##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921463_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4681743 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.429029103049867 31.0 31.0 34.0 27.0 34.0 2 30.539389496604148 31.0 31.0 34.0 27.0 34.0 3 30.66933362211467 31.0 31.0 34.0 27.0 34.0 4 34.18461308106831 37.0 35.0 37.0 30.0 37.0 5 34.174729155359444 37.0 35.0 37.0 30.0 37.0 6 34.26694182059972 37.0 35.0 37.0 30.0 37.0 7 34.15999959844015 37.0 35.0 37.0 30.0 37.0 8 34.14448294150277 37.0 35.0 37.0 30.0 37.0 9 35.60716916755149 39.0 37.0 39.0 30.0 39.0 10-11 35.476808316902485 39.0 35.0 39.0 30.0 39.0 12-13 35.32401490214222 39.0 35.0 39.0 30.0 39.0 14-15 36.338220829293704 40.0 36.0 41.0 29.5 41.0 16-17 36.189236252395744 40.0 36.0 41.0 29.0 41.0 18-19 36.01076468742518 39.0 36.0 41.0 28.0 41.0 20-21 35.895687033653914 39.0 36.0 41.0 27.0 41.0 22-23 35.94038149894174 39.0 36.0 41.0 27.5 41.0 24-25 35.80685430618468 39.0 36.0 41.0 27.0 41.0 26-27 35.53785513215911 39.0 36.0 40.5 27.0 41.0 28-29 35.30662906955807 39.0 35.0 40.0 25.5 41.0 30-31 35.053657046104405 39.0 35.0 40.0 25.0 41.0 32-33 34.785209162484996 38.0 34.5 40.0 24.0 41.0 34-35 34.36016158939096 38.0 34.0 40.0 22.5 41.0 36-37 33.975174096485006 38.0 33.5 40.0 19.0 41.0 38-39 33.74843578556106 38.0 33.0 40.0 18.0 41.0 40-41 33.485971464046614 38.0 33.0 40.0 16.5 41.0 42-43 33.19899426346127 38.0 32.5 40.0 15.0 41.0 44-45 32.883371321321995 38.0 32.0 40.0 13.0 41.0 46-47 32.59053903642297 37.0 31.0 40.0 9.0 41.0 48-49 32.37764097687549 37.0 31.0 40.0 8.5 41.0 50-51 31.64018731912452 36.0 30.5 39.0 8.0 40.0 52-53 32.169170007836826 37.0 31.5 39.0 8.0 40.0 54-55 32.605896991782764 37.0 32.0 40.0 7.0 40.5 56-57 32.45750685161488 37.0 32.0 40.0 4.0 41.0 58-59 32.123279940825455 36.5 31.5 40.0 2.0 41.0 60-61 31.67265834540683 36.0 31.0 39.0 2.0 40.5 62-63 31.18082336001784 35.5 30.5 39.0 2.0 40.0 64-65 30.637537985318716 35.0 29.5 38.5 2.0 40.0 66-67 30.14642580765326 35.0 29.0 38.0 2.0 40.0 68-69 29.625859001658142 34.0 28.5 37.0 2.0 39.5 70-71 29.094931631232214 34.0 28.0 36.5 2.0 39.0 72-73 28.531206433159618 34.0 26.5 36.0 2.0 39.0 74-75 27.920687231229905 33.5 26.0 35.5 2.0 38.0 76-77 27.31912067791846 33.0 25.5 35.0 2.0 37.0 78-79 26.737695982030623 33.0 24.5 35.0 2.0 36.5 80-81 26.13323969299468 32.0 23.5 35.0 2.0 36.0 82-83 25.486876468870676 32.0 20.5 34.5 2.0 35.5 84-85 24.852207714092806 31.0 18.5 34.0 2.0 35.0 86-87 24.21172648733602 31.0 14.0 34.0 2.0 35.0 88-89 23.543654681600422 30.5 4.5 34.0 2.0 35.0 90-91 22.7794669634792 30.0 2.0 34.0 2.0 35.0 92-93 21.936151343634197 29.0 2.0 34.0 2.0 35.0 94-95 21.001354410098973 29.0 2.0 34.0 2.0 35.0 96-97 20.085230329815197 28.0 2.0 33.0 2.0 34.0 98 19.4516012519269 27.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 139070.0 3 24296.0 4 18612.0 5 16190.0 6 15204.0 7 15624.0 8 18071.0 9 20710.0 10 23389.0 11 25811.0 12 28817.0 13 32785.0 14 27865.0 15 27989.0 16 30530.0 17 35340.0 18 39471.0 19 39417.0 20 40782.0 21 44400.0 22 48852.0 23 54461.0 24 60736.0 25 68759.0 26 77049.0 27 88567.0 28 101940.0 29 119490.0 30 142376.0 31 171551.0 32 212357.0 33 276349.0 34 368623.0 35 511066.0 36 682667.0 37 710367.0 38 309216.0 39 12944.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.97691973697738 17.63447908329701 14.191004973151081 24.197596206574534 2 15.674811154770918 19.306824158255793 39.05067379926447 25.967690887708812 3 19.7147662840326 23.50032165198751 27.576026347679083 29.20888571630081 4 13.973365442010435 15.603120166681306 35.054387491293745 35.369126900014514 5 15.906806827474561 35.41026788634099 32.40090146124097 16.282023824943476 6 34.02973066960372 33.31558587039764 17.4135099729556 15.241173487043033 7 30.767031400751975 30.084332959731093 20.033506671951944 19.11512896756499 8 27.801474077174237 32.82937660323892 19.52973865990537 19.839410659681477 9 27.07889617727746 16.86530172091515 19.386774173839814 36.669027927967576 10-11 26.316015471495323 25.110566758716175 26.248978449135446 22.324439320653052 12-13 26.656555293811042 22.282546292909025 26.83517411944273 24.22572429383721 14-15 23.968289081685874 23.74085780642471 24.452664717571096 27.83818839431832 16-17 24.230532554541874 26.694133652893758 24.98213260867545 24.093201183888915 18-19 24.205814145090113 26.072758133778386 26.37043690827835 23.350990812853155 20-21 24.87933975251301 25.31626383518996 26.089015318530972 23.715381093766048 22-23 24.600968750587988 24.97945242970208 25.998909118588347 24.420669701121586 24-25 24.36059461555948 25.20897055489964 26.068739398640613 24.36169543090027 26-27 24.414518416852925 25.372479100059962 26.023330115902336 24.18967236718477 28-29 24.381613732576987 25.47341808089571 25.92367246468151 24.22129572184579 30-31 24.601365428132503 25.330596122396116 25.827639062597513 24.240399386873868 32-33 24.460478154550735 25.33382819037766 25.776977374285533 24.428716280786077 34-35 24.586408471576053 25.35292157255496 25.851073594436464 24.209596361432524 36-37 24.65272012215129 25.34776888712344 25.734419385316414 24.265091605408852 38-39 24.628908341759566 25.373288404413557 25.715626320263247 24.28217693356363 40-41 24.73661794900301 25.247565325225718 25.727137043738484 24.28867968203279 42-43 24.648284953565344 25.204263728135462 25.706946974869382 24.440504343429808 44-45 24.662932284319126 25.320795869882357 25.632596860967144 24.383674984831373 46-47 24.762068152179758 25.27320466921759 25.593478237297244 24.371248941305403 48-49 24.717006287747257 25.35616147489721 25.474608231502117 24.45222400585342 50-51 24.602860096577672 25.52776358493266 25.453231912138946 24.416144406350718 52-53 24.692696130287363 25.508759733111408 25.381590618604942 24.416953517996284 54-55 24.594962403810115 25.307839315026303 25.580608940222387 24.51658934094119 56-57 24.66033903444428 25.41896127175121 25.520847481958924 24.39985221184558 58-59 24.705872880919255 25.3290157331547 25.540172360488484 24.424939025437556 60-61 24.742618351325238 25.295446851989972 25.526210772468644 24.435724024216146 62-63 24.608292347913704 25.426937718053814 25.51556586937838 24.449204064654097 64-65 24.624986226350938 25.21590530516929 25.613832201835667 24.5452762666441 66-67 24.6440584124807 25.3744883525993 25.490334465905267 24.49111876901473 68-69 24.62364780895282 25.332972985277486 25.47388024203879 24.569498963730904 70-71 24.594280236720124 25.176808176168127 25.564659313449827 24.664252273661923 72-73 24.705277682995657 25.250042383702343 25.44450310205781 24.60017683124419 74-75 24.54213633094575 25.425658731507372 25.39989049033895 24.632314447207932 76-77 24.68288030008133 25.194106526296817 25.444360277849903 24.67865289577195 78-79 24.671743053692165 25.152502432496544 25.522990780384802 24.65276373342649 80-81 24.605559137082057 25.31322085373221 25.407470610115094 24.673749399070637 82-83 24.73885692057999 25.196238917280322 25.36821858275321 24.696685579386475 84-85 24.681213996656226 25.241338119226402 25.379274731673117 24.69817315244425 86-87 24.69576744975871 25.201352962321756 25.463226326618905 24.639653261300637 88-89 24.669333615465355 25.066425137619834 25.437088243013527 24.827153003901277 90-91 24.671712455074054 25.098976276912786 25.415953550052123 24.813357717961033 92-93 24.69862444097532 25.21763449848481 25.452315441396706 24.63142561914317 94-95 24.72399509172018 25.057064600185157 25.433296672512874 24.78564363558179 96-97 24.73002551424912 25.06284152477839 25.43639321940216 24.77073974157033 98 24.79658190662464 25.031453530733916 25.32571354029442 24.846251022347026 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 616.0 1 485.5 2 624.0 3 825.5 4 588.0 5 477.5 6 800.5 7 1580.0 8 2263.5 9 2253.5 10 1901.0 11 1768.0 12 1938.0 13 2288.0 14 2708.5 15 3023.0 16 3208.0 17 3343.0 18 3409.0 19 3245.5 20 3028.0 21 2864.0 22 2721.0 23 2748.5 24 2915.0 25 3299.5 26 3982.0 27 4994.5 28 6560.0 29 8971.0 30 12508.0 31 17580.0 32 24809.0 33 33830.5 34 44921.5 35 58423.0 36 72794.0 37 86835.5 38 100626.5 39 113330.0 40 125868.0 41 139053.5 42 152496.5 43 166184.5 44 178567.5 45 190654.0 46 203963.0 47 216920.0 48 223260.0 49 221203.0 50 218825.0 51 217303.0 52 214310.5 53 211045.5 54 205216.5 55 195108.5 56 180693.5 57 166224.5 58 151615.0 59 135247.5 60 118266.0 61 98995.0 62 79941.0 63 61598.0 64 45391.5 65 34188.5 66 25996.5 67 19707.0 68 14945.0 69 11197.0 70 8423.0 71 6364.0 72 4808.0 73 3624.0 74 2729.5 75 2016.5 76 1406.0 77 881.0 78 553.0 79 335.5 80 209.5 81 133.0 82 80.5 83 49.5 84 34.5 85 22.5 86 18.0 87 18.5 88 14.5 89 10.5 90 11.0 91 15.0 92 12.0 93 6.5 94 6.0 95 6.5 96 6.0 97 3.5 98 3.5 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.48110287130241874 2 0.05087848692249873 3 0.059230077345125524 4 0.05626109762966485 5 0.06657776815173323 6 0.06706903817659363 7 0.04438517876782216 8 0.021017813237505775 9 0.013435167201617004 10-11 0.015966275807962976 12-13 0.011651643415710773 14-15 0.016414826700226818 16-17 0.015581803614593966 18-19 0.05779898640314088 20-21 0.08634604676078973 22-23 0.10233368213505098 24-25 0.07246232866690888 26-27 0.08753150269034417 28-29 0.0889625936323288 30-31 0.05918735821252896 32-33 0.03425006455928913 34-35 0.4017520825043152 36-37 0.629669334690093 38-39 0.5795170730217357 40-41 0.5737286305549023 42-43 0.5474456842248709 44-45 0.5324192293340322 46-47 0.5227647053672104 48-49 0.5116470511089566 50-51 0.5267803038312867 52-53 0.6085447236210958 54-55 0.57847045427312 56-57 0.5356445238450722 58-59 0.5139752438354689 60-61 0.5254987298533901 62-63 0.5384533068132958 64-65 0.5577837143132376 66-67 0.5829559631957585 68-69 0.536851339340925 70-71 0.48569517805654866 72-73 0.46847936762013637 74-75 0.4478460265759996 76-77 0.462925880382584 78-79 0.45725491553039116 80-81 0.4539655423204563 82-83 0.47376586027896017 84-85 0.4388109300318279 86-87 0.4423886573867895 88-89 0.4696114246339451 90-91 0.45189366438952333 92-93 0.447418835250034 94-95 0.4582588151464102 96-97 0.45303640118648114 98 0.4463935760677167 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4681743.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.77497730608858 #Duplication Level Percentage of deduplicated Percentage of total 1 75.6244099840691 42.93574160631862 2 13.48945744919299 15.317272810987593 3 4.60288305526708 7.839857430161046 4 2.049527158232226 4.654474315873873 5 1.1407406011983667 3.2382760872585563 6 0.6634689525877981 2.260106083587996 7 0.4579436667038929 1.8199818899206361 8 0.31978225839117963 1.4524504370439184 9 0.25024559426001564 1.2786919141554938 >10 1.2970704472160193 13.302936784710317 >50 0.07646953668574111 2.931914922446243 >100 0.027246518986822375 2.476456733106137 >500 5.660829941238816E-4 0.21396234367656888 >1k 1.88694214609115E-4 0.27787664075315227 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4912 0.10491818965714264 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.407869889483468E-5 2 0.0 0.0 0.0 0.0 6.407869889483468E-5 3 0.0 0.0 0.0 0.0 6.407869889483468E-5 4 0.0 0.0 0.0 0.0 6.407869889483468E-5 5 0.0 0.0 0.0 0.0 8.54382651931129E-5 6 0.0 0.0 0.0 0.0 1.0679783149139114E-4 7 0.0 0.0 0.0 2.1359566298278226E-5 1.0679783149139114E-4 8 0.0 0.0 0.0 2.1359566298278226E-5 1.0679783149139114E-4 9 0.0 0.0 0.0 2.1359566298278226E-5 1.0679783149139114E-4 10-11 0.0 0.0 0.0 4.271913259655645E-5 1.0679783149139114E-4 12-13 0.0 0.0 0.0 1.0679783149139114E-4 2.0291587983364316E-4 14-15 0.0 2.1359566298278226E-5 0.0 1.0679783149139114E-4 2.7767436187761695E-4 16-17 0.0 4.271913259655645E-5 0.0 2.0291587983364316E-4 2.990339281758952E-4 18-19 0.0 4.271913259655645E-5 0.0 3.417530607724516E-4 2.990339281758952E-4 20-21 0.0 4.271913259655645E-5 0.0 3.951519765181472E-4 3.6311262707072983E-4 22-23 1.0679783149139113E-5 4.271913259655645E-5 0.0 5.980678563517903E-4 4.058317596672863E-4 24-25 4.271913259655645E-5 4.271913259655645E-5 0.0 6.835061215449032E-4 4.058317596672863E-4 26-27 4.271913259655645E-5 4.271913259655645E-5 0.0 7.369050372905988E-4 4.4855089226384276E-4 28-29 4.271913259655645E-5 4.271913259655645E-5 0.0 9.291411339751029E-4 4.4855089226384276E-4 30-31 4.271913259655645E-5 4.271913259655645E-5 0.0 0.0017942035690553708 4.69910458562121E-4 32-33 4.271913259655645E-5 4.271913259655645E-5 0.0 0.003940839982032333 4.69910458562121E-4 34-35 4.271913259655645E-5 4.271913259655645E-5 0.0 0.006439909238930885 4.69910458562121E-4 36-37 4.271913259655645E-5 6.407869889483468E-5 0.0 0.010071035509638185 4.69910458562121E-4 38-39 4.271913259655645E-5 9.611804834225201E-5 0.0 0.016948815857683774 5.126295911586775E-4 40-41 4.271913259655645E-5 1.0679783149139114E-4 0.0 0.02456350124301996 5.126295911586775E-4 42-43 4.271913259655645E-5 1.0679783149139114E-4 0.0 0.03212478771261045 5.126295911586775E-4 44-45 5.339891574569557E-5 1.0679783149139114E-4 0.0 0.040326861171149295 5.233093743078165E-4 46-47 6.407869889483468E-5 1.2815739778966937E-4 0.0 0.048934766389355414 5.339891574569557E-4 48-49 6.407869889483468E-5 1.2815739778966937E-4 0.0 0.05774558748739518 5.339891574569557E-4 50-51 6.407869889483468E-5 1.2815739778966937E-4 0.0 0.06707971795974277 5.339891574569557E-4 52-53 6.407869889483468E-5 1.2815739778966937E-4 0.0 0.0763177303837481 5.66028506904373E-4 54-55 6.407869889483468E-5 1.495169640879476E-4 0.0 0.08650624350802683 6.301072057992077E-4 56-57 6.407869889483468E-5 1.495169640879476E-4 0.0 0.0967695151143495 6.407869889483468E-4 58-59 6.407869889483468E-5 1.495169640879476E-4 0.0 0.10805804590298955 6.407869889483468E-4 60-61 6.407869889483468E-5 1.495169640879476E-4 0.0 0.11991260519853397 6.728263383957642E-4 62-63 6.407869889483468E-5 1.495169640879476E-4 0.0 0.13225843451893876 7.048656878431814E-4 64-65 6.407869889483468E-5 1.495169640879476E-4 0.0 0.14430522991116768 7.048656878431814E-4 66-67 7.47584820439738E-5 1.495169640879476E-4 0.0 0.1567044581473182 7.155454709923206E-4 68-69 8.54382651931129E-5 1.495169640879476E-4 0.0 0.16978719250501362 7.262252541414597E-4 70-71 8.54382651931129E-5 1.601967472370867E-4 0.0 0.18368159038204362 7.796241698871554E-4 72-73 1.0679783149139114E-4 1.708765303862258E-4 0.0 0.19715947671625716 8.543826519311291E-4 74-75 1.2815739778966937E-4 1.708765303862258E-4 0.0 0.2114810659192527 8.757422182294073E-4 76-77 1.495169640879476E-4 1.708765303862258E-4 0.0 0.2260055710020819 8.864220013785464E-4 78-79 1.495169640879476E-4 1.708765303862258E-4 0.0 0.2418650489785535 8.971017845276855E-4 80-81 1.495169640879476E-4 1.9223609668450405E-4 0.0 0.2591128987644132 9.077815676768247E-4 82-83 1.495169640879476E-4 2.0291587983364316E-4 0.0 0.2763287092008254 9.825400497207985E-4 84-85 1.495169640879476E-4 2.1359566298278227E-4 0.0 0.2926153785032626 9.932198328699376E-4 86 1.495169640879476E-4 2.1359566298278227E-4 0.0 0.3059757872228356 0.0010038996160190766 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10715 0.0 33.808895 1 GTACCTG 6425 0.0 33.314114 1 TACCTGG 6705 0.0 31.38705 2 TCAACGC 13135 0.0 27.052551 4 TATCAAC 13335 0.0 26.921879 2 CAACGCA 13465 0.0 26.355495 5 ATCAACG 13655 0.0 26.08951 3 GTACATG 14525 0.0 25.289206 1 AACGCAG 14290 0.0 25.14886 6 ACCTGGG 8375 0.0 24.96414 3 GGTATCA 6880 0.0 23.818258 1 TACATGG 15270 0.0 22.999918 2 ACATGGG 15480 0.0 22.214006 3 ACGCAGA 16285 0.0 21.865578 7 CGCAGAG 17260 0.0 20.572695 8 TATAACG 320 6.384653E-10 18.626446 2 CATGGGG 12005 0.0 18.370438 4 AGAGTAC 14405 0.0 18.066622 10-11 GCAGAGT 19305 0.0 17.871462 9 CCTGGGG 8685 0.0 17.685265 4 >>END_MODULE