##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921463_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4681743 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.946785203715795 33.0 31.0 34.0 30.0 34.0 2 32.0654256331456 34.0 31.0 34.0 30.0 34.0 3 32.190739431873986 34.0 31.0 34.0 30.0 34.0 4 35.73018467694617 37.0 35.0 37.0 35.0 37.0 5 35.53597004363546 37.0 35.0 37.0 33.0 37.0 6 35.568262290347846 37.0 35.0 37.0 33.0 37.0 7 35.50299877631045 37.0 35.0 37.0 33.0 37.0 8 35.4561042756939 37.0 35.0 37.0 33.0 37.0 9 37.07963615260385 39.0 37.0 39.0 34.0 39.0 10-11 36.98920241884272 39.0 37.0 39.0 33.5 39.0 12-13 36.878459582253875 39.0 37.0 39.0 33.0 39.0 14-15 38.182445619078194 40.0 38.0 41.0 33.0 41.0 16-17 38.08975204320271 40.0 38.0 41.0 33.0 41.0 18-19 37.983494822334336 40.0 38.0 41.0 33.0 41.0 20-21 37.871610210129006 40.0 38.0 41.0 33.0 41.0 22-23 37.83556989352043 40.0 38.0 41.0 33.0 41.0 24-25 37.89541587395976 40.0 38.0 41.0 33.0 41.0 26-27 37.793335943472336 40.0 38.0 41.0 33.0 41.0 28-29 37.65765538603892 40.0 38.0 41.0 32.5 41.0 30-31 37.52295170837015 40.0 38.0 41.0 32.0 41.0 32-33 37.366964718054795 40.0 37.0 41.0 32.0 41.0 34-35 37.22734470901115 40.0 37.0 41.0 31.0 41.0 36-37 37.13431899187974 40.0 37.0 41.0 31.0 41.0 38-39 37.1064105825544 40.0 37.0 41.0 31.0 41.0 40-41 36.94801882546735 40.0 37.0 41.0 31.0 41.0 42-43 36.72009367024204 40.0 36.0 41.0 30.0 41.0 44-45 36.52364973899678 39.0 36.0 41.0 30.0 41.0 46-47 36.264487179240724 39.0 35.5 40.5 30.0 41.0 48-49 35.94318825275117 39.0 35.0 40.0 29.0 41.0 50-51 35.677845516082364 39.0 35.0 40.0 28.0 41.0 52-53 35.37328960602921 38.0 35.0 40.0 28.0 41.0 54-55 35.053974769653095 38.0 34.0 40.0 27.0 41.0 56-57 34.68130726099233 38.0 34.0 40.0 26.0 41.0 58-59 34.29845390915307 37.0 33.5 40.0 26.0 41.0 60-61 33.880527295069385 37.0 33.0 39.5 25.0 41.0 62-63 33.44281168359733 36.0 32.5 39.0 23.5 40.0 64-65 32.93019234503047 35.5 32.0 39.0 22.5 40.0 66-67 32.40543650089293 35.0 31.0 38.0 21.5 40.0 68-69 31.9059874709056 35.0 31.0 37.5 20.0 40.0 70-71 31.352105188174576 34.5 30.5 37.0 18.5 39.0 72-73 30.795156953297095 34.0 30.0 36.0 17.0 39.0 74-75 30.267006540085603 34.0 29.0 36.0 13.0 38.5 76-77 28.97547750912427 32.5 28.0 34.5 11.5 36.0 78-79 29.912239843152435 34.0 29.5 35.0 11.0 37.0 80-81 29.940068154104146 34.0 30.0 35.0 9.5 36.5 82-83 29.6011981007928 34.0 29.5 35.0 7.0 36.0 84-85 29.10309557786491 34.0 29.0 35.0 3.5 36.0 86-87 28.575868645502325 33.5 29.0 35.0 2.0 35.0 88-89 28.029704321659686 33.0 27.5 35.0 2.0 35.0 90-91 27.55231651972353 33.0 26.5 35.0 2.0 35.0 92-93 27.114220921567032 33.0 26.0 34.0 2.0 35.0 94-95 26.618683682551563 32.0 25.0 34.0 2.0 35.0 96-97 25.843783180751274 32.0 24.0 34.0 2.0 35.0 98-99 24.813638745228005 32.0 18.5 34.0 2.0 35.0 100-101 21.192541431684738 27.5 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 30005.0 3 15354.0 4 8951.0 5 6868.0 6 6071.0 7 6179.0 8 7088.0 9 8738.0 10 10254.0 11 12196.0 12 14268.0 13 16853.0 14 18792.0 15 20875.0 16 23473.0 17 27563.0 18 27819.0 19 25728.0 20 25956.0 21 27449.0 22 29561.0 23 32778.0 24 37463.0 25 44084.0 26 52481.0 27 63380.0 28 77195.0 29 94681.0 30 115598.0 31 145063.0 32 187499.0 33 250856.0 34 356307.0 35 536280.0 36 832325.0 37 1026939.0 38 446166.0 39 12607.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.17868392294671 18.12303670530759 14.571642846429105 24.12663652531659 2 15.79550607540824 19.61681792443541 38.65158766724273 25.93608833291362 3 19.69221981698864 23.718166434474046 27.8114425035961 28.778171244941213 4 14.225391727190228 15.833485434805747 35.113917947275574 34.82720489072845 5 15.928241787957509 35.411927491636625 32.471855441224406 16.18797527918146 6 34.0417050764623 33.41031322515967 17.39455589370662 15.153425804671414 7 30.797561958897706 30.087307419848138 20.04216595250035 19.0729646687538 8 27.76704389218389 32.95189551439046 19.537168537826684 19.74389205559896 9 26.919092892158275 16.895440494111273 19.4840557438041 36.70141086992635 10-11 26.26455795472816 25.189345347441016 26.339282659934387 22.206814037896436 12-13 26.60700289107436 22.290371452383223 26.926117891350167 24.17650776519225 14-15 23.892032345027303 23.744918170278407 24.597926038524978 27.765123446169316 16-17 24.169740613285068 26.739793957703732 25.108906224142284 23.981559204868912 18-19 24.207460466374503 26.14201752021434 26.407909470879616 23.242612542531546 20-21 24.833205548302477 25.31891329914741 26.207301469654272 23.640579682895847 22-23 24.564102525748485 24.98346329599616 26.150343988017287 24.302090190238072 24-25 24.262250806895235 25.276998152081443 26.21200413108139 24.248746909941936 26-27 24.34725501326395 25.376922802475594 26.152185993091255 24.123636191169204 28-29 24.32492253918708 25.471978173703434 26.093384544798546 24.109714742310935 30-31 24.51650152838309 25.342718053717533 25.977930748402013 24.16284966949737 32-33 24.366060819669066 25.306600234435283 25.955542739047893 24.371796206847755 34-35 24.500969063659994 25.356977076779362 26.017175059272773 24.124878800287867 36-37 24.531313335223878 25.38450405532351 25.909797556925934 24.17438505252668 38-39 24.556388410650566 25.396046488823963 25.889685284171833 24.157879816353635 40-41 24.620196962088436 25.28013414948485 25.877527921015197 24.222140967411516 42-43 24.592727874700287 25.274015689164436 25.842414144812377 24.290842291322896 44-45 24.530872249380003 25.2411462224217 25.826246117082786 24.40173541111551 46-47 24.596607194342667 25.309681138910012 25.769933878928054 24.323777787819267 48-49 24.581079929366346 25.431682744075186 25.635853478955262 24.351383847603213 50-51 24.536019271940603 25.553285943840727 25.560805033945382 24.349889750273288 52-53 24.62756003415052 25.513309795932056 25.51638564968973 24.34274452022769 54-55 24.590998392093223 25.35887400600549 25.61955676028412 24.43057084161718 56-57 24.624730111561007 25.431778781620846 25.559909038945104 24.383582067873043 58-59 24.644385515044263 25.392289314637782 25.556396895562173 24.406928274755778 60-61 24.75286968084396 25.323211906472036 25.594664089138337 24.32925432354567 62-63 24.56588987728479 25.499378717321775 25.57110420832629 24.363627197067146 64-65 24.660036704639797 25.277156557795603 25.615184010764246 24.447622726800358 66-67 24.610976256004378 25.415049829911624 25.546515752406023 24.42745816167798 68-69 24.643054422051495 25.36961434478431 25.544871853099156 24.442459380065035 70-71 24.62587870679311 25.232660901582488 25.625575577382488 24.51588481424191 72-73 24.745974673959168 25.290134569964547 25.461578696144343 24.502312059931945 74-75 24.576405477069088 25.463060664165948 25.395518907364362 24.565014951400602 76-77 24.658148526894017 25.233644659579713 25.537750690901735 24.570456122624535 78-79 24.61094216282919 25.265316016175998 25.612013280923858 24.511728540070955 80-81 24.568532929698424 25.432524731647817 25.496080563453592 24.50286177520017 82-83 24.659736951126 25.38470347658748 25.410993835386247 24.544565736900275 84-85 24.67074883210289 25.35553913403316 25.41160802239081 24.56210401147313 86-87 24.63184626200577 25.381139883076575 25.487295871860056 24.499717983057597 88-89 24.631268404907317 25.19766822144338 25.50916396359409 24.661899410055216 90-91 24.61672679550236 25.298009888106463 25.44251800229108 24.64274531410009 92-93 24.6881067425617 25.4313785682513 25.48664152622357 24.393873162963434 94-95 24.66705957595703 25.2690588419757 25.44509900844164 24.618782573625634 96-97 24.650418587721425 25.302875857425555 25.515160240745615 24.531545314107404 98-99 24.66669821107933 25.275961096126327 25.433376972144394 24.623963720649943 100-101 25.117129298826303 24.78471556907013 25.5624801740518 24.535674958051764 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 251.0 1 228.0 2 423.5 3 633.5 4 449.0 5 313.0 6 563.0 7 1280.0 8 1930.5 9 1868.5 10 1333.5 11 943.5 12 902.5 13 950.5 14 978.0 15 1055.5 16 1177.5 17 1273.5 18 1389.0 19 1491.5 20 1573.5 21 1708.5 22 1848.0 23 2049.0 24 2325.0 25 2667.0 26 3268.5 27 4124.0 28 5347.5 29 7210.0 30 10168.0 31 14520.0 32 20781.0 33 28627.5 34 37910.5 35 49270.0 36 62485.5 37 76734.5 38 90489.0 39 103070.0 40 116206.0 41 128363.0 42 140565.0 43 154571.0 44 167965.5 45 180494.0 46 192064.0 47 204107.0 48 217844.5 49 223906.5 50 218465.5 51 213912.0 52 211050.5 53 206908.0 54 202355.0 55 194011.0 56 180255.5 57 163404.0 58 147858.5 59 133001.0 60 116133.5 61 98225.5 62 80433.0 63 61604.0 64 45201.0 65 34064.0 66 25783.5 67 19692.0 68 15082.0 69 11325.5 70 8518.5 71 6480.5 72 4849.0 73 3620.5 74 2731.0 75 1940.0 76 1291.0 77 809.0 78 528.5 79 293.5 80 152.0 81 88.5 82 52.0 83 24.5 84 13.5 85 4.5 86 3.0 87 3.5 88 1.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.31704004256534374 2 0.0 3 0.006087476395009294 4 0.06085340438379467 5 4.4855089226384276E-4 6 0.06476220501637958 7 0.07606141558816876 8 0.10605024667095139 9 0.09432384477319665 10-11 0.09772001581462289 12-13 0.09801904974279878 14-15 0.0654457111379245 16-17 0.03598018942944967 18-19 0.03918412437419141 20-21 0.028974251683614415 22-23 0.04275117194600387 24-25 0.034442300655973646 26-27 0.02157316196126101 28-29 0.024574181026169102 30-31 0.0034495699571719333 32-33 0.005991358346667043 34-35 0.008971017845276855 36-37 0.011758441247202165 38-39 0.0168740573756398 40-41 0.021242088683637694 42-43 0.003588407138110742 44-45 0.014140032889460186 46-47 0.024830495821748438 48-49 0.002605867088389944 50-51 0.0069525388300895625 52-53 0.0024777096906002743 54-55 0.004068997379822002 56-57 0.003823362367391802 58-59 0.0012388548453001371 60-61 0.005457369189210087 62-63 0.014983735758242175 64-65 0.006803021866001615 66-67 0.03893848936176121 68-69 0.06223109641003362 70-71 0.012260391055211702 72-73 0.03206070901371562 74-75 0.05159403239349106 76-77 0.3052709215349924 78-79 0.073775941994253 80-81 0.03430346347503484 82-83 0.02819462751372726 84-85 0.019095452270660736 86-87 0.1197310488849986 88-89 0.5275172088685773 90-91 0.13300601933937853 92-93 0.04907360357029423 94-95 0.009077815676768245 96-97 0.006130195527605851 98-99 0.01094677772786759 100-101 0.00807391606074917 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4681743.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.021998521601276 #Duplication Level Percentage of deduplicated Percentage of total 1 72.26482594108975 38.31625494212234 2 15.234585658023539 16.155363564738643 3 5.292982601078744 8.419335469477755 4 2.3430600113861577 4.969348978389598 5 1.2695608398602516 3.365732648707657 6 0.7700257633546166 2.4496982931710027 7 0.527081963569257 1.9562857365192292 8 0.3803713888173758 1.6134440972427457 9 0.2691522324831212 1.2843890345525162 >10 1.5185541299773297 14.590054016013173 >50 0.09547060222899947 3.4540303905339713 >100 0.03332028155740626 2.860679952221296 >500 7.665260359286931E-4 0.25964289835386106 >1k 2.420605375118199E-4 0.3057399779560324 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4743 0.10130842295273362 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.271913259655645E-5 2 0.0 0.0 0.0 0.0 4.271913259655645E-5 3 0.0 0.0 0.0 0.0 4.271913259655645E-5 4 0.0 0.0 0.0 0.0 4.271913259655645E-5 5 0.0 2.1359566298278226E-5 0.0 0.0 6.407869889483468E-5 6 0.0 2.1359566298278226E-5 0.0 0.0 8.54382651931129E-5 7 0.0 2.1359566298278226E-5 0.0 0.0 8.54382651931129E-5 8 0.0 2.1359566298278226E-5 0.0 0.0 8.54382651931129E-5 9 0.0 2.1359566298278226E-5 0.0 8.54382651931129E-5 8.54382651931129E-5 10-11 0.0 2.1359566298278226E-5 0.0 1.0679783149139114E-4 1.0679783149139114E-4 12-13 0.0 2.1359566298278226E-5 0.0 1.8155631353536492E-4 1.495169640879476E-4 14-15 0.0 2.1359566298278226E-5 0.0 2.1359566298278227E-4 1.9223609668450402E-4 16-17 1.0679783149139113E-5 2.1359566298278226E-5 0.0 2.7767436187761695E-4 2.349552292810605E-4 18-19 2.1359566298278226E-5 2.1359566298278226E-5 0.0 4.058317596672863E-4 2.5631479557933874E-4 20-21 2.1359566298278226E-5 2.1359566298278226E-5 0.0 4.3787110911470365E-4 2.5631479557933874E-4 22-23 2.1359566298278226E-5 2.1359566298278226E-5 0.0 5.446689406060949E-4 2.5631479557933874E-4 24-25 2.1359566298278226E-5 2.1359566298278226E-5 0.0 6.62146555246625E-4 2.6699457872847785E-4 26-27 2.1359566298278226E-5 2.1359566298278226E-5 0.0 7.262252541414597E-4 2.7767436187761695E-4 28-29 2.1359566298278226E-5 2.1359566298278226E-5 0.0 9.291411339751029E-4 2.7767436187761695E-4 30-31 2.1359566298278226E-5 2.1359566298278226E-5 0.0 0.00168740573756398 2.7767436187761695E-4 32-33 2.1359566298278226E-5 3.203934944741734E-5 0.0 0.0037913230179443856 2.7767436187761695E-4 34-35 2.1359566298278226E-5 6.407869889483468E-5 0.0 0.006279712491693798 2.7767436187761695E-4 36-37 2.1359566298278226E-5 9.611804834225203E-5 0.0 0.009889479196102818 2.8835414502675606E-4 38-39 2.1359566298278226E-5 1.495169640879476E-4 0.0 0.016671141495806157 3.203934944741734E-4 40-41 2.1359566298278226E-5 1.708765303862258E-4 0.0 0.024168349266501812 3.203934944741734E-4 42-43 2.1359566298278226E-5 1.9223609668450405E-4 0.0 0.03175099530239058 3.203934944741734E-4 44-45 2.1359566298278226E-5 1.9223609668450405E-4 0.0 0.039921029411482005 3.524328439215908E-4 46-47 2.1359566298278226E-5 1.9223609668450405E-4 0.0 0.048422136798196735 4.058317596672863E-4 48-49 2.1359566298278226E-5 1.9223609668450405E-4 0.0 0.05720091854678909 4.2719132596556454E-4 50-51 2.1359566298278226E-5 2.1359566298278227E-4 0.0 0.06621465552466249 4.4855089226384276E-4 52-53 2.1359566298278226E-5 2.349552292810605E-4 0.0 0.07540994881607128 5.019498080095384E-4 54-55 2.1359566298278226E-5 2.7767436187761695E-4 0.0 0.08536350671106893 5.446689406060949E-4 56-57 2.1359566298278226E-5 2.7767436187761695E-4 0.0 0.09531706460606659 5.66028506904373E-4 58-59 2.1359566298278226E-5 2.7767436187761695E-4 0.0 0.10626384233393418 5.767082900535121E-4 60-61 4.271913259655645E-5 2.990339281758952E-4 0.0 0.11789412618334667 5.873880732026513E-4 62-63 4.271913259655645E-5 2.990339281758952E-4 0.0 0.1300263598407687 6.62146555246625E-4 64-65 4.271913259655645E-5 3.097137113250343E-4 0.0 0.14157120542498808 7.689443867380162E-4 66-67 4.271913259655645E-5 3.417530607724516E-4 0.0 0.15355392211832217 7.689443867380162E-4 68-69 4.271913259655645E-5 3.417530607724516E-4 0.0 0.16634830233099085 7.689443867380162E-4 70-71 4.271913259655645E-5 3.417530607724516E-4 0.0 0.17984754823150267 7.903039530362944E-4 72-73 4.271913259655645E-5 3.417530607724516E-4 0.0 0.19301572085439117 9.291411339751029E-4 74-75 4.271913259655645E-5 3.417530607724516E-4 0.0 0.20712371439440397 9.825400497207985E-4 76-77 4.271913259655645E-5 3.417530607724516E-4 0.0 0.22124238771756588 9.932198328699376E-4 78-79 4.271913259655645E-5 3.524328439215907E-4 0.0 0.23693098916365124 0.0010145793991682157 80-81 4.271913259655645E-5 3.6311262707072983E-4 0.0 0.2536341700089048 0.001025259182317355 82-83 4.271913259655645E-5 3.6311262707072983E-4 0.0 0.2705509465171412 0.0011106974475104678 84-85 4.271913259655645E-5 3.6311262707072983E-4 0.0 0.28682693603642917 0.001132057013808746 86-87 5.339891574569557E-5 3.6311262707072983E-4 0.0 0.304395179316763 0.001153416580107024 88-89 6.407869889483468E-5 3.6311262707072983E-4 0.0 0.3226255691523435 0.0011747761464053024 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 6720 0.0 34.58554 1 GTATCAA 10230 0.0 33.752533 1 TACCTGG 7065 0.0 32.34012 2 TCAACGC 12650 0.0 26.737822 4 TATCAAC 12900 0.0 26.217964 2 CAACGCA 13060 0.0 25.92121 5 ATCAACG 13245 0.0 25.499458 3 GTACATG 14335 0.0 24.884455 1 ACCTGGG 8950 0.0 24.786041 3 AACGCAG 13860 0.0 24.631104 6 TACATGG 14950 0.0 23.131237 2 GGTATCA 6610 0.0 22.119785 1 ACATGGG 15425 0.0 21.464508 3 ACGCAGA 16240 0.0 20.934555 7 TATAACG 435 0.0 20.747847 2 CGCAGAG 17210 0.0 19.671862 8 GTATAGG 1135 0.0 19.302162 1 CATGGGG 12040 0.0 18.780928 4 TATCACG 490 0.0 18.419006 2 GAGTACA 11855 0.0 18.238884 1 >>END_MODULE