##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921471_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5093669 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.78165856477914 31.0 31.0 34.0 28.0 34.0 2 30.888494913980473 31.0 31.0 34.0 27.0 34.0 3 31.029560420985344 33.0 31.0 34.0 28.0 34.0 4 34.54202128171265 37.0 35.0 37.0 32.0 37.0 5 34.5367796768891 37.0 35.0 37.0 32.0 37.0 6 34.637285814998975 37.0 35.0 37.0 32.0 37.0 7 34.5337755554984 37.0 35.0 37.0 32.0 37.0 8 34.51463395049816 37.0 35.0 37.0 32.0 37.0 9 36.019624557465356 39.0 37.0 39.0 32.0 39.0 10-11 35.9072962927116 39.0 37.0 39.0 31.0 39.0 12-13 35.76583873039257 39.0 37.0 39.0 30.0 39.0 14-15 36.86424746091668 40.0 37.0 41.0 31.0 41.0 16-17 36.732857690595914 40.0 37.0 41.0 30.5 41.0 18-19 36.55574174529205 40.0 37.0 41.0 30.0 41.0 20-21 36.441088633753 40.0 37.0 41.0 30.0 41.0 22-23 36.490796025419 40.0 37.0 41.0 30.0 41.0 24-25 36.37926168740057 40.0 37.0 41.0 30.0 41.0 26-27 36.13692075397911 39.5 36.0 41.0 29.0 41.0 28-29 35.92124998699366 39.0 36.0 41.0 27.5 41.0 30-31 35.68360998722139 39.0 36.0 40.0 27.0 41.0 32-33 35.431020252788315 39.0 35.0 40.0 26.5 41.0 34-35 35.030172553418765 38.5 35.0 40.0 25.0 41.0 36-37 34.67137077419047 38.0 34.0 40.0 24.0 41.0 38-39 34.46097891323524 38.0 34.0 40.0 23.5 41.0 40-41 34.203264876457425 38.0 33.5 40.0 22.5 41.0 42-43 33.92398249670326 38.0 33.0 40.0 20.5 41.0 44-45 33.61929652280115 38.0 33.0 40.0 19.0 41.0 46-47 33.350669625372205 38.0 33.0 40.0 18.0 41.0 48-49 33.16153366070705 38.0 32.5 40.0 15.5 41.0 50-51 32.37770603076093 36.5 31.0 39.0 15.0 40.0 52-53 32.83923602024396 37.0 32.5 39.0 17.5 40.0 54-55 33.269110831504754 38.0 33.0 40.0 16.5 41.0 56-57 33.11867359265001 37.0 33.0 40.0 14.5 41.0 58-59 32.79270345206962 37.0 32.5 40.0 11.0 41.0 60-61 32.34515061736442 36.0 32.0 39.0 8.0 41.0 62-63 31.85978633476184 35.5 31.0 39.0 6.5 40.0 64-65 31.323517193598562 35.0 31.0 38.5 2.0 40.0 66-67 30.845632195574545 35.0 30.0 38.0 2.0 40.0 68-69 30.334813373228613 35.0 30.0 37.0 2.0 39.5 70-71 29.831118001581963 34.0 29.0 36.5 2.0 39.0 72-73 29.289207740039643 34.0 29.0 36.0 2.0 39.0 74-75 28.708465253631516 34.0 28.0 35.5 2.0 38.0 76-77 28.144758031980484 33.5 27.0 35.0 2.0 37.0 78-79 27.605758246167937 33.0 26.0 35.0 2.0 36.5 80-81 27.053029260440752 33.0 25.5 35.0 2.0 36.0 82-83 26.450970017879058 32.0 24.5 35.0 2.0 35.5 84-85 25.86254309025577 32.0 23.5 34.0 2.0 35.0 86-87 25.262694434993715 31.5 20.5 34.0 2.0 35.0 88-89 24.631613184916414 31.0 18.5 34.0 2.0 35.0 90-91 23.913033905422594 31.0 11.0 34.0 2.0 35.0 92-93 23.12087662154726 30.0 2.0 34.0 2.0 35.0 94-95 22.225631956061534 29.5 2.0 34.0 2.0 35.0 96-97 21.33495767000172 29.0 2.0 34.0 2.0 35.0 98 20.705134157716177 29.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 122858.0 3 22681.0 4 17623.0 5 15141.0 6 14277.0 7 14960.0 8 16730.0 9 19690.0 10 22005.0 11 24373.0 12 27473.0 13 33010.0 14 26647.0 15 25765.0 16 28949.0 17 32621.0 18 37454.0 19 37024.0 20 39169.0 21 42513.0 22 46608.0 23 51591.0 24 58200.0 25 66306.0 26 75704.0 27 87460.0 28 101579.0 29 119189.0 30 143509.0 31 175272.0 32 221382.0 33 290153.0 34 399210.0 35 575643.0 36 802648.0 37 869112.0 38 374637.0 39 14503.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.34686981248761 16.637086441525547 12.963062692520513 25.052981053466333 2 16.464836157939075 18.206838411652527 38.372388337180205 26.955937093228194 3 20.826286177202142 21.288049241107228 26.964413187483228 30.921251394207406 4 14.255399309661518 14.075782445162249 33.57582133857779 38.09299690659845 5 16.283622414871214 35.27676174195045 32.12025891511276 16.31935692806558 6 36.59415293184393 32.08373261856856 15.961115413372687 15.360999036214826 7 32.45596117072343 29.566882768958575 18.378384323732337 19.598771736585658 8 28.60668694441554 33.255344509004225 18.29837745281889 19.839591093761353 9 27.12046510805987 16.389698822503785 18.395094452985564 38.09474161645078 10-11 27.37826200797994 24.496069965713996 25.32695307157845 22.79871495472761 12-13 27.307443592539983 21.42548391710861 26.14052133490055 25.126551155450848 14-15 24.389890225156584 23.16713279552532 23.479935089179726 28.96304189013837 16-17 25.00553713987483 26.220311014470788 24.137855540340418 24.636296305313966 18-19 25.00172123700024 25.509105564717483 25.496101754227784 23.993071444054497 20-21 25.45965950565542 24.709251547098702 25.495793679565132 24.335295267680742 22-23 25.265142437263666 24.351923445209266 25.39062050920908 24.992313608317986 24-25 24.97049140262497 24.599855954037313 25.465860596042234 24.96379204729548 26-27 24.904406496978538 24.873950190774373 25.433422711129992 24.788220601117096 28-29 24.96545597523205 24.877789213854236 25.415206208964236 24.74154860194948 30-31 25.1481124435668 24.87491510158099 25.1785899324103 24.798382522441912 32-33 24.967428865900015 24.838735081301163 25.187747990350225 25.006088062448594 34-35 25.105711037312467 24.78308836283702 25.37003790853384 24.741162691316674 36-37 25.102618300225675 24.763593158766813 25.286755349319073 24.847033191688435 38-39 25.089990678822797 24.84441749751124 25.261239294986876 24.804352528679082 40-41 25.242447766033056 24.78250511966081 25.270584551088454 24.70446256321768 42-43 25.21112435321376 24.674399725617054 25.16672958721652 24.94774633395267 44-45 25.045169937550078 24.82126678323828 25.195178833874003 24.93838444533764 46-47 25.15139991265409 24.719939517000384 25.24151855587563 24.887142014469898 48-49 25.167983324948512 24.878068224568963 25.01071247346301 24.943235977019512 50-51 24.968640084878995 25.09359622244265 25.013686658990824 24.924077033687535 52-53 25.14700304005279 24.941518264561722 24.957200959014543 24.954277736370944 54-55 25.14624172827166 24.851477641231746 25.095593960100615 24.906686670395974 56-57 25.011928628560515 24.94031244865262 25.134496212197842 24.91326271058902 58-59 25.128192327117834 24.882271043832002 25.093452554261287 24.89608407478888 60-61 25.199199531086258 24.83539667221232 25.11534370232661 24.85006009437481 62-63 25.050213050182258 24.98717040777576 25.09703119288364 24.86558534915834 64-65 25.08360520654138 24.824320488072786 25.106455980230084 24.98561832515575 66-67 25.08733001008664 24.914832259241678 25.03605756889049 24.96178016178119 68-69 24.954426006506285 24.883104384380022 25.127001239123132 25.03546836999056 70-71 24.91980292262395 24.76060227950859 25.227038463625018 25.09255633424244 72-73 25.083970637052566 24.84025904120513 25.02557729134956 25.050193030392748 74-75 24.946072116496257 25.025900272979555 25.01926436026794 25.008763250256244 76-77 25.121319956391975 24.804417211068472 24.988888434159225 25.085374398380328 78-79 24.995942191563664 24.799540318838233 25.119471149721594 25.08504633987651 80-81 25.00566745457186 24.88411423576828 25.113997434435266 24.99622087522459 82-83 25.168882567168875 24.81540627976662 24.997075733280838 25.018635419783664 84-85 25.06613714880661 24.923017463046804 24.89478001609061 25.116065372055967 86-87 25.028351339301295 24.855423451975465 25.15440658985496 24.96181861886828 88-89 25.004366523680073 24.683240882693624 25.096637998667603 25.2157545949587 90-91 25.030119192921983 24.745986096164092 25.07714437905554 25.146750331858385 92-93 25.090769901713227 24.817713291644043 25.095394303190943 24.996122503451783 94-95 25.16002987151953 24.737832843544417 25.0122895091819 25.089847775754155 96-97 25.126608259417093 24.621841671316787 25.050148792253 25.201401277013126 98 25.098719369584337 24.760991058856938 24.93610652068453 25.204183050874196 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 670.0 1 499.5 2 480.5 3 680.0 4 605.0 5 545.5 6 962.0 7 1997.5 8 2968.0 9 2962.5 10 2335.0 11 1979.5 12 2138.0 13 2521.0 14 2918.0 15 3359.5 16 3686.0 17 3802.0 18 3822.5 19 3684.0 20 3439.0 21 3111.0 22 2814.5 23 2692.0 24 2710.0 25 2855.0 26 3210.5 27 3833.5 28 4838.5 29 6382.0 30 8917.5 31 12685.5 32 18218.5 33 25487.0 34 34476.0 35 45697.0 36 58989.0 37 73692.5 38 88363.0 39 102391.0 40 117420.0 41 133507.0 42 149802.0 43 166841.0 44 182740.5 45 198015.0 46 213482.0 47 226539.0 48 234450.0 49 237612.5 50 238502.0 51 239232.0 52 242130.0 53 244780.0 54 242277.0 55 233406.0 56 219697.5 57 205207.5 58 189879.0 59 169661.5 60 147729.0 61 125480.5 62 102043.0 63 78467.0 64 58311.0 65 44592.0 66 34216.5 67 26161.0 68 20216.0 69 15591.0 70 11769.0 71 8934.5 72 7049.5 73 5485.0 74 4397.5 75 3365.0 76 2294.0 77 1444.5 78 885.0 79 530.5 80 316.5 81 200.0 82 121.0 83 67.0 84 46.5 85 40.0 86 27.0 87 22.5 88 21.5 89 15.5 90 11.5 91 10.0 92 9.0 93 8.5 94 7.0 95 7.5 96 7.0 97 4.5 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.47910455115948836 2 0.049394650496528136 3 0.0581702501674137 4 0.05561806234366623 5 0.06580718142462731 6 0.06523784721779134 7 0.044231378206946705 8 0.020790514656527544 9 0.012937629044996839 10-11 0.01520514976532633 12-13 0.01120017810344567 14-15 0.01640271482108476 16-17 0.015450552440686664 18-19 0.05602052273125718 20-21 0.08449704918007041 22-23 0.10072307407489572 24-25 0.07120604028255467 26-27 0.08659769608115486 28-29 0.08856091748403754 30-31 0.0594168957582442 32-33 0.034101155768072086 34-35 0.4005953272582101 36-37 0.6272492382210152 38-39 0.5770791152703484 40-41 0.5717784174825652 42-43 0.5449215486911301 44-45 0.5294709962504435 46-47 0.5194683832027561 48-49 0.5100154721478761 50-51 0.5240034246434152 52-53 0.6039556162758122 54-55 0.5748312267640476 56-57 0.5315716431515279 58-59 0.510251058716222 60-61 0.5229825495139162 62-63 0.5351152577837311 64-65 0.5535302745427706 66-67 0.5800337634816868 68-69 0.533662473945598 70-71 0.4828346718249655 72-73 0.46610802547240504 74-75 0.4471531228275728 76-77 0.4613864779984722 78-79 0.4554281010407233 80-81 0.4525323494714713 82-83 0.47160504540047654 84-85 0.4395456398914024 86-87 0.44133217136802566 88-89 0.46815959183841743 90-91 0.4511875428104968 92-93 0.4464856275505927 94-95 0.45718518419630333 96-97 0.4517077964822606 98 0.44622059266120356 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 5093669.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.415389638271016 #Duplication Level Percentage of deduplicated Percentage of total 1 70.79219903694673 35.69016297797704 2 14.855490094960258 14.978906428097943 3 5.639590972008906 8.529665287629138 4 2.7805679792428566 5.607336723569141 5 1.6063202687386697 4.049163111615613 6 0.9641144175841512 2.9163722411027826 7 0.6518519870217364 2.3004360338527414 8 0.47103284494153136 1.899784352812048 9 0.3482186128790402 1.5800019342835565 >10 1.757656222337836 15.659301650604348 >50 0.09600333004439279 3.2989991358803676 >100 0.036133529837280284 3.0128841436857816 >500 6.252989594114825E-4 0.1995313222570409 >1k 1.5632359768645907E-4 0.1673357760825631 >5k 3.908089942042727E-5 0.11011888055002912 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5589 0.1097244442071128 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.88966420864803E-5 2 0.0 0.0 0.0 1.9632214028826764E-5 5.88966420864803E-5 3 0.0 0.0 0.0 1.9632214028826764E-5 5.88966420864803E-5 4 0.0 0.0 0.0 3.926442805765353E-5 5.88966420864803E-5 5 0.0 0.0 0.0 5.88966420864803E-5 5.88966420864803E-5 6 0.0 0.0 0.0 5.88966420864803E-5 5.88966420864803E-5 7 0.0 0.0 0.0 5.88966420864803E-5 5.88966420864803E-5 8 0.0 0.0 0.0 5.88966420864803E-5 5.88966420864803E-5 9 0.0 0.0 0.0 1.177932841729606E-4 5.88966420864803E-5 10-11 0.0 3.926442805765353E-5 0.0 1.3742549820178735E-4 5.88966420864803E-5 12-13 0.0 3.926442805765353E-5 0.0 1.3742549820178735E-4 3.141154244612282E-4 14-15 0.0 4.908053507206691E-5 0.0 1.3742549820178735E-4 3.239315314756416E-4 16-17 0.0 5.88966420864803E-5 0.0 1.570577122306141E-4 3.730120665477085E-4 18-19 0.0 5.88966420864803E-5 0.0 2.159543543170944E-4 4.122764946053621E-4 20-21 0.0 5.88966420864803E-5 0.0 2.552187823747479E-4 4.122764946053621E-4 22-23 0.0 5.88966420864803E-5 0.0 2.748509964035747E-4 4.122764946053621E-4 24-25 0.0 6.871274910089368E-5 0.0 3.33747638490055E-4 4.220926016197755E-4 26-27 0.0 7.852885611530706E-5 0.0 4.1227649460536203E-4 4.61357029677429E-4 28-29 0.0 7.852885611530706E-5 0.0 0.0011975650557584326 4.908053507206692E-4 30-31 0.0 7.852885611530706E-5 0.0 0.0038871783777076996 5.10437564749496E-4 32-33 0.0 7.852885611530706E-5 0.0 0.00949217548293774 5.88966420864803E-4 34-35 0.0 9.816107014413383E-5 0.0 0.016677565817488336 5.88966420864803E-4 36-37 0.0 1.177932841729606E-4 0.0 0.02710227146679535 5.88966420864803E-4 38-39 0.0 1.3742549820178735E-4 0.0 0.04465347080856648 5.88966420864803E-4 40-41 9.816107014413382E-6 1.4724160521620072E-4 0.0 0.063520028490269 5.88966420864803E-4 42-43 1.9632214028826764E-5 1.766899262594409E-4 0.0 0.08101233118995364 5.88966420864803E-4 44-45 1.9632214028826764E-5 2.159543543170944E-4 0.0 0.1001242915470165 6.184147419080431E-4 46-47 1.9632214028826764E-5 2.650348893891613E-4 0.0 0.12071848406325578 6.576791699656967E-4 48-49 1.9632214028826764E-5 3.141154244612282E-4 0.0 0.13985007663434745 7.067597050377636E-4 50-51 1.9632214028826764E-5 3.33747638490055E-4 0.0 0.1598945671577796 7.263919190665904E-4 52-53 1.9632214028826764E-5 3.533798525188818E-4 0.0 0.18064581738624946 7.852885611530706E-4 54-55 1.9632214028826764E-5 3.533798525188818E-4 0.0 0.2012007454744311 8.147368821963107E-4 56-57 1.9632214028826764E-5 3.533798525188818E-4 0.0 0.22220721448527575 8.343690962251375E-4 58-59 1.9632214028826764E-5 3.631959595332951E-4 0.0 0.24466646733425357 8.441852032395508E-4 60-61 1.9632214028826764E-5 3.730120665477085E-4 0.0 0.2685294234862925 8.441852032395508E-4 62-63 1.9632214028826764E-5 3.730120665477085E-4 0.0 0.29148929779300536 9.619784874125114E-4 64-65 1.9632214028826764E-5 3.828281735621219E-4 0.0 0.31505777073461194 9.816107014413383E-4 66-67 1.9632214028826764E-5 4.122764946053621E-4 0.0 0.33937226780931384 0.001020875129498992 68-69 1.9632214028826764E-5 4.220926016197755E-4 0.0 0.3649923071169328 0.001050323450542232 70-71 1.9632214028826764E-5 4.417248156486022E-4 0.0 0.3909460940630418 0.001099403985614299 72-73 1.9632214028826764E-5 4.515409226630156E-4 0.0 0.4159477186287527 0.0012270133768016729 74-75 1.9632214028826764E-5 4.515409226630156E-4 0.0 0.44268679413601475 0.0012760939118737398 76-77 1.9632214028826764E-5 4.515409226630156E-4 0.0 0.4698675944589254 0.0013251744469458067 78-79 1.9632214028826764E-5 4.515409226630156E-4 0.0 0.4980790860183495 0.0013742549820178734 80-81 1.9632214028826764E-5 4.61357029677429E-4 0.0 0.5272034755301139 0.0014331516241043538 82-83 1.9632214028826764E-5 4.711731366918424E-4 0.0 0.5562395200787487 0.001511680480219661 84-85 1.9632214028826764E-5 4.711731366918424E-4 0.0 0.5861295659376375 0.001511680480219661 86 1.9632214028826764E-5 4.711731366918424E-4 1.9632214028826764E-5 0.609246497956581 0.001511680480219661 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9040 0.0 39.006847 1 GGTATCA 5295 0.0 31.906607 1 TCAACGC 11075 0.0 31.253334 4 CAACGCA 11160 0.0 31.015295 5 TATCAAC 11170 0.0 30.946486 2 ATCAACG 11455 0.0 30.016449 3 AACGCAG 12000 0.0 28.873917 6 GTACATG 17410 0.0 25.833088 1 TACATGG 18275 0.0 24.308577 2 ACGCAGA 14350 0.0 24.012257 7 ACATGGG 18160 0.0 23.427464 3 CGCAGAG 15490 0.0 22.034092 8 GAGTACA 13220 0.0 20.614405 1 CATGGGG 14020 0.0 20.077679 4 AGTACAT 12580 0.0 20.043573 2 GCAGAGT 17780 0.0 18.88661 9 GTATAGG 1050 0.0 17.975256 1 AGAGTAC 14290 0.0 17.664404 10-11 GTATATA 950 0.0 17.444536 1 GTACCTG 4240 0.0 16.828537 1 >>END_MODULE