##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921470_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4010423 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97823346814039 33.0 31.0 34.0 30.0 34.0 2 32.0927735054382 34.0 31.0 34.0 30.0 34.0 3 32.21803061672048 34.0 31.0 34.0 30.0 34.0 4 35.751423976972006 37.0 35.0 37.0 35.0 37.0 5 35.55718361878535 37.0 35.0 37.0 33.0 37.0 6 35.59318705283707 37.0 35.0 37.0 35.0 37.0 7 35.524594288432915 37.0 35.0 37.0 33.0 37.0 8 35.474498575337314 37.0 35.0 37.0 33.0 37.0 9 37.101774301613574 39.0 37.0 39.0 34.0 39.0 10-11 37.01748369186991 39.0 37.0 39.0 33.5 39.0 12-13 36.90049528441264 39.0 37.0 39.0 33.0 39.0 14-15 38.21699805731216 40.0 38.0 41.0 33.0 41.0 16-17 38.12776333070103 40.0 38.0 41.0 33.0 41.0 18-19 38.02070429977087 40.0 38.0 41.0 33.0 41.0 20-21 37.90928463157128 40.0 38.0 41.0 33.0 41.0 22-23 37.8778388214909 40.0 38.0 41.0 33.0 41.0 24-25 37.935033287012374 40.0 38.0 41.0 33.0 41.0 26-27 37.831736328063144 40.0 38.0 41.0 33.0 41.0 28-29 37.70064192729794 40.0 38.0 41.0 33.0 41.0 30-31 37.5609484336191 40.0 38.0 41.0 32.0 41.0 32-33 37.40595717708581 40.0 37.0 41.0 32.0 41.0 34-35 37.27094099550097 40.0 37.0 41.0 32.0 41.0 36-37 37.18115021781992 40.0 37.0 41.0 31.5 41.0 38-39 37.15342957588264 40.0 37.0 41.0 31.0 41.0 40-41 36.99089460139243 40.0 37.0 41.0 31.0 41.0 42-43 36.76235249997319 40.0 36.0 41.0 30.5 41.0 44-45 36.567376433857476 39.0 36.0 41.0 30.0 41.0 46-47 36.3073375302306 39.0 35.5 41.0 30.0 41.0 48-49 35.99339895068425 39.0 35.0 40.0 29.0 41.0 50-51 35.725106428922835 39.0 35.0 40.0 28.5 41.0 52-53 35.414426109166044 38.0 35.0 40.0 28.0 41.0 54-55 35.09430987703791 38.0 34.0 40.0 27.5 41.0 56-57 34.72060740226156 38.0 34.0 40.0 26.5 41.0 58-59 34.33699063664855 37.0 34.0 40.0 26.0 41.0 60-61 33.91988613171229 37.0 33.0 39.5 25.5 41.0 62-63 33.48376655031153 36.0 33.0 39.0 24.5 40.0 64-65 32.9771045348583 35.5 32.0 39.0 23.0 40.0 66-67 32.451588149180274 35.0 31.5 38.0 22.0 40.0 68-69 31.956080942085162 35.0 31.0 37.5 20.5 39.5 70-71 31.410535995828866 35.0 31.0 37.0 19.0 39.0 72-73 30.864426395918834 34.0 30.0 36.0 18.0 39.0 74-75 30.350941534097526 34.0 29.5 36.0 14.5 38.0 76-77 29.05115146207769 32.5 28.0 34.5 12.5 36.0 78-79 29.98952591783959 34.0 30.0 35.0 13.0 37.0 80-81 30.030883899279452 34.0 30.0 35.0 12.0 36.5 82-83 29.70943264588299 34.0 30.0 35.0 7.5 36.0 84-85 29.231845867630422 34.0 29.0 35.0 4.5 36.0 86-87 28.721339868637298 34.0 29.0 35.0 2.0 35.0 88-89 28.193774696584377 33.0 28.0 35.0 2.0 35.0 90-91 27.738775435907883 33.0 27.0 35.0 2.0 35.0 92-93 27.31504369987904 33.0 26.0 34.5 2.0 35.0 94-95 26.834592011865084 32.5 25.5 34.0 2.0 35.0 96-97 26.085213205689275 32.0 24.5 34.0 2.0 35.0 98-99 25.091215939066778 32.0 20.5 34.0 2.0 35.0 100-101 21.504656117322288 28.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 25372.0 3 13258.0 4 7747.0 5 6016.0 6 5096.0 7 5296.0 8 6160.0 9 7281.0 10 8587.0 11 10039.0 12 11959.0 13 13952.0 14 15644.0 15 17268.0 16 19634.0 17 22555.0 18 23288.0 19 21669.0 20 21535.0 21 22741.0 22 24513.0 23 27465.0 24 31294.0 25 36742.0 26 43687.0 27 53003.0 28 64328.0 29 79062.0 30 97429.0 31 121722.0 32 156981.0 33 211682.0 34 302678.0 35 460813.0 36 720292.0 37 895197.0 38 387324.0 39 11114.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.24565077529114 17.233831049867373 13.668402320920602 24.852115853920882 2 16.287434018805495 18.655438590891784 38.405524803742644 26.65160258656007 3 20.574686703979992 21.832883021606236 27.281110472459503 30.311319801954273 4 14.20524970110914 14.558105580826275 34.083562699218994 37.15308201884559 5 16.091607796826302 35.40017569315388 32.33903542314098 16.169181086878844 6 36.08564255369689 32.636121697480945 15.945360192465943 15.332875556356221 7 32.08684175525112 29.94120099885686 18.62795177199273 19.344005473899287 8 28.32693521698139 33.67806362604081 18.3677152521625 19.6272859048153 9 26.972039074263716 16.61155380822822 18.541930656385034 37.87447646112304 10-11 27.03573285384356 24.818625122645035 25.535800619046988 22.60984140446442 12-13 27.05061151719737 21.70691677548026 26.409498437464705 24.832973269857664 14-15 24.072526380414175 23.3578495494548 23.85804223835511 28.711581831775916 16-17 24.558307368532382 26.56955569197244 24.53498457078444 24.337152368710733 18-19 24.646665993988048 25.791620711034604 26.02956933892613 23.532143956051222 20-21 25.087781457189024 24.88887874566954 25.94711998875599 24.076219808385442 22-23 24.847999692669138 24.583812394464154 25.853348297419444 24.714839615447268 24-25 24.50503989763059 24.96753562600243 25.92974325332189 24.59768122304509 26-27 24.60932833429229 25.020232847969442 25.94522004734175 24.42521877039652 28-29 24.588341807053578 25.201579765828523 25.872568715698268 24.33750971141963 30-31 24.75163199368423 25.047035380830113 25.74126388712606 24.4600687383596 32-33 24.523446105016784 24.971890408376446 25.776875799368458 24.727787687238308 34-35 24.719834527218936 25.012858204644267 25.885881984311805 24.381425283824996 36-37 24.642259573608 25.196985881904354 25.66784675942903 24.492907785058613 38-39 24.755039368272154 25.037994148377436 25.73831096994684 24.46865551340357 40-41 24.755861012893263 25.033154369362432 25.722603143289845 24.488381474454457 42-43 24.78442890991597 24.95941677858742 25.7184664005837 24.537687910912908 44-45 24.706416772094524 25.00331059682766 25.65069126009919 24.639581370978622 46-47 24.724603027430643 25.09258463683016 25.65020621959753 24.532606116141668 48-49 24.7435198434631 25.181068102003827 25.53068030687476 24.54473174765831 50-51 24.754298345098487 25.241312789453158 25.36113380354042 24.64325506190794 52-53 24.783979451039436 25.305844950950977 25.44593336524264 24.46424223276695 54-55 24.81771436928567 25.004173671098755 25.51920281448191 24.658909145133663 56-57 24.727206851004908 25.20148877644988 25.471520268071522 24.599784104473684 58-59 24.769472872106192 25.171355589279205 25.497472305575492 24.561699233039114 60-61 24.901311191830146 25.09268537667574 25.409813684158163 24.596189747335952 62-63 24.661963074364756 25.19083664871667 25.526672740054913 24.620527536863662 64-65 24.81747920500419 24.984243145440974 25.500930823325106 24.69734682622973 66-67 24.75438414219135 25.270379808281753 25.386460436361887 24.58877561316502 68-69 24.85312047034384 25.198196140357137 25.343581768437645 24.605101620861376 70-71 24.679830356754316 25.07973614098649 25.506325586301752 24.73410791595744 72-73 24.944555003942853 25.063956767931185 25.262814207537826 24.728674020588137 74-75 24.68952604533414 25.201794505092185 25.26877971533157 24.839899734242106 76-77 24.771522263284833 25.042745591917498 25.439420183072308 24.746311961725358 78-79 24.72695472419233 24.998814691043606 25.509071481366696 24.76515910339737 80-81 24.652833077890982 25.2620284787563 25.381632620227418 24.703505823125305 82-83 24.850017721267044 25.213222634235795 25.221852554568656 24.71490708992851 84-85 24.745042540607454 25.215970163901268 25.308634354784264 24.730352940707014 86-87 24.74426717718572 25.173591498794252 25.403345044864107 24.678796279155925 88-89 24.736899036638665 25.01691168609103 25.359532356313963 24.88665692095634 90-91 24.696341061789447 25.07388761591873 25.40818897252457 24.821582349767258 92-93 24.733976104095685 25.347234046268767 25.380464034836603 24.538325814798945 94-95 24.74399538762779 25.14994698365421 25.328796105019247 24.777261523698755 96-97 24.69236548728155 25.197614980012204 25.328207068131565 24.78181246457468 98-99 24.76748600851241 25.13785753339597 25.350649091558598 24.744007366533022 100-101 25.18286863806286 24.661163421833614 25.43434496582271 24.721622974280812 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 334.0 1 267.0 2 362.0 3 533.0 4 416.0 5 372.0 6 757.0 7 1911.5 8 2843.5 9 2584.5 10 1777.5 11 1163.5 12 1048.0 13 1092.5 14 1075.5 15 1105.0 16 1187.0 17 1258.0 18 1358.0 19 1402.5 20 1396.0 21 1459.5 22 1582.0 23 1716.0 24 1886.0 25 2117.5 26 2474.0 27 3050.5 28 3958.0 29 5380.5 30 7768.0 31 11185.5 32 15913.5 33 21708.0 34 28227.5 35 36161.0 36 46051.0 37 56550.0 38 66862.0 39 77159.5 40 87557.5 41 97781.5 42 109161.5 43 123793.0 44 139043.0 45 153107.0 46 162707.0 47 172009.5 48 184382.0 49 189558.5 50 186913.0 51 183626.5 52 182282.0 53 180709.0 54 178513.5 55 172591.5 56 159821.5 57 147006.0 58 137231.5 59 126770.5 60 110916.0 61 93367.5 62 76786.0 63 58490.0 64 43043.0 65 32560.0 66 25059.5 67 19562.0 68 14975.0 69 11297.5 70 8771.5 71 6928.0 72 5335.5 73 4161.5 74 3126.5 75 2252.5 76 1620.0 77 989.5 78 595.0 79 338.5 80 183.5 81 96.0 82 57.5 83 26.5 84 13.5 85 7.0 86 4.5 87 2.5 88 1.0 89 0.5 90 1.0 91 1.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3166498895503043 2 0.0 3 0.005934536082602758 4 0.056627443040297744 5 5.485705622573977E-4 6 0.06605288270090212 7 0.07585234774486382 8 0.10712086979353551 9 0.09465335701495828 10-11 0.09829387074630283 12-13 0.09858062354021009 14-15 0.06651418067370948 16-17 0.036654487569017034 18-19 0.039260197739739676 20-21 0.0293360575679922 22-23 0.04273863380496272 24-25 0.03523319111225923 26-27 0.021294511825809895 28-29 0.024137104739325503 30-31 0.0035906436802302403 32-33 0.005635315775916905 34-35 0.008415571125539626 36-37 0.010659723425683526 38-39 0.014836340206506895 40-41 0.0192124371917875 42-43 0.0036155787057873946 44-45 0.014262834618692342 46-47 0.024523597635461396 48-49 0.0030545406307514195 50-51 0.006857132028217473 52-53 0.002456100017379713 54-55 0.004101811704151906 56-57 0.003740253833573167 58-59 0.0012218162523005677 60-61 0.005398433033123938 62-63 0.014462314823149578 64-65 0.006570379234310197 66-67 0.03918539266306821 68-69 0.061377565408935665 70-71 0.011931409729098402 72-73 0.03165501494480757 74-75 0.05175264554387404 76-77 0.30065407065538974 78-79 0.07552819241262082 80-81 0.03402384237273724 82-83 0.02782748852178436 84-85 0.01953659252403051 86-87 0.12034890085160592 88-89 0.5315524073146399 90-91 0.13350212683300489 92-93 0.04975784349930169 94-95 0.008452973663875357 96-97 0.005635315775916905 98-99 0.009861802607854582 100-101 0.007580247769374951 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4010423.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.66371109841134 #Duplication Level Percentage of deduplicated Percentage of total 1 70.27935837977641 34.903337507549296 2 15.647480749622074 15.542239267343675 3 5.801552941670387 8.643799476517696 4 2.7257999962874346 5.414933741106793 5 1.4580556600694754 3.620622753354694 6 0.917295598403031 2.733378215455949 7 0.6213636874519756 2.160145866246093 8 0.42485259053917906 1.687980505275955 9 0.3166458175818745 1.4153225764415827 >10 1.6480449014387066 14.768457950838746 >50 0.10781721876448956 3.6572240904529276 >100 0.04941707627300443 4.262356739072604 >500 0.001711369433711655 0.5670030057489339 >1k 6.040126883340317E-4 0.6231983045951457 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4997 0.12460032270910075 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4961015334292668E-4 2 0.0 0.0 0.0 0.0 1.4961015334292668E-4 3 0.0 0.0 0.0 0.0 1.4961015334292668E-4 4 0.0 0.0 0.0 0.0 1.4961015334292668E-4 5 0.0 0.0 0.0 0.0 1.4961015334292668E-4 6 0.0 0.0 0.0 0.0 1.4961015334292668E-4 7 0.0 0.0 0.0 0.0 1.4961015334292668E-4 8 0.0 0.0 0.0 2.4935025557154443E-5 1.7454517890008113E-4 9 0.0 0.0 0.0 2.4935025557154443E-5 1.7454517890008113E-4 10-11 0.0 0.0 0.0 7.480507667146334E-5 1.7454517890008113E-4 12-13 0.0 0.0 0.0 8.727258945004056E-5 5.735055878145522E-4 14-15 0.0 0.0 0.0 1.2467512778577223E-4 6.607781772645929E-4 16-17 0.0 0.0 0.0 1.2467512778577223E-4 7.480507667146333E-4 18-19 0.0 0.0 0.0 1.2467512778577223E-4 7.480507667146333E-4 20-21 0.0 0.0 0.0 1.3714264056434946E-4 7.979208178289423E-4 22-23 0.0 0.0 0.0 2.742852811286989E-4 8.9766092005756E-4 24-25 0.0 0.0 0.0 3.4909035780016225E-4 0.0010472710734004867 26-27 0.0 0.0 0.0 5.361030494788206E-4 0.00112207615007195 28-29 0.0 0.0 0.0 9.974010222861779E-4 0.00112207615007195 30-31 0.0 0.0 0.0 0.003229085809651501 0.0011594786884076818 32-33 0.0 0.0 0.0 0.007492975179924911 0.0012218162523005677 34-35 0.0 2.4935025557154443E-5 0.0 0.013626991466984904 0.0012218162523005677 36-37 0.0 3.740253833573166E-5 0.0 0.02368827427929672 0.0012218162523005677 38-39 0.0 6.233756389288612E-5 0.0 0.03760201854018891 0.0013215563545291855 40-41 0.0 9.974010222861779E-5 0.0 0.05346069479453913 0.00134649138008634 42-43 0.0 1.4961015334292668E-4 0.0 0.0684217101288318 0.0013838939184220717 44-45 0.0 1.4961015334292668E-4 0.0 0.08515311227768244 0.0014462314823149578 46-47 0.0 1.620776661215039E-4 0.0 0.10202165706709741 0.001508569046207844 48-49 0.0 1.7454517890008113E-4 0.0 0.11874059170316947 0.0015459715845435756 50-51 0.0 1.7454517890008113E-4 0.0 0.13640705731041342 0.0016457116867721934 52-53 0.0 1.7454517890008113E-4 0.0 0.15346261479150702 0.0017080492506650795 54-55 0.0 1.7454517890008113E-4 0.0 0.1719893387804728 0.0017454517890008112 56-57 0.0 1.7454517890008113E-4 0.0 0.19022930997553128 0.001807789352893697 58-59 0.0 1.7454517890008113E-4 0.0 0.20898044919451142 0.0018202568656722744 60-61 0.0 2.2441523001439E-4 0.0 0.2268214599806554 0.0018202568656722744 62-63 0.0 2.2441523001439E-4 0.0 0.24579701442964993 0.0019199969679008922 64-65 0.0 2.2441523001439E-4 0.0 0.2653710094920162 0.0019324644806794694 66-67 0.0 2.2441523001439E-4 0.0 0.28622915837057583 0.001957399506236624 68-69 0.0 2.2441523001439E-4 0.0 0.3079475656308574 0.001969867019015201 70-71 0.0 2.2441523001439E-4 0.0 0.3306384388878679 0.0020072695573509327 72-73 0.0 2.2441523001439E-4 0.0 0.3534539872726643 0.0022316847873653225 74-75 0.0 2.2441523001439E-4 0.0 0.3752970696607315 0.002368827427929672 76-77 0.0 2.4935025557154447E-4 0.0 0.3982871632244279 0.002368827427929672 78-79 0.0 2.4935025557154447E-4 0.0 0.42172608724815314 0.002393762453486827 80-81 0.0 2.4935025557154447E-4 0.0 0.4457260493469143 0.002418697479043981 82-83 0.0 2.4935025557154447E-4 0.0 0.4707358799807402 0.0025433726068297535 84-85 0.0 2.4935025557154447E-4 0.0 0.4969425918413095 0.0025558401196083304 86-87 0.0 2.4935025557154447E-4 0.0 0.5231493037018788 0.0027303852985084117 88-89 0.0 2.4935025557154447E-4 0.0 0.5512884800431276 0.0028675279390727613 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7260 0.0 42.192123 1 GGTATCA 4310 0.0 33.49056 1 TCAACGC 9360 0.0 31.9678 4 TATCAAC 9635 0.0 31.350363 2 ATCAACG 9715 0.0 30.799652 3 CAACGCA 9710 0.0 30.75124 5 AACGCAG 10405 0.0 28.880428 6 GTACATG 14165 0.0 26.030434 1 ACGCAGA 12330 0.0 24.256924 7 TACATGG 14680 0.0 24.005737 2 ACATGGG 14940 0.0 22.666632 3 CGCAGAG 13155 0.0 22.48306 8 GTACCTG 3830 0.0 21.518122 1 CATGGGG 11890 0.0 20.252289 4 GAGTACA 11525 0.0 20.171394 1 AGTACAT 10245 0.0 19.794891 2 GCAGAGT 14995 0.0 19.343817 9 TACCTGG 4190 0.0 18.929523 2 GTATAGG 1025 0.0 18.590588 1 GTGTAGC 2135 0.0 17.850449 1 >>END_MODULE