##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921472_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3733893 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97205838517601 33.0 31.0 34.0 30.0 34.0 2 32.09020799471222 34.0 31.0 34.0 30.0 34.0 3 32.21878345201643 34.0 31.0 34.0 30.0 34.0 4 35.7436680697599 37.0 35.0 37.0 35.0 37.0 5 35.553612275445495 37.0 35.0 37.0 33.0 37.0 6 35.59021777003251 37.0 35.0 37.0 35.0 37.0 7 35.521828022388426 37.0 35.0 37.0 33.0 37.0 8 35.47369595218717 37.0 35.0 37.0 33.0 37.0 9 37.10127338946242 39.0 37.0 39.0 34.0 39.0 10-11 37.01599831596674 39.0 37.0 39.0 33.5 39.0 12-13 36.902861169294354 39.0 37.0 39.0 33.0 39.0 14-15 38.21694435271712 40.0 38.0 41.0 33.0 41.0 16-17 38.12894611602421 40.0 38.0 41.0 33.0 41.0 18-19 38.02132626724976 40.0 38.0 41.0 33.0 41.0 20-21 37.90370050775424 40.0 38.0 41.0 33.0 41.0 22-23 37.8726565008692 40.0 38.0 41.0 33.0 41.0 24-25 37.93017702971135 40.0 38.0 41.0 33.0 41.0 26-27 37.82891529028818 40.0 38.0 41.0 33.0 41.0 28-29 37.69872784249576 40.0 38.0 41.0 33.0 41.0 30-31 37.569798331125185 40.0 38.0 41.0 32.0 41.0 32-33 37.416303975502245 40.0 37.0 41.0 32.0 41.0 34-35 37.27748371471812 40.0 37.0 41.0 32.0 41.0 36-37 37.188622169944345 40.0 37.0 41.0 31.5 41.0 38-39 37.15836969618572 40.0 37.0 41.0 31.0 41.0 40-41 37.00664079018868 40.0 37.0 41.0 31.0 41.0 42-43 36.774419218761764 40.0 36.0 41.0 30.5 41.0 44-45 36.582095550140295 39.0 36.0 41.0 30.0 41.0 46-47 36.33612666458305 39.0 35.5 41.0 30.0 41.0 48-49 36.022440252037214 39.0 35.0 40.0 29.5 41.0 50-51 35.752759117628706 39.0 35.0 40.0 28.5 41.0 52-53 35.44693661548416 38.0 35.0 40.0 28.0 41.0 54-55 35.125549526995016 38.0 34.0 40.0 27.5 41.0 56-57 34.74614912639436 38.0 34.0 40.0 26.5 41.0 58-59 34.36460217258502 37.0 34.0 40.0 26.0 41.0 60-61 33.93479151652176 36.5 33.0 39.5 26.0 41.0 62-63 33.50382107896504 36.0 33.0 39.0 24.5 40.0 64-65 33.000381907033756 35.5 32.0 39.0 23.0 40.0 66-67 32.47797272176787 35.0 31.5 38.0 22.0 40.0 68-69 31.980857512521116 35.0 31.0 37.5 20.5 39.5 70-71 31.43422548530448 34.5 31.0 37.0 19.5 39.0 72-73 30.901921399461635 34.0 30.0 36.0 18.0 39.0 74-75 30.390290241311146 34.0 29.5 36.0 16.0 38.0 76-77 29.087172155174237 32.5 28.0 34.5 13.0 36.0 78-79 30.031700961971865 34.0 30.0 35.0 14.0 37.0 80-81 30.067770956478935 34.0 30.0 35.0 14.0 36.5 82-83 29.743476044975043 34.0 30.0 35.0 8.5 36.0 84-85 29.267055456597177 34.0 29.0 35.0 6.0 35.5 86-87 28.78022187566703 34.0 29.0 35.0 2.0 35.0 88-89 28.244657653553546 33.0 28.0 35.0 2.0 35.0 90-91 27.78849085927208 33.0 27.0 35.0 2.0 35.0 92-93 27.36993039168503 33.0 26.5 34.5 2.0 35.0 94-95 26.89072289966531 32.5 25.5 34.0 2.0 35.0 96-97 26.144093577400316 32.0 24.5 34.0 2.0 35.0 98-99 25.16541355095071 32.0 21.0 34.0 2.0 35.0 100-101 21.560328857843544 28.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 24566.0 3 12282.0 4 7238.0 5 5457.0 6 4793.0 7 4830.0 8 5677.0 9 6704.0 10 7846.0 11 9336.0 12 11106.0 13 12660.0 14 14112.0 15 15798.0 16 17585.0 17 19890.0 18 20611.0 19 19320.0 20 19672.0 21 21147.0 22 22304.0 23 25366.0 24 28900.0 25 33980.0 26 40420.0 27 49129.0 28 59986.0 29 73292.0 30 90882.0 31 113537.0 32 146558.0 33 198642.0 34 283720.0 35 431863.0 36 675058.0 37 831461.0 38 357717.0 39 10448.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.28165982100707 17.3660058525083 13.490566316560459 24.86176800992417 2 16.311260124486697 19.00504379745215 38.119330146846735 26.564365931214418 3 20.819533208951427 21.92386455978072 27.317095120018898 29.939507111248957 4 14.330997606212431 14.63905740561448 34.28612313334546 36.74382185482762 5 16.178567449553707 35.30635222632163 32.32871935620717 16.186360967917487 6 35.892997736641064 32.690315364203556 16.151153573432676 15.265533325722702 7 31.91828248166027 29.729227035272952 18.976512927055964 19.37597755601081 8 28.14524147889116 33.02578282355067 18.84846033062216 19.980515366936014 9 26.82674139298572 16.699418403143092 18.986214248627096 37.487625955244084 10-11 27.11208663832568 24.591461864256274 25.716299666698344 22.580151830719696 12-13 27.191876317058572 21.651095854386835 26.32837110029362 24.828656728260977 14-15 24.164449228218867 23.368154452967907 24.05512601781195 28.412270301001275 16-17 24.717329615476118 26.29273946208236 24.599289077687068 24.390641844754455 18-19 24.667790130220858 25.81561176743233 25.77704517475529 23.73955292759152 20-21 25.2973346136696 24.822927966886635 25.625781318332912 24.253956101110845 22-23 24.958384741205737 24.55292231148549 25.64901183017384 24.83968111713493 24-25 24.860951746150302 24.68400194283115 25.701443219205842 24.753603091812703 26-27 24.800175294463358 24.79677333895504 25.85539760421971 24.54765376236189 28-29 24.747957130444835 25.206979127363972 25.61992614341293 24.425137598778264 30-31 24.909367840688805 24.91596974000033 25.42679337313935 24.747869046171513 32-33 24.737798830590418 24.94828827009499 25.515985707394773 24.79792719191982 34-35 25.04002505893443 24.89062495605781 25.592976855974204 24.476373129033558 36-37 24.92368154725276 24.8413332838717 25.584663965115084 24.65032120376046 38-39 24.856047710437394 25.012609301821016 25.587347037718082 24.543995950023504 40-41 25.036021462603976 24.980840787412163 25.449729199497163 24.5334085504867 42-43 24.908768568848647 24.909491697876156 25.283496709160318 24.89824302411488 44-45 24.88883454460667 24.790867517776697 25.37900449429595 24.941293443320685 46-47 25.005528356147483 24.9753383749084 25.402565451919507 24.616567817024603 48-49 25.04548977638367 24.987318569845353 25.276219492924913 24.690972160846066 50-51 24.70467710367889 25.267836517311732 25.4053018915048 24.62218448750458 52-53 25.02955419894596 25.122140393559622 25.08656019120375 24.76174521629067 54-55 24.935175857122942 24.863746434387576 25.318784264261545 24.882293444227937 56-57 24.933043689260582 25.026702176722882 25.265776379849044 24.774477754167496 58-59 25.201142787509685 24.907116711225203 25.157260497033562 24.734480004231553 60-61 25.03065652571874 24.981898019595803 25.400342688868903 24.587102765816553 62-63 24.79513677257935 25.113880611147117 25.320675720866646 24.770306895406886 64-65 24.89680389365096 25.10836528582616 25.197044836337884 24.79778598418499 66-67 24.995157428451172 24.97030827154087 25.052236812599315 24.982297487408644 68-69 24.837523543258968 25.032100028552712 25.2194009986616 24.910975429526722 70-71 24.934638675958094 24.855664036500023 25.227448836567092 24.98224845097479 72-73 25.076019415642058 24.862290364765943 25.272469043377647 24.78922117621435 74-75 24.770435094826986 25.354469113572662 25.070658028005983 24.80443776359437 76-77 24.935134222495154 24.899109991969095 25.106887330525268 25.05886845501048 78-79 24.92888759643694 24.93616433913641 25.270572879325343 24.864375185101306 80-81 25.012179542735026 25.042934813694185 25.179190308553327 24.765695335017462 82-83 25.04265449311407 24.927409004417743 25.213111732671184 24.816824769797 84-85 24.89093122646955 25.112618012185273 25.085041097504952 24.911409663840224 86-87 24.861464175486443 25.117426816631568 25.221745133767026 24.799363874114967 88-89 24.753257820688095 25.013789236385275 25.100664454734485 25.132288488192145 90-91 24.895720829889093 24.936320955524224 25.106243476057255 25.061714738529428 92-93 25.06961899992471 25.147242878605308 25.16877231820485 24.614365803265134 94-95 25.05778602004177 25.001178486619622 25.08829275321794 24.852742740120668 96-97 24.79248731984131 24.944910360066288 25.352121729523425 24.910480590568977 98-99 24.818703989650558 25.05601259931941 25.134410150165998 24.99087326086403 100-101 25.272750209179467 24.490309178505886 25.24786829782014 24.989072314494504 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 152.0 1 119.0 2 212.5 3 344.0 4 263.5 5 213.0 6 454.0 7 1170.5 8 1717.0 9 1561.0 10 1089.5 11 720.5 12 655.0 13 694.5 14 756.0 15 787.0 16 844.5 17 930.0 18 985.5 19 1035.5 20 1046.0 21 1107.5 22 1191.0 23 1265.5 24 1392.0 25 1605.0 26 1892.0 27 2353.5 28 3061.5 29 4235.5 30 6283.0 31 9386.0 32 13686.0 33 19078.0 34 25466.5 35 33126.0 36 42145.0 37 51862.0 38 61399.5 39 70316.5 40 79866.5 41 89689.0 42 100343.0 43 111538.5 44 122944.5 45 133991.5 46 145569.5 47 161276.0 48 180370.0 49 184441.0 50 173769.5 51 169748.0 52 169846.0 53 169247.0 54 168402.5 55 162981.5 56 152303.5 57 140394.0 58 129701.5 59 117096.5 60 102353.0 61 89030.0 62 74176.5 63 56838.5 64 42229.5 65 32212.0 66 24922.0 67 19470.5 68 14923.0 69 11430.5 70 8896.5 71 7026.5 72 5486.5 73 4442.0 74 3363.0 75 2409.5 76 1826.0 77 1202.0 78 722.5 79 392.0 80 214.0 81 120.5 82 65.5 83 39.0 84 25.5 85 12.5 86 5.0 87 4.5 88 3.0 89 2.0 90 1.5 91 0.0 92 0.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.32325511202383145 2 0.0 3 0.006186572566487577 4 0.05758065375735191 5 5.62415687862507E-4 6 0.060821239387416834 7 0.07094472176894197 8 0.10107413361871913 9 0.08843317149152373 10-11 0.09342795843373122 12-13 0.09416445516783689 14-15 0.06153095442210047 16-17 0.03420023016192483 18-19 0.03717299879776951 20-21 0.02730394256075362 22-23 0.03985116873997193 24-25 0.03203091250874088 26-27 0.019979147768830013 28-29 0.022697490260165463 30-31 0.0031870222312208735 32-33 0.005731283676313167 34-35 0.00788721047978611 36-37 0.00962802094221768 38-39 0.01440855428904899 40-41 0.018800752994260952 42-43 0.0032004130809318854 44-45 0.013230159514479927 46-47 0.023206342549183922 48-49 0.0023300078497161007 50-51 0.006039273219666444 52-53 0.002008627456651811 54-55 0.0036824836705283202 56-57 0.003079895433532777 58-59 0.0010846588265919779 60-61 0.0049680052427854785 62-63 0.013056078468236771 64-65 0.006025882369955432 66-67 0.03674449160701712 68-69 0.05887956617932008 70-71 0.011141186959562044 72-73 0.03024992949717627 74-75 0.04909085504057025 76-77 0.3052712008619422 78-79 0.07573864596548428 80-81 0.03212464845671796 82-83 0.026567445826647954 84-85 0.018693626196572853 86-87 0.11897769968234227 88-89 0.5341743858219825 90-91 0.12963681605230787 92-93 0.048046368763111316 94-95 0.007793474531809026 96-97 0.005503639231225961 98-99 0.009587848393084644 100-101 0.006882896751460206 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3733893.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.94944031300916 #Duplication Level Percentage of deduplicated Percentage of total 1 71.96045679006944 38.10265911702657 2 15.285612691062148 16.187292736663412 3 5.361042349134981 8.515925756431113 4 2.420229255466045 5.125991380243918 5 1.3232368698306232 3.5032325829534834 6 0.8382214824519852 2.663001501250407 7 0.5465411007979395 2.0257331776714778 8 0.3664595347331941 1.5523061809190697 9 0.29464707065616763 1.4041257733000567 >10 1.486599724570574 13.955068541650123 >50 0.08390832195484381 3.036418320759899 >100 0.03137485722357624 2.66601964862478 >500 9.108829553399426E-4 0.3147055930344096 >1k 7.08464486983393E-4 0.7539000617319679 >5k 5.060460621309947E-5 0.1936196277393801 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 7226 0.19352456002354648 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0712679768809658E-4 2 0.0 0.0 0.0 2.6781699422024146E-5 1.0712679768809658E-4 3 0.0 0.0 0.0 2.6781699422024146E-5 1.0712679768809658E-4 4 0.0 2.6781699422024146E-5 0.0 2.6781699422024146E-5 1.0712679768809658E-4 5 2.6781699422024146E-5 2.6781699422024146E-5 0.0 2.6781699422024146E-5 1.3390849711012072E-4 6 2.6781699422024146E-5 2.6781699422024146E-5 0.0 2.6781699422024146E-5 1.3390849711012072E-4 7 2.6781699422024146E-5 2.6781699422024146E-5 0.0 2.6781699422024146E-5 1.3390849711012072E-4 8 2.6781699422024146E-5 2.6781699422024146E-5 0.0 2.6781699422024146E-5 1.8747189595416902E-4 9 2.6781699422024146E-5 2.6781699422024146E-5 0.0 2.6781699422024146E-5 1.8747189595416902E-4 10-11 8.034509826607243E-5 2.6781699422024146E-5 0.0 2.6781699422024146E-5 2.410352947982173E-4 12-13 1.0712679768809657E-4 2.6781699422024146E-5 0.0 2.6781699422024146E-5 5.624156878625071E-4 14-15 1.3390849711012072E-4 2.6781699422024146E-5 0.0 4.017254913303622E-5 6.159790867065554E-4 16-17 1.3390849711012072E-4 2.6781699422024146E-5 0.0 6.695424855506036E-5 6.829333352616157E-4 18-19 1.3390849711012072E-4 2.6781699422024146E-5 0.0 9.373594797708451E-5 7.23105884394652E-4 20-21 1.3390849711012072E-4 2.6781699422024146E-5 0.0 1.3390849711012072E-4 7.36496734105664E-4 22-23 1.3390849711012072E-4 2.6781699422024146E-5 0.0 2.0086274566518108E-4 7.900601329497122E-4 24-25 1.4729934682113278E-4 2.6781699422024146E-5 0.0 2.410352947982173E-4 8.570143815047727E-4 26-27 1.6069019653214487E-4 4.017254913303622E-5 0.0 3.347712427753018E-4 8.837960809267968E-4 28-29 2.2764444508720523E-4 5.356339884404829E-5 0.0 0.0010712679768809658 9.105777803488209E-4 30-31 2.6781699422024144E-4 5.356339884404829E-5 0.0 0.003133458832376825 9.641411791928692E-4 32-33 2.6781699422024144E-4 5.356339884404829E-5 0.0 0.008369281069382546 9.909228786148933E-4 34-35 2.6781699422024144E-4 5.356339884404829E-5 0.0 0.01577442095957222 0.0010177045780369175 36-37 2.6781699422024144E-4 5.356339884404829E-5 0.0 0.026138938635895566 0.0010177045780369175 38-39 2.6781699422024144E-4 5.356339884404829E-5 0.0 0.042462384433619285 0.0010444862774589417 40-41 2.6781699422024144E-4 5.356339884404829E-5 0.0 0.06048646814464153 0.0010444862774589417 42-43 2.8120784393125355E-4 5.356339884404829E-5 0.0 0.07943452048572361 0.0011248313757250142 44-45 2.945986936422656E-4 5.356339884404829E-5 0.0 0.09921280550888845 0.0012453490231241228 46-47 2.945986936422656E-4 5.356339884404829E-5 0.0 0.12187012321992088 0.0013256941213901953 48-49 2.945986936422656E-4 5.356339884404829E-5 0.0 0.14365703569973753 0.0014060392196562676 50-51 2.945986936422656E-4 5.356339884404829E-5 0.0 0.16544394817955416 0.001446211768789304 52-53 2.945986936422656E-4 5.356339884404829E-5 0.0 0.18605246588480173 0.0015935111156104367 54-55 2.945986936422656E-4 5.356339884404829E-5 0.0 0.20755817052068712 0.0016604653641654969 56-57 2.945986936422656E-4 5.356339884404829E-5 0.0 0.23123319280975646 0.001673856213876509 58-59 2.945986936422656E-4 5.356339884404829E-5 0.0 0.2555375850352434 0.001687247063587521 60-61 3.2138039306428974E-4 5.356339884404829E-5 0.0 0.27878410013356036 0.0017140287630095453 62-63 3.2138039306428974E-4 5.356339884404829E-5 0.0 0.3019636609833222 0.0017943738612756176 64-65 3.2138039306428974E-4 5.356339884404829E-5 0.0 0.3258127643186347 0.0018211555606976418 66-67 3.347712427753018E-4 5.356339884404829E-5 0.0 0.35331756962505356 0.001847937260119666 68-69 3.4816209248631386E-4 5.356339884404829E-5 0.0 0.37942972656152707 0.001847937260119666 70-71 3.4816209248631386E-4 5.356339884404829E-5 0.0 0.4063319436309504 0.0019684549075187747 72-73 3.4816209248631386E-4 5.356339884404829E-5 0.0 0.43119875154429976 0.002236271901739016 74-75 3.615529421973259E-4 5.356339884404829E-5 0.0 0.4589981555443608 0.002396962098271161 76-77 3.7494379190833804E-4 5.356339884404829E-5 0.0 0.4859137634634951 0.002423743797693185 78-79 3.7494379190833804E-4 5.356339884404829E-5 0.0 0.5172215700878413 0.0025040888959592575 80-81 4.5528889017441046E-4 5.356339884404829E-5 0.0 0.5495738629896465 0.0025576522948033056 82-83 4.686797398854225E-4 5.356339884404829E-5 0.0 0.5808013245157266 0.002758515040468487 84-85 4.820705895964346E-4 8.034509826607243E-5 0.0 0.6119752226429627 0.002812078439312535 86-87 4.820705895964346E-4 8.034509826607243E-5 0.0 0.6442739521459238 0.0028924235375786074 88-89 4.820705895964346E-4 8.034509826607243E-5 0.0 0.6778046398222981 0.00297276863584468 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 12390 0.0 26.295832 1 TACATGG 12905 0.0 24.287426 2 ACATGGG 12955 0.0 23.570517 3 GTACCTG 3805 0.0 21.781948 1 CATGGGG 9465 0.0 21.775326 4 TACCTGG 3935 0.0 20.878386 2 GAGTACA 9680 0.0 19.928831 1 AGTACAT 9020 0.0 19.480082 2 GTGTACG 580 0.0 18.06745 1 GTATCAA 14560 0.0 17.534992 1 AGAGTAC 10440 0.0 17.50776 10-11 GTGTAGC 2075 0.0 16.527857 1 TATACTG 1275 0.0 16.009552 5 TCAACGC 16170 0.0 15.536073 4 CAACGCA 16350 0.0 15.329819 5 ACCTGGG 5015 0.0 15.2458105 3 GTACGCT 475 3.074092E-10 14.996614 3 ATCAACG 16805 0.0 14.92076 3 TATCAAC 16855 0.0 14.904675 2 ATGGGGC 4320 0.0 14.834431 5 >>END_MODULE