##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921460_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6098260 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.521399218793558 33.0 31.0 34.0 30.0 34.0 2 31.64760981001138 33.0 31.0 34.0 29.0 34.0 3 31.776693843817746 34.0 31.0 34.0 29.0 34.0 4 35.3742315021006 37.0 35.0 37.0 33.0 37.0 5 35.10841387543332 37.0 35.0 37.0 32.0 37.0 6 35.13915887482659 37.0 35.0 37.0 32.0 37.0 7 35.05074250687901 37.0 35.0 37.0 32.0 37.0 8 34.993347282667514 37.0 35.0 37.0 32.0 37.0 9 36.54762292850748 39.0 37.0 39.0 32.0 39.0 10-11 36.42945249956545 39.0 37.0 39.0 32.0 39.0 12-13 36.28643908262357 39.0 37.0 39.0 32.0 39.0 14-15 37.464862272189116 40.0 38.0 41.0 32.0 41.0 16-17 37.33870612273009 40.0 37.5 41.0 32.0 41.0 18-19 37.21070772646624 40.0 37.0 41.0 31.5 41.0 20-21 37.076446642156945 40.0 37.0 41.0 31.0 41.0 22-23 37.026327263842475 40.0 37.0 41.0 31.0 41.0 24-25 37.06889170025548 40.0 37.0 41.0 31.0 41.0 26-27 36.93210071397415 40.0 37.0 41.0 31.0 41.0 28-29 36.770210109113094 40.0 37.0 41.0 30.0 41.0 30-31 36.604791120745915 39.5 36.0 41.0 30.0 41.0 32-33 36.41006688793197 39.0 36.0 41.0 30.0 41.0 34-35 36.229003437045975 39.0 36.0 40.0 30.0 41.0 36-37 36.098346249585944 39.0 35.5 40.0 29.5 41.0 38-39 36.0369370935316 39.0 35.0 40.0 29.0 41.0 40-41 35.84251581598686 39.0 35.0 40.0 28.5 41.0 42-43 35.55507612007359 39.0 35.0 40.0 27.5 41.0 44-45 35.30678398428404 38.0 35.0 40.0 27.0 41.0 46-47 34.987019740057 38.0 34.0 40.0 26.0 41.0 48-49 34.59393023583776 38.0 34.0 40.0 24.5 41.0 50-51 34.26315760561209 38.0 33.0 40.0 24.0 41.0 52-53 33.90100405689492 38.0 33.0 40.0 23.0 41.0 54-55 33.52121113235579 37.0 33.0 40.0 22.0 41.0 56-57 33.07555753608406 37.0 32.0 39.0 20.5 40.5 58-59 32.62559287403292 36.0 31.5 39.0 18.5 40.0 60-61 32.12984925208174 35.5 31.0 39.0 17.0 40.0 62-63 31.64288026420651 35.0 30.5 38.5 13.5 40.0 64-65 31.060006050906324 35.0 30.0 38.0 8.0 40.0 66-67 30.466962871376424 34.0 29.0 37.5 7.5 39.5 68-69 29.907046928140158 34.0 28.5 37.0 6.5 39.0 70-71 29.28681017208187 34.0 28.0 36.0 2.0 39.0 72-73 28.67343865299282 33.0 26.5 35.5 2.0 38.0 74-75 28.102660185036388 33.0 26.0 35.0 2.0 37.5 76-77 27.03123661503445 31.5 25.5 34.0 2.0 36.0 78-79 27.976022914733058 33.0 26.5 35.0 2.0 36.0 80-81 27.97166708208571 33.0 27.0 35.0 2.0 36.0 82-83 27.56330658253338 33.0 26.0 35.0 2.0 36.0 84-85 26.97191821929534 32.5 25.5 35.0 2.0 35.0 86-87 26.353772059571092 32.0 24.5 34.0 2.0 35.0 88-89 25.711406204392727 31.5 23.5 34.0 2.0 35.0 90-91 25.09167811802055 31.0 20.0 34.0 2.0 35.0 92-93 24.512309576830113 31.0 18.5 34.0 2.0 35.0 94-95 23.84761653324063 31.0 11.0 34.0 2.0 35.0 96-97 22.876416715587723 30.0 2.0 34.0 2.0 35.0 98-99 21.64297037187657 29.5 2.0 34.0 2.0 35.0 100-101 18.166527747259053 23.5 2.0 31.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 63242.0 3 31131.0 4 17943.0 5 13359.0 6 11783.0 7 11770.0 8 13960.0 9 16261.0 10 19144.0 11 22658.0 12 26480.0 13 31071.0 14 34551.0 15 38781.0 16 43360.0 17 49839.0 18 50201.0 19 47150.0 20 48518.0 21 51733.0 22 55259.0 23 60559.0 24 68141.0 25 78625.0 26 93319.0 27 112447.0 28 135493.0 29 164579.0 30 199506.0 31 246128.0 32 311898.0 33 408552.0 34 552200.0 35 768802.0 36 1007482.0 37 919730.0 38 267893.0 39 4712.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.82560197851802 18.030209375393728 13.687693903418294 24.456494742669953 2 16.382164748633215 19.498889847267908 37.76500182019134 26.35394358390754 3 20.374841256513733 22.636460361357898 27.96499378145351 29.023704600674854 4 14.24849978227277 15.076109366996226 34.58678259534139 36.08860825538961 5 15.697818856411121 35.730211899433655 32.7274847115299 15.844484532625325 6 35.39979036299887 33.28517392520015 16.253611545393564 15.061424166407411 7 31.275309839118158 30.210739667202024 19.464803723566877 19.049146770112937 8 28.015207729868273 33.320841339863975 18.941818171073667 19.722132759194093 9 26.787541431122985 16.415095454484277 19.161047046585043 37.6363160678077 10-11 26.79744816534565 24.91708113106803 26.038929479527035 22.246541224059282 12-13 26.91480094066977 21.953756831694218 26.69063889138514 24.440803336250873 14-15 23.906485145269656 23.61249753765996 24.315498183590925 28.165519133479467 16-17 24.326867831706398 26.59041538629995 24.949473616004404 24.13324316598925 18-19 24.327134566852976 26.08788729030319 26.181695566757174 23.403282576086657 20-21 24.95658406231785 25.10570935060583 26.06927867336149 23.868427913714825 22-23 24.63385359458961 24.812978350577445 26.06914012160765 24.484027933225295 24-25 24.475926995046844 24.973038605174207 26.196904260207948 24.354130139570994 26-27 24.45039965156626 25.03875472496836 26.30057232259447 24.210273300870913 28-29 24.334975668411353 25.453971234451085 26.10628809473549 24.104765002402075 30-31 24.569319890912823 25.172856245967466 25.930974588059463 24.32684927506025 32-33 24.389126770139477 25.246499611630536 25.949861186512376 24.414512431717615 34-35 24.658381176655034 25.132325046449367 26.031539242593414 24.177754534302178 36-37 24.572813292119086 25.09830968674724 26.072812964119464 24.256064057014207 38-39 24.527322789969634 25.30005468846803 25.99368552794217 24.17893699362017 40-41 24.668346175672706 25.290797799580776 25.857705895667067 24.183150129079454 42-43 24.530233996650725 25.237387906532526 25.769698637397354 24.46267945941939 44-45 24.593854027305866 25.11746180651367 25.799202365923552 24.48948180025691 46-47 24.723439093944886 25.261532539141207 25.778057304946767 24.236971061967143 48-49 24.705787048292077 25.338616188359914 25.635085993708028 24.320510769639977 50-51 24.42169667347673 25.544537260583176 25.724141900785163 24.30962416515493 52-53 24.653905573177564 25.482078982059882 25.494951803990705 24.369063640771852 54-55 24.5798420097233 25.26019248664344 25.63474766086477 24.525217842768495 56-57 24.664277814802375 25.320864971872965 25.583162021683002 24.43169519164165 58-59 24.85627290331605 25.2452736377964 25.516288524347146 24.382164934540402 60-61 24.669479917562157 25.30800013611182 25.790098357187752 24.23242158913828 62-63 24.47681455580776 25.460584580867785 25.67452963249669 24.38807123082777 64-65 24.557847331988548 25.405996573719115 25.578991534004807 24.45716456028753 66-67 24.67458914303314 25.316728859623545 25.45570643447963 24.552975562863686 68-69 24.527257343977674 25.365265810040533 25.54895395793812 24.558522888043672 70-71 24.66707426333708 25.211843941424817 25.619016943087292 24.502064852150813 72-73 24.74303417659394 25.20035805113104 25.603255791675522 24.453351980599493 74-75 24.47367652545295 25.618075910805967 25.38472038516828 24.5235271785728 76-77 24.600529973327 25.256640044103047 25.499522556923942 24.64330742564601 78-79 24.562943575185226 25.260479656052315 25.643219914833566 24.533356853928897 80-81 24.631272755188434 25.32273604149551 25.55802728371237 24.487963919603686 82-83 24.70386685523134 25.189639046928264 25.615426808004877 24.491067289835517 84-85 24.56818985475775 25.36763234600444 25.51315177450877 24.551026024729037 86-87 24.542156323483407 25.408810617309264 25.536361417848756 24.512671641358573 88-89 24.479774162026747 25.266867693933637 25.48146288666837 24.771895257371245 90-91 24.601009593502663 25.204921801164197 25.491209732344757 24.702858872988383 92-93 24.756501083520757 25.348167891003833 25.54653856584146 24.34879245963395 94-95 24.69187876159972 25.20451286599429 25.4975403517527 24.60606802065329 96-97 24.468278755666926 25.1585262759137 25.71557187451059 24.65762309390879 98-99 24.535738449149 25.260251408194367 25.459058695668396 24.744951446988235 100-101 25.135660494289784 24.54207357161869 25.63727920372058 24.684986730370944 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 179.0 1 169.5 2 350.5 3 556.0 4 444.5 5 387.5 6 747.5 7 1731.0 8 2650.0 9 2494.5 10 1748.5 11 1341.0 12 1346.5 13 1472.5 14 1627.0 15 1714.0 16 1797.5 17 1977.0 18 2221.0 19 2398.0 20 2518.5 21 2718.5 22 3038.5 23 3407.0 24 3967.5 25 4931.5 26 6457.5 27 8557.5 28 11592.0 29 15857.0 30 21990.5 31 29326.5 32 37812.0 33 47412.0 34 57627.0 35 68952.5 36 82586.5 37 97066.5 38 110394.0 39 124593.0 40 140028.0 41 154894.0 42 169870.5 43 185667.0 44 201282.0 45 216458.5 46 231478.0 47 250820.0 48 275600.5 49 283677.5 50 273019.5 51 267402.0 52 266992.5 53 266089.5 54 263685.5 55 255179.0 56 240025.5 57 221788.0 58 203721.5 59 183952.5 60 161278.5 61 138429.0 62 113916.0 63 87872.5 64 65555.0 65 49663.5 66 38265.0 67 29809.0 68 22947.0 69 17603.0 70 13703.0 71 10491.0 72 7927.5 73 6204.0 74 4668.5 75 3494.0 76 2655.5 77 1723.5 78 1032.5 79 599.0 80 337.5 81 174.0 82 92.5 83 52.5 84 26.5 85 15.5 86 8.5 87 5.0 88 5.5 89 3.0 90 0.5 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3043163131778573 2 0.0 3 0.006100100684457534 4 0.05703266177565404 5 6.067304444218515E-4 6 0.0642150383879992 7 0.07433267850173655 8 0.1042592477198414 9 0.09212463883140437 10-11 0.09607658578020616 12-13 0.09498611079225877 14-15 0.06486276413271982 16-17 0.03587088776142703 18-19 0.037978046196784 20-21 0.028016188224181983 22-23 0.041134684319789575 24-25 0.03350955846421766 26-27 0.020686228530761235 28-29 0.023826468533647303 30-31 0.003304221204081164 32-33 0.00540318057937838 34-35 0.008059676038738918 36-37 0.011347499122700574 38-39 0.016340726699091215 40-41 0.02033366894819178 42-43 0.0036731789067701278 44-45 0.013979397401881848 46-47 0.023883861954065586 48-49 0.0027630832401373505 50-51 0.006920006690433009 52-53 0.0023121349368508395 54-55 0.0037141742070689017 56-57 0.0034764014653360137 58-59 0.0011642665284851744 60-61 0.005452374939736908 62-63 0.01475830810755855 64-65 0.006469058387146498 66-67 0.03792065277636572 68-69 0.06053366042116932 70-71 0.011954229567122426 72-73 0.03154998310993628 74-75 0.05007985884498201 76-77 0.2944118486256736 78-79 0.07067589771508594 80-81 0.03255846749728611 82-83 0.02751604556053694 84-85 0.01862826445576279 86-87 0.11415551321196538 88-89 0.5125314433953292 90-91 0.12934837150269093 92-93 0.046783836700960604 94-95 0.008830387684355866 96-97 0.006149295044816061 98-99 0.010601384657262892 100-101 0.00821545817987426 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 6098260.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.28046418776787 #Duplication Level Percentage of deduplicated Percentage of total 1 69.26370739237 34.13347651661722 2 15.837395535936446 15.609484070724614 3 6.13273493015051 9.066720722950658 4 2.884091782841857 5.685175272742947 5 1.5690436316811631 3.86615992500544 6 1.007307483600309 2.9784348222981363 7 0.6627047718726652 2.2860879144133626 8 0.4416045219994596 1.7409980665240572 9 0.327053179886542 1.45055992670049 >10 1.7268718989873815 15.217932642869664 >50 0.10652121991795904 3.5917409559365994 >100 0.03943141708927787 3.1305972957279833 >500 8.99369174418394E-4 0.2942748275956561 >1k 5.662471769423605E-4 0.6584577118158111 >5k 3.330865745564921E-5 0.10966635020017682 >10k+ 3.330865745564921E-5 0.18023297787725512 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 10980 0.1800513589122143 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6681 0.10955584051844296 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.199060059754749E-5 2 0.0 0.0 0.0 0.0 8.199060059754749E-5 3 0.0 0.0 0.0 0.0 8.199060059754749E-5 4 0.0 0.0 0.0 0.0 9.838872071705699E-5 5 1.63981201195095E-5 0.0 0.0 0.0 9.838872071705699E-5 6 1.63981201195095E-5 0.0 0.0 0.0 1.31184960956076E-4 7 1.63981201195095E-5 0.0 0.0 0.0 1.31184960956076E-4 8 1.63981201195095E-5 0.0 0.0 0.0 1.475830810755855E-4 9 1.63981201195095E-5 0.0 0.0 0.0 1.6398120119509498E-4 10-11 3.2796240239019E-5 0.0 0.0 0.0 1.6398120119509498E-4 12-13 4.9194360358528496E-5 8.19906005975475E-6 0.0 0.0 2.3777274173288773E-4 14-15 4.9194360358528496E-5 1.63981201195095E-5 0.0 1.63981201195095E-5 2.7876804203166145E-4 16-17 4.9194360358528496E-5 1.63981201195095E-5 0.0 4.0995300298773745E-5 3.197633423304352E-4 18-19 4.9194360358528496E-5 1.63981201195095E-5 0.0 5.7393420418283246E-5 3.443605225096995E-4 20-21 4.9194360358528496E-5 1.63981201195095E-5 0.0 6.5592480478038E-5 4.0175394292798274E-4 22-23 4.9194360358528496E-5 1.63981201195095E-5 0.0 9.838872071705699E-5 5.083417237047945E-4 24-25 4.9194360358528496E-5 1.63981201195095E-5 0.0 1.5578214113534027E-4 5.57536084063323E-4 26-27 4.9194360358528496E-5 1.63981201195095E-5 0.0 2.62369921912152E-4 5.739342041828324E-4 28-29 4.9194360358528496E-5 1.63981201195095E-5 0.0 6.641238648401347E-4 5.739342041828324E-4 30-31 6.5592480478038E-5 1.63981201195095E-5 0.0 0.0022547415164325562 5.739342041828324E-4 32-33 6.5592480478038E-5 1.63981201195095E-5 0.0 0.005796735462246608 5.90332324302342E-4 34-35 6.5592480478038E-5 1.63981201195095E-5 0.0 0.010757166798398232 6.067304444218515E-4 36-37 6.5592480478038E-5 4.099530029877375E-5 0.0 0.018136320852177507 6.067304444218515E-4 38-39 6.5592480478038E-5 6.5592480478038E-5 0.0 0.030049555119001155 6.067304444218515E-4 40-41 6.5592480478038E-5 6.5592480478038E-5 0.0 0.043004070013413664 6.067304444218515E-4 42-43 6.5592480478038E-5 8.199060059754749E-5 0.0 0.05628654731021636 6.149295044816062E-4 44-45 6.5592480478038E-5 8.199060059754749E-5 0.0 0.07036433343281526 6.395266846608704E-4 46-47 6.5592480478038E-5 8.199060059754749E-5 0.0 0.08536861334216646 6.969201050791537E-4 48-49 6.5592480478038E-5 9.018966065730223E-5 0.0 0.09965137596625923 7.379154053779275E-4 50-51 6.5592480478038E-5 9.838872071705699E-5 0.0 0.11439328595369827 7.54313525497437E-4 52-53 6.5592480478038E-5 1.1478684083656649E-4 0.0 0.129446760223408 7.953088257962107E-4 54-55 6.5592480478038E-5 1.5578214113534024E-4 0.0 0.1450085762168225 8.772994263937582E-4 56-57 6.5592480478038E-5 1.6398120119509498E-4 0.0 0.16261195816511595 9.428919068717961E-4 58-59 6.5592480478038E-5 1.6398120119509498E-4 0.0 0.17994477113143748 0.001008484387349834 60-61 6.5592480478038E-5 2.131755615536235E-4 0.0 0.19691682545512984 0.0010986740480071365 62-63 8.199060059754749E-5 2.131755615536235E-4 0.0 0.21352812113619296 0.0011642665284851744 64-65 8.199060059754749E-5 2.131755615536235E-4 0.0 0.230877332222634 0.0011642665284851744 66-67 9.838872071705699E-5 2.131755615536235E-4 0.0 0.2492678239366639 0.001180664648604684 68-69 9.838872071705699E-5 2.2137462161337824E-4 0.0 0.26933092390288377 0.0011970627687241935 70-71 9.838872071705699E-5 2.3777274173288773E-4 0.0 0.2889840708661159 0.0012544561891424766 72-73 1.475830810755855E-4 2.4597180179264247E-4 0.0 0.30795669584438845 0.001377442090038798 74-75 1.475830810755855E-4 2.4597180179264247E-4 0.0 0.3281591798316241 0.0014266364503973264 76-77 1.5578214113534024E-4 2.4597180179264247E-4 0.0 0.34890280178280364 0.0014266364503973264 78-79 1.6398120119509498E-4 2.4597180179264247E-4 0.0 0.3720651464516108 0.0014266364503973264 80-81 1.6398120119509498E-4 2.4597180179264247E-4 0.0 0.39653934072997876 0.0014594326906363455 82-83 1.8857838137435924E-4 2.4597180179264247E-4 0.0 0.4200378468612358 0.0015906176515924214 84-85 1.9677744143411398E-4 2.5417086185239724E-4 0.0 0.44288042818771256 0.001607015771711931 86-87 1.9677744143411398E-4 2.62369921912152E-4 0.0 0.46603457379645996 0.0016644091921302142 88-89 1.9677744143411398E-4 2.62369921912152E-4 0.0 0.4909597163781144 0.0017463997927277615 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 6715 0.0 26.526033 1 GTACATG 18800 0.0 24.927801 1 TACCTGG 7050 0.0 24.79246 2 TACATGG 19310 0.0 23.588333 2 ACATGGG 19925 0.0 22.289074 3 GAGTACA 14635 0.0 20.827349 1 AGTACAT 14005 0.0 19.737892 2 CATGGGG 14825 0.0 19.736416 4 GTATCAA 23990 0.0 19.137867 1 GTATAGG 1595 0.0 18.811638 1 ACCTGGG 9240 0.0 18.403051 3 AGAGTAC 17745 0.0 17.912907 10-11 GTGTAGC 3350 0.0 16.917994 1 TCAACGC 27025 0.0 16.64434 4 ATGGGGG 7205 0.0 16.60512 5 CAACGCA 27280 0.0 16.463503 5 TATCAAC 27910 0.0 16.337 2 ATCAACG 28015 0.0 16.089935 3 AACGCAG 28255 0.0 16.030605 6 CGTATAC 410 1.0713848E-8 15.060459 3 >>END_MODULE