##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921459_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5383041 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.061314413172777 31.0 31.0 34.0 26.0 34.0 2 30.148334185082373 31.0 31.0 34.0 26.0 34.0 3 30.28212120249502 31.0 31.0 34.0 26.0 34.0 4 33.77667307382574 37.0 35.0 37.0 30.0 37.0 5 33.75154749889514 37.0 35.0 37.0 29.0 37.0 6 33.84744608112775 37.0 35.0 37.0 30.0 37.0 7 33.72594932864156 37.0 35.0 37.0 29.0 37.0 8 33.699441821082175 37.0 35.0 37.0 29.0 37.0 9 35.10948161085899 39.0 35.0 39.0 29.0 39.0 10-11 34.968579005807314 39.0 35.0 39.0 28.0 39.0 12-13 34.795110700438656 38.0 35.0 39.0 27.0 39.0 14-15 35.75542411807749 39.0 36.0 41.0 27.0 41.0 16-17 35.604584100325454 39.0 36.0 41.0 27.0 41.0 18-19 35.41660698850334 39.0 36.0 40.5 27.0 41.0 20-21 35.28975239088835 39.0 35.5 40.0 26.0 41.0 22-23 35.311117544897016 39.0 36.0 40.0 25.5 41.0 24-25 35.16432198825905 39.0 35.0 41.0 25.0 41.0 26-27 34.87482345016507 39.0 35.0 40.0 24.0 41.0 28-29 34.62465797678301 39.0 34.0 40.0 23.5 41.0 30-31 34.355281986520254 38.0 34.0 40.0 21.5 41.0 32-33 34.06279796122675 38.0 34.0 40.0 18.5 41.0 34-35 33.622602354319795 38.0 33.0 40.0 16.5 41.0 36-37 33.21987144441218 38.0 33.0 40.0 13.5 41.0 38-39 32.96872409108532 38.0 32.0 40.0 9.0 41.0 40-41 32.685900311738294 38.0 31.5 40.0 9.0 41.0 42-43 32.376312942814295 37.5 31.0 40.0 8.0 41.0 44-45 32.034304587314125 37.0 31.0 40.0 7.5 41.0 46-47 31.71523122339213 37.0 30.0 40.0 3.5 41.0 48-49 31.47380820617937 37.0 30.0 39.0 2.0 40.0 50-51 30.74788377053045 35.5 29.0 38.5 2.0 39.5 52-53 31.2948675293389 36.5 30.5 39.0 2.0 40.0 54-55 31.7130189979976 37.0 31.0 39.5 2.0 40.5 56-57 31.540339558996486 36.5 31.0 39.5 2.0 41.0 58-59 31.185718165624227 36.0 30.5 39.0 2.0 40.5 60-61 30.70196010024817 35.5 29.5 39.0 2.0 40.0 62-63 30.200370756975474 35.0 29.0 39.0 2.0 40.0 64-65 29.632737796349684 35.0 28.0 38.0 2.0 40.0 66-67 29.11137236368811 34.0 27.5 37.5 2.0 40.0 68-69 28.57019833213234 34.0 26.5 37.0 2.0 39.0 70-71 28.02228953857123 34.0 26.0 36.0 2.0 39.0 72-73 27.445945145132647 33.5 25.5 36.0 2.0 38.5 74-75 26.82500885651809 33.0 24.5 35.0 2.0 37.5 76-77 26.215285467823854 32.5 22.5 35.0 2.0 37.0 78-79 25.617750078440793 32.0 20.0 35.0 2.0 36.0 80-81 25.002097234630014 31.5 18.0 34.5 2.0 36.0 82-83 24.33645145931454 31.0 11.5 34.0 2.0 35.0 84-85 23.678075180924687 31.0 6.0 34.0 2.0 35.0 86-87 23.023877953000916 30.0 2.0 34.0 2.0 35.0 88-89 22.326090215549165 29.5 2.0 34.0 2.0 35.0 90-91 21.537750501993205 29.0 2.0 34.0 2.0 35.0 92-93 20.6773644302542 29.0 2.0 33.5 2.0 35.0 94-95 19.72847485278303 27.0 2.0 33.0 2.0 34.0 96-97 18.805034923568293 25.5 2.0 33.0 2.0 34.0 98 18.177493167895246 25.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 202574.0 3 34274.0 4 25739.0 5 21702.0 6 20335.0 7 21571.0 8 24428.0 9 28119.0 10 31252.0 11 34050.0 12 37443.0 13 41996.0 14 36328.0 15 36895.0 16 40520.0 17 46423.0 18 51667.0 19 51416.0 20 53699.0 21 58166.0 22 63428.0 23 70163.0 24 77708.0 25 86807.0 26 97431.0 27 110759.0 28 126549.0 29 147172.0 30 172225.0 31 206949.0 32 252777.0 33 320332.0 34 423410.0 35 574552.0 36 739962.0 37 720183.0 38 282568.0 39 11469.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.78283799522381 16.752947516945923 12.811460619934486 24.65275386789578 2 16.238203183558362 18.51907126049352 38.838486461411335 26.40423909453678 3 20.80601629422312 22.089056722728515 27.10845288148799 29.996474101560374 4 13.781758664630583 14.263761034774502 34.31547225191924 37.63900804867568 5 15.666402280696111 35.29913317710582 32.363036201794095 16.67142834040397 6 35.53125325881047 32.591543645893495 16.58939703664571 15.287806058650316 7 31.98537843130914 29.6406605835767 18.907218196192474 19.466742788921685 8 28.38121841681288 33.26873549451813 18.460644029924097 19.88940205874489 9 26.996697585196266 16.62482988615726 18.85356507522167 37.5249074534248 10-11 27.026514081785535 24.746250282408617 25.732292979619015 22.49494265618683 12-13 27.163369403966005 21.734140022424544 26.455872230257526 24.64661834335192 14-15 24.029386575715918 23.420069307400702 24.16971813014753 28.380825986735854 16-17 24.547778580925986 26.45482876577755 24.610995149556654 24.386397503739808 18-19 24.472181552929055 25.907457031138915 25.94253061782857 23.67783079810346 20-21 25.024330236397212 24.96728002691409 25.953847988754685 24.05454174793401 22-23 24.7212039174679 24.63907011970764 25.87620928628854 24.763516676535925 24-25 24.628080722249553 24.83705541524042 25.995604123502066 24.539259739007964 26-27 24.654150831456597 24.906699230446442 26.106441243802024 24.332708694294936 28-29 24.42069790952508 25.35787210802143 25.90756359157303 24.313866390880463 30-31 24.685574191293938 25.106936837888906 25.699459762883027 24.508029207934136 32-33 24.551132602732192 25.1458935183585 25.736556927832975 24.566416951076334 34-35 24.827438242527453 25.06738552014125 25.833549653254085 24.271626584077215 36-37 24.794909155265774 25.002586032657735 25.85259884835346 24.34990596372303 38-39 24.67143015116828 25.17938718267512 25.836013198084846 24.313169468071752 40-41 24.805656759536074 25.175417206282003 25.742936732130918 24.275989302051006 42-43 24.6721830053545 25.11800851595911 25.60938854427593 24.600419934410457 44-45 24.722182157315515 25.10244557746445 25.64863839220074 24.526733873019296 46-47 24.901571513996178 25.18145024659162 25.585516240583505 24.331461998828697 48-49 24.848477381557736 25.198330917782414 25.481476793910574 24.47171490674928 50-51 24.53642931222631 25.437442064749323 25.598582575877092 24.427546047147274 52-53 24.720136852604956 25.46265808588153 25.365386683253504 24.45181837826001 54-55 24.554029525116615 25.18604615324986 25.618672747335776 24.641251574297748 56-57 24.693159465588206 25.32633343882654 25.503664722044068 24.47684237354118 58-59 24.889052705600058 25.199902070876156 25.481844983946512 24.429200239577273 60-61 24.75577238953795 25.175616482651936 25.708580255603053 24.360030872207062 62-63 24.53097689488098 25.358476361332592 25.653314357744982 24.45723238604144 64-65 24.60812462322369 25.343954285594762 25.54853401799861 24.499387073182938 66-67 24.669840644803116 25.26918789148574 25.473023863304366 24.587947600406775 68-69 24.542944630918694 25.298788508140767 25.541942048515132 24.61632481242541 70-71 24.661142983300365 25.144917839922172 25.542528610787475 24.65141056598999 72-73 24.770084996830285 25.12505556910931 25.53684307750007 24.568016356560328 74-75 24.475470204245042 25.520127038210898 25.458954826401698 24.545447931142363 76-77 24.71924913183107 25.142502475951368 25.42582818427497 24.7124202079426 78-79 24.687866236342995 25.101050096350797 25.574954035487803 24.636129631818406 80-81 24.727439314820767 25.237271499490955 25.432383476190946 24.602905709497332 82-83 24.78778737573269 25.14894536530241 25.466046726523473 24.597220532441426 84-85 24.72675383632167 25.272555959687608 25.4216400216836 24.579050182307125 86-87 24.732285732514068 25.239657528701258 25.51612087231087 24.511935866473802 88-89 24.673369787813282 25.07585560891141 25.36988297682768 24.880891626447628 90-91 24.713393371364095 25.02856784651329 25.42139089452014 24.836647887602478 92-93 24.868097044457798 25.22828308305593 25.440687814109904 24.462932058376367 94-95 24.949230587678862 25.018431286029397 25.422142451008884 24.61019567528286 96-97 24.726620255278185 25.01823215706614 25.581138929130127 24.67400865852555 98 24.783072328625646 25.24664609074994 25.185082510122548 24.785199070501868 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 782.0 1 608.0 2 817.0 3 1181.0 4 884.0 5 695.5 6 1172.5 7 2283.0 8 3261.5 9 3180.5 10 2474.5 11 2082.5 12 2217.5 13 2569.5 14 2998.5 15 3477.0 16 3871.5 17 4081.5 18 4150.0 19 4103.5 20 3976.0 21 3808.0 22 3793.0 23 4050.0 24 4578.5 25 5476.0 26 6809.5 27 8901.5 28 11852.5 29 16049.0 30 21448.0 31 27695.5 32 35586.0 33 44120.0 34 52913.0 35 63105.0 36 74508.5 37 86960.5 38 100399.0 39 113571.5 40 127026.5 41 141716.5 42 156772.0 43 172549.0 44 188122.5 45 204279.0 46 226806.5 47 248661.5 48 255026.0 49 249523.5 50 245746.0 51 245063.5 52 245681.5 53 246595.5 54 242953.5 55 233876.5 56 220137.0 57 204771.5 58 187724.0 59 168436.0 60 148030.5 61 125114.0 62 101189.5 63 77572.5 64 57285.0 65 42908.0 66 32406.5 67 24568.0 68 18522.5 69 13858.0 70 10314.5 71 7761.5 72 6045.0 73 4644.5 74 3561.0 75 2662.0 76 1801.0 77 1113.0 78 669.0 79 412.5 80 256.5 81 146.5 82 92.0 83 62.5 84 46.5 85 32.0 86 19.5 87 17.0 88 15.0 89 16.0 90 14.5 91 8.5 92 5.0 93 8.0 94 9.5 95 10.5 96 10.0 97 6.0 98 3.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.45286669746710084 2 0.04566192232234531 3 0.052981205233250124 4 0.05158794071975301 5 0.06093210139027364 6 0.06304986345078925 7 0.041296360180054364 8 0.01902270482428055 9 0.01144334587085627 10-11 0.014285605478390374 12-13 0.010142965658258965 14-15 0.014629277391719661 16-17 0.013923356704881125 18-19 0.05431873916620735 20-21 0.08258343193001874 22-23 0.0971662671712885 24-25 0.06839071075252817 26-27 0.08300141128406788 28-29 0.08319646831595746 30-31 0.055656273099164585 32-33 0.031933622649353774 34-35 0.38292481888954594 36-37 0.5978126490212503 38-39 0.5487047191355221 40-41 0.544385599143681 42-43 0.5186473593643444 44-45 0.5043338885956842 46-47 0.4944045568294947 48-49 0.4845773977942951 50-51 0.49871438839124577 52-53 0.5759848383097955 54-55 0.5473393199122949 56-57 0.5061451324632303 58-59 0.4849582234279843 60-61 0.4972468164370288 62-63 0.5087830466087848 64-65 0.5276757134118057 66-67 0.5520485539679152 68-69 0.5084765284158155 70-71 0.45810537203784996 72-73 0.4407081424793161 74-75 0.422883645136643 76-77 0.4362775613263953 78-79 0.4309738677450162 80-81 0.4280480122666723 82-83 0.44638337326429434 84-85 0.4143940200344007 86-87 0.4175149325446341 88-89 0.4429838078513613 90-91 0.42715632297803413 92-93 0.42272574182511335 94-95 0.43225567109743357 96-97 0.4273792453001937 98 0.4222334550303444 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 5383041.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.46640198547209 #Duplication Level Percentage of deduplicated Percentage of total 1 74.41659340950379 40.53204091031466 2 13.892062863385837 15.13301360649243 3 4.974266596226747 8.12791212038976 4 2.205144953490313 4.804252458921542 5 1.2281676545912426 3.344693659026053 6 0.7258421170476168 2.3720405115060945 7 0.4982852419483704 1.8997863003971711 8 0.34246325483820517 1.492219304261668 9 0.24157516375015023 1.1841956980669734 >10 1.3479985011030373 13.221863682561077 >50 0.09010569135616603 3.3573516986261778 >100 0.03584911380000455 3.1839441762671767 >500 9.598413519143064E-4 0.35316369403047665 >1k 6.170378460396591E-4 0.7042147641636687 >5k 6.855976066986117E-5 0.2893074149749955 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 9008 0.16734035650109297 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6487 0.12050809198741008 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.3003802125973032E-4 0.0 5 0.0 7.43074407198459E-5 0.0 1.3003802125973032E-4 0.0 6 0.0 7.43074407198459E-5 0.0 1.486148814396918E-4 1.8576860179961476E-5 7 0.0 7.43074407198459E-5 0.0 1.8576860179961475E-4 1.8576860179961476E-5 8 0.0 7.43074407198459E-5 0.0 1.8576860179961475E-4 1.8576860179961476E-5 9 0.0 7.43074407198459E-5 0.0 2.4149918233949919E-4 1.8576860179961476E-5 10-11 0.0 7.43074407198459E-5 0.0 2.4149918233949919E-4 1.8576860179961476E-5 12-13 0.0 1.1146116107976885E-4 0.0 2.4149918233949919E-4 1.2074959116974959E-4 14-15 0.0 1.1146116107976885E-4 0.0 2.4149918233949919E-4 1.3932645134971108E-4 16-17 0.0 1.1146116107976885E-4 0.0 2.507876124294799E-4 1.8576860179961475E-4 18-19 0.0 1.1146116107976885E-4 0.0 2.6007604251946064E-4 2.229223221595377E-4 20-21 0.0 1.486148814396918E-4 0.0 2.786529026994221E-4 2.229223221595377E-4 22-23 0.0 1.486148814396918E-4 0.0 3.343834832393066E-4 2.693644726094414E-4 24-25 0.0 1.5790331152967254E-4 0.0 3.8082563368921026E-4 2.972297628793836E-4 26-27 0.0 1.6719174161965327E-4 0.0 4.644215044990369E-4 3.158066230593451E-4 28-29 0.0 1.6719174161965327E-4 0.0 8.359587080982664E-4 3.158066230593451E-4 30-31 0.0 1.6719174161965327E-4 0.0 0.002303530662315223 3.158066230593451E-4 32-33 3.715372035992295E-5 1.6719174161965327E-4 0.0 0.0051457902698493286 3.3438348323930653E-4 34-35 3.715372035992295E-5 1.6719174161965327E-4 0.0 0.008368875511072644 3.715372035992295E-4 36-37 3.715372035992295E-5 1.8576860179961475E-4 0.0 0.01333818560921234 3.8082563368921026E-4 38-39 3.715372035992295E-5 2.0434546197957624E-4 0.0 0.02106615944407631 3.9011406377919097E-4 40-41 3.715372035992295E-5 2.229223221595377E-4 0.0 0.029899456459647995 3.9011406377919097E-4 42-43 3.715372035992295E-5 2.229223221595377E-4 0.0 0.03888136835665937 3.994024938691717E-4 44-45 3.715372035992295E-5 2.229223221595377E-4 9.288430089980738E-6 0.04782612653331082 4.2726778413911394E-4 46-47 3.715372035992295E-5 2.229223221595377E-4 1.8576860179961476E-5 0.05807126492255957 4.458446443190754E-4 48-49 3.715372035992295E-5 2.507876124294799E-4 1.8576860179961476E-5 0.06839071075252817 4.458446443190754E-4 50-51 3.715372035992295E-5 2.6007604251946064E-4 1.8576860179961476E-5 0.07896094419492625 4.8299836467899837E-4 52-53 3.715372035992295E-5 2.8794133278940286E-4 1.8576860179961476E-5 0.08906675613282529 5.480173753088634E-4 54-55 3.715372035992295E-5 4.179793540491332E-4 1.8576860179961476E-5 0.10037077555233184 5.758826655788057E-4 56-57 3.715372035992295E-5 4.458446443190754E-4 1.8576860179961476E-5 0.11195344787453784 5.758826655788057E-4 58-59 3.715372035992295E-5 5.29440515128902E-4 1.8576860179961476E-5 0.12434421361457214 5.758826655788057E-4 60-61 3.715372035992295E-5 5.573058053988442E-4 1.8576860179961476E-5 0.13665138348379663 5.758826655788057E-4 62-63 3.715372035992295E-5 5.758826655788057E-4 1.8576860179961476E-5 0.14868918888041166 5.758826655788057E-4 64-65 3.715372035992295E-5 6.03747955848748E-4 2.7865290269942216E-5 0.16059695625576695 5.758826655788057E-4 66-67 3.715372035992295E-5 6.316132461186902E-4 3.715372035992295E-5 0.17359146995165 5.758826655788057E-4 68-69 3.715372035992295E-5 6.501901062986517E-4 3.715372035992295E-5 0.1876262878176109 5.758826655788057E-4 70-71 3.715372035992295E-5 7.244975470184975E-4 3.715372035992295E-5 0.20157750981276196 5.944595257587672E-4 72-73 3.715372035992295E-5 7.802281275583819E-4 3.715372035992295E-5 0.21397756398288625 6.501901062986517E-4 74-75 3.715372035992295E-5 7.802281275583819E-4 3.715372035992295E-5 0.22678630907696967 7.152091169285169E-4 76-77 4.644215044990369E-5 7.802281275583819E-4 3.715372035992295E-5 0.24070966578185082 7.43074407198459E-4 78-79 5.5730580539884425E-5 7.895165576483627E-4 3.715372035992295E-5 0.25628636304274854 7.523628372884398E-4 80-81 5.5730580539884425E-5 8.359587080982664E-4 3.715372035992295E-5 0.27198380989481596 7.80228127558382E-4 82-83 5.5730580539884425E-5 8.359587080982664E-4 3.715372035992295E-5 0.28705893193085474 7.988049877383434E-4 84-85 5.5730580539884425E-5 8.359587080982664E-4 3.715372035992295E-5 0.3024127068695929 7.988049877383434E-4 86 5.5730580539884425E-5 8.359587080982664E-4 3.715372035992295E-5 0.3138003221599092 7.988049877383434E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 7625 0.0 39.48016 1 TACCTGG 7495 0.0 38.482693 2 ACCTGGG 9610 0.0 28.820131 3 GTACATG 15035 0.0 25.104494 1 TACATGG 15545 0.0 23.62807 2 ACATGGG 16240 0.0 21.34608 3 GTATAGG 1265 0.0 20.376919 1 CCTGGGG 10235 0.0 19.354156 4 GTATCAA 20405 0.0 18.836096 1 CCTATAC 1055 0.0 18.254892 3 AGTACAT 11085 0.0 17.870409 2 GAGTACA 12795 0.0 17.843597 1 CATGGGG 12860 0.0 17.756882 4 AGAGTAC 16060 0.0 17.034233 10-11 GTGTAGG 1770 0.0 16.643616 1 TCAACGC 22845 0.0 16.57934 4 TATCAAC 23050 0.0 16.511768 2 GTGTAGC 2705 0.0 16.506138 1 CAACGCA 22975 0.0 16.405695 5 GTACCGG 995 0.0 16.19146 1 >>END_MODULE