##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921471_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5093669 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0409463198335 33.0 31.0 34.0 30.0 34.0 2 32.15847103531855 34.0 31.0 34.0 30.0 34.0 3 32.28300641443329 34.0 31.0 34.0 30.0 34.0 4 35.8051269134292 37.0 35.0 37.0 35.0 37.0 5 35.62145773508251 37.0 35.0 37.0 35.0 37.0 6 35.656565630785984 37.0 35.0 37.0 35.0 37.0 7 35.588216273966765 37.0 35.0 37.0 35.0 37.0 8 35.54205583440934 37.0 35.0 37.0 33.0 37.0 9 37.184517486314874 39.0 37.0 39.0 34.0 39.0 10-11 37.09915897558322 39.0 37.0 39.0 34.0 39.0 12-13 36.98613828264067 39.0 37.0 39.0 33.0 39.0 14-15 38.319270254898775 40.0 38.0 41.0 34.0 41.0 16-17 38.22978681967753 40.0 38.0 41.0 33.5 41.0 18-19 38.12002703748516 40.0 38.0 41.0 33.5 41.0 20-21 38.00478525400845 40.0 38.0 41.0 33.0 41.0 22-23 37.973962285338914 40.0 38.0 41.0 33.0 41.0 24-25 38.03524414326883 40.0 38.0 41.0 33.0 41.0 26-27 37.93697696100787 40.0 38.0 41.0 33.0 41.0 28-29 37.810546582434 40.0 38.0 41.0 33.0 41.0 30-31 37.678393806115004 40.0 38.0 41.0 33.0 41.0 32-33 37.52894917200156 40.0 38.0 41.0 32.0 41.0 34-35 37.39592943711105 40.0 37.0 41.0 32.0 41.0 36-37 37.315566441400094 40.0 37.0 41.0 32.0 41.0 38-39 37.29598497664453 40.0 37.0 41.0 32.0 41.0 40-41 37.140786631404595 40.0 37.0 41.0 31.5 41.0 42-43 36.9195612239429 40.0 36.5 41.0 31.0 41.0 44-45 36.729656167293165 39.5 36.0 41.0 31.0 41.0 46-47 36.48066403608087 39.0 36.0 41.0 30.0 41.0 48-49 36.17553054585997 39.0 35.0 40.0 30.0 41.0 50-51 35.90875751840177 39.0 35.0 40.0 29.0 41.0 52-53 35.60087061016333 38.0 35.0 40.0 28.0 41.0 54-55 35.276305645302045 38.0 34.5 40.0 28.0 41.0 56-57 34.899259453254615 38.0 34.0 40.0 27.0 41.0 58-59 34.5170608847964 37.0 34.0 40.0 26.0 41.0 60-61 34.095189636389804 37.0 33.0 39.5 26.0 41.0 62-63 33.648390089736885 36.0 33.0 39.0 25.5 40.0 64-65 33.14166831413662 35.5 32.0 39.0 24.0 40.0 66-67 32.619927600321105 35.0 32.0 38.0 22.5 40.0 68-69 32.12618262003283 35.0 31.0 37.5 22.0 39.5 70-71 31.58594757531359 35.0 31.0 37.0 20.0 39.0 72-73 31.052784544892887 34.0 30.0 36.0 18.5 39.0 74-75 30.547680463728604 34.0 30.0 35.5 18.0 38.0 76-77 29.242918120513917 32.5 28.5 34.5 17.0 36.0 78-79 30.17653139613116 34.0 30.0 35.0 17.5 37.0 80-81 30.228403435715983 34.0 30.0 35.0 17.5 36.5 82-83 29.91052382869794 34.0 30.0 35.0 13.0 36.0 84-85 29.452015236953955 34.0 29.5 35.0 7.0 35.5 86-87 28.95886599620038 34.0 29.0 35.0 4.0 35.0 88-89 28.43897021969822 33.0 29.0 35.0 2.0 35.0 90-91 27.997421603170523 33.0 27.0 35.0 2.0 35.0 92-93 27.589114644080723 33.0 27.0 35.0 2.0 35.0 94-95 27.121200749400877 33.0 26.5 34.0 2.0 35.0 96-97 26.391827776795076 32.0 25.0 34.0 2.0 35.0 98-99 25.422656438806683 32.0 22.0 34.0 2.0 35.0 100-101 21.817214860251028 28.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 29140.0 3 15834.0 4 9262.0 5 7053.0 6 6130.0 7 6255.0 8 7456.0 9 8853.0 10 10161.0 11 12252.0 12 14054.0 13 16101.0 14 18221.0 15 20167.0 16 22759.0 17 25967.0 18 26826.0 19 25493.0 20 26173.0 21 27323.0 22 30173.0 23 33584.0 24 38340.0 25 45029.0 26 54027.0 27 66161.0 28 79835.0 29 98617.0 30 121312.0 31 151634.0 32 197028.0 33 264594.0 34 381421.0 35 585538.0 36 928716.0 37 1165064.0 38 503617.0 39 13498.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.5949554808482 17.0130317729474 13.281359857727782 25.11065288847662 2 16.559124670252427 18.41717630258268 38.0396920176792 26.984007009485694 3 20.847802275148865 21.316488988355673 27.167808573519242 30.667900162976224 4 14.447587894369606 14.295191032354179 33.53477430020807 37.72244677306815 5 16.350694757334082 35.2097680857083 32.16460341103205 16.274933745925562 6 36.78834904384372 32.10774784891114 15.784421792776065 15.319481314469066 7 32.537228509983336 29.52214849280382 18.36394957583645 19.576673421376398 8 28.612242700006917 33.26677441873628 18.25684167992604 19.86414120133076 9 26.997984433150563 16.358947362008735 18.463276183357042 38.179792021483664 10-11 27.356042266001314 24.46965577565195 25.431889414614428 22.74241254373231 12-13 27.29406784798704 21.378314965292113 26.193282369932742 25.13433481678811 14-15 24.34820780105577 23.123479095874497 23.510832638713037 29.017480464356698 16-17 24.97456720052633 26.25476005773933 24.161071123462 24.609601618272336 18-19 24.99952864336096 25.507729659684436 25.480410614480153 24.01233108247445 20-21 25.446863362511362 24.71631124546357 25.485530005481866 24.351295386543203 22-23 25.245217471232944 24.321187406228535 25.447937651391996 24.985657471146524 24-25 24.979057521190175 24.558941233111614 25.482776793484817 24.97922445221339 26-27 24.900630521481126 24.79065744284365 25.500038290778203 24.808673744897018 28-29 24.940799673242083 24.894299507801247 25.44796173947536 24.71693907948131 30-31 25.139888442635872 24.81456351527224 25.234852183842104 24.810695858249783 32-33 24.939512473530726 24.811228950846345 25.200693327872674 25.048565247750254 34-35 25.061765541763343 24.75884515837375 25.42330269312193 24.756086606740975 36-37 25.041156030662947 24.75394490702404 25.343456144493032 24.86144291781998 38-39 25.035775688397287 24.844310958670636 25.305801630680225 24.814111722251848 40-41 25.190903699863725 24.74706536124824 25.325893155193203 24.736137783694836 42-43 25.155281637118147 24.681156543640927 25.204373742389052 24.95918807685187 44-45 24.982532063003365 24.722503523285592 25.278375150515842 25.0165892631952 46-47 25.03559988119463 24.739519231005254 25.329795355299233 24.895085532500875 48-49 25.099491423383334 24.870602987574724 25.11253738689449 24.91736820214745 50-51 24.941266184440085 25.040906536760517 25.08138113504792 24.936446143751482 52-53 25.099388136797966 24.8982706626167 25.038399125323537 24.963942075261794 54-55 25.147750989677633 24.77257317557652 25.142126120176073 24.937549714569776 56-57 25.018126124845562 24.89073770235931 25.131398453355143 24.959737719439982 58-59 25.103146585602854 24.894787096082624 25.071126013907058 24.93094030440746 60-61 25.192020989563236 24.817319550629215 25.116570236101172 24.87408922370638 62-63 25.06848247239446 24.928856965635944 25.077671719639994 24.9249888423296 64-65 25.082016763726834 24.787886325977848 25.105459240375406 25.024637669919912 66-67 25.08263046618529 24.89611903422175 25.01817192675452 25.003078572838444 68-69 24.977538829316025 24.87152662195092 25.128134508304424 25.022800040428635 70-71 24.950643301125243 24.743890028464406 25.230938300543077 25.07452836986727 72-73 25.129554055180627 24.823750023689183 24.99102265883855 25.055673262291645 74-75 24.908544741774428 25.043881238590192 24.97210771763739 25.075466301997988 76-77 25.09349765565392 24.815478562370714 24.999111374728404 25.09191240724697 78-79 24.944642022670124 24.81184771229432 25.183176676061553 25.060333588974004 80-81 24.963378016833445 24.911354081502594 25.15329778528078 24.97197011638318 82-83 25.11615110341216 24.862517174613668 25.019895696962095 25.00143602501207 84-85 25.023776911453083 24.96747027898341 24.92144316598989 25.08730964357362 86-87 25.010198847802922 24.913591115783927 25.11775480092763 24.958455235485523 88-89 24.95401581407971 24.765549483760346 25.0997323201796 25.180702381980336 90-91 24.987841112334756 24.8501812726001 25.08151467696676 25.080462938098385 92-93 25.096439400092375 24.940109313209263 25.077367090208785 24.886084196489573 94-95 25.025752294391257 24.876289344955676 24.983323468942288 25.11463489171078 96-97 24.98448718171481 24.794632471614804 25.07850158495306 25.14237876171732 98-99 24.939761922152297 24.828445174317373 25.055673099653575 25.176119803876755 100-101 25.473164620361455 24.384309499241695 25.10089018178934 25.04163569860751 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 203.0 1 183.5 2 290.0 3 433.5 4 368.5 5 330.5 6 698.5 7 1730.5 8 2555.0 9 2318.5 10 1578.0 11 1100.5 12 970.5 13 970.5 14 1055.0 15 1087.0 16 1143.0 17 1209.0 18 1283.5 19 1395.5 20 1373.5 21 1385.5 22 1471.5 23 1590.0 24 1728.0 25 1894.0 26 2190.5 27 2646.5 28 3329.5 29 4469.0 30 6362.0 31 9250.5 32 13673.5 33 19678.0 34 27129.5 35 36893.5 36 48899.5 37 62258.0 38 76413.0 39 90538.0 40 105561.5 41 120458.0 42 136008.5 43 151384.5 44 167368.0 45 183939.0 46 198552.5 47 212353.5 48 226551.5 49 235781.0 50 236896.5 51 238215.5 52 239995.0 53 241543.0 54 242059.0 55 234235.5 56 219920.5 57 203952.0 58 188308.5 59 169813.0 60 148180.0 61 127252.5 62 103976.5 63 79139.0 64 58905.5 65 44972.5 66 34669.0 67 26797.0 68 20411.0 69 15544.5 70 12180.0 71 9354.5 72 6972.0 73 5435.0 74 4138.5 75 3205.0 76 2346.0 77 1463.5 78 877.0 79 448.0 80 240.0 81 131.0 82 71.0 83 38.0 84 21.0 85 10.5 86 6.5 87 2.0 88 1.5 89 1.5 90 2.5 91 3.0 92 1.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.31566636936950554 2 0.0 3 0.005654077640302109 4 0.05915186086885505 5 3.926442805765353E-4 6 0.0655715948562814 7 0.07631041593004963 8 0.10689740538696174 9 0.09380271862973429 10-11 0.09894635870528688 12-13 0.097856770826687 14-15 0.06592497470880028 16-17 0.03571099731843589 18-19 0.03893068041916348 20-21 0.027966088884063725 22-23 0.04256264001449643 24-25 0.03426802958731712 26-27 0.020790514656527544 28-29 0.023833507830995693 30-31 0.0028663032482087077 32-33 0.005173088396595853 34-35 0.008176817143006348 36-37 0.010827166036897961 38-39 0.01619657657378208 40-41 0.020594192516239278 42-43 0.003573062953246471 44-45 0.015048092053095716 46-47 0.025649487628662166 48-49 0.0027386938570213336 50-51 0.006890907124118194 52-53 0.0025227395027042393 54-55 0.004270006551269821 56-57 0.003769385093534739 58-59 0.0013448066609746336 60-61 0.0055068360350859075 62-63 0.014920482661908341 64-65 0.006881091017103781 66-67 0.039735601194345375 68-69 0.06316664863775011 70-71 0.012603881406506782 72-73 0.03303120010350103 74-75 0.05212352824653506 76-77 0.30627235495671196 78-79 0.07543678240576684 80-81 0.034984605399369297 82-83 0.029202918367879815 84-85 0.01999540998836006 86-87 0.11945220625839645 88-89 0.5297065828187894 90-91 0.13457882716760747 92-93 0.049443731031600206 94-95 0.008510564781496404 96-97 0.005899480315662443 98-99 0.010699556645710588 100-101 0.007528954080055064 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 5093669.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.97261466512272 #Duplication Level Percentage of deduplicated Percentage of total 1 67.3490097940952 31.635590851356092 2 16.39742754137017 15.404600908001035 3 6.318177181262509 8.90343906364245 4 3.15306363340618 5.92430572266401 5 1.7639232202475343 4.1428042861774905 6 1.1290287976522804 3.1820060794768428 7 0.7269892568083952 2.390401035802128 8 0.5466967477254827 2.0543820535667923 9 0.40491949008629363 1.7118114460399303 >10 2.0502498130273157 17.033458675509063 >50 0.11503604652034471 3.690644492688633 >100 0.04460056070743057 3.46932410043024 >500 6.688897692009719E-4 0.2074667595869403 >1k 2.0902732164368893E-4 0.24976452505829244 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.926442805765353E-5 2 0.0 0.0 0.0 0.0 3.926442805765353E-5 3 0.0 0.0 0.0 0.0 3.926442805765353E-5 4 0.0 0.0 0.0 0.0 3.926442805765353E-5 5 0.0 0.0 0.0 0.0 3.926442805765353E-5 6 0.0 0.0 0.0 0.0 5.88966420864803E-5 7 0.0 0.0 0.0 1.9632214028826764E-5 5.88966420864803E-5 8 0.0 0.0 0.0 1.9632214028826764E-5 7.852885611530706E-5 9 0.0 0.0 0.0 1.9632214028826764E-5 7.852885611530706E-5 10-11 0.0 0.0 0.0 2.9448321043240146E-5 7.852885611530706E-5 12-13 0.0 0.0 0.0 3.926442805765353E-5 1.668738192450275E-4 14-15 0.0 0.0 0.0 5.88966420864803E-5 2.0613824730268102E-4 16-17 0.0 0.0 0.0 1.079771771585472E-4 2.257704613315078E-4 18-19 0.0 0.0 0.0 2.355865683459212E-4 2.748509964035747E-4 20-21 0.0 0.0 0.0 2.552187823747479E-4 3.631959595332951E-4 22-23 0.0 0.0 0.0 2.552187823747479E-4 4.220926016197755E-4 24-25 0.0 0.0 0.0 3.239315314756416E-4 4.711731366918424E-4 26-27 0.0 0.0 0.0 4.515409226630156E-4 4.711731366918424E-4 28-29 0.0 0.0 0.0 0.0012270133768016729 4.908053507206692E-4 30-31 0.0 0.0 0.0 0.0038871783777076996 4.908053507206692E-4 32-33 0.0 0.0 0.0 0.00943327884085126 5.202536717639093E-4 34-35 0.0 0.0 0.0 0.016579404747344203 5.693342068359762E-4 36-37 0.0 1.9632214028826764E-5 0.0 0.026827420470391775 5.693342068359762E-4 38-39 0.0 1.9632214028826764E-5 0.0 0.0441528493508314 5.693342068359762E-4 40-41 0.0 1.9632214028826764E-5 0.0 0.06273473992911593 5.693342068359762E-4 42-43 0.0 5.88966420864803E-5 0.0 0.08006016880955555 5.791503138503895E-4 44-45 0.0 9.816107014413383E-5 0.0 0.0990936003105031 5.987825278792164E-4 46-47 0.0 9.816107014413383E-5 0.0 0.11958963175659824 6.478630629512833E-4 48-49 0.0 1.27609391187374E-4 0.0 0.13847582165232958 7.165758120521769E-4 50-51 0.0 1.3742549820178735E-4 0.0 0.15826509339338696 7.46024133095417E-4 52-53 0.0 1.3742549820178735E-4 0.0 0.178829837588583 8.343690962251375E-4 54-55 0.0 1.3742549820178735E-4 0.0 0.1989921213961881 9.030818453260312E-4 56-57 0.0 1.3742549820178735E-4 0.0 0.21956668169839855 9.128979523404445E-4 58-59 0.0 1.3742549820178735E-4 0.0 0.24138788759143948 9.22714059354858E-4 60-61 0.0 1.3742549820178735E-4 0.0 0.26459316457351273 9.22714059354858E-4 62-63 0.0 1.570577122306141E-4 0.0 0.28684627917518785 0.0010405073435278186 64-65 0.0 1.766899262594409E-4 0.0 0.3100122917292034 0.0011092200926287122 66-67 0.0 1.8650603327385429E-4 0.0 0.3338261673461703 0.0011975650557584326 68-69 0.0 1.9632214028826765E-4 0.0 0.3583566187751894 0.0012466455908304995 70-71 0.0 2.0613824730268102E-4 0.0 0.3833386111268714 0.0012859100188881531 72-73 0.0 2.159543543170944E-4 0.0 0.407525498810386 0.001492048266190834 74-75 0.0 2.159543543170944E-4 0.0 0.4335970790406679 0.0016000254433493812 76-77 0.0 2.159543543170944E-4 0.0 0.46030670622688674 0.0016196576573782081 78-79 0.0 2.159543543170944E-4 0.0 0.4878507025093307 0.0016491059784214483 80-81 0.0 2.355865683459212E-4 0.0 0.5157775269653367 0.001688370406479102 82-83 0.0 2.355865683459212E-4 0.0 0.5438712252405878 0.001796347583637649 84-85 0.0 2.355865683459212E-4 0.0 0.5728778214681794 0.0018356120116953026 86-87 0.0 2.355865683459212E-4 0.0 0.6026893384709529 0.0019043247607961962 88-89 0.0 2.355865683459212E-4 0.0 0.6344149963415369 0.0019730375098970902 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8535 0.0 39.685753 1 GGTATCA 5280 0.0 31.037952 1 TCAACGC 10750 0.0 30.577082 4 CAACGCA 10945 0.0 30.058863 5 TATCAAC 11280 0.0 29.264997 2 ATCAACG 11360 0.0 28.934326 3 AACGCAG 11695 0.0 28.295233 6 GTACATG 17380 0.0 26.341602 1 TACATGG 18060 0.0 25.142761 2 ACATGGG 18295 0.0 24.041645 3 ACGCAGA 14090 0.0 23.352009 7 CGCAGAG 15245 0.0 21.520514 8 CATGGGG 14055 0.0 21.460573 4 GAGTACA 13375 0.0 19.910704 1 AGTACAT 12565 0.0 19.165417 2 GTACCTG 4610 0.0 18.704506 1 GCAGAGT 17360 0.0 18.323387 9 AGAGTAC 14185 0.0 17.186586 10-11 TACCTGG 4880 0.0 16.546339 2 ATGGGGG 7080 0.0 16.495174 5 >>END_MODULE