##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921468_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4022167 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.622802335159133 31.0 31.0 34.0 28.0 34.0 2 30.723017467947006 31.0 31.0 34.0 27.0 34.0 3 30.858147361857426 31.0 31.0 34.0 27.0 34.0 4 34.37972863881584 37.0 35.0 37.0 31.0 37.0 5 34.37147264148903 37.0 35.0 37.0 31.0 37.0 6 34.47018758793456 37.0 35.0 37.0 32.0 37.0 7 34.36247997658973 37.0 35.0 37.0 31.0 37.0 8 34.34830751681867 37.0 35.0 37.0 31.0 37.0 9 35.828360433567276 39.0 37.0 39.0 31.0 39.0 10-11 35.70815495726558 39.0 37.0 39.0 30.0 39.0 12-13 35.5511474287368 39.0 35.0 39.0 30.0 39.0 14-15 36.6026556082828 40.0 37.0 41.0 30.0 41.0 16-17 36.46801040334725 40.0 36.5 41.0 30.0 41.0 18-19 36.28912461864462 40.0 36.0 41.0 29.5 41.0 20-21 36.17521313759473 39.0 36.0 41.0 29.0 41.0 22-23 36.21338994626528 39.5 36.0 41.0 29.0 41.0 24-25 36.08886913447403 39.0 36.0 41.0 29.0 41.0 26-27 35.82847678875591 39.0 36.0 41.0 27.0 41.0 28-29 35.60048687685021 39.0 35.5 40.0 27.0 41.0 30-31 35.35177231576909 39.0 35.0 40.0 26.5 41.0 32-33 35.0925199028285 38.5 35.0 40.0 25.0 41.0 34-35 34.681193868877145 38.0 34.5 40.0 24.5 41.0 36-37 34.30379394987826 38.0 34.0 40.0 23.0 41.0 38-39 34.071965062614254 38.0 33.5 40.0 21.5 41.0 40-41 33.80449854518721 38.0 33.0 40.0 19.5 41.0 42-43 33.52135242022521 38.0 33.0 40.0 18.0 41.0 44-45 33.198213052814566 38.0 32.5 40.0 15.5 41.0 46-47 32.91629872653224 37.5 32.0 40.0 14.5 41.0 48-49 32.706271892738414 37.0 32.0 40.0 12.0 41.0 50-51 31.943228612834822 36.0 30.5 39.0 11.0 40.0 52-53 32.45229598870459 37.0 31.5 39.0 13.0 40.0 54-55 32.889323963922934 37.0 33.0 40.0 10.5 41.0 56-57 32.730847575448756 37.0 32.0 40.0 8.0 41.0 58-59 32.39571019801018 36.5 32.0 39.5 7.5 41.0 60-61 31.93710790725497 36.0 31.0 39.0 4.0 40.5 62-63 31.44651403086943 35.5 31.0 39.0 2.0 40.0 64-65 30.901751966042184 35.0 30.0 38.5 2.0 40.0 66-67 30.409400703650544 35.0 29.5 38.0 2.0 40.0 68-69 29.882912121749296 34.5 29.0 37.0 2.0 39.5 70-71 29.356978961838234 34.0 28.5 36.5 2.0 39.0 72-73 28.793038802217808 34.0 28.0 36.0 2.0 39.0 74-75 28.194438097672226 33.5 26.5 35.5 2.0 38.0 76-77 27.606154344163233 33.0 26.0 35.0 2.0 37.0 78-79 27.03937678370888 33.0 25.5 35.0 2.0 36.5 80-81 26.452084411214155 32.0 24.5 35.0 2.0 36.0 82-83 25.820573834950164 32.0 22.5 34.5 2.0 35.5 84-85 25.189586981346125 31.5 20.0 34.0 2.0 35.0 86-87 24.558371022386687 31.0 17.5 34.0 2.0 35.0 88-89 23.89284594597887 31.0 9.5 34.0 2.0 35.0 90-91 23.135647401015422 30.0 2.0 34.0 2.0 35.0 92-93 22.29688635504195 29.5 2.0 34.0 2.0 35.0 94-95 21.361496427174707 29.0 2.0 34.0 2.0 35.0 96-97 20.44848423747696 29.0 2.0 33.5 2.0 34.0 98 19.80533379146117 27.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 105177.0 3 18877.0 4 14698.0 5 12657.0 6 11908.0 7 12345.0 8 14337.0 9 16992.0 10 18793.0 11 20574.0 12 23220.0 13 27334.0 14 23340.0 15 22587.0 16 25124.0 17 28398.0 18 32393.0 19 32251.0 20 34166.0 21 37233.0 22 40946.0 23 45378.0 24 50713.0 25 57049.0 26 65218.0 27 74590.0 28 86367.0 29 101625.0 30 121640.0 31 147185.0 32 184030.0 33 238376.0 34 321743.0 35 450583.0 36 606856.0 37 627630.0 38 259706.0 39 10128.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.4157181301082 16.682646619921453 13.025081325432852 24.87655392453749 2 16.270264704082713 18.55950655827982 38.63293680700545 26.53729193063202 3 20.66489855232529 22.060037282636113 26.958320958025446 30.316743207013154 4 14.103007379275246 14.317102377058927 33.90989155206561 37.66999869160022 5 16.05803226259054 35.18112008565677 32.12442322484604 16.636424426906654 6 35.854175814470715 32.293031581225655 16.511698201453616 15.341094402850011 7 32.04561593324255 29.62332033751811 18.85206533972553 19.47899838951381 8 28.413140529181103 33.113842097109455 18.592905343658373 19.88011203005107 9 27.167021366797727 16.659368770524555 18.64059216646066 37.53301769621705 10-11 27.03246420063385 24.636349406438633 25.630353182782684 22.70083321014483 12-13 27.14493725509795 21.67562915847063 26.3416697312446 24.83776385518682 14-15 24.184735681332366 23.302523414531226 23.9007065481117 28.612034356024708 16-17 24.71547606318831 26.358553621292856 24.44552333257908 24.480446982939753 18-19 24.720508544164346 25.63529152620836 25.881347240545427 23.76285268908187 20-21 25.19956316437595 24.860117300666378 25.792983806775133 24.147335728182544 22-23 24.970690334392735 24.509885899481347 25.666183626454874 24.85324013967104 24-25 24.66489546440197 24.81136919789864 25.803484619449424 24.720250718249968 26-27 24.747859420849892 24.962147498972975 25.7469788292237 24.543014250953433 28-29 24.692584645362423 25.106021704356984 25.677637535222892 24.5237561150577 30-31 24.87795965255566 25.036505138580225 25.5361342413971 24.54940096746702 32-33 24.694455546058045 25.059793277039656 25.500424403565635 24.74532677333666 34-35 24.818153650759424 25.03404452161161 25.66923861438017 24.478563213248794 36-37 24.859146149227733 24.95691503523644 25.600541443040242 24.58339737249558 38-39 24.824731660196914 25.022899129833064 25.57221575580128 24.58015345416874 40-41 24.961628606910953 25.000974908358614 25.531787511973874 24.50560897275656 42-43 24.912405482891952 24.89482410121278 25.489292226305242 24.703478189590022 44-45 24.814028718913374 25.01650440458955 25.486298970355044 24.683167906142035 46-47 24.970355331268244 25.00236107981049 25.435263189191705 24.592020399729563 48-49 24.918127967576215 25.115442782263802 25.28781218767492 24.678617062485063 50-51 24.78449288239333 25.274549821247778 25.286255918012845 24.654701378346044 52-53 24.87313274962979 25.20396032869708 25.2863671530974 24.63653976857573 54-55 24.84693211765653 25.017974164201362 25.36853286322186 24.766560854920247 56-57 24.801290789940406 25.16726782004655 25.353667223028715 24.677774166984328 58-59 24.929879230136777 25.084860684076922 25.344183242616243 24.64107684317006 60-61 24.945199808008812 25.036672965596747 25.424678063707397 24.593449162687048 62-63 24.752946203670383 25.213006277238016 25.382331774019427 24.651715745072167 64-65 24.829005676066792 25.048700203198692 25.400823791992522 24.721470328741994 66-67 24.828552057375312 25.178710355475737 25.294058971292344 24.698678615856608 68-69 24.720289641580166 25.17605006880074 25.373724924711503 24.729935364907586 70-71 24.743555752981802 24.993084600407293 25.41792429114188 24.84543535546902 72-73 24.839077577892795 25.067525485626614 25.29179050917313 24.801606427307465 74-75 24.647020218835667 25.29287593740212 25.311926402784014 24.7481774409782 76-77 24.846277472657814 25.065374525110762 25.226875572151954 24.861472430079473 78-79 24.826341160122702 24.95925549991448 25.409348949457346 24.805054390505475 80-81 24.740472441220135 25.14527438303098 25.304778133603868 24.80947504214502 82-83 24.919596601954357 25.05115898769887 25.242958365549633 24.786286044797144 84-85 24.871820221510035 25.11695772844736 25.191692337574246 24.81952971246836 86-87 24.782332707298394 25.097971659279704 25.39516036917961 24.724535264242295 88-89 24.81063599982519 24.9339027176865 25.30726152347774 24.94819975901057 90-91 24.8360675794581 24.979862691772592 25.27757775023446 24.906491978534852 92-93 24.878185068312614 25.07780288570713 25.318842336504705 24.725169709475555 94-95 24.962965894663455 24.93141589578088 25.253433138036304 24.852185071519365 96-97 24.895277320188043 24.94440362723183 25.279161644276847 24.88115740830328 98 24.899418005138333 25.000087386615867 25.18000394488152 24.920490663364284 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 535.0 1 413.0 2 515.5 3 756.5 4 609.0 5 507.0 6 893.0 7 1826.5 8 2628.5 9 2559.5 10 1980.5 11 1636.5 12 1765.0 13 2032.0 14 2325.0 15 2620.5 16 2879.5 17 3087.5 18 3084.0 19 2955.5 20 2823.0 21 2651.5 22 2467.0 23 2496.5 24 2647.5 25 2861.5 26 3381.5 27 4209.5 28 5481.5 29 7347.0 30 9960.5 31 13814.0 32 19392.0 33 26001.5 34 33645.5 35 43226.5 36 53272.0 37 64040.5 38 75718.5 39 86429.5 40 97111.0 41 108965.0 42 121374.0 43 133722.5 44 145495.0 45 157062.5 46 169984.5 47 182781.5 48 188592.0 49 187141.0 50 185704.0 51 185096.0 52 185258.5 53 185992.5 54 183537.5 55 176898.0 56 166431.5 57 154785.5 58 142207.0 59 127915.0 60 111801.5 61 94036.5 62 76315.0 63 58706.0 64 43886.5 65 33470.0 66 25555.5 67 19512.5 68 15175.5 69 11748.0 70 8802.5 71 6649.5 72 5250.0 73 3973.5 74 3091.5 75 2345.5 76 1599.5 77 1002.0 78 599.5 79 374.0 80 235.0 81 156.5 82 99.0 83 55.0 84 32.5 85 26.5 86 21.5 87 18.0 88 12.0 89 9.0 90 11.0 91 8.0 92 5.0 93 4.0 94 4.0 95 4.5 96 5.0 97 4.0 98 2.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.45229350248261696 2 0.04358347129793467 3 0.05134048387349406 4 0.04945095516919113 5 0.0597439141636834 6 0.06295114051703969 7 0.040823764900860655 8 0.018547215965920856 9 0.011436621104991414 10-11 0.013736376435886426 12-13 0.010094061236144595 14-15 0.014233620831755616 16-17 0.013351012029087802 18-19 0.053267305907487184 20-21 0.08115028540585212 22-23 0.09616706616110171 24-25 0.06650643794750442 26-27 0.08149835648296055 28-29 0.08195830754913956 30-31 0.054323950248709216 32-33 0.030580530345955304 34-35 0.3799320117737528 36-37 0.5957609418007755 38-39 0.547341768753013 40-41 0.541772631519278 42-43 0.5165126162091231 44-45 0.5023411509268512 46-47 0.491302325338555 48-49 0.48298591281764286 50-51 0.49672228925352924 52-53 0.574441588327884 54-55 0.5464964532800354 56-57 0.5041187996420835 58-59 0.48307293058691997 60-61 0.49475817388984594 62-63 0.50736331932513 64-65 0.5260099841702247 66-67 0.5499274396115328 68-69 0.5070276793579183 70-71 0.45799938192521594 72-73 0.44137898799328823 74-75 0.42304310089561176 76-77 0.43630709515542243 78-79 0.4309119934602417 80-81 0.4287614114481074 82-83 0.4470972985457839 84-85 0.41420458175903685 86-87 0.4176728614202245 88-89 0.4435917255549061 90-91 0.426710278315147 92-93 0.42299337645602486 94-95 0.43291340215361523 96-97 0.4272448160407064 98 0.42208590543356356 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4022167.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.5197251469677 #Duplication Level Percentage of deduplicated Percentage of total 1 74.71539085374755 41.48177964448329 2 13.817614844264966 15.343003566805042 3 4.821191865274416 8.030137417224966 4 2.1215050449271127 4.7114150796903465 5 1.194029898291784 3.314610588521083 6 0.7411444114256077 2.4688880409936536 7 0.503406993660744 1.9564312547574076 8 0.34216036609628003 1.519731958548105 9 0.2586227085453617 1.2922795525682536 >10 1.3749392073954536 13.653001949894467 >50 0.08006838869209022 3.044855856000099 >100 0.028934906134347217 2.5803677340969853 >500 7.65395314610145E-4 0.2785891786904041 >1k 2.2511622977969612E-4 0.3249081777259353 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4692 0.11665353527091243 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 2.4862219793459597E-5 9 0.0 0.0 0.0 0.0 4.972443958691919E-5 10-11 0.0 0.0 0.0 0.0 6.215554948364899E-5 12-13 0.0 0.0 0.0 0.0 1.9889775834767677E-4 14-15 0.0 0.0 0.0 0.0 2.2375997814113636E-4 16-17 0.0 0.0 0.0 1.2431109896729798E-5 2.4862219793459595E-4 18-19 0.0 2.4862219793459597E-5 0.0 2.4862219793459597E-5 2.7348441772805554E-4 20-21 0.0 2.4862219793459597E-5 0.0 2.4862219793459597E-5 3.232088573149747E-4 22-23 0.0 2.4862219793459597E-5 0.0 4.972443958691919E-5 3.356399672117045E-4 24-25 2.4862219793459597E-5 2.4862219793459597E-5 0.0 9.944887917383839E-5 3.480710771084343E-4 26-27 2.4862219793459597E-5 4.972443958691919E-5 0.0 1.6160442865748736E-4 4.475199562822727E-4 28-29 2.4862219793459597E-5 4.972443958691919E-5 0.0 4.599510661790025E-4 4.8481328597246214E-4 30-31 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.001964115363683308 4.972443958691919E-4 32-33 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.005867483871256464 5.469688354561111E-4 34-35 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.010728047840877816 5.718310552495707E-4 36-37 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.018348318207573183 5.718310552495707E-4 38-39 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.029436868235456163 5.718310552495707E-4 40-41 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.042327929198364964 5.718310552495707E-4 42-43 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.0547341768753013 5.966932750430304E-4 44-45 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.06735175342048204 6.464177146299494E-4 46-47 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.08123730317512923 7.210043740103283E-4 48-49 2.4862219793459597E-5 7.45866593803788E-5 0.0 0.09477478185266797 7.707288135972474E-4 50-51 2.4862219793459597E-5 9.944887917383839E-5 0.0 0.10781501613433753 7.955910333907071E-4 52-53 2.4862219793459597E-5 9.944887917383839E-5 0.0 0.1216135481197076 8.204532531841666E-4 54-55 2.4862219793459597E-5 9.944887917383839E-5 0.0 0.13640656889681607 8.204532531841666E-4 56-57 2.4862219793459597E-5 9.944887917383839E-5 0.0 0.1514855052015493 8.701776927710858E-4 58-59 2.4862219793459597E-5 1.1187998907056818E-4 0.0 0.16768324139698826 8.701776927710858E-4 60-61 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.18359506206480236 8.701776927710858E-4 62-63 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.20094889148063716 9.696265719449242E-4 64-65 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.21771845873132567 9.82057681841654E-4 66-67 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.2350847192570572 0.0010193510115318433 68-69 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.2528860686291743 0.0010193510115318433 70-71 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.27160732013364935 0.001044213231325303 72-73 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.2899929316709127 0.0011187998907056817 74-75 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.3092735831207406 0.0011436621104991415 76-77 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.32946170559302984 0.0011436621104991415 78-79 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.3509053701648887 0.0011436621104991415 80-81 2.4862219793459597E-5 1.2431109896729798E-4 0.0 0.3721128436487098 0.001168524330292601 82-83 3.72933296901894E-5 1.2431109896729798E-4 0.0 0.3937926993086065 0.0013176976490533586 84-85 4.972443958691919E-5 1.2431109896729798E-4 0.0 0.4154352616388131 0.0013176976490533586 86 4.972443958691919E-5 1.2431109896729798E-4 0.0 0.432876108823925 0.0013176976490533586 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 5285 0.0 34.225945 1 GTATCAA 9360 0.0 33.929787 1 TACCTGG 5400 0.0 33.290005 2 TCAACGC 11340 0.0 27.458252 4 TATCAAC 11445 0.0 27.24675 2 CAACGCA 11615 0.0 26.72918 5 ATCAACG 11770 0.0 26.338547 3 ACCTGGG 6820 0.0 25.484518 3 AACGCAG 12420 0.0 25.13754 6 GTACATG 12880 0.0 23.870884 1 TACATGG 13345 0.0 22.3022 2 ACGCAGA 14165 0.0 21.907003 7 CGCAGAG 14865 0.0 20.899208 8 AGTACAT 9355 0.0 20.882736 2 ACATGGG 13740 0.0 20.492891 3 GAGTACA 10610 0.0 20.345358 1 GGTATCA 6135 0.0 19.731 1 TATACCG 335 5.638867E-11 19.164583 5 TATAACG 350 1.05501385E-10 18.343473 2 GCAGAGT 16190 0.0 18.33997 9 >>END_MODULE