##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921459_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5383041 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.89552689641413 33.0 31.0 34.0 30.0 34.0 2 32.00276980985283 34.0 31.0 34.0 30.0 34.0 3 32.13218011900708 34.0 31.0 34.0 30.0 34.0 4 35.67951219394391 37.0 35.0 37.0 35.0 37.0 5 35.4748644864492 37.0 35.0 37.0 33.0 37.0 6 35.51378876735288 37.0 35.0 37.0 33.0 37.0 7 35.443591085410645 37.0 35.0 37.0 33.0 37.0 8 35.39672668292885 37.0 35.0 37.0 33.0 37.0 9 37.01227131652908 39.0 37.0 39.0 33.0 39.0 10-11 36.916238795134575 39.0 37.0 39.0 33.0 39.0 12-13 36.793788399531046 39.0 37.0 39.0 33.0 39.0 14-15 38.074485871461874 40.0 38.0 41.0 33.0 41.0 16-17 37.97812518983229 40.0 38.0 41.0 33.0 41.0 18-19 37.87427069569041 40.0 38.0 41.0 33.0 41.0 20-21 37.751400741699726 40.0 38.0 41.0 32.5 41.0 22-23 37.7113777324007 40.0 38.0 41.0 32.5 41.0 24-25 37.76153172528316 40.0 38.0 41.0 33.0 41.0 26-27 37.64516153601654 40.0 38.0 41.0 32.0 41.0 28-29 37.50987982443381 40.0 38.0 41.0 32.0 41.0 30-31 37.368281237315486 40.0 37.0 41.0 32.0 41.0 32-33 37.196472217098105 40.0 37.0 41.0 31.0 41.0 34-35 37.03988321842617 40.0 37.0 41.0 31.0 41.0 36-37 36.93566777589099 40.0 37.0 41.0 31.0 41.0 38-39 36.89564105121994 40.0 37.0 41.0 31.0 41.0 40-41 36.72869220204713 40.0 36.0 41.0 30.0 41.0 42-43 36.48051788942347 39.0 36.0 41.0 30.0 41.0 44-45 36.26263212559592 39.0 35.5 41.0 30.0 41.0 46-47 35.97588937182533 39.0 35.0 40.0 29.0 41.0 48-49 35.62195457920532 39.0 35.0 40.0 28.0 41.0 50-51 35.33134960331901 38.5 35.0 40.0 27.0 41.0 52-53 35.00671005478131 38.0 34.0 40.0 26.5 41.0 54-55 34.66287048528889 38.0 34.0 40.0 26.0 41.0 56-57 34.25866011423655 37.5 33.5 40.0 25.5 41.0 58-59 33.8471726297459 37.0 33.0 40.0 24.0 41.0 60-61 33.39587762753432 36.5 32.5 39.0 23.0 40.5 62-63 32.936542281583954 36.0 32.0 39.0 22.0 40.0 64-65 32.40092087353598 35.0 31.0 38.5 20.5 40.0 66-67 31.845162427705827 35.0 31.0 38.0 18.5 40.0 68-69 31.32017775825969 35.0 30.5 37.0 17.5 39.5 70-71 30.743168684763873 34.0 30.0 36.5 12.5 39.0 72-73 30.17139066932613 34.0 29.0 36.0 8.0 39.0 74-75 29.635025536680846 34.0 29.0 35.5 7.0 38.0 76-77 28.405674877824634 32.0 27.0 34.5 6.5 36.0 78-79 29.33267757016898 34.0 29.0 35.0 6.5 37.0 80-81 29.344161042057827 34.0 29.0 35.0 2.0 36.5 82-83 28.98338652817246 34.0 29.0 35.0 2.0 36.0 84-85 28.459386896737364 33.5 28.5 35.0 2.0 35.5 86-87 27.911662106976337 33.0 27.0 35.0 2.0 35.0 88-89 27.33574460978469 33.0 26.0 35.0 2.0 35.0 90-91 26.814929981027454 32.5 25.0 34.0 2.0 35.0 92-93 26.336204572842746 32.0 25.0 34.0 2.0 35.0 94-95 25.785194744011797 32.0 23.5 34.0 2.0 35.0 96-97 24.951684187432345 31.5 19.0 34.0 2.0 35.0 98-99 23.87126960392834 31.0 4.5 34.0 2.0 35.0 100-101 20.3023930153978 25.5 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 37567.0 3 19685.0 4 11499.0 5 8569.0 6 7669.0 7 7693.0 8 9148.0 9 10935.0 10 12864.0 11 15484.0 12 18160.0 13 21657.0 14 24178.0 15 27307.0 16 30794.0 17 36702.0 18 36929.0 19 34103.0 20 34281.0 21 35632.0 22 38844.0 23 42641.0 24 48381.0 25 56164.0 26 67035.0 27 80474.0 28 97400.0 29 118062.0 30 144385.0 31 178963.0 32 227838.0 33 303862.0 34 423817.0 35 625105.0 36 937464.0 37 1094456.0 38 443886.0 39 13408.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.0132092888748 17.213646878012803 13.200642930319278 24.572500902793124 2 16.323988615357006 18.83951840604595 38.41586939426989 26.420623584327146 3 20.800057814733133 22.263799784160806 27.292789822823483 29.643352578282578 4 14.065465221879684 14.574249667012262 34.227719375072255 37.1325657360358 5 15.717177083846135 35.24448659347967 32.42339098070505 16.614945341969136 6 35.657234587187055 32.68730711271374 16.44043294860125 15.215025351497957 7 32.05054726508741 29.611096662460962 18.907224731990965 19.43113134046066 8 28.435135264299966 33.2646283655687 18.43469454585824 19.865541824273098 9 26.83034036719577 16.66932243952043 18.852516473384043 37.64782071989976 10-11 27.023753929090113 24.781858739349772 25.72686714350489 22.467520188055232 12-13 27.15092029194154 21.698450974615167 26.528002213464518 24.622626519978777 14-15 23.937962478024815 23.403234133834978 24.22846478324091 28.430338604899298 16-17 24.48370397178666 26.453796754127957 24.73238722074355 24.330112053341832 18-19 24.426314536536704 25.893001001107407 26.047274124096063 23.63341033825983 20-21 24.98786134224474 24.931883222860556 26.057847091748553 24.02240834314615 22-23 24.65648028597566 24.641055292561482 26.002431759503907 24.700032661958947 24-25 24.586148625890697 24.830989531334684 26.08032762651128 24.502534216263342 26-27 24.563711588382837 24.91362304213003 26.224369571304585 24.298295798182547 28-29 24.37225753165539 25.353010200147345 26.030452721541273 24.24427954665599 30-31 24.59915678834243 25.083786599773 25.845526871670632 24.471529740213935 32-33 24.44724536948663 25.119894670851522 25.879497739582895 24.553362220078952 34-35 24.71556111666913 25.082260202522377 25.99982536369404 24.20235331711445 36-37 24.671487647066037 25.047571308657812 25.975132867101685 24.305808177174466 38-39 24.58912498522901 25.17023796340957 25.96765766683042 24.272979384531006 40-41 24.66766524949412 25.165504280456908 25.85818866563588 24.308641804413096 42-43 24.552852959464403 25.153399250099717 25.739965954831728 24.55378183560416 44-45 24.573094760607926 25.026494042927784 25.809118038207156 24.59129315825713 46-47 24.71895591945233 25.205242402784044 25.769569588801676 24.30623208896194 48-49 24.727354264921463 25.251476852351544 25.607297997863977 24.413870884863016 50-51 24.41416262986032 25.438925765028564 25.708160753649896 24.438750851461226 52-53 24.651805306722686 25.476266731662513 25.443338433426693 24.42858952818811 54-55 24.526476553817893 25.17988652082786 25.601188443716865 24.69244848163738 56-57 24.662660992363918 25.325272940204325 25.562005653495984 24.450060413935777 58-59 24.889726467394073 25.204737972178226 25.502890779044613 24.402644781383092 60-61 24.765833354775253 25.25685482638688 25.675738564158134 24.301573254679735 62-63 24.524641534940567 25.35879020202317 25.68676617640119 24.429802086635082 64-65 24.560195121425597 25.381781018984988 25.56181150368881 24.496212355900603 66-67 24.636801798608246 25.306810502300713 25.458100692067596 24.598287007023444 68-69 24.499993958978678 25.349184973284743 25.586085947933828 24.564735119802748 70-71 24.655556855053753 25.151058924336912 25.58468361672664 24.608700603882696 72-73 24.74191688937798 25.156789879819513 25.534544317971918 24.566748912830587 74-75 24.448040359160697 25.580195924589376 25.420786607015327 24.550977109234598 76-77 24.61464913625701 25.19113607778354 25.50006884010112 24.69414594585833 78-79 24.55686142554651 25.169246699745123 25.687620488815107 24.58627138589326 80-81 24.624438127550828 25.353689984477835 25.49039392998431 24.531477957987022 82-83 24.662424692666548 25.23195643537422 25.56901145269802 24.536607419261212 84-85 24.600885477066864 25.38249917016137 25.489233186373163 24.5273821663986 86-87 24.57207169717593 25.38784453281276 25.55391715748091 24.486166612530408 88-89 24.506796276218175 25.23268034669976 25.469643697905475 24.790879679176587 90-91 24.579206247182565 25.212330194669224 25.467504954084447 24.740958604063767 92-93 24.718344759191822 25.424414584471112 25.527387166220755 24.329853490116314 94-95 24.72591940696169 25.221146004806428 25.474444302938743 24.57849028529314 96-97 24.484006227334877 25.214817044170978 25.687226903870165 24.613949824623983 98-99 24.54212774068914 25.38403043520508 25.429771678367345 24.644070145738436 100-101 25.049063052908583 24.67963291816644 25.563654985880934 24.707649043044043 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 341.0 1 292.0 2 624.0 3 996.5 4 692.5 5 483.5 6 894.0 7 1961.5 8 2816.0 9 2623.5 10 1817.0 11 1215.5 12 1118.0 13 1170.0 14 1269.5 15 1398.5 16 1521.5 17 1673.0 18 1876.0 19 2043.5 20 2191.5 21 2411.0 22 2671.5 23 3092.5 24 3711.5 25 4508.0 26 5725.5 27 7459.5 28 9855.0 29 13406.5 30 18258.0 31 23843.0 32 30746.0 33 38727.0 34 46763.0 35 55225.5 36 65990.0 37 78060.0 38 89808.0 39 102402.5 40 116756.5 41 129602.5 42 142548.5 43 158230.5 44 174942.0 45 191381.0 46 205062.5 47 223447.5 48 249689.0 49 257286.0 50 246527.5 51 242469.5 52 242758.0 53 242586.0 54 240223.0 55 232550.0 56 218990.5 57 201702.0 58 184936.5 59 167586.0 60 147221.0 61 125149.0 62 102060.0 63 78439.0 64 57660.0 65 42674.5 66 32111.5 67 24529.0 68 18535.5 69 13965.5 70 10662.0 71 8025.5 72 6002.5 73 4605.5 74 3545.0 75 2630.5 76 1814.0 77 1153.5 78 679.0 79 360.0 80 188.5 81 107.5 82 58.5 83 33.5 84 21.0 85 6.5 86 4.0 87 3.0 88 2.0 89 1.0 90 0.5 91 1.0 92 1.5 93 1.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3039731631247096 2 0.0 3 0.006130363859387287 4 0.05504323671322585 5 4.829983646789983E-4 6 0.06093210139027364 7 0.07129798937069214 8 0.10139250286222974 9 0.08954046606741431 10-11 0.09374812489817559 12-13 0.09374812489817559 14-15 0.06304057502069926 16-17 0.03526816905165686 18-19 0.037153720359922954 20-21 0.027382291905263215 22-23 0.04019103699934665 24-25 0.03328044501240098 26-27 0.020583161079397314 28-29 0.023332536386031614 30-31 0.00314877780050347 32-33 0.005489462183178616 34-35 0.007913742436663589 36-37 0.011053231807077077 38-39 0.01614329149638652 40-41 0.020072297424448375 42-43 0.003566757154552603 44-45 0.01298522526579307 46-47 0.02292384546207246 48-49 0.0026007604251946067 50-51 0.007105649018835264 52-53 0.0024707224039348763 54-55 0.003771102616532179 56-57 0.003288104251853181 58-59 0.001170342191337573 60-61 0.0052479630008391166 62-63 0.014619988961629683 64-65 0.0063439977514568435 66-67 0.036995817048393276 68-69 0.058628570727958414 70-71 0.011545518601846057 72-73 0.03037316639423701 74-75 0.04741743560935167 76-77 0.2884986385948017 78-79 0.07265410016382932 80-81 0.031654969746654354 82-83 0.026509179476805027 84-85 0.01802884280465261 86-87 0.11473997690153205 88-89 0.5121919004518078 90-91 0.12857973773560336 92-93 0.04611705539675436 94-95 0.00844318295179249 96-97 0.005963172117767633 98-99 0.01096034750617727 100-101 0.00792303086675357 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 5383041.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.371213827538924 #Duplication Level Percentage of deduplicated Percentage of total 1 69.52117003477602 34.32344551327618 2 16.276076395199716 16.07139295961528 3 5.994117706891332 8.878106010431077 4 2.7150136002029988 5.361740680011941 5 1.4225745916321688 3.511711717454783 6 0.9237935861185469 2.7365286403660667 7 0.6001753995789384 2.074197159064827 8 0.4261864101455742 1.6833072308550678 9 0.30923589481256053 1.3740616337347134 >10 1.6455535902822438 14.727604462065678 >50 0.11536054152326335 3.8810167733909795 >100 0.04889325338708817 3.9881318597755273 >500 0.001094304827777775 0.3851761037878367 >1k 6.792215596065947E-4 0.7142367878223232 >5k 7.546906217639436E-5 0.28934246834772276 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 9246 0.1717616492239238 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6285 0.11675556623105789 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.8576860179961476E-5 0.0 3 0.0 0.0 0.0 1.8576860179961476E-5 0.0 4 0.0 0.0 0.0 1.8576860179961476E-5 0.0 5 0.0 9.288430089980738E-5 0.0 1.8576860179961476E-5 0.0 6 0.0 9.288430089980738E-5 0.0 3.715372035992295E-5 0.0 7 0.0 9.288430089980738E-5 0.0 3.715372035992295E-5 0.0 8 0.0 1.1146116107976885E-4 0.0 3.715372035992295E-5 0.0 9 0.0 1.1146116107976885E-4 0.0 7.43074407198459E-5 0.0 10-11 0.0 1.1146116107976885E-4 0.0 1.021727309897881E-4 0.0 12-13 0.0 1.3932645134971108E-4 0.0 1.3003802125973032E-4 9.288430089980738E-5 14-15 0.0 1.486148814396918E-4 0.0 1.486148814396918E-4 9.288430089980738E-5 16-17 0.0 1.5790331152967254E-4 0.0 1.5790331152967254E-4 9.288430089980738E-5 18-19 0.0 1.6719174161965327E-4 0.0 1.6719174161965327E-4 1.486148814396918E-4 20-21 0.0 1.6719174161965327E-4 0.0 1.6719174161965327E-4 1.76480171709634E-4 22-23 0.0 1.6719174161965327E-4 0.0 2.229223221595377E-4 2.0434546197957624E-4 24-25 1.8576860179961476E-5 1.76480171709634E-4 9.288430089980738E-6 2.693644726094414E-4 2.0434546197957624E-4 26-27 1.8576860179961476E-5 1.8576860179961475E-4 1.8576860179961476E-5 3.52960343419268E-4 2.1363389206955697E-4 28-29 1.8576860179961476E-5 1.8576860179961475E-4 1.8576860179961476E-5 7.523628372884397E-4 2.229223221595377E-4 30-31 1.8576860179961476E-5 1.8576860179961475E-4 1.8576860179961476E-5 0.002238511651685358 2.3221075224951843E-4 32-33 1.8576860179961476E-5 1.8576860179961475E-4 1.8576860179961476E-5 0.005117924979579387 2.6007604251946064E-4 34-35 1.8576860179961476E-5 1.950570318895955E-4 1.8576860179961476E-5 0.008220260629632953 3.3438348323930653E-4 36-37 2.7865290269942216E-5 2.0434546197957624E-4 1.8576860179961476E-5 0.013161705437502705 3.52960343419268E-4 38-39 3.715372035992295E-5 2.0434546197957624E-4 1.8576860179961476E-5 0.020796794971466873 4.086909239591525E-4 40-41 3.715372035992295E-5 2.0434546197957624E-4 1.8576860179961476E-5 0.02961151512685859 4.086909239591525E-4 42-43 3.715372035992295E-5 2.0434546197957624E-4 1.8576860179961476E-5 0.03861200388404992 4.086909239591525E-4 44-45 3.715372035992295E-5 2.0434546197957624E-4 1.8576860179961476E-5 0.04741743560935167 4.179793540491332E-4 46-47 3.715372035992295E-5 2.1363389206955697E-4 1.8576860179961476E-5 0.05742107481626092 4.365562142290947E-4 48-49 3.715372035992295E-5 2.229223221595377E-4 1.8576860179961476E-5 0.06769407849577962 4.458446443190754E-4 50-51 3.715372035992295E-5 2.229223221595377E-4 1.8576860179961476E-5 0.07815285077709792 4.458446443190754E-4 52-53 3.715372035992295E-5 2.3221075224951843E-4 1.8576860179961476E-5 0.08807289411319735 4.458446443190754E-4 54-55 3.715372035992295E-5 3.158066230593451E-4 1.8576860179961476E-5 0.09911683749018446 4.458446443190754E-4 56-57 3.715372035992295E-5 3.715372035992295E-4 1.8576860179961476E-5 0.11040228004951105 4.458446443190754E-4 58-59 3.715372035992295E-5 4.086909239591525E-4 1.8576860179961476E-5 0.122486527596576 4.6442150449903686E-4 60-61 3.715372035992295E-5 4.458446443190754E-4 1.8576860179961476E-5 0.13445002555247118 4.737099345890176E-4 62-63 3.715372035992295E-5 4.458446443190754E-4 1.8576860179961476E-5 0.14603269787467715 5.201520850389213E-4 64-65 4.644215044990369E-5 4.737099345890176E-4 1.8576860179961476E-5 0.1574296015950835 5.387289452188828E-4 66-67 5.5730580539884425E-5 5.387289452188828E-4 1.8576860179961476E-5 0.16999684750682748 5.387289452188828E-4 68-69 5.5730580539884425E-5 5.387289452188828E-4 1.8576860179961476E-5 0.18344649427711957 5.387289452188828E-4 70-71 6.501901062986516E-5 5.573058053988443E-4 1.8576860179961476E-5 0.19677539145624193 5.387289452188828E-4 72-73 7.43074407198459E-5 5.944595257587672E-4 1.8576860179961476E-5 0.20871102412186715 6.130363859387286E-4 74-75 7.43074407198459E-5 6.130363859387286E-4 1.8576860179961476E-5 0.2210925014318115 6.501901062986517E-4 76-77 7.43074407198459E-5 6.130363859387286E-4 1.8576860179961476E-5 0.23471862837381324 6.501901062986517E-4 78-79 7.43074407198459E-5 6.130363859387286E-4 1.8576860179961476E-5 0.24974730825940208 6.594785363886323E-4 80-81 7.43074407198459E-5 6.316132461186902E-4 1.8576860179961476E-5 0.26505464104769033 6.687669664786131E-4 82-83 7.43074407198459E-5 6.316132461186902E-4 1.8576860179961476E-5 0.2794052655367105 7.059206868385361E-4 84-85 7.43074407198459E-5 6.316132461186902E-4 1.8576860179961476E-5 0.2943317726913096 7.059206868385361E-4 86-87 8.359587080982665E-5 6.316132461186902E-4 1.8576860179961476E-5 0.30971341292031773 7.337859771084784E-4 88-89 9.288430089980738E-5 6.316132461186902E-4 1.8576860179961476E-5 0.3273242763709212 7.616512673784205E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 8100 0.0 40.04265 1 TACCTGG 8445 0.0 36.89602 2 ACCTGGG 10220 0.0 29.233383 3 GTACATG 15710 0.0 23.010511 1 TACATGG 16165 0.0 21.743593 2 CCTGGGG 10950 0.0 20.691101 4 ACATGGG 16705 0.0 20.443808 3 GAGTACA 12965 0.0 19.83727 1 GTATACG 385 0.0 19.793379 1 AGTACAT 12140 0.0 18.740974 2 GTATCAA 21205 0.0 18.687265 1 TATAACG 445 0.0 18.145302 2 CATGGGG 12935 0.0 18.103386 4 GTATAGG 1330 0.0 17.905195 1 GTATATA 1575 0.0 17.539133 1 AGAGTAC 16570 0.0 17.105482 10-11 TAACGCA 515 0.0 16.601397 4 TCAACGC 23575 0.0 16.561493 4 CAACGCA 23775 0.0 16.413776 5 CGTATAC 325 1.91656E-7 16.076397 3 >>END_MODULE