##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921468_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4022167 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.999928148184797 33.0 31.0 34.0 30.0 34.0 2 32.11227455249869 34.0 31.0 34.0 30.0 34.0 3 32.239100216375896 34.0 31.0 34.0 30.0 34.0 4 35.78127089203407 37.0 35.0 37.0 35.0 37.0 5 35.59192569577544 37.0 35.0 37.0 33.0 37.0 6 35.6297756905668 37.0 35.0 37.0 35.0 37.0 7 35.565158035457 37.0 35.0 37.0 33.0 37.0 8 35.51663841904128 37.0 35.0 37.0 33.0 37.0 9 37.14814775219428 39.0 37.0 39.0 34.0 39.0 10-11 37.06000459453822 39.0 37.0 39.0 34.0 39.0 12-13 36.94462301043194 39.0 37.0 39.0 33.0 39.0 14-15 38.256386171931695 40.0 38.0 41.0 33.5 41.0 16-17 38.163048799316385 40.0 38.0 41.0 33.0 41.0 18-19 38.056268175836564 40.0 38.0 41.0 33.0 41.0 20-21 37.94071268050283 40.0 38.0 41.0 33.0 41.0 22-23 37.90785464651269 40.0 38.0 41.0 33.0 41.0 24-25 37.96644271607818 40.0 38.0 41.0 33.0 41.0 26-27 37.862059432141926 40.0 38.0 41.0 33.0 41.0 28-29 37.72554707449989 40.0 38.0 41.0 33.0 41.0 30-31 37.585395633746685 40.0 38.0 41.0 32.5 41.0 32-33 37.42495189782026 40.0 37.0 41.0 32.0 41.0 34-35 37.28225904095976 40.0 37.0 41.0 32.0 41.0 36-37 37.188268910763774 40.0 37.0 41.0 31.5 41.0 38-39 37.157988591721825 40.0 37.0 41.0 31.0 41.0 40-41 36.993708242347964 40.0 37.0 41.0 31.0 41.0 42-43 36.75645317561404 39.5 36.0 41.0 30.5 41.0 44-45 36.55203463705013 39.0 36.0 41.0 30.0 41.0 46-47 36.28030946999466 39.0 35.5 40.5 30.0 41.0 48-49 35.951646711834684 39.0 35.0 40.0 29.0 41.0 50-51 35.673195568458496 38.5 35.0 40.0 28.5 41.0 52-53 35.36300108871661 38.0 35.0 40.0 28.0 41.0 54-55 35.03306936285838 38.0 34.0 40.0 27.0 41.0 56-57 34.64940739656011 38.0 34.0 40.0 26.0 41.0 58-59 34.25953832846821 37.0 33.5 40.0 26.0 41.0 60-61 33.82610294401003 36.5 33.0 39.0 25.5 41.0 62-63 33.37794228832368 36.0 32.5 39.0 24.0 40.0 64-65 32.85793193072291 35.5 32.0 39.0 22.5 40.0 66-67 32.32612768191873 35.0 31.0 38.0 21.5 40.0 68-69 31.81785415672696 35.0 31.0 37.5 20.0 39.5 70-71 31.26584027963036 34.5 30.5 37.0 18.5 39.0 72-73 30.711936625207258 34.0 30.0 36.0 17.5 39.0 74-75 30.187932773552166 34.0 29.0 35.5 13.5 38.0 76-77 28.9162191674289 32.5 28.0 34.5 12.0 36.0 78-79 29.86448934119344 34.0 29.5 35.0 12.0 37.0 80-81 29.90112270325921 34.0 30.0 35.0 10.5 36.5 82-83 29.561240122550856 34.0 29.5 35.0 7.0 36.0 84-85 29.063125673299993 34.0 29.0 35.0 3.5 35.5 86-87 28.5352215609148 33.0 29.0 35.0 2.0 35.0 88-89 27.986650976948496 33.0 27.0 35.0 2.0 35.0 90-91 27.503945385659023 33.0 26.5 35.0 2.0 35.0 92-93 27.062074001402728 32.5 25.5 34.0 2.0 35.0 94-95 26.553554464546103 32.0 25.0 34.0 2.0 35.0 96-97 25.75788175876337 32.0 23.5 34.0 2.0 35.0 98-99 24.717272927752624 32.0 17.5 34.0 2.0 35.0 100-101 21.099440301708007 27.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 23187.0 3 12401.0 4 7313.0 5 5449.0 6 4926.0 7 5122.0 8 5935.0 9 7139.0 10 8596.0 11 10113.0 12 11950.0 13 14002.0 14 15963.0 15 17428.0 16 20189.0 17 23596.0 18 24281.0 19 22183.0 20 22456.0 21 23370.0 22 25510.0 23 28266.0 24 32636.0 25 37880.0 26 45558.0 27 55258.0 28 67591.0 29 82880.0 30 102262.0 31 127722.0 32 164397.0 33 221383.0 34 314940.0 35 473506.0 36 727823.0 37 867856.0 38 351810.0 39 9290.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.711516160551604 17.185783123756494 13.401479266182623 24.70122144950928 2 16.41930829823824 18.83146572481948 38.303755164815385 26.4454708121269 3 20.699183996089427 22.24001639019403 27.177935298018337 29.88286431569821 4 14.291734204181704 14.645491479079043 33.9313201929956 37.13145412374365 5 16.074528373659234 35.15503912587957 32.24611936016246 16.524313140298734 6 35.778040550542386 32.5002917009887 16.403820648548948 15.317847099919964 7 32.114921354330725 29.65065389187707 18.819725286290737 19.414699467501467 8 28.4491072524091 33.19411775393114 18.58633759325872 19.770437400401047 9 27.083614848260655 16.64537729470438 18.692491632940865 37.578516224094095 10-11 27.007431421762895 24.739431131588663 25.64389873218001 22.609238714468432 12-13 27.141168433797002 21.70992102352123 26.41804899353829 24.73086154914348 14-15 24.080965403040743 23.3364779686452 24.028123588148308 28.55443304016575 16-17 24.67794891105135 26.4126412404964 24.558902861258687 24.350506987193565 18-19 24.678632484797326 25.677341256877252 25.989248099440093 23.65477815888533 20-21 25.194723965667855 24.819171788200112 25.97953873557966 24.00656551055238 22-23 24.92505840121936 24.460970176576634 25.92553993767884 24.688431484525168 24-25 24.616318035962195 24.790649968737394 25.95944118277607 24.633590812524343 26-27 24.649928207617503 24.94618679746292 26.00830125844313 24.395583736476446 28-29 24.604642429939545 25.127525073548245 25.85614385862821 24.411688637883998 30-31 24.828227843411916 24.965023994024925 25.76046551466506 24.446282647898094 32-33 24.576738852530816 24.98707407379321 25.75682401259785 24.679363061078124 34-35 24.722551950179945 24.980469109366524 25.897600447954837 24.3993784924987 36-37 24.767016845900418 25.018499409461054 25.791309753216886 24.423173991421645 38-39 24.757574996524976 25.037976622464008 25.804110998910122 24.400337382100894 40-41 24.892132934299998 24.93138557984376 25.741317978756072 24.435163507100167 42-43 24.80823444160771 24.96115460003006 25.652558587590086 24.57805237077215 44-45 24.70406086725595 24.98421028027623 25.68097206985074 24.630756782617087 46-47 24.803096590008327 25.016702114233386 25.685358652490958 24.494842643267333 48-49 24.804894609897374 25.088891082349157 25.503467504314337 24.602746803439135 50-51 24.69297540048768 25.30773321823045 25.452316300542854 24.546975080739024 52-53 24.802039936237076 25.24367638537858 25.389807006885608 24.564476671498735 54-55 24.818858956878213 25.040054659319082 25.45555648378271 24.68552990001999 56-57 24.770548109965848 25.250566846770557 25.41993403580604 24.55895100745755 58-59 24.87303328073251 25.133033176309887 25.405688099078173 24.58824544387943 60-61 24.908399817253393 25.07018650720886 25.495302355504307 24.526111320033444 62-63 24.713612796070827 25.215886823422313 25.483988437962463 24.586511942544398 64-65 24.78809871901977 25.0880798225723 25.458400465449337 24.665420992958587 66-67 24.795464191730225 25.20339792646846 25.353138197174896 24.64799968462642 68-69 24.691008206652864 25.230174241954025 25.417699438009027 24.66111811338408 70-71 24.731055395209854 25.03274429857579 25.4998486333801 24.73635167283426 72-73 24.915538366515925 25.02711762776994 25.365473996734817 24.691870008979315 74-75 24.620852995099344 25.30643251768486 25.305362912639012 24.767351574576782 76-77 24.788221200208902 25.13054814825158 25.31394203730788 24.76728861423164 78-79 24.704574835568057 25.058244088759913 25.51444383737235 24.72273723829968 80-81 24.672117030490575 25.23566947889523 25.37285499955544 24.719358491058756 82-83 24.805032316178032 25.145751695265737 25.327408182587092 24.72180780596914 84-85 24.762008729009427 25.203556904112318 25.278530448895086 24.75590391798317 86-87 24.739775332359258 25.19268249578717 25.376478846244794 24.691063325608773 88-89 24.743818619008596 25.05903899585346 25.359538674822286 24.837603710315662 90-91 24.729436293196 25.142064072443247 25.325537178509748 24.802962455851006 92-93 24.821990807646596 25.251262468603073 25.370780971957803 24.55596575179253 94-95 24.840231729726725 25.076479288524745 25.302619534514108 24.78066944723442 96-97 24.71191220380358 25.114689363445752 25.413884952849997 24.759513479900676 98-99 24.71401545267009 25.161542899888843 25.315629495461504 24.80881215197956 100-101 25.254617096887085 24.59421575398027 25.41201890412986 24.73914824500279 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 277.0 1 234.0 2 398.5 3 582.0 4 431.0 5 354.5 6 694.0 7 1612.5 8 2414.0 9 2293.5 10 1624.5 11 1134.5 12 1081.0 13 1182.0 14 1221.0 15 1225.0 16 1264.0 17 1401.0 18 1539.0 19 1575.0 20 1601.0 21 1667.0 22 1778.0 23 1925.5 24 2121.5 25 2467.0 26 2918.5 27 3578.0 28 4714.5 29 6305.0 30 8692.5 31 12085.5 32 16745.0 33 22636.5 34 29185.5 35 36782.5 36 46611.5 37 57011.5 38 67275.0 39 77577.5 40 88067.5 41 98878.0 42 109629.0 43 121822.0 44 134711.5 45 147086.0 46 157932.0 47 169077.0 48 182211.0 49 187802.5 50 184872.5 51 183292.5 52 183263.5 53 182559.0 54 180910.0 55 174947.0 56 163974.0 57 151630.5 58 139705.0 59 126874.5 60 111143.5 61 94060.5 62 77188.0 63 59627.0 64 44379.5 65 33791.5 66 25792.0 67 19825.0 68 15334.0 69 11623.5 70 8783.0 71 6826.0 72 5188.0 73 3977.5 74 3053.0 75 2259.0 76 1641.0 77 1025.5 78 587.5 79 319.0 80 192.0 81 114.0 82 57.0 83 21.5 84 11.0 85 8.5 86 5.0 87 4.0 88 3.0 89 1.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.5 95 0.5 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.30682465447108487 2 0.0 3 0.006215554948364899 4 0.05417477692994845 5 5.221066156626515E-4 6 0.06563626025473333 7 0.07461152160017225 8 0.10387435429707419 9 0.09273607982960429 10-11 0.09675132832624801 12-13 0.09651513723821015 14-15 0.06521360251824453 16-17 0.03614966757969025 18-19 0.03917042728459559 20-21 0.028703432751549105 22-23 0.042340360308261694 24-25 0.03453362329311538 26-27 0.021108024604647196 28-29 0.024787633134079216 30-31 0.0030829152543889898 32-33 0.0052583594863167046 34-35 0.008279119191222045 36-37 0.010367545653872651 38-39 0.01526540295318419 40-41 0.019442255878485405 42-43 0.0033191063424268556 44-45 0.013997429743717753 46-47 0.024103922089759075 48-49 0.0027348441772805554 50-51 0.006414452706712576 52-53 0.0020014086933734976 54-55 0.004052541826333914 56-57 0.0033936930018072346 58-59 0.0012431109896729798 60-61 0.005084323947762487 62-63 0.013860687534853724 64-65 0.00614096828898452 66-67 0.03825052515223759 68-69 0.06067624740593815 70-71 0.01179712329199658 72-73 0.0312891036100689 74-75 0.049513110718674785 76-77 0.2902291227589506 78-79 0.07147888190619633 80-81 0.033178632314371834 82-83 0.02774623728950091 84-85 0.018609371515404507 86-87 0.11628060197401054 88-89 0.5220568912230646 90-91 0.13001697840989695 92-93 0.04646748879397598 94-95 0.008117514762564558 96-97 0.005370239475387273 98-99 0.010007043466867488 100-101 0.007321923729173851 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4022167.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.86503745379074 #Duplication Level Percentage of deduplicated Percentage of total 1 71.34732597936208 37.00431734147432 2 15.489508654054909 16.067278929667474 3 5.485796998248054 8.535632003340845 4 2.4910380205281677 5.1679112093404065 5 1.3453273491252873 3.488772667499602 6 0.8267353861506066 2.5727197060245217 7 0.57903020230934 2.1021996190754964 8 0.40505999705920437 1.6806761534806405 9 0.3018516449570167 1.4089992184065616 >10 1.5950428353231911 14.87437890199293 >50 0.0954784019617442 3.376781445728045 >100 0.036507740835497786 3.0189806779152004 >500 0.0010086145469939455 0.3284933819966272 >1k 2.88175537848248E-4 0.37285874405740577 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4979 0.12378899235163533 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.4862219793459597E-5 2 0.0 0.0 0.0 2.4862219793459597E-5 2.4862219793459597E-5 3 0.0 0.0 0.0 2.4862219793459597E-5 2.4862219793459597E-5 4 0.0 0.0 0.0 2.4862219793459597E-5 2.4862219793459597E-5 5 0.0 0.0 0.0 2.4862219793459597E-5 2.4862219793459597E-5 6 0.0 0.0 0.0 2.4862219793459597E-5 4.972443958691919E-5 7 0.0 0.0 0.0 4.972443958691919E-5 4.972443958691919E-5 8 0.0 0.0 0.0 4.972443958691919E-5 4.972443958691919E-5 9 0.0 0.0 0.0 4.972443958691919E-5 4.972443958691919E-5 10-11 0.0 0.0 0.0 4.972443958691919E-5 4.972443958691919E-5 12-13 0.0 0.0 0.0 4.972443958691919E-5 1.2431109896729798E-4 14-15 0.0 0.0 0.0 4.972443958691919E-5 1.4917331876075757E-4 16-17 0.0 0.0 0.0 8.701776927710859E-5 1.7403553855421716E-4 18-19 0.0 0.0 0.0 1.2431109896729798E-4 1.9889775834767677E-4 20-21 0.0 0.0 0.0 1.2431109896729798E-4 2.7348441772805554E-4 22-23 0.0 0.0 0.0 1.4917331876075757E-4 3.3563996721170454E-4 24-25 0.0 0.0 0.0 1.9889775834767677E-4 3.9779551669535354E-4 26-27 0.0 0.0 0.0 2.4862219793459595E-4 4.3508884638554296E-4 28-29 0.0 2.4862219793459597E-5 0.0 5.469688354561111E-4 4.475199562822727E-4 30-31 2.4862219793459597E-5 2.4862219793459597E-5 0.0 0.002075995352753876 4.475199562822727E-4 32-33 2.4862219793459597E-5 3.72933296901894E-5 0.0 0.0061036749592943305 4.723821760757323E-4 34-35 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.010989101148709142 4.972443958691919E-4 36-37 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.01841047375705683 5.221066156626515E-4 38-39 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.029412006015662698 5.469688354561111E-4 40-41 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.042129031440017284 5.469688354561111E-4 42-43 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.05424936358932883 5.593999453528409E-4 44-45 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.06676749125533574 5.966932750430304E-4 46-47 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.0805162988011189 6.837110443201389E-4 48-49 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.09390460415989689 7.210043740103283E-4 50-51 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.10680809623270243 7.210043740103283E-4 52-53 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.12044502378941502 7.210043740103283E-4 54-55 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.13486511126962158 7.210043740103283E-4 56-57 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.14979487425559407 7.707288135972476E-4 58-59 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.1657937126926853 8.080221432874369E-4 60-61 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.18133260006359758 8.204532531841666E-4 62-63 2.4862219793459597E-5 4.972443958691919E-5 0.0 0.19820161619345988 8.950399125645454E-4 64-65 2.4862219793459597E-5 6.215554948364899E-5 0.0 0.21458581903734977 9.074710224612752E-4 66-67 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.23160400848597285 9.19902132358005E-4 68-69 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.24894540679191093 9.19902132358005E-4 70-71 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.26710725835103316 9.19902132358005E-4 72-73 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.2850080566023241 0.0010193510115318433 74-75 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.30376660143648937 0.0010939376709122222 76-77 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.3233455995238388 0.0011312310006024117 78-79 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.3441552774909644 0.0011436621104991415 80-81 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.36487793768881305 0.0011809554401893308 82-83 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.38602325562315043 0.0013176976490533586 84-85 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.40687022691996627 0.0013176976490533586 86-87 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.4289851714262486 0.0013798531985370075 88-89 2.4862219793459597E-5 7.458665938037878E-5 0.0 0.4510628226028407 0.0014420087480206565 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9080 0.0 34.56002 1 GTACCTG 5235 0.0 33.20096 1 TACCTGG 5580 0.0 30.727459 2 TCAACGC 10945 0.0 28.294832 4 TATCAAC 11550 0.0 27.18148 2 CAACGCA 11435 0.0 27.153276 5 ATCAACG 11390 0.0 27.105293 3 GTACATG 12890 0.0 26.118063 1 AACGCAG 12125 0.0 25.687967 6 TACATGG 13250 0.0 24.518497 2 ACCTGGG 7000 0.0 23.476994 3 CGTATAC 230 3.6361598E-9 22.715866 3 ACATGGG 13965 0.0 22.515495 3 GTATAGG 1040 0.0 22.435574 1 GGTATCA 5930 0.0 22.323614 1 ACGCAGA 14270 0.0 21.561031 7 CGCAGAG 15035 0.0 20.432398 8 CATGGGG 10730 0.0 19.787142 4 GAGTACA 10425 0.0 19.138699 1 AGTACAT 9445 0.0 18.404871 2 >>END_MODULE