage of total 1 75.29992628312132 42.685832601935 2 13.697987970720213 15.530161857078648 3 4.663353070054111 7.9306495373024966 4 2.0915780848246786 4.7426740720576 5 1.1689461171700983 3.3132461571472587 6 0.6816782360410985 2.31856825165751 7 0.4728251200963051 1.876237394360016 8 0.3282922377064809 1.488811816422152 9 0.2295864108524169 1.171326298252944 >10 1.2696381497668856 12.730315111256177 >50 0.07009872549154174 2.7005506152073897 >100 0.02466767116513258 2.266860699326297 >500 7.109615085403054E-4 0.2663209464487209 >1k 6.635640491506035E-4 0.7864152079706791 >5k 4.739743208218591E-5 0.1920294335770419 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 7147 0.19140880576920655 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4015 0.10752852317942693 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.6781699422024146E-5 2 0.0 0.0 0.0 0.0 2.6781699422024146E-5 3 0.0 0.0 0.0 0.0 2.6781699422024146E-5 4 0.0 0.0 0.0 0.0 2.6781699422024146E-5 5 0.0 0.0 0.0 0.0 2.6781699422024146E-5 6 0.0 0.0 0.0 0.0 8.034509826607243E-5 7 0.0 0.0 0.0 0.0 1.0712679768809658E-4 8 0.0 0.0 0.0 0.0 1.0712679768809658E-4 9 0.0 2.6781699422024146E-5 0.0 0.0 1.0712679768809658E-4 10-11 2.6781699422024146E-5 2.6781699422024146E-5 0.0 0.0 1.0712679768809658E-4 12-13 2.6781699422024146E-5 2.6781699422024146E-5 0.0 0.0 3.4816209248631386E-4 14-15 4.017254913303622E-5 2.6781699422024146E-5 0.0 0.0 4.0172549133036216E-4 16-17 6.695424855506036E-5 2.6781699422024146E-5 0.0 2.6781699422024146E-5 5.088522890184588E-4 18-19 8.034509826607243E-5 2.6781699422024146E-5 0.0 6.695424855506036E-5 5.49024838151495E-4 20-21 8.034509826607243E-5 2.6781699422024146E-5 0.0 1.0712679768809657E-4 6.427607861285795E-4 22-23 8.034509826607243E-5 2.6781699422024146E-5 0.0 1.7408104624315696E-4 7.231058843946518E-4 24-25 1.0712679768809658E-4 2.6781699422024146E-5 0.0 2.1425359537619317E-4 7.498875838166761E-4 26-27 1.0712679768809658E-4 2.6781699422024146E-5 0.0 3.079895433532777E-4 7.900601329497122E-4 28-29 1.2051764739910866E-4 2.6781699422024146E-5 0.0 0.0010444862774589417 8.034509826607243E-4 30-31 1.3390849711012072E-4 2.6781699422024146E-5 0.0 0.0031870222312208735 8.034509826607243E-4 32-33 1.3390849711012072E-4 2.6781699422024146E-5 0.0 0.008476407867070643 8.971869306378089E-4 34-35 1.6069019653214487E-4 2.6781699422024146E-5 0.0 0.015935111156104367 9.641411791928692E-4 36-37 1.6069019653214487E-4 2.6781699422024146E-5 0.0 0.026460319028959855 9.641411791928692E-4 38-39 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.0430381909711928 9.641411791928692E-4 40-41 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.061142619780481126 9.641411791928692E-4 42-43 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.07999693617358612 9.909228786148933E-4 44-45 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.09984217544530602 0.0010444862774589415 46-47 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.12257983825460451 0.00109804967630299 48-49 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.14446048668239825 0.0011516130751470382 50-51 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.166408089358747 0.0013123032716791832 52-53 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.18763258615070116 0.001446211768789304 54-55 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.20982122412184817 0.00148638431792234 56-57 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.23400509869993597 0.001513166017344364 58-59 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.2587112164167532 0.0015265568670553762 60-61 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.2824264112549556 0.0015399477167663883 62-63 1.8747189595416902E-4 2.6781699422024146E-5 0.0 0.3063558596885342 0.0016604653641654969 64-65 2.0086274566518108E-4 2.6781699422024146E-5 0.0 0.3307673787117092 0.0017274196127205575 66-67 2.1425359537619317E-4 2.6781699422024146E-5 0.0 0.35891494480425656 0.0017675921618535936 68-69 2.1425359537619317E-4 2.6781699422024146E-5 0.0 0.38572342592570275 0.0018211555606976418 70-71 2.1425359537619317E-4 2.6781699422024146E-5 0.0 0.41346926652691973 0.0018613281098306782 72-73 2.1425359537619317E-4 2.6781699422024146E-5 0.0 0.4390457894749528 0.002008627456651811 74-75 2.1425359537619317E-4 2.6781699422024146E-5 0.0 0.46726030981605526 0.0021693176531839557 76-77 2.1425359537619317E-4 2.6781699422024146E-5 0.0 0.4951266680646714 0.002249662751450028 78-79 2.1425359537619317E-4 2.6781699422024146E-5 0.0 0.5266621191341048 0.002289835300583064 80-81 2.1425359537619317E-4 2.6781699422024146E-5 0.0 0.5592688381804192 0.0023300078497161007 82-83 2.4103529479821732E-4 2.6781699422024146E-5 0.0 0.5909381977469628 0.002396962098271161 84-85 2.6781699422024144E-4 2.6781699422024146E-5 0.0 0.6223665220187081 0.002437134647404197 86 2.6781699422024144E-4 2.6781699422024146E-5 0.0 0.6469922946372593 0.002437134647404197 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 12045 0.0 24.878721 1 TACATGG 12390 0.0 23.456844 2 GAGTACA 9385 0.0 21.97342 1 ACATGGG 12905 0.0 21.668234 3 AGTACAT 9020 0.0 21.141628 2 GTACCTG 3695 0.0 21.053589 1 TATATCG 205 9.620198E-7 20.125204 5 CATGGGG 9750 0.0 19.135572 4 TACCTGG 4080 0.0 18.313826 2 GTATCAA 14325 0.0 18.219746 1 AGAGTAC 10270 0.0 17.03949 10-11 GTATACG 280 9.918549E-7 16.439777 1 TATACCG 335 2.2639142E-8 16.420565 5 GTACACG 875 0.0 16.308256 1 GTATAGG 855 0.0 16.151358 1 TCAACGC 16045 0.0 16.142113 4 TATCAAC 16375 0.0 15.872795 2 CAACGCA 16315 0.0 15.818779 5 ATCAACG 16555 0.0 15.672522 3 GTGTACG 635 0.0 15.222972 1 >>END_MODULE