##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921465_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3337930 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00494198500268 33.0 31.0 34.0 30.0 34.0 2 32.13125350142154 34.0 31.0 34.0 30.0 34.0 3 32.251842908629 34.0 31.0 34.0 30.0 34.0 4 35.77715260655556 37.0 35.0 37.0 35.0 37.0 5 35.59532075268205 37.0 35.0 37.0 33.0 37.0 6 35.63048655903509 37.0 35.0 37.0 35.0 37.0 7 35.56796427726166 37.0 35.0 37.0 33.0 37.0 8 35.519512092823994 37.0 35.0 37.0 33.0 37.0 9 37.15526688696288 39.0 37.0 39.0 34.0 39.0 10-11 37.06810538267729 39.0 37.0 39.0 34.0 39.0 12-13 36.955650358156106 39.0 37.0 39.0 33.0 39.0 14-15 38.27684373249289 40.0 38.0 41.0 34.0 41.0 16-17 38.191212517937764 40.0 38.0 41.0 33.0 41.0 18-19 38.089206933638515 40.0 38.0 41.0 33.0 41.0 20-21 37.978328335225726 40.0 38.0 41.0 33.0 41.0 22-23 37.94955151845605 40.0 38.0 41.0 33.0 41.0 24-25 38.01120559748107 40.0 38.0 41.0 33.0 41.0 26-27 37.915113558402965 40.0 38.0 41.0 33.0 41.0 28-29 37.7877112461915 40.0 38.0 41.0 33.0 41.0 30-31 37.65299242344807 40.0 38.0 41.0 32.5 41.0 32-33 37.498482442711506 40.0 37.5 41.0 32.0 41.0 34-35 37.366462298490376 40.0 37.0 41.0 32.0 41.0 36-37 37.27580806068431 40.0 37.0 41.0 31.5 41.0 38-39 37.24120083404985 40.0 37.0 41.0 32.0 41.0 40-41 37.08239208131986 40.0 37.0 41.0 31.0 41.0 42-43 36.858402363141224 40.0 36.5 41.0 31.0 41.0 44-45 36.662421470791784 39.5 36.0 41.0 30.0 41.0 46-47 36.40009511883113 39.0 36.0 41.0 30.0 41.0 48-49 36.086868957707324 39.0 35.0 40.0 29.5 41.0 50-51 35.819936757211806 39.0 35.0 40.0 28.5 41.0 52-53 35.5183228827447 38.5 35.0 40.0 28.0 41.0 54-55 35.20682563744596 38.0 34.5 40.0 27.5 41.0 56-57 34.84055507455219 38.0 34.0 40.0 26.5 41.0 58-59 34.46642140488267 37.5 34.0 40.0 26.0 41.0 60-61 34.053381586791815 37.0 33.0 39.5 26.0 41.0 62-63 33.6240419960874 36.0 33.0 39.0 24.5 40.5 64-65 33.11818402423059 36.0 32.0 39.0 23.0 40.0 66-67 32.60507110694353 35.0 32.0 38.5 22.0 40.0 68-69 32.109152978043284 35.0 31.0 38.0 21.0 40.0 70-71 31.56203515352329 35.0 31.0 37.0 19.5 39.0 72-73 31.021246700799598 34.0 30.0 36.5 18.0 39.0 74-75 30.499421497754597 34.0 30.0 36.0 16.0 38.5 76-77 29.200219597175497 32.5 28.5 34.5 13.0 36.0 78-79 30.126814972153397 34.0 30.0 35.0 14.5 37.0 80-81 30.16125952311762 34.0 30.0 35.0 14.0 37.0 82-83 29.82844202844278 34.0 30.0 35.0 9.0 36.0 84-85 29.345266827045503 34.0 29.0 35.0 6.5 36.0 86-87 28.839833669369938 34.0 29.0 35.0 2.0 35.0 88-89 28.304002330785845 33.0 28.5 35.0 2.0 35.0 90-91 27.845570458337953 33.0 27.0 35.0 2.0 35.0 92-93 27.425865731156733 33.0 26.5 34.5 2.0 35.0 94-95 26.952278058557248 33.0 25.5 34.0 2.0 35.0 96-97 26.20275005767047 32.0 24.5 34.0 2.0 35.0 98-99 25.209816862546546 32.0 21.0 34.0 2.0 35.0 100-101 21.579920489644778 28.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 19169.0 3 10063.0 4 5977.0 5 4584.0 6 3993.0 7 4068.0 8 4950.0 9 5735.0 10 6838.0 11 8263.0 12 9746.0 13 11569.0 14 12623.0 15 14362.0 16 16778.0 17 20002.0 18 20401.0 19 17719.0 20 17472.0 21 18563.0 22 20046.0 23 22233.0 24 25392.0 25 29765.0 26 35706.0 27 43222.0 28 53200.0 29 64434.0 30 79335.0 31 99948.0 32 128790.0 33 172503.0 34 245958.0 35 374307.0 36 593525.0 37 759375.0 38 345971.0 39 11345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.78242211554558 17.725717730706616 14.003709205724475 24.488150948023335 2 15.99221673312502 18.902912883134157 39.2025297115278 25.902340672213022 3 20.578713108005594 22.637456272492926 27.36853584906565 29.41529477043583 4 14.229213585536405 15.192496138326595 34.74157139007353 35.83671888606347 5 15.959094224987755 35.06901763526034 32.51245163522738 16.45943650452453 6 34.730512354933296 33.079330761830846 16.894333671184032 15.295823212051825 7 31.276600720265655 29.70993897049741 19.3931767840846 19.620283525152335 8 27.731885301064914 33.62833211970859 18.981101043557334 19.65868153566917 9 26.663753955250197 17.10479283964774 19.222246078334944 37.009207126767116 10-11 26.702711326298832 25.113958411645925 25.890949285826636 22.292380976228607 12-13 26.823611155676698 22.00977850522137 26.627459282967592 24.539151056134344 14-15 23.829450262447168 23.585724696834475 24.380965542960904 28.203859497757456 16-17 24.34560245991917 26.64468883131362 24.852840909942323 24.156867798824884 18-19 24.26887233882179 25.97416629066122 26.255634649484755 23.501326721032235 20-21 24.749994793197022 25.16432145767708 26.297906145990364 23.78777760313553 22-23 24.51679478758632 24.862546686322016 26.21510317783939 24.405555348252275 24-25 24.29817418748301 25.08272243651853 26.2880080413311 24.33109533466736 26-27 24.32669683962982 25.264442928870995 26.22295490476459 24.1859053267346 28-29 24.27091934560478 25.42645979821081 26.145827667854377 24.156793188330035 30-31 24.467864075793802 25.2726047385956 26.036330920649263 24.223200264961335 32-33 24.31115313540371 25.23653644728548 26.03795908144164 24.41435133586917 34-35 24.42315873995554 25.323250420953602 26.14410994529101 24.109480893799848 36-37 24.51327126056302 25.29302598163704 25.98710505910256 24.206597698697383 38-39 24.436774483419985 25.3590175485066 25.996503572459634 24.20770439561378 40-41 24.57053433845006 25.238657790116587 25.99457788318702 24.196229988246337 42-43 24.494770758068935 25.158797675066918 25.95674447651631 24.389687090347838 44-45 24.473791013364014 25.276233968407162 25.89383428913265 24.356140729096175 46-47 24.50885425071309 25.28920958943169 25.915717368187867 24.28621879166736 48-49 24.516697392611363 25.36251346865931 25.730056385241777 24.390732753487544 50-51 24.436356380420907 25.580646330725052 25.64335412707482 24.33964316177922 52-53 24.545931852890444 25.542635571823503 25.57290952790754 24.338523047378516 54-55 24.509125270407097 25.350519947096757 25.741721734266505 24.398633048229645 56-57 24.491709371877626 25.53170421879049 25.683345791620543 24.29324061771134 58-59 24.61198518344534 25.42365112310539 25.647490269296036 24.316873424153236 60-61 24.65332398367815 25.359955982119008 25.728064949444 24.25865508475884 62-63 24.47252876819581 25.48713305933839 25.7104649579262 24.3298732145396 64-65 24.517230236988507 25.375457632643624 25.742687277906136 24.364624852461738 66-67 24.560939487670698 25.41564584982038 25.636200731616416 24.387213930892504 68-69 24.501033770433718 25.46650071181322 25.636442558666513 24.39602295908655 70-71 24.48216272092945 25.333123593148986 25.71615411409117 24.468559571830394 72-73 24.601258268003953 25.307726633439316 25.614606649646415 24.476408448910323 74-75 24.43568387866057 25.5525211305686 25.456302781459655 24.55549220931118 76-77 24.505998872211123 25.344643476125988 25.615562224391525 24.533795427271365 78-79 24.532681980298708 25.294640908360456 25.71418377797552 24.458493333365315 80-81 24.46687184380564 25.532626176972702 25.56888855656699 24.431613422654667 82-83 24.58524114465383 25.467726560179855 25.506309824662665 24.440722470503655 84-85 24.5421781605622 25.47777094412528 25.524606018292044 24.455444877020476 86-87 24.501273203017053 25.47643318387439 25.59782201973086 24.424471593377696 88-89 24.46241623726381 25.35313443377934 25.596943389605624 24.587505939351225 90-91 24.521987315993634 25.375467557926036 25.576642900716852 24.52590222536348 92-93 24.540116079447895 25.496234619143443 25.63595738268376 24.327691918724902 94-95 24.565267706467786 25.4138868353029 25.510346702739874 24.51049875548944 96-97 24.507969293077462 25.398000269043596 25.60366282785194 24.490367610026997 98-99 24.48823087564107 25.440280394020952 25.537775921481042 24.533712808856933 100-101 24.917487942273915 24.979596691608037 25.630854715860714 24.472060650257333 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 118.0 1 94.5 2 144.0 3 233.0 4 198.5 5 157.0 6 273.5 7 614.5 8 969.0 9 1000.5 10 760.0 11 583.0 12 567.5 13 634.5 14 725.0 15 776.5 16 854.0 17 961.0 18 1079.0 19 1196.5 20 1294.5 21 1431.0 22 1564.0 23 1784.5 24 2121.0 25 2462.0 26 2943.0 27 3806.5 28 4936.0 29 6461.0 30 8808.5 31 11707.0 32 15823.0 33 21203.5 34 27521.5 35 34886.0 36 43966.5 37 53891.5 38 62699.0 39 71167.5 40 79707.0 41 88265.5 42 97860.5 43 107625.0 44 117516.0 45 127617.0 46 136364.5 47 145182.0 48 154821.0 49 158975.5 50 155411.5 51 152519.0 52 152017.5 53 150479.0 54 147803.5 55 141489.0 56 131035.0 57 119174.5 58 107900.0 59 96718.0 60 83685.5 61 70341.0 62 57023.5 63 43199.0 64 31208.5 65 22949.0 66 17404.0 67 13310.0 68 10140.0 69 7574.0 70 5640.0 71 4111.0 72 2987.5 73 2331.0 74 1759.5 75 1232.0 76 919.5 77 577.0 78 318.0 79 173.5 80 98.0 81 48.0 82 27.0 83 16.5 84 7.5 85 4.5 86 1.0 87 0.5 88 1.0 89 1.0 90 1.0 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.31555484986204024 2 0.0 3 0.006411159011722834 4 0.05814981141006552 5 4.493803045600118E-4 6 0.06402171405631635 7 0.07471696530484462 8 0.10683267773740011 9 0.09353102072242378 10-11 0.0979798857375679 12-13 0.09793494770711189 14-15 0.06623865689214573 16-17 0.0369989784087743 18-19 0.03956044614476637 20-21 0.028445773278648744 22-23 0.04294577777245179 24-25 0.035021705068710246 26-27 0.02175000674070457 28-29 0.024970565590051317 30-31 0.0025315090490213997 32-33 0.005332646280778806 34-35 0.008088845482080212 36-37 0.010245870943968267 38-39 0.01568337262914441 40-41 0.02014721698777386 42-43 0.003400310971170755 44-45 0.01487448808093639 46-47 0.025779450138259344 48-49 0.0026513437969040692 50-51 0.00680062194234151 52-53 0.0023217982402267273 54-55 0.004149278145437442 56-57 0.003744835871333431 58-59 0.0012582648527680329 60-61 0.005856923302765486 62-63 0.015593496568232407 64-65 0.007085229468562853 66-67 0.04030941331903305 68-69 0.062403944959900294 70-71 0.014005686158787034 72-73 0.03358368809411821 74-75 0.05296695856414005 76-77 0.3049644540179093 78-79 0.07531613904425796 80-81 0.034107965116104894 82-83 0.02968905878793144 84-85 0.020596597292333874 86-87 0.12029910753071514 88-89 0.5366349803620807 90-91 0.13539828576393154 92-93 0.05034557345420665 94-95 0.00816374219950688 96-97 0.005422522341690808 98-99 0.010215912256997601 100-101 0.007070250125077518 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3337930.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.24137056558597 #Duplication Level Percentage of deduplicated Percentage of total 1 73.81740838281128 41.515922190488816 2 15.036825073178084 16.91383302141006 3 4.879184179671971 8.232360165200278 4 2.071478257815509 4.660111052654258 5 1.1080822821887768 3.11600331248696 6 0.6837729791340357 2.3073797701327186 7 0.45175660470030676 1.7785187427280622 8 0.3153427892393009 1.4188248531834398 9 0.24276214120483192 1.2287947988516452 >10 1.2863353709260756 13.077053899483197 >50 0.0816016662306371 3.123417122589436 >100 0.024864667968187176 2.2430976558731954 >500 3.72657684028421E-4 0.13326789261674812 >1k 2.1294724701736257E-4 0.25141552230119385 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3378 0.10120044458691464 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.995868697066745E-5 2 0.0 0.0 0.0 5.99173739413349E-5 2.995868697066745E-5 3 0.0 0.0 0.0 5.99173739413349E-5 2.995868697066745E-5 4 0.0 0.0 0.0 8.987606091200235E-5 2.995868697066745E-5 5 0.0 0.0 0.0 8.987606091200235E-5 2.995868697066745E-5 6 2.995868697066745E-5 0.0 0.0 8.987606091200235E-5 5.99173739413349E-5 7 2.995868697066745E-5 0.0 0.0 1.198347478826698E-4 5.99173739413349E-5 8 2.995868697066745E-5 2.995868697066745E-5 0.0 1.198347478826698E-4 8.987606091200235E-5 9 2.995868697066745E-5 2.995868697066745E-5 0.0 1.198347478826698E-4 8.987606091200235E-5 10-11 5.99173739413349E-5 2.995868697066745E-5 0.0 1.797521218240047E-4 1.198347478826698E-4 12-13 5.99173739413349E-5 2.995868697066745E-5 0.0 1.797521218240047E-4 2.546488392506733E-4 14-15 8.987606091200235E-5 2.995868697066745E-5 0.0 1.797521218240047E-4 2.9958686970667453E-4 16-17 8.987606091200235E-5 2.995868697066745E-5 0.0 1.9473146530933844E-4 3.595042436480094E-4 18-19 8.987606091200235E-5 2.995868697066745E-5 0.0 2.2469015228000587E-4 3.894629306186768E-4 20-21 8.987606091200235E-5 2.995868697066745E-5 0.0 2.396694957653396E-4 4.194216175893443E-4 22-23 8.987606091200235E-5 2.995868697066745E-5 0.0 2.396694957653396E-4 4.34400961074678E-4 24-25 8.987606091200235E-5 2.995868697066745E-5 0.0 2.546488392506733E-4 4.643596480453455E-4 26-27 8.987606091200235E-5 2.995868697066745E-5 0.0 2.846075262213408E-4 5.392563654720141E-4 28-29 1.198347478826698E-4 5.99173739413349E-5 0.0 4.4938030456001174E-4 5.692150524426816E-4 30-31 1.198347478826698E-4 5.99173739413349E-5 0.0 0.0011384301048853632 5.692150524426816E-4 32-33 1.198347478826698E-4 5.99173739413349E-5 0.0 0.003310434910258753 5.99173739413349E-4 34-35 1.4979343485333724E-4 1.4979343485333724E-4 0.0 0.006096592798530826 5.99173739413349E-4 36-37 1.4979343485333724E-4 1.797521218240047E-4 0.0 0.010440602409277607 5.99173739413349E-4 38-39 1.4979343485333724E-4 2.0971080879467213E-4 0.0 0.018589365265299154 6.291324263840164E-4 40-41 1.797521218240047E-4 2.846075262213408E-4 0.0 0.0280263516610594 6.590911133546839E-4 42-43 1.797521218240047E-4 3.2954555667734196E-4 0.0 0.0372236685610543 6.590911133546839E-4 44-45 1.797521218240047E-4 3.2954555667734196E-4 0.0 0.04763431228336125 6.590911133546839E-4 46-47 1.797521218240047E-4 3.2954555667734196E-4 0.0 0.05741582357928417 6.890498003253513E-4 48-49 1.797521218240047E-4 3.2954555667734196E-4 0.0 0.06845559972797513 7.190084872960188E-4 50-51 1.797521218240047E-4 3.595042436480094E-4 0.0 0.07894114016770873 7.190084872960188E-4 52-53 1.797521218240047E-4 3.894629306186768E-4 0.0 0.08957647404229568 7.939052047226874E-4 54-55 1.797521218240047E-4 4.1942161758934426E-4 0.0 0.10106563049554665 8.088845482080211E-4 56-57 1.797521218240047E-4 4.4938030456001174E-4 0.0 0.11379807245808031 8.238638916933549E-4 58-59 1.797521218240047E-4 5.092976785013466E-4 0.0 0.1264556177031873 8.538225786640223E-4 60-61 1.797521218240047E-4 5.092976785013466E-4 0.0 0.13996698552695833 8.68801922149356E-4 62-63 1.797521218240047E-4 5.242770219866803E-4 0.0 0.1533135805723907 9.28719296090691E-4 64-65 1.797521218240047E-4 5.99173739413349E-4 0.0 0.16658527890039634 9.28719296090691E-4 66-67 1.797521218240047E-4 5.99173739413349E-4 0.0 0.18053104768524206 9.28719296090691E-4 68-69 1.797521218240047E-4 6.291324263840164E-4 0.0 0.19537557707920777 9.436986395760247E-4 70-71 1.797521218240047E-4 6.441117698693502E-4 0.0 0.21069944546470418 9.88636670032026E-4 72-73 1.797521218240047E-4 6.590911133546839E-4 0.0 0.2263528594068779 0.0011833681353413642 74-75 1.797521218240047E-4 7.04029143810685E-4 0.0 0.24223096350133166 0.0012432855092826991 76-77 1.797521218240047E-4 7.190084872960188E-4 0.0 0.2591426422962735 0.0012582648527680329 78-79 1.797521218240047E-4 7.489671742666863E-4 0.0 0.2772077305395859 0.0012582648527680329 80-81 1.797521218240047E-4 7.489671742666863E-4 0.0 0.29416434736498365 0.0013331615701947016 82-83 1.797521218240047E-4 7.489671742666863E-4 0.0 0.3110161087859841 0.00152789303550404 84-85 2.6962818273600705E-4 7.489671742666863E-4 0.0 0.3301447304167553 0.00152789303550404 86-87 2.6962818273600705E-4 7.489671742666863E-4 0.0 0.34958791826071844 0.0015578517224747075 88-89 2.6962818273600705E-4 7.489671742666863E-4 0.0 0.3689711887307403 0.001632748439901376 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 4465 0.0 35.200966 1 GTATCAA 7170 0.0 33.2798 1 TACCTGG 4690 0.0 32.60856 2 TCAACGC 8260 0.0 27.830458 4 CAACGCA 8555 0.0 26.915 5 ACCTGGG 5460 0.0 26.879482 3 TATCAAC 8905 0.0 26.02762 2 ATCAACG 8895 0.0 25.736895 3 AACGCAG 9205 0.0 25.325027 6 GGTATCA 4830 0.0 24.553553 1 GTACATG 9650 0.0 23.888023 1 TACATGG 10050 0.0 22.684212 2 ACATGGG 9975 0.0 22.045662 3 ACGCAGA 10665 0.0 21.591988 7 CGCAGAG 11280 0.0 20.330885 8 AGTACAT 7200 0.0 20.11944 2 GAGTACA 7675 0.0 19.733807 1 GTGTAGC 2030 0.0 19.708126 1 CATGGGG 7685 0.0 19.653427 4 GTATAAG 895 0.0 18.625465 1 >>END_MODULE