##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921460_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6098260 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.61331494557464 31.0 31.0 34.0 28.0 34.0 2 30.72570798883616 31.0 31.0 34.0 27.0 34.0 3 30.857987360329012 31.0 31.0 34.0 27.0 34.0 4 34.38443359253295 37.0 35.0 37.0 31.0 37.0 5 34.37459750814167 37.0 35.0 37.0 31.0 37.0 6 34.46987878509608 37.0 35.0 37.0 32.0 37.0 7 34.36041264229469 37.0 35.0 37.0 31.0 37.0 8 34.346560986248534 37.0 35.0 37.0 31.0 37.0 9 35.82574258886961 39.0 37.0 39.0 31.0 39.0 10-11 35.7084386365947 39.0 37.0 39.0 30.0 39.0 12-13 35.5564077294179 39.0 36.0 39.0 30.0 39.0 14-15 36.597486578138685 40.0 37.0 41.0 30.0 41.0 16-17 36.46436877076412 40.0 36.5 41.0 30.0 41.0 18-19 36.288895521017466 40.0 36.0 41.0 29.5 41.0 20-21 36.17347013738345 39.0 36.0 41.0 29.0 41.0 22-23 36.208157654806456 39.5 36.5 41.0 29.0 41.0 24-25 36.07711084801238 39.0 36.0 41.0 28.5 41.0 26-27 35.818323423402745 39.0 36.0 41.0 27.0 41.0 28-29 35.59201534536081 39.0 36.0 40.0 27.0 41.0 30-31 35.348827534411456 39.0 35.0 40.0 26.5 41.0 32-33 35.08488413088324 38.5 35.0 40.0 25.0 41.0 34-35 34.66808737246362 38.0 34.5 40.0 24.5 41.0 36-37 34.286422274550446 38.0 34.0 40.0 22.5 41.0 38-39 34.05621046003286 38.0 33.5 40.0 21.0 41.0 40-41 33.795206501526664 38.0 33.0 40.0 19.0 41.0 42-43 33.5085197252987 38.0 33.0 40.0 17.5 41.0 44-45 33.19376658259897 38.0 32.5 40.0 15.5 41.0 46-47 32.906785952058456 38.0 32.0 40.0 14.5 41.0 48-49 32.7004541459367 37.0 32.0 40.0 10.5 41.0 50-51 31.94614562186591 36.0 30.5 39.0 10.5 40.0 52-53 32.469539999934405 37.0 31.5 39.0 12.0 40.0 54-55 32.916444936752455 37.0 33.0 40.0 10.0 41.0 56-57 32.75993603093342 37.0 32.0 40.0 8.0 41.0 58-59 32.432215418824384 37.0 32.0 40.0 7.0 41.0 60-61 31.968737721907562 36.0 31.0 39.0 3.5 40.5 62-63 31.489221187683043 35.5 31.0 39.0 2.0 40.0 64-65 30.942708739870064 35.0 30.0 38.5 2.0 40.0 66-67 30.450698969870096 35.0 29.5 38.0 2.0 40.0 68-69 29.927839744451695 34.5 29.0 37.0 2.0 39.5 70-71 29.398917724072113 34.0 28.5 36.5 2.0 39.0 72-73 28.842786302978226 34.0 28.0 36.0 2.0 39.0 74-75 28.24396663966443 34.0 26.5 35.5 2.0 38.0 76-77 27.658879254082315 33.0 26.0 35.0 2.0 37.0 78-79 27.085974933833583 33.0 25.5 35.0 2.0 36.5 80-81 26.49195229458895 32.5 24.5 35.0 2.0 36.0 82-83 25.850903618409184 32.0 22.5 34.5 2.0 35.5 84-85 25.22477206613034 31.5 20.0 34.0 2.0 35.0 86-87 24.592090694722756 31.0 18.0 34.0 2.0 35.0 88-89 23.925379206527765 31.0 10.0 34.0 2.0 35.0 90-91 23.167340356101576 30.0 3.5 34.0 2.0 35.0 92-93 22.33290454982241 29.5 2.0 34.0 2.0 35.0 94-95 21.40818577758246 29.0 2.0 34.0 2.0 35.0 96-97 20.49850703315372 29.0 2.0 33.5 2.0 34.5 98 19.862563747691965 27.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 162827.0 3 28796.0 4 22212.0 5 19251.0 6 18366.0 7 19035.0 8 21484.0 9 25146.0 10 28391.0 11 31239.0 12 35161.0 13 40797.0 14 34551.0 15 34314.0 16 37823.0 17 43546.0 18 48855.0 19 47986.0 20 50582.0 21 55772.0 22 61605.0 23 67984.0 24 76250.0 25 85675.0 26 97921.0 27 112205.0 28 130836.0 29 153979.0 30 183207.0 31 222665.0 32 278202.0 33 358810.0 34 486256.0 35 677248.0 36 914143.0 37 953137.0 38 413459.0 39 18544.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.56584304447085 17.335373031894616 13.189794434364199 24.90898948927033 2 16.136984377604442 18.916758211830917 38.358883949606195 26.587373460958446 3 20.21720764853655 22.219024603379957 27.690168672935496 29.873599075148 4 13.836991452475406 14.555566292987624 34.639500927074266 36.96794132746271 5 15.678059269187072 35.6802284865164 32.67965287271978 15.962059371576757 6 35.387067821167264 33.01683017716235 16.402293249059383 15.193808752610998 7 31.307126559876213 30.058077233763736 19.490619252073106 19.14417695428694 8 28.050141788486677 33.19479228683753 18.990390529283545 19.764675395392242 9 26.84236749048226 16.403178844265952 19.172580779006427 37.58187288624536 10-11 26.817298540365236 24.792298136503348 26.010640797201223 22.37976252593019 12-13 26.909274259180766 21.87574029853757 26.634659120121285 24.580326322160374 14-15 23.881783360517204 23.610354636798025 24.226219030679648 28.281642972005123 16-17 24.39126692642689 26.527966427756798 24.820022179880073 24.260744465936238 18-19 24.392081493213137 26.077020976590898 25.99150737735271 23.539390152843254 20-21 24.959892208901053 25.135692795368 25.911163427504206 23.993251568226736 22-23 24.690845331895005 24.79006962607296 25.84636927720395 24.672715764828084 24-25 24.5623432969899 24.981607305323163 25.968113750088918 24.48793564759802 26-27 24.495067091478294 25.058628780344943 26.111095292046777 24.335208836129986 28-29 24.415218726918095 25.47170686110044 25.854893677885265 24.2581807340962 30-31 24.623326647072485 25.21788730509834 25.706514030359962 24.452272017469216 32-33 24.45964759902384 25.295643398130597 25.70559546349459 24.539113539350975 34-35 24.75853429067416 25.160709626279846 25.81114550828756 24.269610574758435 36-37 24.68690181450768 25.10320014492567 25.864340398459802 24.345557642106847 38-39 24.62198582408191 25.335679358591857 25.74203423971096 24.300300577615275 40-41 24.74507761819496 25.304283474315163 25.680374270363576 24.270264637126303 42-43 24.61936345983179 25.212056830711354 25.600921445440882 24.56765826401598 44-45 24.678607901970054 25.159204383551533 25.560091537163732 24.602096177314685 46-47 24.840632484612062 25.260852314093206 25.594366524478353 24.304148676816382 48-49 24.779829585248077 25.305038319094752 25.509396936911344 24.405735158745827 50-51 24.441483257827194 25.510452398169726 25.63909920043841 24.40896514356467 52-53 24.671380442555876 25.496080911929326 25.377020008516364 24.45551863699843 54-55 24.59449933112229 25.26875279557902 25.570141464027984 24.566606409270708 56-57 24.619279048665327 25.330431220840488 25.547966035064352 24.50232369542983 58-59 24.866525537548025 25.252257587997235 25.453429203576285 24.42778767087846 60-61 24.686108268285764 25.32305955160337 25.69250827184576 24.298323908265104 62-63 24.44114646824744 25.471495257664255 25.624231097600525 24.463127176487777 64-65 24.587252690002416 25.412434063719243 25.511485834261393 24.48882741201695 66-67 24.644221234637286 25.34535651755761 25.425642456543596 24.584779791261504 68-69 24.520436423623394 25.358288089568642 25.50985978361453 24.611415703193433 70-71 24.66455339492805 25.171028550256157 25.584001233629657 24.58041682118614 72-73 24.692820379523358 25.172890972277816 25.57907604138973 24.5552126068091 74-75 24.47302760171431 25.615422487411006 25.410722886278375 24.500827024596315 76-77 24.665945722650022 25.225801494315835 25.379337698363578 24.728915084670568 78-79 24.596853522643638 25.202725121049557 25.57616970926942 24.624251647037383 80-81 24.67521922635313 25.30741757379813 25.464637498631987 24.552725701216758 82-83 24.784102832358997 25.142991797847326 25.524852358698535 24.548053011095142 84-85 24.64494868978932 25.31587516527179 25.41998260045618 24.61919354448271 86-87 24.61731883411188 25.37966753935582 25.464436078017027 24.53857754851527 88-89 24.542249864165495 25.206650879088304 25.40378284170316 24.847316415043043 90-91 24.656987365171513 25.0726886380091 25.470182753416292 24.800141243403097 92-93 24.8396968489757 25.264081274171048 25.41874797948449 24.477473897368764 94-95 24.818941999674866 25.107112909928308 25.459412388944425 24.6145327014524 96-97 24.61469035978593 25.053489036620906 25.639006852163398 24.692813751429764 98 24.760733440072936 25.229928765971827 25.207547704269594 24.801790089685642 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 646.0 1 493.0 2 560.0 3 778.0 4 632.5 5 589.5 6 977.5 7 2065.5 8 3047.0 9 2969.5 10 2388.0 11 2163.0 12 2455.0 13 2776.5 14 3174.0 15 3689.5 16 4081.5 17 4217.5 18 4298.0 19 4272.5 20 4038.5 21 3813.0 22 3698.5 23 3876.0 24 4353.5 25 5264.5 26 6731.5 27 9202.0 28 12964.5 29 18050.5 30 24754.5 31 33324.0 32 43454.5 33 54004.5 34 65893.0 35 78954.0 36 93038.5 37 107911.5 38 123268.0 39 138244.5 40 152967.0 41 169043.5 42 185544.0 43 201745.5 44 216696.5 45 233453.5 46 255802.0 47 276446.5 48 282527.5 49 277133.0 50 273625.0 51 272021.0 52 270711.0 53 271552.5 54 267441.5 55 257336.5 56 242275.0 57 224909.5 58 207135.0 59 185047.0 60 161705.0 61 137340.5 62 111901.0 63 86527.0 64 64386.5 65 48956.0 66 37649.5 67 28899.0 68 22224.5 69 17119.0 70 12997.0 71 9861.5 72 7753.0 73 5944.0 74 4552.0 75 3511.5 76 2440.0 77 1542.5 78 930.0 79 540.5 80 299.5 81 176.5 82 114.0 83 68.5 84 48.5 85 39.0 86 29.5 87 20.5 88 17.0 89 20.5 90 15.5 91 11.5 92 11.0 93 6.0 94 4.0 95 4.0 96 6.5 97 6.5 98 2.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4604920091960658 2 0.047685733307533625 3 0.05652432005194925 4 0.053769435871871656 5 0.06388707598560901 6 0.06313276246011157 7 0.04237274238881255 8 0.018857838137435926 9 0.011445887843417631 10-11 0.014405748524989095 12-13 0.010421005335948287 14-15 0.014676317506961002 16-17 0.013807217140627 18-19 0.05449095315713007 20-21 0.08186761469665117 22-23 0.09842151695729602 24-25 0.06769963891339496 26-27 0.08280230754346321 28-29 0.08442572143529466 30-31 0.05613896422914077 32-33 0.031771357731549654 34-35 0.3901932682437285 36-37 0.6103708270883826 38-39 0.5592168913755727 40-41 0.5537153220754772 42-43 0.5270109834608561 44-45 0.5118837176506085 46-47 0.5018234709572894 48-49 0.49204199230600204 50-51 0.506250963389557 52-53 0.587323269260412 54-55 0.5574950887630242 56-57 0.515146943554391 58-59 0.4928946945522165 60-61 0.5057426216658523 62-63 0.5177952399536917 64-65 0.5369564433133386 66-67 0.5626031031802514 68-69 0.5164423950438322 70-71 0.46516547343012593 72-73 0.44901332511240916 74-75 0.4294913631101331 76-77 0.44362654265315027 78-79 0.4374444513680952 80-81 0.43472236342825654 82-83 0.45454769065274353 84-85 0.4212185115098405 86-87 0.4237602201283645 88-89 0.450185790700954 90-91 0.43409103580365543 92-93 0.42915520164768306 94-95 0.44050270077038367 96-97 0.4338122677616238 98 0.42900761856660746 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 6098260.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.89176623289333 #Duplication Level Percentage of deduplicated Percentage of total 1 71.89221570710077 37.30614051437615 2 14.690879061977814 15.246713240797199 3 5.548303871557055 8.637338624756872 4 2.5488176597892207 5.290506006882099 5 1.4485741468842919 3.7584535500566276 6 0.8618643703159132 2.6834198657335904 7 0.6012644204503171 2.1840470925114763 8 0.41307257595734675 1.7148052439038168 9 0.30556744643111955 1.427079104872723 >10 1.5641677039123596 14.55452251041688 >50 0.09102535698684873 3.2453318416582326 >100 0.033043231229903144 2.809791979139149 >500 6.022298292113022E-4 0.22977415278029886 >1k 5.388262540031229E-4 0.6450521030454158 >5k 3.1695661958229266E-5 0.09477014241937347 >10k+ 3.1695661958229266E-5 0.17225402665013856 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 10473 0.171737512011623 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.63981201195095E-5 2 0.0 0.0 0.0 0.0 1.63981201195095E-5 3 0.0 0.0 0.0 0.0 1.63981201195095E-5 4 0.0 0.0 0.0 0.0 3.2796240239019E-5 5 0.0 0.0 0.0 0.0 3.2796240239019E-5 6 1.63981201195095E-5 0.0 0.0 0.0 4.9194360358528496E-5 7 1.63981201195095E-5 0.0 0.0 0.0 4.9194360358528496E-5 8 1.63981201195095E-5 0.0 0.0 0.0 4.9194360358528496E-5 9 1.63981201195095E-5 0.0 0.0 0.0 4.9194360358528496E-5 10-11 1.63981201195095E-5 0.0 0.0 0.0 8.199060059754749E-5 12-13 1.63981201195095E-5 0.0 0.0 0.0 1.7218026125484975E-4 14-15 1.63981201195095E-5 1.63981201195095E-5 0.0 1.63981201195095E-5 2.5417086185239724E-4 16-17 1.63981201195095E-5 1.63981201195095E-5 0.0 4.0995300298773745E-5 3.3616146244994473E-4 18-19 1.63981201195095E-5 1.63981201195095E-5 0.0 5.7393420418283246E-5 4.181520630474922E-4 20-21 1.63981201195095E-5 3.2796240239019E-5 0.0 6.5592480478038E-5 4.5914736334626597E-4 22-23 1.63981201195095E-5 3.2796240239019E-5 0.0 9.838872071705699E-5 4.919436035852849E-4 24-25 1.63981201195095E-5 4.9194360358528496E-5 0.0 1.6398120119509498E-4 5.24739843824304E-4 26-27 1.63981201195095E-5 4.9194360358528496E-5 8.19906005975475E-6 2.62369921912152E-4 5.739342041828324E-4 28-29 1.63981201195095E-5 4.9194360358528496E-5 1.63981201195095E-5 6.723229248998895E-4 5.985313843620967E-4 30-31 1.63981201195095E-5 4.9194360358528496E-5 1.63981201195095E-5 0.0022711396365520655 6.067304444218515E-4 32-33 1.63981201195095E-5 4.9194360358528496E-5 1.63981201195095E-5 0.006026309143919741 7.051191651389084E-4 34-35 1.63981201195095E-5 8.199060059754749E-5 1.63981201195095E-5 0.011216314161744498 7.21517285258418E-4 36-37 1.63981201195095E-5 9.838872071705699E-5 1.63981201195095E-5 0.01880044471701764 7.21517285258418E-4 38-39 1.63981201195095E-5 1.2298590089632124E-4 1.63981201195095E-5 0.030992447025872956 7.789107056767012E-4 40-41 1.63981201195095E-5 1.475830810755855E-4 1.63981201195095E-5 0.044340516803153686 8.035078858559655E-4 42-43 1.63981201195095E-5 1.803793213146045E-4 1.63981201195095E-5 0.05797555368252584 8.199060059754749E-4 44-45 3.2796240239019E-5 1.803793213146045E-4 1.63981201195095E-5 0.07261907494924782 8.936975465132677E-4 46-47 4.9194360358528496E-5 1.803793213146045E-4 1.63981201195095E-5 0.08797591444116847 9.838872071705699E-4 48-49 4.9194360358528496E-5 1.803793213146045E-4 1.63981201195095E-5 0.10266863006824897 0.001049479687648608 50-51 4.9194360358528496E-5 1.803793213146045E-4 1.63981201195095E-5 0.11802546956016963 0.0010658778077681174 52-53 4.9194360358528496E-5 1.9677744143411398E-4 1.63981201195095E-5 0.13364467897400242 0.0011314702882461555 54-55 4.9194360358528496E-5 1.9677744143411398E-4 1.63981201195095E-5 0.1497886282316595 0.0012626552492022314 56-57 4.9194360358528496E-5 1.9677744143411398E-4 1.63981201195095E-5 0.1679823425042553 0.0013036505495010052 58-59 4.9194360358528496E-5 1.9677744143411398E-4 1.63981201195095E-5 0.1861432605366121 0.001336446789740024 60-61 9.838872071705699E-5 2.131755615536235E-4 1.63981201195095E-5 0.2036810500044275 0.0013856411500985527 62-63 9.838872071705699E-5 2.2957368167313299E-4 1.63981201195095E-5 0.22115324699176486 0.001443034570516836 64-65 9.838872071705699E-5 2.2957368167313299E-4 1.63981201195095E-5 0.2394289518649582 0.0014594326906363455 66-67 9.838872071705699E-5 2.4597180179264247E-4 3.2796240239019E-5 0.25872134018556114 0.0015168261110546288 68-69 1.0658778077681175E-4 2.4597180179264247E-4 3.2796240239019E-5 0.2797519292388321 0.0015742195314729119 70-71 1.1478684083656649E-4 2.5417086185239724E-4 3.2796240239019E-5 0.3003643662290555 0.0016152148317716856 72-73 1.1478684083656649E-4 2.62369921912152E-4 3.2796240239019E-5 0.3201896934535425 0.0018775847536838376 74-75 1.1478684083656649E-4 2.62369921912152E-4 3.2796240239019E-5 0.3412612778071122 0.002000570654580159 76-77 1.1478684083656649E-4 2.62369921912152E-4 3.2796240239019E-5 0.36266902362313186 0.0020415659548789324 78-79 1.1478684083656649E-4 2.62369921912152E-4 3.2796240239019E-5 0.38676606113875106 0.002074362195117952 80-81 1.1478684083656649E-4 2.787680420316615E-4 3.2796240239019E-5 0.41251110972638094 0.0020907603152374612 82-83 1.31184960956076E-4 2.95166162151171E-4 3.2796240239019E-5 0.43699350306480866 0.0021399546755959896 84-85 1.475830810755855E-4 2.95166162151171E-4 3.2796240239019E-5 0.4610167490398901 0.0021481537356557445 86 1.475830810755855E-4 2.95166162151171E-4 3.2796240239019E-5 0.47966141161577236 0.0021481537356557445 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 6550 0.0 25.791235 1 GTACATG 18625 0.0 25.678322 1 TACATGG 19030 0.0 24.213453 2 TACCTGG 7015 0.0 23.594404 2 ACATGGG 19705 0.0 22.895393 3 GAGTACA 14455 0.0 20.63499 1 CATGGGG 15180 0.0 20.447788 4 AGTACAT 13585 0.0 19.878569 2 GTATCAA 22760 0.0 18.86934 1 ACCTGGG 8915 0.0 17.331573 3 AGAGTAC 16760 0.0 17.23435 10-11 TCAACGC 25515 0.0 16.603739 4 TATCAAC 25770 0.0 16.43944 2 CAACGCA 25930 0.0 16.302637 5 ATCAACG 26195 0.0 16.190222 3 GTATAGG 1345 0.0 16.08507 1 AACGCAG 26585 0.0 16.000116 6 GTGTAGC 3305 0.0 15.87745 1 GTATATA 1445 0.0 15.609019 1 TATACCG 480 3.8198777E-11 15.282987 5 >>END_MODULE