##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921469_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4457262 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.7877845188369 33.0 31.0 34.0 30.0 34.0 2 31.897728246623153 34.0 31.0 34.0 30.0 34.0 3 32.027989828733425 34.0 31.0 34.0 30.0 34.0 4 35.57568009239753 37.0 35.0 37.0 33.0 37.0 5 35.357441406854704 37.0 35.0 37.0 33.0 37.0 6 35.39918564356324 37.0 35.0 37.0 33.0 37.0 7 35.324871187738125 37.0 35.0 37.0 33.0 37.0 8 35.274995501722806 37.0 35.0 37.0 33.0 37.0 9 36.86988895873745 39.0 37.0 39.0 33.0 39.0 10-11 36.76898788987499 39.0 37.0 39.0 33.0 39.0 12-13 36.6444967785156 39.0 37.0 39.0 33.0 39.0 14-15 37.88712050133019 40.0 38.0 41.0 33.0 41.0 16-17 37.7927191625711 40.0 38.0 41.0 33.0 41.0 18-19 37.688833862582 40.0 38.0 41.0 32.0 41.0 20-21 37.564257609267756 40.0 38.0 41.0 32.0 41.0 22-23 37.52493200983025 40.0 38.0 41.0 32.0 41.0 24-25 37.57241497134339 40.0 38.0 41.0 32.0 41.0 26-27 37.44487164990525 40.0 38.0 41.0 32.0 41.0 28-29 37.305024923372244 40.0 37.0 41.0 32.0 41.0 30-31 37.164526787969834 40.0 37.0 41.0 31.0 41.0 32-33 36.987510045404555 40.0 37.0 41.0 31.0 41.0 34-35 36.81420735420085 40.0 36.5 41.0 30.0 41.0 36-37 36.69726358917201 40.0 36.0 41.0 30.0 41.0 38-39 36.64772589091689 40.0 36.0 41.0 30.0 41.0 40-41 36.48624166584778 39.5 36.0 41.0 30.0 41.0 42-43 36.22621095641226 39.0 35.5 41.0 30.0 41.0 44-45 35.99175704726355 39.0 35.0 40.0 29.0 41.0 46-47 35.69367147365355 39.0 35.0 40.0 28.0 41.0 48-49 35.321921058264024 38.0 35.0 40.0 27.0 41.0 50-51 35.01572837764529 38.0 34.0 40.0 26.0 41.0 52-53 34.697063690669296 38.0 34.0 40.0 26.0 41.0 54-55 34.35294683148534 38.0 34.0 40.0 24.0 41.0 56-57 33.93828980661222 37.5 33.0 40.0 23.5 41.0 58-59 33.52491484682749 37.0 33.0 39.5 22.5 41.0 60-61 33.04864914828879 36.0 32.0 39.0 21.5 40.5 62-63 32.60383784933441 36.0 31.5 39.0 19.5 40.0 64-65 32.06705439348192 35.0 31.0 38.5 18.0 40.0 66-67 31.5003960951813 35.0 30.5 38.0 14.5 40.0 68-69 30.965234038295257 34.5 30.0 37.0 10.0 39.5 70-71 30.373785296893026 34.0 29.0 36.5 7.5 39.0 72-73 29.79266778573932 34.0 29.0 36.0 7.0 39.0 74-75 29.255295739851057 34.0 28.0 35.5 4.0 38.0 76-77 28.047080360095503 31.5 26.5 34.5 2.0 36.0 78-79 28.969762266611205 33.5 29.0 35.0 2.0 37.0 80-81 28.96828479007965 34.0 29.0 35.0 2.0 36.0 82-83 28.58918804862716 34.0 29.0 35.0 2.0 36.0 84-85 28.05528023706033 33.0 27.5 35.0 2.0 35.5 86-87 27.513872305464652 33.0 26.0 35.0 2.0 35.0 88-89 26.92858541858208 32.5 25.5 35.0 2.0 35.0 90-91 26.38665788549114 32.0 24.5 34.0 2.0 35.0 92-93 25.90048509600737 32.0 24.0 34.0 2.0 35.0 94-95 25.335792354140278 32.0 21.5 34.0 2.0 35.0 96-97 24.48625692185023 31.0 16.5 34.0 2.0 35.0 98-99 23.4050341891502 31.0 2.0 34.0 2.0 35.0 100-101 19.870071133354962 25.5 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 35905.0 3 18079.0 4 10724.0 5 8003.0 6 7156.0 7 7092.0 8 8533.0 9 10024.0 10 12038.0 11 14210.0 12 16783.0 13 19778.0 14 22045.0 15 25037.0 16 27979.0 17 33683.0 18 33988.0 19 30239.0 20 30654.0 21 32090.0 22 34415.0 23 37662.0 24 42780.0 25 49360.0 26 57886.0 27 69553.0 28 83704.0 29 100916.0 30 122115.0 31 151976.0 32 193292.0 33 254184.0 34 353120.0 35 515441.0 36 760938.0 37 869240.0 38 346750.0 39 9890.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.06006904902301 17.337021349381754 13.26497450047488 24.337935101120358 2 16.242706845592654 19.22155350078142 38.19169705527744 26.344042598348494 3 21.427577801630523 22.091413550353423 27.492115730486322 28.988892917529736 4 13.969728588130288 14.547307162522067 34.78219974175196 36.70076450759569 5 15.423798059287508 35.68943843809686 32.70298654163831 16.183776960977326 6 35.35922678399967 33.11020218299897 16.188289554593048 15.342281478408317 7 31.691325928631876 30.023034071520804 18.91645338614772 19.369186613699604 8 28.184080440021468 33.227078659003574 18.33381620703828 20.25502469393668 9 26.505557925939232 17.158069659338437 19.091733848330378 37.244638566391956 10-11 27.046123926119975 24.756332677954454 25.69865222512545 22.49889117080012 12-13 27.41829898765145 21.72961834197075 26.353389343110905 24.498693327266892 14-15 23.856413659625584 23.57830096898296 24.490215599073213 28.075069772318244 16-17 24.208312666503577 26.701517861751817 24.899744367213465 24.19042510453114 18-19 24.15325155398346 26.35296718539059 26.12532642349823 23.368454837127718 20-21 24.808455569692704 25.020946709349666 26.01807403381164 24.152523687145987 22-23 24.33518829817833 24.831008987977462 26.142019897244666 24.691782816599538 24-25 24.559272604121816 24.99787633026728 26.146363654624082 24.296487410986817 26-27 24.524657683181868 24.841591831408582 26.62227770935387 24.01147277605568 28-29 24.0939413721424 25.799879312616003 26.140734774774856 23.96544454046674 30-31 24.39379590547351 25.15058487306043 25.966829260412723 24.488789961053335 32-33 24.25684244771582 25.21539932858613 26.119715841048237 24.408042382649814 34-35 24.7251518750657 25.105351389500775 26.18573952283334 23.98375721260019 36-37 24.500348123398357 25.07105509324838 26.375053766722097 24.053543016631167 38-39 24.315577944248147 25.344588165350263 26.33015637441405 24.009677515987544 40-41 24.442590902114112 25.406690973652772 25.98809962991985 24.16261849431326 42-43 24.25585537438689 25.419363639494506 25.76074181294235 24.56403917317625 44-45 24.448230860746396 25.01148864576242 25.860436739073556 24.679843754417632 46-47 24.714142267470493 25.430743183539263 25.880586561384924 23.974527987605324 48-49 24.64707646876564 25.36548767849783 25.812131895725653 24.175303957010872 50-51 24.01533210759938 25.626971442059276 26.122178728074974 24.235517722266366 52-53 24.53568138111589 25.847181029041096 25.440598301672402 24.176539288170613 54-55 24.287298931268115 25.262213325471645 25.771057948987874 24.679429794272366 56-57 24.50272628196391 25.314379209246418 25.694000160419016 24.488894348370653 58-59 25.059591844243762 25.26127696216152 25.459731349006343 24.219399844588374 60-61 24.66491144759354 25.33541949298333 26.05196754269442 23.94770151672871 62-63 24.2193483097408 25.502130003713624 25.971953735668613 24.306567950876964 64-65 24.275575510476987 25.79088833367419 25.666329626338463 24.267206529510364 66-67 24.538216558722585 25.441622831977007 25.383873599881312 24.636287009419096 68-69 24.297411085623512 25.507469602335103 25.638046772960276 24.55707253908111 70-71 24.716498413504052 25.286115641766276 25.59068112856283 24.406704816166844 72-73 24.784125099996892 25.053876849612866 25.856242145706343 24.305755904683902 74-75 24.20611547207251 25.9866597230484 25.48674165475103 24.320483150128062 76-77 24.40201492640595 25.315750678680132 25.54301443008928 24.73921996482464 78-79 24.44814702638041 25.341904453777985 25.77278051455012 24.437168005291486 80-81 24.696498612060115 25.35935675267514 25.587614708291362 24.356529926973387 82-83 24.59666546789431 25.288560962623553 25.795815592531106 24.31895797695103 84-85 24.395816120037466 25.55122564650559 25.750884918617107 24.302073314839838 86-87 24.409266828141988 25.65521436247627 25.614693917339864 24.320824892041877 88-89 24.21919736685122 25.537451981097586 25.39380969167089 24.849540960380303 90-91 24.500382126799604 25.19742094737793 25.492597613066625 24.809599312755847 92-93 24.775866964605374 25.638718264982142 25.602545872048715 23.98286889836377 94-95 24.658847286495583 25.397559949516197 25.574836628803816 24.368756135184405 96-97 24.125998233340415 25.41274969996628 26.087273073204635 24.373978993488667 98-99 24.463952995787107 25.65925221549491 25.40210537085868 24.474689417859302 100-101 24.809658415567785 24.764313214850205 25.75324694410705 24.67278142547496 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 254.0 1 212.5 2 397.0 3 606.5 4 439.5 5 336.0 6 626.5 7 1327.0 8 2028.0 9 2031.0 10 1460.5 11 1044.0 12 974.0 13 1081.5 14 1229.5 15 1331.0 16 1415.5 17 1569.5 18 1765.5 19 1947.5 20 2107.0 21 2315.5 22 2696.0 23 3149.5 24 3710.0 25 4551.0 26 5723.0 27 7405.0 28 9599.5 29 12665.0 30 16543.0 31 20791.5 32 26409.0 33 32716.5 34 39433.5 35 47445.5 36 56633.5 37 66542.0 38 76161.5 39 86578.0 40 98404.0 41 109336.0 42 120655.5 43 133778.0 44 146868.5 45 160396.5 46 171879.0 47 193884.5 48 232081.0 49 236727.0 50 210289.0 51 197693.0 52 194649.0 53 192481.5 54 189888.0 55 183077.5 56 170151.5 57 155884.0 58 144048.0 59 130488.0 60 113380.0 61 96685.5 62 79373.0 63 60778.0 64 45113.0 65 34308.0 66 26160.5 67 20015.0 68 15530.5 69 12038.0 70 9290.0 71 7110.5 72 5375.0 73 4211.0 74 3256.5 75 2429.0 76 1770.0 77 1113.0 78 674.5 79 385.0 80 231.0 81 120.0 82 58.0 83 30.5 84 16.5 85 12.0 86 7.5 87 2.0 88 1.5 89 1.0 90 0.5 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.31503645062821073 2 0.0 3 0.006416495148815574 4 0.05900483301183552 5 7.403648248633354E-4 6 0.06575785762649806 7 0.07684089470172496 8 0.10661253478032029 9 0.09337570912367278 10-11 0.09797494515691471 12-13 0.09757110979789835 14-15 0.06624021652754539 16-17 0.037063111838613036 18-19 0.039867524054004455 20-21 0.0294238929638868 22-23 0.04310942457499694 24-25 0.0343596584629757 26-27 0.021840762333468395 28-29 0.02514996874763027 30-31 0.0031633769789615237 32-33 0.005597606781921278 34-35 0.008783419058605933 36-37 0.01141956654107387 38-39 0.016747949750317574 40-41 0.02086482688251218 42-43 0.004072006536748345 44-45 0.015435484833514385 46-47 0.025923986519078304 48-49 0.0030287651926227356 50-51 0.007639218874726234 52-53 0.00252397099385228 54-55 0.0045768007355188 56-57 0.004139312429917739 58-59 0.0014919472985882364 60-61 0.006023877438660775 62-63 0.015637402513022567 64-65 0.007347560004325526 66-67 0.04019283587098986 68-69 0.06299831600655291 70-71 0.013124649168031854 72-73 0.03361929363811236 74-75 0.05231911429034237 76-77 0.3034710546519365 78-79 0.07432814135673424 80-81 0.034942976203777114 82-83 0.029491198857056193 84-85 0.020640473905280867 86-87 0.11640554223646714 88-89 0.5234379311783781 90-91 0.13147084465754985 92-93 0.04951470207495095 94-95 0.008682460218851842 96-97 0.005900483301183552 98-99 0.010544589929871746 100-101 0.007639218874726234 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4457262.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.25679742689267 #Duplication Level Percentage of deduplicated Percentage of total 1 72.44824062882151 37.85913034475101 2 15.2189814965754 15.90590466220337 3 5.218811345614996 8.181551018909158 4 2.37105955800475 4.956159160390076 5 1.3072539798677552 3.4156453205724246 6 0.7675525350260459 2.4065902402412407 7 0.5017198755153661 1.8352791729896605 8 0.3581001079217256 1.4970531838571213 9 0.26140669753532386 1.2294249155222778 >10 1.416430785620791 13.279213183601321 >50 0.09107659295916692 3.2664664974228588 >100 0.03699920627455468 3.243857454445778 >500 0.0012051153028534338 0.42962758270132784 >1k 9.038360798697593E-4 1.2254795434834747 >5k 2.1519906663565198E-4 0.7980337541409915 >10k+ 4.3039813327130395E-5 0.47058396476782505 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 20923 0.46941373426107774 No Hit GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT 8655 0.19417750179370205 No Hit CTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGC 7434 0.16678400327375864 No Hit GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT 7351 0.16492187356273874 No Hit GTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT 6347 0.14239683464871483 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5695 0.1277690205332332 No Hit ACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGC 4899 0.10991052354562061 No Hit GTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGG 4543 0.10192355755618585 No Hit TGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCT 4479 0.10048769850190542 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.2435297723131374E-5 0.0 3 0.0 0.0 0.0 2.2435297723131374E-5 0.0 4 0.0 0.0 0.0 2.2435297723131374E-5 0.0 5 0.0 0.0 0.0 2.2435297723131374E-5 0.0 6 0.0 0.0 0.0 2.2435297723131374E-5 0.0 7 0.0 0.0 0.0 4.487059544626275E-5 0.0 8 0.0 0.0 0.0 4.487059544626275E-5 0.0 9 0.0 0.0 0.0 4.487059544626275E-5 2.2435297723131374E-5 10-11 0.0 0.0 0.0 6.730589316939412E-5 2.2435297723131374E-5 12-13 0.0 3.365294658469706E-5 0.0 1.0095883975409119E-4 1.4582943520035393E-4 14-15 0.0 4.487059544626275E-5 0.0 1.3461178633878825E-4 1.9070003064661667E-4 16-17 0.0 4.487059544626275E-5 0.0 1.7948238178505102E-4 2.467882749544451E-4 18-19 0.0 6.730589316939412E-5 0.0 2.5800592381601084E-4 2.692235726775765E-4 20-21 0.0 8.97411908925255E-5 0.0 2.692235726775765E-4 3.1409416812383924E-4 22-23 0.0 8.97411908925255E-5 0.0 3.253118169854049E-4 3.701824124316677E-4 24-25 0.0 8.97411908925255E-5 0.0 4.2627065673949614E-4 3.814000612932334E-4 26-27 0.0 8.97411908925255E-5 0.0 5.272294964935873E-4 4.0383535901636477E-4 28-29 0.0 8.97411908925255E-5 0.0 0.001009588397540912 4.0383535901636477E-4 30-31 0.0 8.97411908925255E-5 0.0 0.0030512004903458668 4.0383535901636477E-4 32-33 0.0 8.97411908925255E-5 0.0 0.007123207027094212 4.2627065673949614E-4 34-35 0.0 8.97411908925255E-5 0.0 0.012395501992030086 4.935765499088903E-4 36-37 0.0 1.1217648861565688E-4 0.0 0.019328008988477682 4.935765499088903E-4 38-39 0.0 1.3461178633878825E-4 0.0 0.029771640078595334 4.935765499088903E-4 40-41 0.0 1.3461178633878825E-4 0.0 0.04055180063455996 5.160118476320217E-4 42-43 0.0 1.5704708406191962E-4 0.0 0.05124221999963206 5.160118476320217E-4 44-45 0.0 1.5704708406191962E-4 0.0 0.0633909337167077 5.833177408014157E-4 46-47 0.0 1.682647329234853E-4 0.0 0.07626879460978511 6.618412828323756E-4 48-49 0.0 1.79482381785051E-4 0.0 0.08881012603701555 6.954942294170726E-4 50-51 0.0 2.1313532836974804E-4 0.0 0.10182259871643175 7.852354203095981E-4 52-53 0.0 2.467882749544451E-4 0.0 0.11496968318218673 8.076707180327295E-4 54-55 0.0 2.692235726775765E-4 0.0 0.1282513794342805 8.076707180327295E-4 56-57 0.0 2.9165887040070787E-4 0.0 0.14324937596219384 8.525413134789923E-4 58-59 0.0 3.1409416812383924E-4 0.0 0.1577201429936136 9.086295577868206E-4 60-61 0.0 3.1409416812383924E-4 0.0 0.17250500419315715 9.198472066483863E-4 62-63 0.0 3.1409416812383924E-4 0.0 0.18717768890408507 9.871530998177805E-4 64-65 0.0 3.365294658469706E-4 0.0 0.20167089123322796 0.0010320236952640434 66-67 0.0 3.365294658469706E-4 0.0 0.21748777612803555 0.0010320236952640434 68-69 0.0 3.365294658469706E-4 0.0 0.23292326096154994 0.0010320236952640434 70-71 2.2435297723131374E-5 3.365294658469706E-4 0.0 0.24974973425389846 0.001043241344125609 72-73 2.2435297723131374E-5 3.365294658469706E-4 0.0 0.26549931325553666 0.0011442001838797003 74-75 2.2435297723131374E-5 3.365294658469706E-4 0.0 0.2825277042273934 0.0011666354816028315 76-77 2.2435297723131374E-5 3.365294658469706E-4 0.0 0.2989503421607256 0.001177853130464397 78-79 2.2435297723131374E-5 3.365294658469706E-4 0.0 0.3172911980493855 0.0012115060770490943 80-81 2.2435297723131374E-5 3.701824124316677E-4 0.0 0.33697817180143325 0.0012675943213569228 82-83 2.2435297723131374E-5 3.814000612932334E-4 0.0 0.3543879628345832 0.0013685531611110139 84-85 2.2435297723131374E-5 3.814000612932334E-4 0.0 0.3730653481890901 0.0013685531611110139 86-87 2.2435297723131374E-5 3.814000612932334E-4 0.0 0.39222509244464426 0.0014134237565572765 88-89 2.2435297723131374E-5 3.814000612932334E-4 0.0 0.41203546033416927 0.0014582943520035393 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 5640 0.0 36.57215 1 TACCTGG 5640 0.0 35.458694 2 TATCACG 430 0.0 28.72266 2 ACCTGGG 6960 0.0 27.710001 3 GTACATG 13120 0.0 24.32667 1 TACATGG 13645 0.0 22.350191 2 TATAACG 420 0.0 21.48939 2 ACATGGG 13735 0.0 20.820328 3 CCTGGGG 7830 0.0 18.746971 4 GAGTACA 10925 0.0 18.705853 1 AGTACAT 9875 0.0 18.568207 2 GTATACG 285 4.141839E-8 18.386097 1 AGAGTAC 14415 0.0 18.379633 10-11 CATGGGG 10520 0.0 17.430346 4 GTGTAGC 2520 0.0 17.202143 1 GTATAAC 965 0.0 16.783918 1 AGTACTT 8695 0.0 16.406338 12-13 GTACTTT 7530 0.0 16.292866 14-15 GAGTACT 7640 0.0 16.2175 12-13 TAACGCA 470 1.4551915E-11 16.171732 4 >>END_MODULE