##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921458_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2459273 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.072155876960387 31.0 31.0 34.0 26.0 34.0 2 30.156680856497022 31.0 31.0 34.0 26.0 34.0 3 30.28748983947695 31.0 31.0 34.0 26.0 34.0 4 33.778944021261566 37.0 35.0 37.0 30.0 37.0 5 33.75339500738633 37.0 35.0 37.0 28.0 37.0 6 33.851728945912065 37.0 35.0 37.0 30.0 37.0 7 33.72803060091336 37.0 35.0 37.0 29.0 37.0 8 33.70110191101191 37.0 35.0 37.0 29.0 37.0 9 35.11981955642989 39.0 35.0 39.0 29.0 39.0 10-11 34.977524455398 39.0 35.0 39.0 28.0 39.0 12-13 34.80346447913672 38.5 35.0 39.0 27.0 39.0 14-15 35.77089225149058 39.5 36.0 41.0 27.0 41.0 16-17 35.61100922915024 39.0 36.0 41.0 27.0 41.0 18-19 35.423735388466426 39.0 36.0 40.5 27.0 41.0 20-21 35.29403831945457 39.0 35.5 40.0 26.0 41.0 22-23 35.33021628749634 39.0 36.0 41.0 25.5 41.0 24-25 35.182715583019856 39.0 35.0 41.0 25.0 41.0 26-27 34.89270142029779 39.0 35.0 40.0 24.0 41.0 28-29 34.64153064747184 39.0 34.0 40.0 23.5 41.0 30-31 34.377526407194324 38.0 34.0 40.0 21.5 41.0 32-33 34.08382761897521 38.0 34.0 40.0 18.5 41.0 34-35 33.64684725933233 38.0 33.0 40.0 16.5 41.0 36-37 33.24782486531589 38.0 33.0 40.0 13.5 41.0 38-39 33.00044403366361 38.0 32.0 40.0 9.0 41.0 40-41 32.70848824022384 38.0 31.5 40.0 9.0 41.0 42-43 32.40380246520008 37.5 31.0 40.0 8.0 41.0 44-45 32.068635324341784 37.0 31.0 40.0 7.5 41.0 46-47 31.754825104817563 37.0 30.0 40.0 3.5 41.0 48-49 31.521372779679197 37.0 30.0 40.0 2.0 41.0 50-51 30.7903223838915 36.0 29.0 38.5 2.0 39.5 52-53 31.328838847903427 36.5 30.5 39.0 2.0 40.0 54-55 31.74732207445046 37.0 31.0 39.5 2.0 40.5 56-57 31.580822259261172 36.5 31.0 40.0 2.0 41.0 58-59 31.228743819819925 36.0 30.5 39.0 2.0 41.0 60-61 30.75035122168218 35.5 29.5 39.0 2.0 40.0 62-63 30.249371663902302 35.0 29.0 39.0 2.0 40.0 64-65 29.68561034094222 35.0 28.0 38.0 2.0 40.0 66-67 29.178585094050153 34.0 28.0 37.5 2.0 40.0 68-69 28.637412153917033 34.0 26.5 37.0 2.0 39.0 70-71 28.09788075581686 34.0 26.0 36.0 2.0 39.0 72-73 27.520100655762903 33.5 25.5 36.0 2.0 39.0 74-75 26.907285201764914 33.0 24.5 35.0 2.0 37.5 76-77 26.300099460287655 32.5 22.5 35.0 2.0 37.0 78-79 25.712435341663976 32.0 20.5 35.0 2.0 36.5 80-81 25.106849666547795 31.5 18.5 34.5 2.0 36.0 82-83 24.45118801369348 31.0 13.5 34.0 2.0 35.5 84-85 23.803982518410926 31.0 7.0 34.0 2.0 35.0 86-87 23.155848496689877 30.0 2.0 34.0 2.0 35.0 88-89 22.461859256780357 30.0 2.0 34.0 2.0 35.0 90-91 21.690621171378694 29.0 2.0 34.0 2.0 35.0 92-93 20.84420456777267 29.0 2.0 34.0 2.0 35.0 94-95 19.910612811184443 27.0 2.0 33.0 2.0 34.5 96-97 18.996389176801436 25.5 2.0 33.0 2.0 34.0 98 18.372336052158502 25.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 91747.0 3 15658.0 4 12046.0 5 9889.0 6 9300.0 7 9884.0 8 11231.0 9 12938.0 10 14641.0 11 15826.0 12 17454.0 13 19456.0 14 16664.0 15 16747.0 16 18637.0 17 20898.0 18 23285.0 19 23256.0 20 24462.0 21 26269.0 22 28411.0 23 31557.0 24 35228.0 25 38868.0 26 44018.0 27 49651.0 28 56912.0 29 65664.0 30 77449.0 31 92334.0 32 114033.0 33 144100.0 34 190503.0 35 257458.0 36 337494.0 37 338344.0 38 140773.0 39 6187.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.73642524139531 16.577881342499463 12.775813243611134 24.909880172494088 2 16.263181019332162 18.498869035995575 38.74336880817549 26.494581136496777 3 20.623566861359247 22.370714417069586 26.907447520070043 30.098271201501127 4 13.873314702624018 14.342730463488055 34.036995885594045 37.74695894829389 5 15.772354547892153 35.178514537378256 32.28967420339106 16.759456711338533 6 35.62825912881574 32.40212848372796 16.665296828920557 15.304315558535745 7 31.98867648829573 29.60201737172165 18.980835131361847 19.428471008620775 8 28.464285583559768 33.330242390892785 18.526864966892344 19.678607058655107 9 27.14156392056199 16.73368648875507 18.582709699248547 37.54203989143439 10-11 26.988997814284765 24.737786357875336 25.70426738074696 22.568948447092943 12-13 27.06117622897903 21.768257657322433 26.424291963916264 24.74627414978228 14-15 24.00598232550195 23.314436071267348 23.94441032815353 28.73517127507717 16-17 24.59400408105583 26.464274494214436 24.43523535206986 24.506486072659875 18-19 24.640340711330104 25.72182578212075 25.9288507156366 23.708982790912547 20-21 25.018832433866717 24.956952983419725 25.775283788804888 24.24893079390867 22-23 24.730089488850577 24.71671836360221 25.718453760634063 24.83473838691315 24-25 24.519368296923723 24.954375236770648 25.891997182556427 24.634259283749202 26-27 24.656801420165735 24.98357872323454 25.90827770719093 24.451342149408795 28-29 24.59105361421573 25.315453449389786 25.695733348255846 24.397759588138637 30-31 24.76954388862839 25.107739439907483 25.65214782146123 24.4705688500029 32-33 24.501839134787044 25.16684001134028 25.661655331131715 24.669665522740964 34-35 24.71466506644786 25.15217386867184 25.737968252801913 24.39519281207839 36-37 24.726330117249397 25.227112148091237 25.562630585649664 24.483927149009705 38-39 24.75613580909753 25.095245552992594 25.708284655907676 24.440333982002198 40-41 24.7884115049187 25.118566836777045 25.644128984035845 24.44889267426841 42-43 24.690216216061543 25.015502985525508 25.62088588371923 24.673394914693723 44-45 24.78168232335948 25.06946192856886 25.5263697835093 24.62248596456236 46-47 24.934733317966852 25.175733708667842 25.460790131448814 24.428742841916495 48-49 24.80519215170269 25.215444056465568 25.352848511843344 24.626515279988396 50-51 24.61896668731268 25.37938830730172 25.364470867158968 24.637174138226637 52-53 24.687370195614378 25.51635941736378 25.27942646887691 24.516843918144932 54-55 24.657564774212332 25.088690907485038 25.442820738870086 24.810923579432544 56-57 24.677333818358687 25.267477517337785 25.46336100089614 24.591827663407393 58-59 24.829335479524854 25.25681662015291 25.410874922434505 24.50297297788773 60-61 24.876282716853403 25.048404891514803 25.462597502011292 24.6127148896205 62-63 24.635263654301863 25.203967664373277 25.564110765155917 24.596657916168937 64-65 24.670198207111255 25.160293983878105 25.513413959839376 24.656093849171267 66-67 24.648700128626448 25.312258033121466 25.38518929106605 24.653852547186034 68-69 24.700438640681895 25.24772274916918 25.416941630317645 24.634896979831275 70-71 24.709298644040516 25.054324579712205 25.512166704047367 24.72421007219991 72-73 24.787735564864494 25.101192332522327 25.391672890666534 24.719399211946648 74-75 24.501660400305227 25.336546796171692 25.390494746813204 24.771298056709874 76-77 24.724280548065163 25.120694908594537 25.417183687439802 24.73784085590049 78-79 24.73755877690934 25.01412116140273 25.49140212207463 24.7569179396133 80-81 24.672943189673042 25.20311573109309 25.309362610614272 24.814578468619597 82-83 24.768963082499283 25.20635390074384 25.26203110693271 24.762651909824168 84-85 24.809503352986 25.141228864672655 25.27502570581764 24.77424207652371 86-87 24.713619176137147 25.13970655345173 25.444244277845396 24.702429992565726 88-89 24.73321132261134 24.931524699001756 25.36101306070248 24.974250917684426 90-91 24.772967303861147 24.981417543309377 25.27009907104053 24.97551608178895 92-93 24.76018137983688 25.19341594540881 25.38253875006202 24.663863924692286 94-95 24.847354986982364 24.941701949775965 25.39287239328225 24.818070669959415 96-97 24.77646404893358 25.04182588547028 25.371001168653933 24.810708896942202 98 24.90677702731124 25.08732187990439 25.175450310552666 24.830450782231708 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 312.0 1 232.5 2 304.0 3 434.5 4 325.5 5 284.0 6 430.5 7 791.0 8 1165.5 9 1181.0 10 987.5 11 908.0 12 981.0 13 1131.5 14 1356.0 15 1524.5 16 1661.5 17 1741.0 18 1770.5 19 1826.5 20 1728.0 21 1613.0 22 1742.0 23 1901.0 24 2144.0 25 2565.5 26 3232.5 27 4172.5 28 5527.0 29 7342.0 30 9480.0 31 12416.5 32 15819.5 33 19376.0 34 23704.0 35 28998.5 36 34257.0 37 39836.0 38 46040.5 39 51941.0 40 57521.0 41 63688.0 42 71171.5 43 79455.5 44 87163.5 45 93563.0 46 100519.5 47 108606.5 48 113235.0 49 112786.5 50 111786.0 51 110891.0 52 110740.5 53 112293.0 54 112079.5 55 107898.0 56 101018.5 57 94710.0 58 87693.5 59 79555.0 60 70160.5 61 58720.0 62 47352.0 63 36212.0 64 26849.0 65 20293.0 66 15499.5 67 11733.5 68 8938.5 69 6860.0 70 5131.5 71 3846.0 72 2886.5 73 2142.0 74 1626.0 75 1209.0 76 813.5 77 517.0 78 325.0 79 192.0 80 111.5 81 71.5 82 40.5 83 31.5 84 21.5 85 10.0 86 8.5 87 7.5 88 7.0 89 6.0 90 5.0 91 6.5 92 6.5 93 5.0 94 3.5 95 3.5 96 2.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.46440553773411897 2 0.04851027112484055 3 0.056154806725402184 4 0.053837048591189346 5 0.06400265444300002 6 0.06347404293870587 7 0.04167898399242378 8 0.01935531354184753 9 0.01215806459876557 10-11 0.014333504251053054 12-13 0.010999185531659152 14-15 0.014760459696829103 16-17 0.014252179404238568 18-19 0.05515857735192474 20-21 0.08441519099343586 22-23 0.101107115802109 24-25 0.07018334280090092 26-27 0.08518777703817347 28-29 0.0868346051861668 30-31 0.05593116339666235 32-33 0.03171669025764931 34-35 0.3906845640967879 36-37 0.6097737014150116 38-39 0.5591896466964018 40-41 0.5532529328789443 42-43 0.5273916315919379 44-45 0.5127124967419233 46-47 0.50376676359233 48-49 0.4927472468489671 50-51 0.5071620759468347 52-53 0.5891375215358361 54-55 0.5571158631026324 56-57 0.5150099236644325 58-59 0.4939467883394808 60-61 0.5068367765595767 62-63 0.5182629175370119 64-65 0.5375775686554523 66-67 0.5619343602763907 68-69 0.517937618149754 70-71 0.4670485952555897 72-73 0.4508852819512108 74-75 0.43169261810299225 76-77 0.4452941987327149 78-79 0.4399674212663661 80-81 0.4363281343714179 82-83 0.45678133334526094 84-85 0.4233364900928039 86-87 0.42612186609619995 88-89 0.45247111646409327 90-91 0.43618581588949257 92-93 0.4310013569050691 94-95 0.4417362366845812 96-97 0.43628747194801065 98 0.42996446510818437 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2459273.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.07528444583512 #Duplication Level Percentage of deduplicated Percentage of total 1 80.64573226772978 51.6739823439745 2 11.506172860591388 14.745225978506832 3 3.3893340561334675 6.515176311861243 4 1.4741388603813543 3.7782346716637805 5 0.8023879017991122 2.570661652183747 6 0.4928851957146067 1.8949055468732725 7 0.34021384329012677 1.5259509146857952 8 0.2291068184326167 1.1744067647640175 9 0.18222357792982133 1.0508424829731997 >10 0.8695407929896488 9.742158408241583 >50 0.04628437436580939 2.027196271441728 >100 0.020449027860682253 2.3920579259255956 >500 0.0010840494703466869 0.4496563904197044 >1k 4.4637331131540224E-4 0.4595443364848816 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2493 0.10137142155425607 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 4.066242340724271E-5 0.0 0.0 0.0 0.0 12-13 4.066242340724271E-5 0.0 0.0 0.0 4.066242340724271E-5 14-15 4.066242340724271E-5 0.0 0.0 0.0 8.132484681448542E-5 16-17 4.066242340724271E-5 0.0 0.0 2.0331211703621355E-5 8.132484681448542E-5 18-19 4.066242340724271E-5 2.0331211703621355E-5 0.0 4.066242340724271E-5 8.132484681448542E-5 20-21 4.066242340724271E-5 4.066242340724271E-5 0.0 4.066242340724271E-5 8.132484681448542E-5 22-23 4.066242340724271E-5 4.066242340724271E-5 0.0 8.132484681448542E-5 1.4231848192534948E-4 24-25 4.066242340724271E-5 4.066242340724271E-5 0.0 8.132484681448542E-5 1.6264969362897084E-4 26-27 4.066242340724271E-5 4.066242340724271E-5 0.0 1.4231848192534948E-4 1.6264969362897084E-4 28-29 4.066242340724271E-5 4.066242340724271E-5 0.0 3.8629302236880576E-4 1.6264969362897084E-4 30-31 4.066242340724271E-5 4.066242340724271E-5 0.0 0.0017281529948078153 1.6264969362897084E-4 32-33 4.066242340724271E-5 4.066242340724271E-5 0.0 0.004127235975835135 2.0331211703621355E-4 34-35 4.066242340724271E-5 4.066242340724271E-5 0.0 0.007624204388858008 2.0331211703621355E-4 36-37 4.066242340724271E-5 4.066242340724271E-5 0.0 0.01213773338706195 2.0331211703621355E-4 38-39 4.066242340724271E-5 4.066242340724271E-5 0.0 0.020473530185546707 2.0331211703621355E-4 40-41 4.066242340724271E-5 8.132484681448542E-5 0.0 0.029154957582993024 2.0331211703621355E-4 42-43 4.066242340724271E-5 8.132484681448542E-5 0.0 0.03757207922829226 2.0331211703621355E-4 44-45 4.066242340724271E-5 8.132484681448542E-5 0.0 0.046273837837442204 2.236433287398349E-4 46-47 4.066242340724271E-5 8.132484681448542E-5 0.0 0.0549349340231849 2.4397454044345626E-4 48-49 4.066242340724271E-5 8.132484681448542E-5 0.0 0.06371801747914932 2.4397454044345626E-4 50-51 4.066242340724271E-5 8.132484681448542E-5 0.0 0.07313136849792601 2.6430575214707764E-4 52-53 4.066242340724271E-5 8.132484681448542E-5 0.0 0.08374426100721635 2.8463696385069896E-4 54-55 4.066242340724271E-5 8.132484681448542E-5 0.0 0.09372688595369444 2.8463696385069896E-4 56-57 4.066242340724271E-5 8.132484681448542E-5 0.0 0.10501070844920429 2.8463696385069896E-4 58-59 4.066242340724271E-5 8.132484681448542E-5 0.0 0.11686380487241554 2.8463696385069896E-4 60-61 4.066242340724271E-5 8.132484681448542E-5 0.0 0.12934716885843905 2.8463696385069896E-4 62-63 4.066242340724271E-5 8.132484681448542E-5 0.0 0.1400413862145439 2.8463696385069896E-4 64-65 4.066242340724271E-5 8.132484681448542E-5 0.0 0.1507965972057596 3.049681755543203E-4 66-67 4.066242340724271E-5 8.132484681448542E-5 0.0 0.1634832733088193 3.252993872579417E-4 68-69 4.066242340724271E-5 8.132484681448542E-5 0.0 0.17623094304698989 3.659618106651844E-4 70-71 4.066242340724271E-5 8.132484681448542E-5 0.0 0.1889582815734569 3.659618106651844E-4 72-73 4.066242340724271E-5 8.132484681448542E-5 0.0 0.20101469011370432 4.472866574796698E-4 74-75 4.066242340724271E-5 8.132484681448542E-5 0.0 0.21382335348698578 4.472866574796698E-4 76-77 4.066242340724271E-5 8.132484681448542E-5 0.0 0.22705897230604327 4.472866574796698E-4 78-79 4.066242340724271E-5 8.132484681448542E-5 0.0 0.24112817080494925 4.6761786918329113E-4 80-81 4.066242340724271E-5 8.132484681448542E-5 0.0 0.25523803172726245 4.879490808869125E-4 82-83 4.066242340724271E-5 8.132484681448542E-5 0.0 0.26967319203683365 4.879490808869125E-4 84-85 4.066242340724271E-5 8.132484681448542E-5 0.0 0.2850232568730678 4.879490808869125E-4 86 4.066242340724271E-5 8.132484681448542E-5 0.0 0.29691701571968626 4.879490808869125E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 3880 0.0 43.073147 1 TACCTGG 3780 0.0 43.05437 2 ACCTGGG 4765 0.0 32.999847 3 TATAACG 210 1.8189894E-12 28.3795 2 GTATCAA 6080 0.0 26.881685 1 GTACATG 7040 0.0 23.346794 1 TAACGCA 260 4.0017767E-11 22.921906 4 TCGCGTA 140 2.3558727E-5 22.905592 9 TATCAAC 7240 0.0 22.415342 2 TACATGG 7300 0.0 22.293907 2 TCAACGC 7145 0.0 22.007595 4 CAACGCA 7225 0.0 21.954268 5 AACGCAG 7650 0.0 21.2683 6 ATCAACG 7440 0.0 21.258219 3 ACATGGG 7295 0.0 21.05233 3 CCTGGGG 5360 0.0 20.954725 4 ATAACGC 285 1.3460522E-10 20.911211 3 GTGTAGC 1205 0.0 19.485645 1 GTATAGG 540 0.0 18.75688 1 GAGTACA 5515 0.0 18.69968 1 >>END_MODULE