##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921461_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4024193 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.108566114994982 31.0 31.0 34.0 26.0 34.0 2 30.192636635469523 31.0 31.0 34.0 26.0 34.0 3 30.328798593904416 31.0 31.0 34.0 26.0 34.0 4 33.82289691374147 37.0 35.0 37.0 30.0 37.0 5 33.800687491877255 37.0 35.0 37.0 30.0 37.0 6 33.90278696871646 37.0 35.0 37.0 30.0 37.0 7 33.78024885983351 37.0 35.0 37.0 29.0 37.0 8 33.754306267119894 37.0 35.0 37.0 29.0 37.0 9 35.17741271355524 39.0 35.0 39.0 29.0 39.0 10-11 35.042962899642234 39.0 35.0 39.0 28.5 39.0 12-13 34.866180498798144 39.0 35.0 39.0 27.0 39.0 14-15 35.83987870363076 39.5 36.0 41.0 27.0 41.0 16-17 35.6823570589184 39.0 36.0 41.0 27.0 41.0 18-19 35.49745849664765 39.0 36.0 40.5 27.0 41.0 20-21 35.37495343786941 39.0 36.0 40.0 26.5 41.0 22-23 35.40672825582669 39.0 36.0 41.0 26.5 41.0 24-25 35.26473531463327 39.0 35.5 41.0 25.5 41.0 26-27 34.98201465486372 39.0 35.0 40.0 24.5 41.0 28-29 34.73751557144501 39.0 34.5 40.0 24.0 41.0 30-31 34.47115123454566 38.0 34.0 40.0 22.5 41.0 32-33 34.18860477119263 38.0 34.0 40.0 20.0 41.0 34-35 33.75654423135272 38.0 33.0 40.0 17.0 41.0 36-37 33.361964995217676 38.0 33.0 40.0 15.0 41.0 38-39 33.116915987876325 38.0 32.5 40.0 11.0 41.0 40-41 32.836636314411365 38.0 32.0 40.0 9.0 41.0 42-43 32.53708271447219 38.0 31.0 40.0 8.5 41.0 44-45 32.20440197575017 37.0 31.0 40.0 8.0 41.0 46-47 31.901442351298755 37.0 30.5 40.0 6.5 41.0 48-49 31.669524423903127 37.0 30.0 40.0 2.0 41.0 50-51 30.945232000552657 36.0 29.5 39.0 2.0 40.0 52-53 31.479721400042195 36.5 30.5 39.0 2.0 40.0 54-55 31.899448783892822 37.0 31.0 40.0 2.0 40.5 56-57 31.737010376987385 37.0 31.0 40.0 2.0 41.0 58-59 31.39469677522922 36.0 31.0 39.0 2.0 41.0 60-61 30.926096114177426 36.0 30.0 39.0 2.0 40.0 62-63 30.42886946525676 35.0 29.0 39.0 2.0 40.0 64-65 29.8723088082505 35.0 28.5 38.0 2.0 40.0 66-67 29.37034269976614 34.5 28.0 38.0 2.0 40.0 68-69 28.837182635127093 34.0 27.5 37.0 2.0 39.0 70-71 28.30018540363248 34.0 26.0 36.5 2.0 39.0 72-73 27.7318784163682 33.5 26.0 36.0 2.0 39.0 74-75 27.117014641196384 33.0 25.0 35.0 2.0 38.0 76-77 26.51461050700103 33.0 23.5 35.0 2.0 37.0 78-79 25.926041941825353 32.0 21.5 35.0 2.0 36.5 80-81 25.327913944485267 32.0 19.0 35.0 2.0 36.0 82-83 24.67739979170979 31.0 16.5 34.0 2.0 35.5 84-85 24.0336494795354 31.0 8.5 34.0 2.0 35.0 86-87 23.38070949877404 30.5 4.0 34.0 2.0 35.0 88-89 22.703049406427574 30.0 2.0 34.0 2.0 35.0 90-91 21.937285811093055 29.0 2.0 34.0 2.0 35.0 92-93 21.095503247483407 29.0 2.0 34.0 2.0 35.0 94-95 20.16412209851764 28.0 2.0 33.0 2.0 34.5 96-97 19.260169927237584 26.5 2.0 33.0 2.0 34.0 98 18.63552742127428 25.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 147164.0 3 24919.0 4 19118.0 5 15868.0 6 14847.0 7 15837.0 8 17637.0 9 20318.0 10 22865.0 11 24817.0 12 27197.0 13 30505.0 14 26419.0 15 26480.0 16 29603.0 17 33603.0 18 37640.0 19 37141.0 20 38653.0 21 41903.0 22 46049.0 23 50445.0 24 56119.0 25 62894.0 26 70597.0 27 79966.0 28 92428.0 29 106011.0 30 125100.0 31 150698.0 32 184709.0 33 235590.0 34 311439.0 35 425546.0 36 560133.0 37 569260.0 38 234696.0 39 9979.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.844098489287354 16.648221624114083 12.418785433267933 25.088894453330628 2 16.369058865881573 18.379850712130587 38.74978370562484 26.501306716362993 3 20.909755442620014 21.644198351052722 27.099324707356615 30.346721498970652 4 13.779048214809167 14.066413181494172 34.34302247379019 37.81151612990647 5 15.58133648161557 35.51097257254708 32.716532261272945 16.1911586845644 6 35.932099123066365 32.67550670412746 16.32689953593409 15.065494636872092 7 32.17222146951084 29.657140655240095 18.682509238669034 19.488128636580033 8 28.382453895569032 33.752261166396494 18.35333897040438 19.51194596763009 9 26.924559499421047 16.485931593143658 18.5937383889945 37.99577051844079 10-11 27.207203064943652 24.76984962340611 25.6346796932571 22.38826761839314 12-13 27.142997560339445 21.638421006654173 26.405880336221582 24.8127010967848 14-15 23.984474890497722 23.332649442475688 23.958801022928405 28.724074644098184 16-17 24.63530242457358 26.490208268843602 24.471132439857257 24.403356866725563 18-19 24.581423820378483 25.81388017010578 25.85630964741639 23.74838636209935 20-21 25.0250751258979 25.029601456583162 25.96154061374557 23.98378280377337 22-23 24.75536011394183 24.736841581604544 25.82793012556038 24.67986817889325 24-25 24.52504341410485 24.905727329705865 25.987738491609925 24.58149076457936 26-27 24.528851141022404 25.10050325929126 26.003039874634702 24.367605725051632 28-29 24.44630946135181 25.308211729685187 25.888603941165666 24.35687486779734 30-31 24.63182253238767 25.195232300237237 25.783468398766317 24.389476768608777 32-33 24.484264535916694 25.21939863105247 25.759696773809456 24.53664005922138 34-35 24.6717132628004 25.211418567164678 25.843638009652555 24.27323016038237 36-37 24.69295458147967 25.11535767128514 25.781989502301904 24.40969824493329 38-39 24.62099048320176 25.236539297478444 25.805283161825553 24.337187057494248 40-41 24.782367072621607 25.14324367141588 25.736308703667888 24.33808055229462 42-43 24.662494892910054 25.05004042579422 25.718249513772562 24.56921516752317 44-45 24.623421770863697 25.18824852627012 25.692155368508026 24.496174334358155 46-47 24.68123110950605 25.189448146577497 25.681006833669745 24.448313910246707 48-49 24.70633509090264 25.267818301595696 25.522313738358417 24.503532869143246 50-51 24.486894598066293 25.44666863312842 25.58980740080628 24.476629367999006 52-53 24.604533617189016 25.412107534711144 25.529764165569652 24.453594682530188 54-55 24.551575893999487 25.242179003806292 25.669425097556292 24.53682000463792 56-57 24.535038672363342 25.35003703005242 25.6520723715844 24.462851925999843 58-59 24.665374158994926 25.286184897688408 25.621719123440563 24.426721819876107 60-61 24.688204871784052 25.250953399381743 25.692405598538 24.36843613029621 62-63 24.52421543538075 25.39401523979382 25.643557184197675 24.43821214062775 64-65 24.55829457321733 25.26985510208212 25.667358131979352 24.5044921927212 66-67 24.580792263886707 25.329368581935807 25.55621556998757 24.533623584189908 68-69 24.47364828738753 25.323931563193113 25.657070854608317 24.545349294811036 70-71 24.53014796265026 25.146585147461458 25.66675317409226 24.65651371579602 72-73 24.615276702852793 25.209371673426993 25.599939192632426 24.57541243108779 74-75 24.44140877061824 25.445976382391077 25.574869811895955 24.537745035094726 76-77 24.664898863424906 25.176219747419715 25.50792310243104 24.65095828672434 78-79 24.535323454361368 25.190055667962515 25.649818352494375 24.624802525181742 80-81 24.556772371408204 25.333384748087674 25.54520854423366 24.564634336270462 82-83 24.704447553201685 25.22755254265721 25.514729817708332 24.55327008643277 84-85 24.601455848762225 25.295091495270828 25.44533554671191 24.658117109255038 86-87 24.615727858845847 25.239432711088416 25.60405497996206 24.540784450103676 88-89 24.569074404871856 25.07299000406388 25.567382454640857 24.79055313642341 90-91 24.558005003165974 25.09882912538439 25.594902790676432 24.748263080773203 92-93 24.693463231872563 25.194059777337113 25.603486755517686 24.50899023527264 94-95 24.744695829583645 25.076785625366522 25.529818007054384 24.648700537995452 96-97 24.646911832534325 25.043153279249886 25.59999031609465 24.709944572121135 98 24.723641944081248 25.097027614467127 25.382438918961007 24.796891522490615 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 547.0 1 393.0 2 383.0 3 555.0 4 464.0 5 416.5 6 700.0 7 1341.0 8 1989.0 9 2037.0 10 1669.5 11 1454.0 12 1604.0 13 1879.0 14 2126.0 15 2444.5 16 2740.5 17 2893.0 18 2978.5 19 2887.0 20 2755.5 21 2690.0 22 2649.0 23 2824.0 24 3149.5 25 3800.0 26 4837.5 27 6447.0 28 8670.0 29 11546.5 30 15142.5 31 19890.0 32 26015.0 33 32615.0 34 40227.0 35 49072.5 36 58707.0 37 68633.0 38 78515.0 39 88751.0 40 99743.5 41 111347.5 42 122775.0 43 134321.0 44 145789.5 45 156210.0 46 167858.0 47 179598.0 48 184612.5 49 184574.5 50 184491.0 51 183900.5 52 183634.0 53 182956.5 54 179862.0 55 172636.5 56 161610.5 57 149725.5 58 137209.0 59 122366.0 60 106270.5 61 89769.5 62 72949.0 63 56744.0 64 42715.5 65 32619.0 66 25049.0 67 19269.5 68 14849.0 69 11418.5 70 8702.0 71 6660.0 72 5199.5 73 3859.0 74 2923.0 75 2238.0 76 1528.0 77 966.0 78 591.5 79 335.0 80 200.5 81 125.5 82 78.0 83 49.5 84 39.5 85 29.5 86 21.5 87 18.5 88 17.5 89 15.0 90 8.5 91 5.5 92 7.0 93 6.5 94 5.5 95 5.0 96 3.5 97 2.5 98 2.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.462204471803415 2 0.0471398861833913 3 0.055489386319194936 4 0.052929866932326555 5 0.06284489834359336 6 0.06376433734664316 7 0.042194795329150464 8 0.020550704203302378 9 0.013220041881689074 10-11 0.015605613349061537 12-13 0.011865733079899498 14-15 0.01606533285058644 16-17 0.015394390875387937 18-19 0.05529058869691389 20-21 0.08140762632408535 22-23 0.09681444205086585 24-25 0.0682497086993591 26-27 0.08209099315067642 28-29 0.08392987115677603 30-31 0.05599880522629009 32-33 0.03283888223054908 34-35 0.3880653835439801 36-37 0.6077988804214907 38-39 0.5586088937583262 40-41 0.5534277307276266 42-43 0.5263042801376574 44-45 0.5113074845068315 46-47 0.5018397477456971 48-49 0.4919992654427856 50-51 0.5065860409776569 52-53 0.5856702200913326 54-55 0.5566581920896935 56-57 0.5140906512187661 58-59 0.4928317304860875 60-61 0.5059896481108138 62-63 0.5183151006922382 64-65 0.5363062855086722 66-67 0.561528733835579 68-69 0.5159419540762582 70-71 0.4660934502892878 72-73 0.4497671955594575 74-75 0.43224815509594094 76-77 0.444871804110787 78-79 0.4390818233618517 80-81 0.43638563060966507 82-83 0.4548738094818017 84-85 0.4235880336753232 86-87 0.42665697196928676 88-89 0.45139485109188354 90-91 0.4356152898233261 92-93 0.43172631133745326 94-95 0.4409952504763066 96-97 0.43598803536510305 98 0.43099324510529186 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4024193.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.01855220741684 #Duplication Level Percentage of deduplicated Percentage of total 1 75.2009371084571 43.63049495673688 2 13.801602993858255 16.014980476904114 3 4.775749025396554 8.312461324784701 4 2.0855780696021555 4.840088804554251 5 1.1308650139620768 3.2805575426049964 6 0.7196699103579502 2.5052523759725838 7 0.43602030571558503 1.7708086809457464 8 0.328436484108215 1.5244327440042325 9 0.23039311425549597 1.203036743489566 >10 1.2107482627897437 12.312724670305313 >50 0.06008473067636928 2.352535780361031 >100 0.019312860519426118 1.7922936871882542 >500 4.300859591425846E-4 0.16900641987167087 >1k 1.7203434214666514E-4 0.2913257922768368 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4477 0.11125211936902628 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.4849702785129837E-5 2 0.0 0.0 0.0 2.4849702785129837E-5 2.4849702785129837E-5 3 0.0 0.0 0.0 4.9699405570259674E-5 2.4849702785129837E-5 4 0.0 0.0 0.0 4.9699405570259674E-5 2.4849702785129837E-5 5 0.0 0.0 0.0 4.9699405570259674E-5 2.4849702785129837E-5 6 0.0 0.0 0.0 4.9699405570259674E-5 2.4849702785129837E-5 7 0.0 0.0 0.0 9.939881114051935E-5 2.4849702785129837E-5 8 0.0 0.0 0.0 1.242485139256492E-4 2.4849702785129837E-5 9 0.0 0.0 0.0 1.4909821671077903E-4 2.4849702785129837E-5 10-11 0.0 0.0 0.0 1.7394791949590886E-4 2.4849702785129837E-5 12-13 0.0 2.4849702785129837E-5 0.0 1.7394791949590886E-4 1.3667336531821413E-4 14-15 0.0 2.4849702785129837E-5 0.0 2.2364732506616856E-4 1.7394791949590886E-4 16-17 0.0 2.4849702785129837E-5 0.0 2.3607217645873346E-4 1.987976222810387E-4 18-19 0.0 2.4849702785129837E-5 0.0 2.7334673063642825E-4 2.2364732506616856E-4 20-21 0.0 2.4849702785129837E-5 0.0 3.230461362066879E-4 3.230461362066879E-4 22-23 0.0 2.4849702785129837E-5 0.0 3.3547098759925285E-4 3.478958389918177E-4 24-25 0.0 2.4849702785129837E-5 0.0 3.478958389918177E-4 3.727455417769476E-4 26-27 0.0 2.4849702785129837E-5 0.0 4.2244494734720726E-4 3.727455417769476E-4 28-29 0.0 2.4849702785129837E-5 0.0 8.697395974795444E-4 3.727455417769476E-4 30-31 0.0 2.4849702785129837E-5 0.0 0.0028452909688973663 3.727455417769476E-4 32-33 0.0 2.4849702785129837E-5 0.0 0.0070945901451545685 3.727455417769476E-4 34-35 0.0 2.4849702785129837E-5 0.0 0.012263328324461576 3.975952445620774E-4 36-37 0.0 3.727455417769476E-5 0.0 0.020115834404562605 3.975952445620774E-4 38-39 0.0 4.9699405570259674E-5 0.0 0.03150942313154463 4.2244494734720726E-4 40-41 0.0 4.9699405570259674E-5 0.0 0.043188783440555656 4.472946501323371E-4 42-43 0.0 4.9699405570259674E-5 0.0 0.05486814374956668 4.472946501323371E-4 44-45 0.0 6.21242569628246E-5 0.0 0.0673302696963093 4.721443529174669E-4 46-47 0.0 7.454910835538951E-5 0.0 0.08004089267090321 5.342686098802915E-4 48-49 0.0 7.454910835538951E-5 0.0 0.09342245762069562 5.963928668431161E-4 50-51 0.0 7.454910835538951E-5 0.0 0.10723889236922782 6.460922724133758E-4 52-53 0.0 8.697395974795443E-5 0.0 0.11945252128811913 6.833668265910706E-4 54-55 0.0 9.939881114051935E-5 0.0 0.13360442702425057 7.206413807687653E-4 56-57 0.0 9.939881114051935E-5 0.0 0.14886214453432028 7.454910835538952E-4 58-59 0.0 9.939881114051935E-5 0.0 0.16332467155526587 7.70340786339025E-4 60-61 0.0 1.242485139256492E-4 0.0 0.17856996421394303 8.200401919092846E-4 62-63 0.0 1.242485139256492E-4 0.0 0.1948713692409882 8.821644488721094E-4 64-65 0.0 1.242485139256492E-4 0.0 0.21142127129588467 8.945893002646742E-4 66-67 0.0 1.242485139256492E-4 0.0 0.22821967037863244 9.194390030498041E-4 68-69 1.2424851392564919E-5 1.242485139256492E-4 0.0 0.24645935222291773 9.442887058349338E-4 70-71 2.4849702785129837E-5 1.242485139256492E-4 0.0 0.2646244849588476 9.442887058349338E-4 72-73 3.727455417769476E-5 1.242485139256492E-4 0.0 0.28256597036971143 0.001043687516975453 74-75 4.9699405570259674E-5 1.242485139256492E-4 0.0 0.29936436945245914 0.0011182366253308428 76-77 4.9699405570259674E-5 1.242485139256492E-4 0.0 0.3177904240676329 0.0011182366253308428 78-79 4.9699405570259674E-5 1.242485139256492E-4 0.0 0.3367258975899019 0.001217635436471362 80-81 4.9699405570259674E-5 1.3667336531821413E-4 0.0 0.3561583651678734 0.001254909990649057 82-83 4.9699405570259674E-5 1.4909821671077903E-4 0.0 0.37623692501825834 0.0013543088017895762 84-85 4.9699405570259674E-5 1.4909821671077903E-4 0.0 0.3963030600172507 0.001379158504574706 86 4.9699405570259674E-5 1.7394791949590886E-4 0.0 0.41138682960782447 0.0014164330587524009 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 4715 0.0 32.022617 1 TACCTGG 4815 0.0 29.708466 2 GTATCAA 8885 0.0 29.583076 1 GTACATG 12410 0.0 25.55713 1 TCAACGC 10495 0.0 24.682432 4 TACATGG 12840 0.0 24.031006 2 CAACGCA 10895 0.0 23.776236 5 ATCAACG 10925 0.0 23.585049 3 TATCAAC 11030 0.0 23.235832 2 AACGCAG 11395 0.0 22.889349 6 ACATGGG 13075 0.0 22.617256 3 ACCTGGG 6635 0.0 21.628447 3 GAGTACA 9740 0.0 21.267588 1 AGTACAT 9060 0.0 21.20351 2 GGTATCA 6430 0.0 21.047525 1 ACGCAGA 13180 0.0 19.539616 7 CATGGGG 9960 0.0 19.1034 4 GTATAGG 1210 0.0 19.021698 1 GTGTAGC 2340 0.0 18.885134 1 CGCAGAG 13775 0.0 18.524221 8 >>END_MODULE