##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921466_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4350392 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.786382928251065 31.0 31.0 34.0 28.0 34.0 2 30.896210962138586 31.0 31.0 34.0 27.0 34.0 3 31.033531690937277 33.0 31.0 34.0 28.0 34.0 4 34.551371922346306 37.0 35.0 37.0 32.0 37.0 5 34.549319463625345 37.0 35.0 37.0 32.0 37.0 6 34.64523840610225 37.0 35.0 37.0 32.0 37.0 7 34.54755617424821 37.0 35.0 37.0 32.0 37.0 8 34.53578413163687 37.0 35.0 37.0 32.0 37.0 9 36.04155073841622 39.0 37.0 39.0 32.0 39.0 10-11 35.93166535337505 39.0 37.0 39.0 31.0 39.0 12-13 35.79013121116442 39.0 37.0 39.0 30.5 39.0 14-15 36.87448993102231 40.0 37.0 41.0 31.0 41.0 16-17 36.73774995448686 40.0 37.0 41.0 30.5 41.0 18-19 36.56751506530905 40.0 37.0 41.0 30.0 41.0 20-21 36.45945365383166 40.0 37.0 41.0 30.0 41.0 22-23 36.51020816055197 40.0 37.0 41.0 30.0 41.0 24-25 36.3908301826594 40.0 37.0 41.0 30.0 41.0 26-27 36.14700916607055 39.5 36.0 41.0 29.0 41.0 28-29 35.92894192063612 39.0 36.0 41.0 28.0 41.0 30-31 35.69681651676447 39.0 35.5 40.0 27.0 41.0 32-33 35.44681904527224 39.0 35.0 40.0 26.5 41.0 34-35 35.045747026934585 38.5 35.0 40.0 25.0 41.0 36-37 34.679383145243 38.0 34.0 40.0 24.0 41.0 38-39 34.46651267288097 38.0 34.0 40.0 23.5 41.0 40-41 34.21412599140491 38.0 33.5 40.0 22.5 41.0 42-43 33.94278009889683 38.0 33.0 40.0 21.5 41.0 44-45 33.64593615931622 38.0 33.0 40.0 19.0 41.0 46-47 33.371344122552635 38.0 33.0 40.0 18.0 41.0 48-49 33.17995723144029 38.0 32.5 40.0 16.0 41.0 50-51 32.39969271734593 36.5 31.0 39.0 15.0 40.0 52-53 32.86891238766529 37.0 32.5 39.0 18.0 40.0 54-55 33.30758182251162 38.0 33.0 40.0 17.5 41.0 56-57 33.16279532970822 37.0 33.0 40.0 15.0 41.0 58-59 32.835442989965046 37.0 32.5 40.0 12.5 41.0 60-61 32.39012346473605 36.0 32.0 39.0 8.0 41.0 62-63 31.913012091783912 36.0 31.0 39.0 7.0 40.0 64-65 31.378516234858836 35.0 31.0 38.5 2.0 40.0 66-67 30.901950559857596 35.0 30.0 38.0 2.0 40.0 68-69 30.38997313345556 35.0 30.0 37.0 2.0 39.5 70-71 29.878548875595577 34.0 29.0 37.0 2.0 39.0 72-73 29.33583617292419 34.0 29.0 36.0 2.0 39.0 74-75 28.75148400420008 34.0 28.0 35.5 2.0 38.0 76-77 28.17759721422805 33.5 27.0 35.0 2.0 37.0 78-79 27.627819056305732 33.0 26.0 35.0 2.0 36.5 80-81 27.064700261493677 33.0 25.5 35.0 2.0 36.0 82-83 26.454262167639143 32.0 24.5 35.0 2.0 35.5 84-85 25.85530349908698 32.0 23.5 34.0 2.0 35.0 86-87 25.254624180993346 31.5 20.5 34.0 2.0 35.0 88-89 24.62607507553342 31.0 18.5 34.0 2.0 35.0 90-91 23.897918624344655 31.0 11.0 34.0 2.0 35.0 92-93 23.082917010696967 30.0 2.0 34.0 2.0 35.0 94-95 22.18369700937295 29.5 2.0 34.0 2.0 35.0 96-97 21.284093019663516 29.0 2.0 34.0 2.0 35.0 98 20.656311431245737 29.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 101463.0 3 18653.0 4 14828.0 5 12829.0 6 11802.0 7 12510.0 8 14396.0 9 16593.0 10 18544.0 11 20597.0 12 23443.0 13 28454.0 14 23373.0 15 22360.0 16 24896.0 17 28543.0 18 32152.0 19 31760.0 20 33153.0 21 36067.0 22 40195.0 23 44678.0 24 50062.0 25 57088.0 26 64901.0 27 74922.0 28 87236.0 29 103069.0 30 123870.0 31 151520.0 32 191697.0 33 249000.0 34 343782.0 35 488766.0 36 683102.0 37 736988.0 38 320562.0 39 12538.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.9685750294988 16.8839150295958 13.26696593890255 24.880544002002846 2 16.302959972255724 18.63939889850801 38.49224199707287 26.565399132163403 3 20.396757001171355 22.16349724272422 27.115139982028317 30.32460577407611 4 14.209131621119875 14.722648466349101 34.01980103292138 37.04841887960965 5 16.19754739092583 35.08164821402079 32.218216194396234 16.502588200657144 6 35.58009438360724 32.41354897222062 16.6769214208282 15.329435223343946 7 31.685044230102775 29.598007041034062 19.1936592519413 19.52328947692186 8 28.14765477785615 32.89911723673671 18.92310514897722 20.030122836429918 9 27.041574145191223 16.60209416741707 18.802540109625735 37.55379157776597 10-11 26.858195659728068 24.650137979178346 25.821435045527323 22.670231315566262 12-13 27.085587203092647 21.737277829553882 26.357321940649104 24.819813026704363 14-15 24.204922016422966 23.332184611479892 23.968230905507014 28.494662466590125 16-17 24.729580933641074 26.31085758084352 24.47500463529563 24.48455685021978 18-19 24.661333030358996 25.64188663163296 25.823843727798717 23.87293661020933 20-21 25.23962028843006 24.890050619160466 25.719723574246917 24.150605518162553 22-23 24.99348551852339 24.52836592184716 25.635062716768292 24.843085842861157 24-25 24.73667788068895 24.757540999651628 25.723581615566786 24.782199504092635 26-27 24.717769626027934 24.970500711456815 25.694530237202116 24.61719942531314 28-29 24.722641093370452 25.06566234216795 25.612080697646782 24.599615866814812 30-31 24.9481474053463 24.996055568869767 25.45740451371719 24.598392512066738 32-33 24.79545029677326 24.972907209866857 25.402390879806884 24.829251613552994 34-35 24.92894919581913 24.9787395685419 25.529526094886258 24.56278514075271 36-37 24.941105066710584 24.92535349103259 25.464700395084677 24.66884104717215 38-39 24.926096188812767 25.01721744377311 25.423211587877166 24.63347477953696 40-41 25.069016518654685 24.926625881691518 25.407025236628062 24.597332363025732 42-43 24.979592704588335 24.84645994669605 25.353036966093846 24.820910382621765 44-45 24.903129245695798 24.928339847227452 25.3688783558436 24.79965255123315 46-47 25.01237288621196 24.916728511843313 25.308848496723208 24.76205010522152 48-49 24.995468922352057 24.987694759810143 25.212186698650473 24.804649619187327 50-51 24.84798631180728 25.230534790341785 25.171925572185057 24.749553325665882 52-53 24.980037614614616 25.097800079225173 25.13257960731045 24.789582698849756 54-55 24.944992995745892 24.98053731685572 25.278265797774658 24.796203889623726 56-57 24.899487120590383 25.090281634794596 25.257054965989635 24.75317627862539 58-59 24.977950856892946 25.01906305090369 25.233992379862347 24.768993712341018 60-61 25.08629265806804 24.937142714545146 25.269801387960953 24.706763239425864 62-63 24.884027849030304 25.123967839768248 25.227126090625816 24.764878220575635 64-65 24.94568726426874 24.986632000200622 25.185681430539503 24.881999304991133 66-67 24.91087866887485 25.047535807765414 25.190897492465187 24.850688030894545 68-69 24.883902037722592 25.02776506800882 25.217233060188843 24.871099834079743 70-71 24.866401436630618 24.85111125225917 25.315221470929593 24.96726584018062 72-73 24.937398095461106 24.96042169441911 25.17757556884397 24.924604641275817 74-75 24.82333144699089 25.130468170799652 25.130791411854585 24.91540897035487 76-77 25.001550042829674 24.90994453213588 25.061796772701143 25.0267086523333 78-79 24.876451082825948 24.904390658068206 25.255032327358535 24.964125931747315 80-81 24.86475197486361 25.03158673467974 25.18033070018185 24.923330590274794 82-83 25.05792351544036 24.932521197437403 25.079320430289304 24.930234856832932 84-85 24.950828728835344 25.000002885807334 25.01721384074753 25.031954544609793 86-87 24.92709643771643 24.95227301428843 25.235691312314913 24.884939235680232 88-89 24.894751014269982 24.752252085812042 25.178178507822256 25.174818392095716 90-91 24.944213185118024 24.83608564449313 25.164716711269563 25.054984459119282 92-93 25.00139106720136 24.9576388290839 25.17383722366537 24.867132880049372 94-95 25.018758451982926 24.807603918475806 25.152108272203122 25.021529357338146 96-97 25.027055233776384 24.74016700704579 25.179619737448206 25.053158021729622 98 24.971301202994464 24.896933684768534 24.982591397472103 25.149173714764895 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 593.0 1 470.5 2 561.5 3 746.0 4 592.0 5 548.0 6 901.5 7 1822.0 8 2604.0 9 2486.0 10 2019.5 11 1789.0 12 1937.5 13 2257.5 14 2608.0 15 2956.0 16 3204.0 17 3349.0 18 3392.0 19 3206.5 20 2933.5 21 2710.5 22 2503.0 23 2425.5 24 2521.5 25 2737.0 26 3109.5 27 3819.5 28 4848.5 29 6440.5 30 9073.5 31 12880.5 32 18322.0 33 25060.0 34 33280.0 35 43694.5 36 55147.0 37 67389.0 38 80183.0 39 92624.5 40 105041.0 41 117978.5 42 131531.5 43 145226.5 44 158171.5 45 170636.0 46 184553.0 47 197660.0 48 204564.5 49 205258.0 50 204543.0 51 204134.0 52 204115.5 53 204744.0 54 201831.5 55 193622.0 56 181664.0 57 168216.0 58 153746.0 59 137251.5 60 120440.0 61 102234.5 62 82939.0 63 64146.5 64 47654.5 65 36081.5 66 27716.0 67 21379.0 68 16663.5 69 12924.0 70 9846.5 71 7586.0 72 5925.5 73 4414.0 74 3512.0 75 2690.0 76 1821.0 77 1141.5 78 697.5 79 429.5 80 260.5 81 171.5 82 90.5 83 53.0 84 41.5 85 29.5 86 22.0 87 19.0 88 12.5 89 9.0 90 8.5 91 6.5 92 6.0 93 5.0 94 5.0 95 5.5 96 4.0 97 2.0 98 2.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.47248615756924894 2 0.048455403559035604 3 0.05610988618956637 4 0.05369631058534495 5 0.06383332812307489 6 0.06470681262745978 7 0.043283455835704004 8 0.019952224994897013 9 0.011516203597285026 10-11 0.014745797620076537 12-13 0.010711678395877888 14-15 0.014481453625328475 16-17 0.014148150327602662 18-19 0.05491459160461862 20-21 0.08318790582549802 22-23 0.09896809299024087 24-25 0.06913170123519903 26-27 0.08452111901640127 28-29 0.08556700177823055 30-31 0.05723622147153636 32-33 0.033307343338255496 34-35 0.39594133126394127 36-37 0.6209785233146806 38-39 0.5709140693528307 40-41 0.5658340673668028 42-43 0.5403650981336854 44-45 0.5251825582614165 46-47 0.5144364002140497 48-49 0.5045867131053937 50-51 0.5189072616904408 52-53 0.5978541703828069 54-55 0.5702129831058902 56-57 0.5278030117745711 58-59 0.5055291569127564 60-61 0.5179418314487522 62-63 0.5300671755556741 64-65 0.5477322503351422 66-67 0.573936785466689 68-69 0.52896382670803 70-71 0.4785086033626395 72-73 0.460935474320475 74-75 0.44269573868285894 76-77 0.45665999753585423 78-79 0.4509363753887006 80-81 0.44731601198236853 82-83 0.4672797301944285 84-85 0.4332598073920695 86-87 0.43639745567755733 88-89 0.4639581904343333 90-91 0.4458333869683468 92-93 0.44099474254274096 94-95 0.4523155614482557 96-97 0.44678732399287235 98 0.44133953905762974 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4350392.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.92549160485992 #Duplication Level Percentage of deduplicated Percentage of total 1 74.27012153275406 41.53593058271964 2 14.115885351802726 15.78875655474817 3 4.946456440661475 8.298990244380558 4 2.1896570576421146 4.898305895787454 5 1.227156394070879 3.431466230723056 6 0.7284724419546833 2.444410766214507 7 0.4879471978792335 1.9102080843026998 8 0.34092271955496245 1.5253016552301653 9 0.2478827784241976 1.2476669619376632 >10 1.3446512907408796 13.44078915627431 >50 0.07539848799133222 2.8727285344922904 >100 0.024911776849483258 2.207708585872726 >500 3.714437280209742E-4 0.14031121221819384 >1k 1.6508594606437247E-4 0.2574255350985176 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4705 0.10815117350344519 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 2.2986434325918217E-5 0.0 0.0 0.0 4 0.0 2.2986434325918217E-5 0.0 0.0 0.0 5 0.0 2.2986434325918217E-5 0.0 0.0 0.0 6 0.0 2.2986434325918217E-5 0.0 0.0 2.2986434325918217E-5 7 0.0 2.2986434325918217E-5 0.0 0.0 2.2986434325918217E-5 8 0.0 2.2986434325918217E-5 0.0 0.0 2.2986434325918217E-5 9 0.0 2.2986434325918217E-5 0.0 0.0 2.2986434325918217E-5 10-11 0.0 2.2986434325918217E-5 0.0 0.0 2.2986434325918217E-5 12-13 0.0 2.2986434325918217E-5 0.0 4.5972868651836435E-5 4.5972868651836435E-5 14-15 0.0 2.2986434325918217E-5 0.0 6.895930297775465E-5 1.2642538879255018E-4 16-17 0.0 2.2986434325918217E-5 0.0 1.0343895446663197E-4 1.379186059555093E-4 18-19 0.0 2.2986434325918217E-5 0.0 1.1493217162959108E-4 2.0687790893326395E-4 20-21 0.0 4.5972868651836435E-5 0.0 1.2642538879255018E-4 2.5285077758510036E-4 22-23 0.0 4.5972868651836435E-5 0.0 1.609050402814275E-4 2.643439947480595E-4 24-25 0.0 4.5972868651836435E-5 0.0 2.2986434325918215E-4 2.758372119110186E-4 26-27 0.0 4.5972868651836435E-5 0.0 3.5628973205173236E-4 3.103168633998959E-4 28-29 0.0 4.5972868651836435E-5 0.0 6.4362016112571E-4 3.333032977258141E-4 30-31 0.0 4.5972868651836435E-5 0.0 0.0023101366497547808 3.5628973205173236E-4 32-33 0.0 4.5972868651836435E-5 0.0 0.005976472924738736 3.792761663776506E-4 34-35 0.0 4.5972868651836435E-5 0.0 0.010654212310063093 3.9076938354060966E-4 36-37 0.0 6.895930297775465E-5 0.0 0.01817077633463835 3.9076938354060966E-4 38-39 0.0 1.0343895446663197E-4 0.0 0.031479921809345 3.9076938354060966E-4 40-41 0.0 1.1493217162959108E-4 0.0 0.04537522135936256 3.9076938354060966E-4 42-43 0.0 1.1493217162959108E-4 0.0 0.059155588737750536 4.022626007035688E-4 44-45 0.0 1.1493217162959108E-4 0.0 0.07471740477639716 4.367422521924461E-4 46-47 0.0 1.1493217162959108E-4 0.0 0.09057804446128073 4.827151208442825E-4 48-49 0.0 1.1493217162959108E-4 0.0 0.10609388763127553 5.057015551702007E-4 50-51 0.0 1.1493217162959108E-4 0.0 0.12187407479601839 5.516744238220372E-4 52-53 0.0 1.1493217162959108E-4 0.0 0.13918285984343481 6.091405096368327E-4 54-55 0.0 1.2642538879255018E-4 0.0 0.15735363617807313 7.125794641034647E-4 56-57 0.0 1.8389147460734574E-4 0.0 0.17598414119922987 7.47059115592342E-4 58-59 0.0 2.2986434325918215E-4 0.0 0.1959823390627787 7.930319842441784E-4 60-61 0.0 2.4135756042214124E-4 0.0 0.2152104913764093 8.045252014071375E-4 62-63 0.0 2.5285077758510036E-4 0.0 0.23473746733627682 8.50498070058974E-4 64-65 0.0 2.5285077758510036E-4 0.0 0.2543104161647962 8.964709387108104E-4 66-67 0.0 2.758372119110186E-4 0.0 0.27486028845216703 9.65430241688565E-4 68-69 0.0 2.758372119110186E-4 0.0 0.2960078080320118 0.0010114031103404014 70-71 0.0 2.873304290739777E-4 0.0 0.3186609390602042 0.0010803624133181563 72-73 0.0 3.103168633998959E-4 0.0 0.34065895671010793 0.001172308150621829 74-75 0.0 3.21810080562855E-4 0.0 0.3635879249502114 0.0012182810192736654 76-77 0.0 3.21810080562855E-4 0.0 0.3871720065686035 0.0012412674535995836 78-79 0.0 3.21810080562855E-4 0.0 0.411468667651099 0.0012412674535995836 80-81 0.0 3.21810080562855E-4 0.0 0.4368571843640757 0.00128724032225142 82-83 0.0 3.21810080562855E-4 0.0 0.4622457010770523 0.0013447064080662156 84-85 0.0 3.4479651488877324E-4 0.0 0.48824335829966586 0.0013561996252291748 86 0.0 3.4479651488877324E-4 0.0 0.5096782083085846 0.001379186059555093 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8265 0.0 36.031963 1 GTACCTG 5335 0.0 31.318338 1 TACCTGG 5240 0.0 30.709686 2 TCAACGC 10205 0.0 28.572199 4 TATCAAC 10605 0.0 27.667433 2 CAACGCA 10530 0.0 27.646803 5 ATCAACG 10655 0.0 27.236408 3 AACGCAG 11275 0.0 26.016752 6 GGTATCA 5100 0.0 24.277761 1 GTACATG 13155 0.0 24.14264 1 TACATGG 13825 0.0 22.417187 2 ACGCAGA 13085 0.0 22.204464 7 ACCTGGG 6950 0.0 22.098335 3 ACATGGG 13785 0.0 21.484503 3 CGCAGAG 13680 0.0 21.134554 8 CATGGGG 10475 0.0 19.126125 4 GTATACG 305 6.7539077E-9 18.109562 1 GCAGAGT 15860 0.0 17.940447 9 GTGTAGC 2135 0.0 17.893972 1 GAGTACA 10415 0.0 17.854538 1 >>END_MODULE