##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921464_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2416485 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01708680169751 33.0 31.0 34.0 30.0 34.0 2 32.14461335369349 34.0 31.0 34.0 30.0 34.0 3 32.267844410372916 34.0 31.0 34.0 30.0 34.0 4 35.79244522519279 37.0 35.0 37.0 35.0 37.0 5 35.604424608470566 37.0 35.0 37.0 35.0 37.0 6 35.64042524575985 37.0 35.0 37.0 35.0 37.0 7 35.58441620783907 37.0 35.0 37.0 35.0 37.0 8 35.54231869844009 37.0 35.0 37.0 33.0 37.0 9 37.180285000734536 39.0 37.0 39.0 34.0 39.0 10-11 37.09484540562015 39.0 37.0 39.0 34.0 39.0 12-13 36.98907379934078 39.0 37.0 39.0 33.0 39.0 14-15 38.317471037477986 40.0 38.0 41.0 34.0 41.0 16-17 38.23405649114313 40.0 38.0 41.0 33.5 41.0 18-19 38.136695034316375 40.0 38.0 41.0 33.5 41.0 20-21 38.03126855742949 40.0 38.0 41.0 33.0 41.0 22-23 38.004524133193456 40.0 38.0 41.0 33.5 41.0 24-25 38.070854153863976 40.0 38.0 41.0 33.5 41.0 26-27 37.977422371750706 40.0 38.0 41.0 33.0 41.0 28-29 37.85759439847547 40.0 38.0 41.0 33.0 41.0 30-31 37.73192550336543 40.0 38.0 41.0 33.0 41.0 32-33 37.58633862821412 40.0 38.0 41.0 32.5 41.0 34-35 37.45898298561754 40.0 37.5 41.0 32.0 41.0 36-37 37.37907373726715 40.0 37.0 41.0 32.0 41.0 38-39 37.362296062255716 40.0 37.0 41.0 32.0 41.0 40-41 37.21915116377714 40.0 37.0 41.0 31.5 41.0 42-43 37.009089234983875 40.0 37.0 41.0 31.0 41.0 44-45 36.8263835695235 40.0 36.5 41.0 31.0 41.0 46-47 36.58396203576683 39.0 36.0 41.0 30.0 41.0 48-49 36.282011889169596 39.0 36.0 40.0 30.0 41.0 50-51 36.03327891544951 39.0 35.0 40.0 29.5 41.0 52-53 35.75304895333511 39.0 35.0 40.0 28.5 41.0 54-55 35.45389998282629 38.0 35.0 40.0 28.0 41.0 56-57 35.10844304847744 38.0 34.0 40.0 27.5 41.0 58-59 34.75202080708136 38.0 34.0 40.0 26.5 41.0 60-61 34.354021233320296 37.0 34.0 40.0 26.0 41.0 62-63 33.940578981454465 36.5 33.0 39.0 26.0 40.5 64-65 33.4572248534545 36.0 33.0 39.0 25.0 40.0 66-67 32.94735969807385 35.5 32.0 38.5 23.0 40.0 68-69 32.46034157050427 35.0 31.5 38.0 22.0 40.0 70-71 31.916063414422187 35.0 31.0 37.0 21.5 39.0 72-73 31.371656972834508 34.5 30.5 36.5 20.0 39.0 74-75 30.851607603606062 34.0 30.0 36.0 18.0 38.5 76-77 29.50914861875824 32.5 28.5 34.5 18.0 36.5 78-79 30.43997500501762 34.0 30.0 35.0 18.0 37.0 80-81 30.47580762967699 34.0 30.0 35.0 18.0 37.0 82-83 30.14251712714956 34.0 30.0 35.0 16.5 36.0 84-85 29.667002898838604 34.0 30.0 35.0 9.0 36.0 86-87 29.16957998911642 34.0 29.0 35.0 6.0 35.5 88-89 28.644684531457884 33.5 29.0 35.0 2.0 35.0 90-91 28.196239372476967 33.0 28.0 35.0 2.0 35.0 92-93 27.791852008185444 33.0 27.0 35.0 2.0 35.0 94-95 27.33396938114658 33.0 26.5 34.0 2.0 35.0 96-97 26.603166789779372 32.0 25.0 34.0 2.0 35.0 98-99 25.62472516899546 32.0 24.0 34.0 2.0 35.0 100-101 21.936700414031122 28.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 14134.0 3 7252.0 4 4127.0 5 3058.0 6 2794.0 7 2809.0 8 3269.0 9 3818.0 10 4565.0 11 5498.0 12 6526.0 13 7764.0 14 8614.0 15 9609.0 16 11235.0 17 13152.0 18 13440.0 19 11728.0 20 11514.0 21 12262.0 22 13210.0 23 14844.0 24 17156.0 25 20011.0 26 24300.0 27 29298.0 28 35846.0 29 44080.0 30 54934.0 31 68684.0 32 89422.0 33 119941.0 34 174206.0 35 268360.0 36 436529.0 37 577196.0 38 263640.0 39 7660.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.43115295371919 18.496630352607973 15.42631343180102 23.64590326187182 2 15.507234681779527 19.60885335518325 38.70729592776285 26.176616035274375 3 19.884172360863435 23.468008967247695 27.897667100240902 28.75015157164797 4 14.31784651147961 16.09087457210517 35.459360394795745 34.13191852161948 5 15.899854126361745 35.489462957406964 32.55945126682461 16.051231649406677 6 33.64818106077044 33.70694067390941 17.383901108275044 15.260977157045108 7 30.669297240796094 30.340806781182785 19.763513373603647 19.226382604417477 8 27.820078062667204 33.0419584764938 19.304478371206127 19.833485089632877 9 26.628960306842238 17.406338147763094 19.492351725366262 36.47234982002841 10-11 26.289357258412437 25.41630602793275 26.12753842550048 22.166798288154336 12-13 26.65656512100315 22.33098827248657 26.742205958862574 24.270240647647704 14-15 23.691375411452384 23.917428354799185 24.596498187725395 27.794698046023036 16-17 24.005362578442302 27.057321302236392 25.06610079610735 23.871215323213953 18-19 23.98279154662879 26.44369393891347 26.46898831201251 23.104526202445232 20-21 24.625672206721458 25.509012325161056 26.35315267358368 23.512162794533804 22-23 24.283529293168073 25.18427317534419 26.34647393390239 24.185723597585348 24-25 24.115672701411363 25.510643388729786 26.327432712472444 24.046251197386407 26-27 24.120747363447602 25.547783483061682 26.377651530751518 23.953817622739198 28-29 24.0870212728969 25.797495631096496 26.200030795492268 23.915452300514335 30-31 24.293052796068217 25.6393262569985 26.100071552397335 23.967549394535947 32-33 24.132590287626723 25.568261530458404 26.14520346918362 24.153944712731253 34-35 24.29522913032925 25.624844933337116 26.142309759199968 23.937616177133673 36-37 24.26073424757317 25.713440236071705 26.101423093557486 23.924402422797638 38-39 24.249313042121415 25.678773156761324 26.10876595089498 23.96314785022228 40-41 24.34169121672032 25.55893927211807 26.08760618092225 24.011763330239354 42-43 24.326482995479022 25.48800354576837 26.056058978609308 24.129454480143302 44-45 24.28884945496686 25.532570062755124 26.01904899866005 24.159531483617965 46-47 24.38615764217644 25.609247775870497 25.98000156464142 24.02459301731164 48-49 24.357133590200558 25.6786527692683 25.882900907063682 24.08131273346746 50-51 24.3166870558321 25.765338639482582 25.839335583590888 24.078638721094425 52-53 24.37469182307691 25.844505641280097 25.706947257077957 24.07385527856504 54-55 24.356003734487228 25.637602445956702 25.817808835968936 24.188584983587127 56-57 24.403821287815127 25.72483028028557 25.764496553876093 24.106851878023207 58-59 24.464698101171404 25.61437406358507 25.76124158299929 24.15968625224424 60-61 24.485609736313688 25.64332407972997 25.8869140143257 23.984152169630633 62-63 24.270876855776272 25.709867211668534 25.883077480864614 24.13617845169058 64-65 24.28531018674959 25.639730489934966 25.90548689831046 24.169472425004983 66-67 24.350921801782707 25.673151480351606 25.82427704601164 24.15164967185405 68-69 24.351628212045412 25.644500169978524 25.78284322514473 24.221028392831336 70-71 24.395181149733176 25.522788470054774 25.83627944629907 24.245750933912984 72-73 24.429269156949147 25.485693256582522 25.820213756156868 24.264823830311467 74-75 24.26567308659723 25.780347203734287 25.68205465380445 24.271925055864035 76-77 24.38194938535325 25.55080351976276 25.75192214612877 24.315324948755222 78-79 24.30546956564593 25.572071600110824 25.859437799236257 24.263021035006993 80-81 24.327370874333003 25.7609897047196 25.685586193478414 24.226053227468984 82-83 24.441588250695162 25.62072023685711 25.69860325916543 24.239088253282297 84-85 24.35493824733269 25.6252977534438 25.7350241658868 24.28473983333671 86-87 24.398941929811805 25.627315098215785 25.76130362467137 24.212439347301036 88-89 24.301693409084102 25.566778661980504 25.709976236358372 24.421551692577022 90-91 24.321907495612262 25.634075255510343 25.69370417632425 24.35031307255315 92-93 24.409161123271826 25.748560138812927 25.74810471582226 24.094174022092986 94-95 24.372002378852546 25.64101343753712 25.70036059398475 24.286623589625584 96-97 24.352120929701293 25.610156823567486 25.80288584499074 24.234836401740477 98-99 24.353290578057074 25.657925232345242 25.668768561959283 24.320015627638405 100-101 24.753339436388888 25.111017946625303 25.848061231415613 24.287581385570192 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 11.0 1 11.5 2 29.0 3 45.5 4 38.0 5 37.0 6 68.5 7 148.0 8 244.0 9 274.5 10 252.0 11 250.5 12 264.5 13 295.5 14 349.0 15 409.0 16 466.5 17 549.0 18 646.5 19 715.5 20 782.5 21 849.5 22 964.0 23 1192.5 24 1402.5 25 1621.5 26 2043.0 27 2646.0 28 3483.0 29 4590.5 30 6009.5 31 7784.0 32 10371.5 33 13902.5 34 18222.0 35 24141.0 36 31717.0 37 39700.5 38 48173.5 39 56400.0 40 65054.5 41 73019.5 42 80123.0 43 87757.5 44 95070.5 45 101488.0 46 106335.5 47 112464.5 48 119090.0 49 120679.5 50 116289.5 51 111899.5 52 109375.5 53 106144.5 54 101960.0 55 96406.0 56 88238.5 57 78447.5 58 69904.0 59 61898.0 60 52856.0 61 43970.0 62 35354.5 63 26580.0 64 19162.0 65 14084.5 66 10582.5 67 8105.0 68 6144.0 69 4605.0 70 3566.5 71 2630.5 72 1865.5 73 1361.0 74 1017.5 75 720.5 76 492.5 77 289.5 78 158.0 79 96.5 80 57.0 81 26.0 82 9.0 83 3.5 84 3.5 85 1.5 86 0.5 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.32178970695038456 2 0.0 3 0.005628009277938824 4 0.060583864580164994 5 4.1382421161314885E-4 6 0.06459795943281253 7 0.07461250535385074 8 0.10457337827464272 9 0.09166206287231247 10-11 0.09789011725709036 12-13 0.09654518856934763 14-15 0.06472210669629648 16-17 0.03542335251408554 18-19 0.03840288683770022 20-21 0.02708479465008059 22-23 0.04061684636983056 24-25 0.03339561387718111 26-27 0.02062913694891547 28-29 0.022636184375239243 30-31 0.0030622991659373018 32-33 0.0051314202240030455 34-35 0.007676439125423912 36-37 0.011173253713555018 38-39 0.016470203622203323 40-41 0.02079466663356073 42-43 0.0034554321669697926 44-45 0.014380391353556923 46-47 0.024663923012143672 48-49 0.0025450189014208655 50-51 0.006993629176262216 52-53 0.002338106795614291 54-55 0.0036830354833570244 56-57 0.003082990376517959 58-59 8.8972205496827E-4 60-61 0.00533833232980962 62-63 0.014339008932395607 64-65 0.0072212324926494475 66-67 0.03906500557628125 68-69 0.060997688791778144 70-71 0.01270440329652367 72-73 0.03263003908569678 74-75 0.051562496766998346 76-77 0.30867147944224776 78-79 0.07432282840572153 80-81 0.033726673246471627 82-83 0.02824350244259741 84-85 0.019698032472785888 86-87 0.11775367941452151 88-89 0.5302329623399277 90-91 0.13352038187698248 92-93 0.04750701949318949 94-95 0.008028189705295088 96-97 0.005752156541422769 98-99 0.010469752553812666 100-101 0.00864892602271481 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2416485.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.66983413920671 #Duplication Level Percentage of deduplicated Percentage of total 1 77.02492463899843 48.27139251710928 2 13.760536140124913 17.24741035136376 3 4.169068892268244 7.8382456798013145 4 1.7832632930158465 4.470272591993547 5 0.9359451906563818 2.9327764930911826 6 0.5488159895431796 2.06365242225694 7 0.35995932414531473 1.5791013798733475 8 0.2663379724667975 1.3353085247573444 9 0.19223413531427702 1.0842553238435604 >10 0.9065867494376729 9.80423367346336 >50 0.0397974229003986 1.7008080932394638 >100 0.01167072693874275 1.1978156464934842 >500 6.61172453725978E-4 0.2755879628493852 >1k 1.9835173611406425E-4 0.19913933986394355 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.1382421161314887E-5 0.0 5 0.0 0.0 0.0 4.1382421161314887E-5 0.0 6 0.0 0.0 0.0 4.1382421161314887E-5 0.0 7 0.0 0.0 0.0 4.1382421161314887E-5 0.0 8 0.0 0.0 0.0 4.1382421161314887E-5 0.0 9 0.0 0.0 0.0 1.2414726348394467E-4 0.0 10-11 0.0 0.0 0.0 1.2414726348394467E-4 0.0 12-13 0.0 0.0 0.0 1.2414726348394467E-4 2.0691210580657443E-5 14-15 0.0 0.0 0.0 2.0691210580657443E-4 6.207363174197233E-5 16-17 8.276484232262977E-5 0.0 0.0 2.4829452696788933E-4 8.276484232262977E-5 18-19 8.276484232262977E-5 0.0 0.0 2.896769481292042E-4 8.276484232262977E-5 20-21 8.276484232262977E-5 0.0 0.0 3.310593692905191E-4 1.2414726348394467E-4 22-23 8.276484232262977E-5 0.0 0.0 3.5175057987117653E-4 1.448384740646021E-4 24-25 8.276484232262977E-5 0.0 0.0 4.345154221938063E-4 1.6552968464525955E-4 26-27 8.276484232262977E-5 0.0 0.0 4.5520663277446373E-4 1.6552968464525955E-4 28-29 8.276484232262977E-5 4.1382421161314887E-5 0.0 5.58662685677751E-4 1.6552968464525955E-4 30-31 1.0345605290328723E-4 4.1382421161314887E-5 0.0 8.069572126456403E-4 1.6552968464525955E-4 32-33 1.2414726348394467E-4 4.1382421161314887E-5 0.0 0.0015518407935493082 1.6552968464525955E-4 34-35 1.2414726348394467E-4 4.1382421161314887E-5 0.0 0.0025450189014208655 1.6552968464525955E-4 36-37 1.448384740646021E-4 8.276484232262977E-5 0.0 0.004138242116131488 1.6552968464525955E-4 38-39 1.6552968464525955E-4 1.2414726348394467E-4 0.0 0.007014320386842873 1.6552968464525955E-4 40-41 1.6552968464525955E-4 1.2414726348394467E-4 0.0 0.011442239451103566 1.6552968464525955E-4 42-43 1.6552968464525955E-4 1.2414726348394467E-4 0.0 0.015663246409557685 1.6552968464525955E-4 44-45 1.8622089522591699E-4 1.2414726348394467E-4 0.0 0.020111856684399035 1.6552968464525955E-4 46-47 2.0691210580657443E-4 1.2414726348394467E-4 0.0 0.02458115816982104 1.6552968464525955E-4 48-49 2.0691210580657443E-4 1.2414726348394467E-4 0.0 0.030354005921824467 1.6552968464525955E-4 50-51 2.0691210580657443E-4 1.6552968464525955E-4 0.0 0.03525782282944028 3.310593692905191E-4 52-53 2.0691210580657443E-4 1.6552968464525955E-4 0.0 0.03995472763124952 3.7244179045183397E-4 54-55 2.276033163872319E-4 1.6552968464525955E-4 0.0 0.045251677539897825 4.5520663277446373E-4 56-57 2.4829452696788933E-4 2.0691210580657443E-4 0.0 0.051148672555385195 4.5520663277446373E-4 58-59 2.4829452696788933E-4 3.310593692905191E-4 0.0 0.05793538962584084 4.5520663277446373E-4 60-61 2.4829452696788933E-4 3.310593692905191E-4 0.0 0.06463934185397385 4.5520663277446373E-4 62-63 2.4829452696788933E-4 3.310593692905191E-4 0.0 0.07194333918894592 5.379714750970935E-4 64-65 2.896769481292042E-4 3.5175057987117653E-4 0.0 0.07997152889424101 5.379714750970935E-4 66-67 2.896769481292042E-4 4.1382421161314885E-4 0.0 0.0888273670227624 5.379714750970935E-4 68-69 2.896769481292042E-4 4.1382421161314885E-4 0.0 0.09755905788779984 5.379714750970935E-4 70-71 2.896769481292042E-4 4.1382421161314885E-4 0.0 0.10724254443954753 5.58662685677751E-4 72-73 2.896769481292042E-4 4.1382421161314885E-4 0.0 0.1167811925172306 6.207363174197233E-4 74-75 3.310593692905191E-4 4.1382421161314885E-4 0.0 0.1256784130669133 6.207363174197233E-4 76-77 4.1382421161314885E-4 4.1382421161314885E-4 0.0 0.13561019414562886 6.207363174197233E-4 78-79 4.1382421161314885E-4 4.1382421161314885E-4 0.0 0.1466386093851193 6.207363174197233E-4 80-81 4.1382421161314885E-4 4.1382421161314885E-4 0.0 0.15872227636422326 6.207363174197233E-4 82-83 4.345154221938063E-4 4.1382421161314885E-4 0.0 0.17163359176655346 6.621187385810382E-4 84-85 4.5520663277446373E-4 4.5520663277446373E-4 0.0 0.18357242027159282 6.621187385810382E-4 86-87 4.5520663277446373E-4 4.5520663277446373E-4 0.0 0.19561470482953547 6.621187385810382E-4 88-89 4.5520663277446373E-4 4.5520663277446373E-4 0.0 0.20887777081173686 7.241923703230106E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 2830 0.0 33.83453 1 GTATCAA 6965 0.0 28.931421 1 TACCTGG 3210 0.0 28.564163 2 TCAACGC 7830 0.0 25.302391 4 CAACGCA 7985 0.0 24.853214 5 ATCAACG 8160 0.0 24.336853 3 TATCAAC 8190 0.0 24.305208 2 AACGCAG 8345 0.0 23.783026 6 GTACATG 7860 0.0 23.75823 1 ACCTGGG 3990 0.0 22.504385 3 TACATGG 8045 0.0 22.20399 2 ACGCAGA 9760 0.0 20.287588 7 ACATGGG 8400 0.0 20.247992 3 TCGCGAA 60 0.0045937286 19.917774 82-83 CGCAGAG 10115 0.0 19.575567 8 GTATAGG 635 0.0 19.505188 1 GGTATCA 4920 0.0 19.268084 1 CGTATAC 175 9.9276745E-5 19.003702 3 AGAGTAC 7705 0.0 17.777937 10-11 GTACACG 565 0.0 17.706038 1 >>END_MODULE