##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921461_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4024193 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.868173320712998 33.0 31.0 34.0 30.0 34.0 2 31.979536766750503 34.0 31.0 34.0 30.0 34.0 3 32.10713750558187 34.0 31.0 34.0 30.0 34.0 4 35.656385267804005 37.0 35.0 37.0 35.0 37.0 5 35.45156606554407 37.0 35.0 37.0 33.0 37.0 6 35.490278672021944 37.0 35.0 37.0 33.0 37.0 7 35.419382469975965 37.0 35.0 37.0 33.0 37.0 8 35.37137483217132 37.0 35.0 37.0 33.0 37.0 9 36.982720510671335 39.0 37.0 39.0 33.0 39.0 10-11 36.88938477851336 39.0 37.0 39.0 33.0 39.0 12-13 36.76267067707737 39.0 37.0 39.0 33.0 39.0 14-15 38.044874711526006 40.0 38.0 41.0 33.0 41.0 16-17 37.94503581214917 40.0 38.0 41.0 33.0 41.0 18-19 37.83243808137433 40.0 38.0 41.0 33.0 41.0 20-21 37.71313465830292 40.0 38.0 41.0 32.0 41.0 22-23 37.67537864113376 40.0 38.0 41.0 32.5 41.0 24-25 37.729967474224026 40.0 38.0 41.0 32.5 41.0 26-27 37.616688985841385 40.0 38.0 41.0 32.0 41.0 28-29 37.47721319529158 40.0 38.0 41.0 32.0 41.0 30-31 37.33570271107773 40.0 37.0 41.0 32.0 41.0 32-33 37.167616463723284 40.0 37.0 41.0 31.0 41.0 34-35 37.015671465061445 40.0 37.0 41.0 31.0 41.0 36-37 36.911025514929335 40.0 37.0 41.0 31.0 41.0 38-39 36.874777253476665 40.0 37.0 41.0 31.0 41.0 40-41 36.70895928699245 40.0 36.0 41.0 30.0 41.0 42-43 36.46085823915503 39.0 36.0 41.0 30.0 41.0 44-45 36.243527460039815 39.0 35.5 41.0 30.0 41.0 46-47 35.96110338147301 39.0 35.0 40.0 29.0 41.0 48-49 35.61793942288553 39.0 35.0 40.0 28.0 41.0 50-51 35.33109333970811 38.0 35.0 40.0 27.5 41.0 52-53 35.00706228553153 38.0 34.0 40.0 26.5 41.0 54-55 34.66523635919052 38.0 34.0 40.0 26.0 41.0 56-57 34.268927956487175 37.5 33.5 40.0 25.5 41.0 58-59 33.868779280715415 37.0 33.0 40.0 24.0 41.0 60-61 33.42636809417441 36.5 32.5 39.0 23.0 40.5 62-63 32.967567410409984 36.0 32.0 39.0 22.0 40.0 64-65 32.42799115251182 35.0 31.0 38.5 20.5 40.0 66-67 31.882748416887562 35.0 31.0 38.0 18.5 40.0 68-69 31.3583918564542 35.0 30.5 37.5 17.5 39.5 70-71 30.787173726508644 34.0 30.0 37.0 12.5 39.0 72-73 30.220105869673745 34.0 29.0 36.0 8.0 39.0 74-75 29.678492805886794 34.0 29.0 35.5 7.0 38.0 76-77 28.44547962784091 32.0 27.0 34.5 7.0 36.0 78-79 29.371625938417964 34.0 29.0 35.0 7.0 37.0 80-81 29.388865916719205 34.0 29.0 35.0 2.0 36.5 82-83 29.027690769304552 34.0 29.0 35.0 2.0 36.0 84-85 28.504837988635238 33.5 29.0 35.0 2.0 35.5 86-87 27.956939441025817 33.0 27.0 35.0 2.0 35.0 88-89 27.385289174748827 33.0 26.0 35.0 2.0 35.0 90-91 26.87020068371472 32.5 25.0 34.5 2.0 35.0 92-93 26.397292575182156 32.0 25.0 34.0 2.0 35.0 94-95 25.851528989787518 32.0 24.0 34.0 2.0 35.0 96-97 25.02824901787762 32.0 19.5 34.0 2.0 35.0 98-99 23.96359220345545 31.0 6.5 34.0 2.0 35.0 100-101 20.407738271996397 27.0 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 28395.0 3 14630.0 4 8637.0 5 6327.0 6 5638.0 7 5794.0 8 6877.0 9 8198.0 10 9718.0 11 11513.0 12 13591.0 13 15818.0 14 17989.0 15 20453.0 16 22951.0 17 26709.0 18 27390.0 19 25130.0 20 25636.0 21 27258.0 22 29071.0 23 32050.0 24 36410.0 25 42410.0 26 49923.0 27 60209.0 28 73346.0 29 88613.0 30 108001.0 31 133885.0 32 170672.0 33 225858.0 34 314859.0 35 462716.0 36 694246.0 37 820763.0 38 342315.0 39 10194.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.993391924438114 17.134408406489126 12.820887999724809 25.051311669347953 2 16.47050725449798 18.646272681255596 38.388790000877194 26.49443006336923 3 21.00405125526288 21.77839221180843 27.222039703395033 29.99551682953366 4 14.065257935457145 14.365487900421614 34.245609742816676 37.32364442130457 5 15.660165619163397 35.44110440607409 32.740027016737855 16.158702958024655 6 36.072887913274904 32.77526732339921 16.107933430922362 15.043911332403528 7 32.226269376334024 29.6854899536383 18.627068937261875 19.46117173276581 8 28.40369689151264 33.77376166223801 18.265603257292366 19.556938188956988 9 26.812472127340836 16.519417776370553 18.575894592660596 38.09221550362802 10-11 27.176949374971006 24.845525874905654 25.618670689881824 22.35885406024152 12-13 27.148434779494142 21.620752404243166 26.453191629074972 24.77762118718772 14-15 23.878959044099155 23.380591528734428 23.983978637520277 28.756470789646137 16-17 24.597705235366067 26.507809117881713 24.57773141387436 24.316754232877855 18-19 24.511321670988227 25.87216200020807 25.93454607105271 23.681970257750994 20-21 24.9718964237337 24.995211983302777 26.0423366316896 23.990554961273926 22-23 24.654130969139313 24.741887066851874 25.97362966553864 24.630352298470175 24-25 24.477631084888934 24.926882458961767 26.109950436306423 24.48553601984288 26-27 24.47903973725153 25.120016066351248 26.109622772561586 24.29132142383564 28-29 24.389563706167362 25.276960371880396 26.043285132414784 24.29019078953746 30-31 24.558278443655055 25.17351582911423 25.90594838815012 24.3622573390806 32-33 24.359681820616103 25.204534392953796 25.86679304311565 24.568990743314448 34-35 24.560961626064184 25.198684046700535 26.00636802903487 24.233986298200406 36-37 24.527061375435334 25.166986579563872 25.963767891729894 24.342184153270896 38-39 24.47466250117279 25.25456175636707 25.98418181038677 24.286593932073373 40-41 24.657472109432952 25.15839689652314 25.93386843354874 24.250262560495166 42-43 24.556994928742203 25.128943445299278 25.827803872267026 24.486257753691493 44-45 24.48431807260536 25.18729052644895 25.86701282188453 24.46137857906116 46-47 24.556818082960604 25.214472930365737 25.829686806761227 24.399022179912432 48-49 24.569430604186287 25.33458496206596 25.684266504973795 24.41171792877396 50-51 24.414787780074747 25.475076626464826 25.67569028432218 24.434445309138255 52-53 24.55816795668693 25.414248215189644 25.602004623646003 24.425579204477426 54-55 24.525597853996675 25.249447787341 25.698387329047673 24.52656702961465 56-57 24.490817835062227 25.418117215711234 25.681496084418416 24.409568864808126 58-59 24.63328577461791 25.30083072232548 25.658285224812154 24.407598278244453 60-61 24.63792102553092 25.346025232704704 25.677699016695893 24.33835472506849 62-63 24.43790802159505 25.423441526043483 25.705017201603287 24.433633250758184 64-65 24.480108431686944 25.324062430726684 25.70754459089106 24.488284546695308 66-67 24.5660200953071 25.356401036572507 25.60481748426205 24.472761383858348 68-69 24.45516080802967 25.39289166024124 25.650687767092357 24.50125976463673 70-71 24.467851517721506 25.224428932236087 25.68783182198032 24.619887728062082 72-73 24.63149704848391 25.238902218717318 25.594115735225486 24.53548499757329 74-75 24.40421812412043 25.470844481317446 25.54346616770438 24.581471226857744 76-77 24.568517974824626 25.288373300926594 25.5585527027411 24.58455602150768 78-79 24.472115674062227 25.256756923102174 25.74031128765591 24.53081611517969 80-81 24.460644646169463 25.45037632449368 25.60561421755379 24.483364811783066 82-83 24.615647138203474 25.35941558405242 25.597192806978015 24.42774447076609 84-85 24.575521658899472 25.406589413507874 25.478443376231546 24.539445551361105 86-87 24.4834335635238 25.41438326556989 25.633689285787586 24.468493885118725 88-89 24.48717851044939 25.23612650248269 25.630689594922135 24.64600539214578 90-91 24.474556348910433 25.328112642707772 25.63552677233701 24.561804236044786 92-93 24.576498731323507 25.428349238818964 25.652300598015763 24.342851431841765 94-95 24.57647610825233 25.31754351172432 25.56362575418914 24.54235462583421 96-97 24.460137462254046 25.36006367886607 25.60305928938819 24.5767395694917 98-99 24.506937978509395 25.314541118707794 25.553347697184115 24.625173205598696 100-101 24.98391167831359 24.759923968933975 25.67327094498185 24.58289340777058 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 199.0 1 167.0 2 261.5 3 401.5 4 316.5 5 253.5 6 527.0 7 1185.0 8 1751.5 9 1666.0 10 1164.5 11 814.0 12 776.0 13 817.0 14 867.0 15 957.0 16 1030.5 17 1128.5 18 1246.0 19 1319.0 20 1436.0 21 1624.0 22 1820.5 23 2072.5 24 2466.5 25 3128.5 26 4051.0 27 5227.0 28 6929.0 29 9432.5 30 12751.5 31 16722.0 32 21683.0 33 27970.0 34 34855.5 35 42279.5 36 51684.5 37 61737.0 38 70783.0 39 80522.5 40 91494.5 41 102490.5 42 112927.0 43 124106.5 44 135916.0 45 146946.0 46 157189.5 47 167693.5 48 179619.0 49 184912.5 50 183084.5 51 182247.5 52 181535.5 53 180467.0 54 178779.0 55 172082.5 56 160974.0 57 148316.0 58 135269.5 59 120882.5 60 104712.5 61 89171.0 62 73381.0 63 56862.0 64 42254.0 65 31822.5 66 24440.5 67 19149.5 68 14945.0 69 11356.0 70 8781.5 71 6784.0 72 5062.0 73 3870.5 74 2909.0 75 2152.0 76 1530.0 77 896.5 78 528.5 79 320.0 80 190.5 81 107.0 82 51.5 83 23.0 84 12.0 85 9.0 86 6.5 87 3.0 88 1.5 89 1.0 90 0.5 91 1.0 92 1.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.30900605413308957 2 0.0 3 0.006336674210208108 4 0.056557923538955515 5 5.218437584877266E-4 6 0.06376433734664316 7 0.07420121251639769 8 0.10354871150563603 9 0.09134750743813728 10-11 0.09590742789920861 12-13 0.0944537202862785 14-15 0.06367736338689521 16-17 0.03547295072577285 18-19 0.03805731981542635 20-21 0.02804288959301902 22-23 0.0417599255304107 24-25 0.03452866201993791 26-27 0.021805614193951436 28-29 0.023955113484865165 30-31 0.0033919844301702226 32-33 0.005876954708683207 34-35 0.008498598352514404 36-37 0.010971143779634825 38-39 0.01641322868957826 40-41 0.02073707697419085 42-43 0.003528657795488437 44-45 0.014027657222205793 46-47 0.023806015268154384 48-49 0.0025595193868683734 50-51 0.0071939889562950875 52-53 0.0023855714673724645 54-55 0.0038392790803025603 56-57 0.003528657795488437 58-59 0.0011058117739382778 60-61 0.005193587882092136 62-63 0.01454950098069352 64-65 0.006883367671480964 66-67 0.037585175462508884 68-69 0.05988778371216291 70-71 0.011940282188254887 72-73 0.03132305036065616 74-75 0.049165136960379385 76-77 0.29469262532885476 78-79 0.07277235460625274 80-81 0.033174353218148336 82-83 0.027322248212250256 84-85 0.018749100751380463 86-87 0.11668177942757715 88-89 0.5163146996180352 90-91 0.12883328408950565 92-93 0.046990787966680526 94-95 0.008324650433018495 96-97 0.006262125101852719 98-99 0.010797195860138914 100-101 0.007740682417567944 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4024193.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.513754760176845 #Duplication Level Percentage of deduplicated Percentage of total 1 71.12883325853291 38.06370939374641 2 15.82910528199637 16.941497162675475 3 5.57781077762133 8.954687941568976 4 2.5365106714576413 5.42952840075823 5 1.3448081341503524 3.5982866345206483 6 0.8325689668016713 2.673233490621507 7 0.5448741678901385 2.0410783816939815 8 0.37387561980961015 1.6005990583440477 9 0.275166909863153 1.3252693079279212 >10 1.4498987978413127 13.76506172742443 >50 0.0795547991993151 2.8828125535446802 >100 0.02629545578795502 2.237471296105836 >500 5.112499815808792E-4 0.19467104810349095 >1k 1.859090666249134E-4 0.2920936029643721 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4376 0.10874229938772817 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.4849702785129837E-5 2 0.0 0.0 0.0 2.4849702785129837E-5 2.4849702785129837E-5 3 0.0 0.0 0.0 2.4849702785129837E-5 2.4849702785129837E-5 4 0.0 0.0 0.0 2.4849702785129837E-5 2.4849702785129837E-5 5 0.0 2.4849702785129837E-5 0.0 2.4849702785129837E-5 4.9699405570259674E-5 6 0.0 2.4849702785129837E-5 0.0 2.4849702785129837E-5 4.9699405570259674E-5 7 0.0 2.4849702785129837E-5 0.0 2.4849702785129837E-5 7.454910835538951E-5 8 0.0 2.4849702785129837E-5 0.0 4.9699405570259674E-5 7.454910835538951E-5 9 0.0 2.4849702785129837E-5 0.0 1.4909821671077903E-4 9.939881114051935E-5 10-11 0.0 2.4849702785129837E-5 0.0 1.4909821671077903E-4 1.242485139256492E-4 12-13 0.0 2.4849702785129837E-5 0.0 1.4909821671077903E-4 2.1122247367360363E-4 14-15 0.0 2.4849702785129837E-5 0.0 1.6152306810334393E-4 2.9819643342155806E-4 16-17 0.0 2.4849702785129837E-5 0.0 1.7394791949590886E-4 3.975952445620774E-4 18-19 0.0 2.4849702785129837E-5 0.0 2.1122247367360363E-4 4.721443529174669E-4 20-21 0.0 2.4849702785129837E-5 0.0 2.484970278512984E-4 4.969940557025968E-4 22-23 0.0 2.4849702785129837E-5 0.0 2.6092187924386327E-4 6.08817718235681E-4 24-25 0.0 2.4849702785129837E-5 0.0 2.733467306364282E-4 6.460922724133758E-4 26-27 0.0 2.4849702785129837E-5 0.0 3.2304613620668787E-4 6.460922724133758E-4 28-29 0.0 2.4849702785129837E-5 0.0 7.330662321613302E-4 6.460922724133758E-4 30-31 0.0 2.4849702785129837E-5 0.0 0.002658918198008893 6.460922724133758E-4 32-33 0.0 2.4849702785129837E-5 0.0 0.006858517968695835 6.833668265910705E-4 34-35 0.0 2.4849702785129837E-5 0.0 0.011915432485469758 7.206413807687653E-4 36-37 0.0 2.4849702785129837E-5 0.0 0.019631265200252573 7.206413807687653E-4 38-39 0.0 2.4849702785129837E-5 0.0 0.030975154521664345 7.454910835538952E-4 40-41 0.0 2.4849702785129837E-5 0.0 0.04260481542510511 7.454910835538952E-4 42-43 0.0 2.4849702785129837E-5 0.0 0.05424690117993844 7.579159349464602E-4 44-45 0.0 2.4849702785129837E-5 0.0 0.06665932772111079 7.827656377315899E-4 46-47 0.0 2.4849702785129837E-5 0.0 0.07923327733038649 7.951904891241548E-4 48-49 0.0 2.4849702785129837E-5 0.0 0.09247816891486069 8.076153405167197E-4 50-51 0.0 2.4849702785129837E-5 0.0 0.10617035514946724 8.448898946944145E-4 52-53 0.0 2.4849702785129837E-5 0.0 0.11817276159468496 9.194390030498041E-4 54-55 0.0 4.9699405570259674E-5 1.2424851392564919E-5 0.13212586970853535 0.0010312626655828883 56-57 0.0 4.9699405570259674E-5 2.4849702785129837E-5 0.14704811623100583 0.0011058117739382778 58-59 0.0 7.454910835538951E-5 2.4849702785129837E-5 0.16147336869777368 0.0011182366253308428 60-61 0.0 7.454910835538951E-5 2.4849702785129837E-5 0.1765944128425252 0.0011182366253308428 62-63 0.0 7.454910835538951E-5 2.4849702785129837E-5 0.19233669955690497 0.0012673348420416217 64-65 0.0 7.454910835538951E-5 2.4849702785129837E-5 0.20843930696166907 0.0012921845448267515 66-67 0.0 7.454910835538951E-5 2.4849702785129837E-5 0.22465373802896632 0.0013294590990044464 68-69 0.0 7.454910835538951E-5 2.4849702785129837E-5 0.24252067433147467 0.0013418839503970112 70-71 0.0 7.454910835538951E-5 2.4849702785129837E-5 0.2604248851881607 0.001391583355967271 72-73 0.0 7.454910835538951E-5 2.4849702785129837E-5 0.277894226246107 0.0014909821671077904 74-75 0.0 8.697395974795443E-5 2.4849702785129837E-5 0.2943447294898629 0.0015158318698929203 76-77 0.0 9.939881114051935E-5 2.4849702785129837E-5 0.31239803856325976 0.00154068157267805 78-79 0.0 9.939881114051935E-5 2.4849702785129837E-5 0.33103531565210714 0.0015655312754631798 80-81 0.0 1.1182366253308427E-4 2.4849702785129837E-5 0.3502565607564051 0.0015903809782483098 82-83 0.0 1.242485139256492E-4 2.4849702785129837E-5 0.3698008519969097 0.001689779789388829 84-85 0.0 1.242485139256492E-4 2.4849702785129837E-5 0.3896184899680507 0.001689779789388829 86-87 0.0 1.242485139256492E-4 2.4849702785129837E-5 0.4094237030877992 0.0017022046407813938 88-89 0.0 1.4909821671077903E-4 2.4849702785129837E-5 0.43132871609289114 0.0017146294921739588 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 4515 0.0 34.384235 1 TACCTGG 4745 0.0 31.724443 2 GTATCAA 9060 0.0 28.383442 1 GTACATG 12150 0.0 26.142616 1 TACATGG 12785 0.0 24.439716 2 TCAACGC 10480 0.0 24.153505 4 CAACGCA 10745 0.0 23.680393 5 ACATGGG 12785 0.0 23.066595 3 ATCAACG 11010 0.0 23.032791 3 TATCAAC 11095 0.0 23.026396 2 ACCTGGG 6240 0.0 22.67902 3 AACGCAG 11480 0.0 22.206448 6 GTATAGG 925 0.0 22.137379 1 GGTATCA 6600 0.0 21.862417 1 GAGTACA 9855 0.0 21.841442 1 AGTACAT 9035 0.0 20.655485 2 CATGGGG 9730 0.0 20.255804 4 TATCACG 365 5.456968E-12 19.51504 2 ACGCAGA 13430 0.0 18.770742 7 CGCAGAG 14250 0.0 17.757454 8 >>END_MODULE