##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921458_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2459273 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.880607399015886 33.0 31.0 34.0 30.0 34.0 2 31.992431096506976 34.0 31.0 34.0 30.0 34.0 3 32.11887903457648 34.0 31.0 34.0 30.0 34.0 4 35.66989268779839 37.0 35.0 37.0 35.0 37.0 5 35.466036507536984 37.0 35.0 37.0 33.0 37.0 6 35.504402317270184 37.0 35.0 37.0 33.0 37.0 7 35.43441578059858 37.0 35.0 37.0 33.0 37.0 8 35.38604864120413 37.0 35.0 37.0 33.0 37.0 9 36.99610250671642 39.0 37.0 39.0 33.0 39.0 10-11 36.896507829752935 39.0 37.0 39.0 33.0 39.0 12-13 36.77312665165681 39.0 37.0 39.0 33.0 39.0 14-15 38.05089512225767 40.0 38.0 41.0 33.0 41.0 16-17 37.95433589520155 40.0 38.0 41.0 33.0 41.0 18-19 37.84528740810801 40.0 38.0 41.0 33.0 41.0 20-21 37.72055623755476 40.0 38.0 41.0 32.0 41.0 22-23 37.68035573927742 40.0 38.0 41.0 32.5 41.0 24-25 37.73401285664504 40.0 38.0 41.0 32.5 41.0 26-27 37.61372242935209 40.0 38.0 41.0 32.0 41.0 28-29 37.47014239574053 40.0 38.0 41.0 32.0 41.0 30-31 37.32585991876461 40.0 37.0 41.0 32.0 41.0 32-33 37.15317331585391 40.0 37.0 41.0 31.0 41.0 34-35 36.99674619287896 40.0 37.0 41.0 31.0 41.0 36-37 36.88740696945805 40.0 37.0 41.0 30.5 41.0 38-39 36.84680675955862 40.0 37.0 41.0 30.5 41.0 40-41 36.672700224822535 40.0 36.0 41.0 30.0 41.0 42-43 36.42261290226827 39.0 36.0 41.0 30.0 41.0 44-45 36.203144994476006 39.0 35.0 40.5 30.0 41.0 46-47 35.91078867616568 39.0 35.0 40.0 29.0 41.0 48-49 35.554343499074726 39.0 35.0 40.0 28.0 41.0 50-51 35.26031778497141 38.0 34.5 40.0 27.0 41.0 52-53 34.925418202859134 38.0 34.0 40.0 26.0 41.0 54-55 34.581124381067085 38.0 34.0 40.0 26.0 41.0 56-57 34.17535426119833 37.5 33.0 40.0 24.5 41.0 58-59 33.76371452051073 37.0 33.0 40.0 23.5 41.0 60-61 33.311003089124306 36.0 32.5 39.0 22.5 40.5 62-63 32.84663719725301 36.0 32.0 39.0 21.5 40.0 64-65 32.30423665855723 35.0 31.0 38.5 20.0 40.0 66-67 31.751066270397796 35.0 31.0 38.0 18.0 40.0 68-69 31.221958684538073 35.0 30.0 37.0 15.5 39.5 70-71 30.64358613297507 34.0 29.5 36.5 11.5 39.0 72-73 30.06886161072805 34.0 29.0 36.0 8.0 39.0 74-75 29.52974517265875 34.0 29.0 35.5 7.0 38.0 76-77 28.306717879633535 32.0 27.0 34.5 4.5 36.0 78-79 29.230391867840616 33.5 29.0 35.0 3.5 37.0 80-81 29.243747644120845 34.0 29.0 35.0 2.0 36.5 82-83 28.879362315611157 34.0 29.0 35.0 2.0 36.0 84-85 28.3508331527244 33.5 28.5 35.0 2.0 35.5 86-87 27.79342187711572 33.0 27.0 35.0 2.0 35.0 88-89 27.218214488590736 33.0 26.0 35.0 2.0 35.0 90-91 26.68905017865036 32.0 25.0 34.0 2.0 35.0 92-93 26.201240163251498 32.0 24.5 34.0 2.0 35.0 94-95 25.645293344821823 32.0 23.5 34.0 2.0 35.0 96-97 24.80674004065429 31.5 19.0 34.0 2.0 35.0 98-99 23.721555923234227 31.0 2.0 34.0 2.0 35.0 100-101 20.16818913556974 25.5 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 16307.0 3 8592.0 4 5294.0 5 3955.0 6 3440.0 7 3587.0 8 4279.0 9 5196.0 10 6044.0 11 7180.0 12 8715.0 13 10207.0 14 11481.0 15 12818.0 16 14627.0 17 17312.0 18 17819.0 19 15892.0 20 16219.0 21 16934.0 22 18231.0 23 20109.0 24 22846.0 25 26508.0 26 31063.0 27 38195.0 28 45901.0 29 54744.0 30 67290.0 31 83689.0 32 105991.0 33 139655.0 34 193411.0 35 284379.0 36 422279.0 37 491712.0 38 201257.0 39 6115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.92115932098312 17.1451761577303 13.176508495868308 24.75715602541827 2 16.36857721773874 18.85142479098498 38.400291468250984 26.3797065230253 3 20.655123868607618 22.565224074452107 27.123487986440775 29.656164070499504 4 14.092542820013948 14.604088295198316 34.00225237870884 37.3011165060789 5 15.769508369370525 35.18864376144905 32.30290350978849 16.738944359391933 6 35.674830026080976 32.57632042575873 16.456608333706306 15.29224121445399 7 32.043128540450404 29.64690409852976 18.929876040237787 19.38009132078205 8 28.470710824468465 33.479309425491344 18.44997242342157 19.600007326618623 9 27.043390103948546 16.723705893293708 18.627184044807642 37.60571995795011 10-11 26.975234187188168 24.807632861075422 25.72635116916037 22.49078178257604 12-13 27.036486071230154 21.793310039011544 26.521684273076744 24.648519616681554 14-15 23.92584593701226 23.394526208545383 24.051998007932465 28.627629846509894 16-17 24.505169834014964 26.522278619671912 24.543629111822536 24.428922434490588 18-19 24.555505974111977 25.850700284783702 26.011030944651242 23.58276279645308 20-21 24.970913638163424 24.92838989574057 25.995042353932163 24.105654112163844 22-23 24.676519145254332 24.700499146055694 25.888475301107654 24.73450640758232 24-25 24.44367657502943 25.00471839711169 25.98232146764929 24.569283560209595 26-27 24.5843153602912 25.021687629002248 26.06639485109455 24.327602159612002 28-29 24.487243962608673 25.30847112811921 25.88495498736425 24.31932992190787 30-31 24.685252950454966 25.089490593880846 25.811169255655404 24.414087200008783 32-33 24.382432338739076 25.128200123335624 25.91444948210627 24.57491805581903 34-35 24.59539312292847 25.15405631648689 25.980746086602558 24.269804473982084 36-37 24.525598293935076 25.31401078165362 25.826395531177006 24.3339953932343 38-39 24.586768708824806 25.175335817147264 25.902219449475016 24.33567602455291 40-41 24.688992568765304 25.10568914569576 25.81251358671614 24.392804698822793 42-43 24.599076283468253 25.118514343712334 25.801684778277128 24.48072459454228 44-45 24.59904911289985 25.08892961963296 25.75764538523697 24.55437588223022 46-47 24.683283927313873 25.230197072975507 25.72521305392648 24.36130594578414 48-49 24.651714392077665 25.290269351171478 25.579669525901355 24.478346730849502 50-51 24.518974166700048 25.387159943288047 25.534836312649357 24.559029577362555 52-53 24.638385696576815 25.55853685860389 25.357700453660936 24.44537699115836 54-55 24.673266400725442 25.113147011820963 25.507463839719584 24.70612274773401 56-57 24.58078625171652 25.35321632718455 25.517457598791797 24.548539822307127 58-59 24.81608183971835 25.263861362385054 25.476406183033333 24.443650614863255 60-61 24.82322641353298 25.20610284413487 25.465298252626873 24.50537248970528 62-63 24.55704310411439 25.24173115948807 25.69408238542781 24.50714335096973 64-65 24.56636357000573 25.24699419486633 25.542262841146403 24.644379393981538 66-67 24.612520915887572 25.446288651553466 25.44295309248021 24.498237340078756 68-69 24.622985236767104 25.394855958287817 25.440710067357124 24.54144873758796 70-71 24.62106424095727 25.1676499964213 25.586480151216435 24.624805611404998 72-73 24.84540389009084 25.121405180306876 25.426794272774938 24.606396656827346 74-75 24.46214910905876 25.471487215559186 25.38123261703959 24.68513105834247 76-77 24.66882677280958 25.1707353876772 25.58728650429846 24.57315133521476 78-79 24.60269517626806 25.122885803640298 25.629139301910563 24.645279718181076 80-81 24.599622405973168 25.377344887176346 25.408726314699788 24.6143063921507 82-83 24.660980308976573 25.386932494601677 25.29761456874613 24.654472627675624 84-85 24.680361643031137 25.313405726739933 25.380571722322802 24.625660907906127 86-87 24.586427338367603 25.334443616458923 25.497281522925235 24.58184752224824 88-89 24.662020353369947 25.168688393331184 25.376726172010866 24.792565081288004 90-91 24.60145100132446 25.226894540402924 25.355106089051045 24.816548369221575 92-93 24.718959422675347 25.481134389733196 25.45125355101934 24.348652636572112 94-95 24.649496913978748 25.22241617520427 25.42322359344834 24.70486331736864 96-97 24.58100604094652 25.301076455964488 25.470505984930874 24.647411518158115 98-99 24.73181291177632 25.32379887686554 25.336242904159434 24.608145307198708 100-101 25.132783236678062 24.625134653852676 25.52215602320052 24.719926086268742 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 132.0 1 118.5 2 233.0 3 345.5 4 236.0 5 164.0 6 310.5 7 708.5 8 1074.5 9 1030.0 10 756.5 11 565.0 12 522.5 13 560.0 14 603.5 15 644.5 16 705.5 17 783.0 18 862.5 19 959.0 20 1034.5 21 1137.0 22 1292.5 23 1557.0 24 1852.5 25 2272.5 26 2899.0 27 3715.5 28 4840.0 29 6371.0 30 8429.0 31 10777.0 32 13782.5 33 17361.5 34 21000.0 35 25216.0 36 30471.0 37 35718.5 38 41009.5 39 47073.0 40 53176.0 41 58718.5 42 64770.5 43 72453.0 44 80866.5 45 89727.0 46 95252.5 47 100753.5 48 110155.5 49 113817.5 50 111059.0 51 108953.5 52 109309.0 53 109138.5 54 108602.5 55 105867.0 56 99933.5 57 93012.5 58 85839.5 59 79089.0 60 69263.0 61 58112.0 62 47328.5 63 36175.5 64 26817.5 65 20048.5 66 15181.0 67 11709.0 68 9012.5 69 6818.5 70 5139.0 71 3976.0 72 2973.5 73 2202.5 74 1685.0 75 1205.5 76 837.0 77 524.0 78 309.5 79 184.0 80 103.5 81 55.5 82 31.5 83 11.5 84 4.5 85 4.0 86 3.0 87 2.5 88 1.5 89 0.5 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3046835385904696 2 0.0 3 0.005489427159977765 4 0.05802527820213534 5 3.252993872579417E-4 6 0.0627421193173755 7 0.07246043851170651 8 0.10076148520314744 9 0.08913203210867601 10-11 0.09423516624628497 12-13 0.09384887322391616 14-15 0.06201019569604513 16-17 0.03368881779290059 18-19 0.037246779841034326 20-21 0.026288256732782414 22-23 0.03962553161035802 24-25 0.03297722538327384 26-27 0.02024988685680687 28-29 0.023360562247460935 30-31 0.003090344178950446 32-33 0.0052657838312379305 34-35 0.00766486681226525 36-37 0.011426140977435202 38-39 0.017078217831041936 40-41 0.021530753194135017 42-43 0.003131006602357689 44-45 0.01244270156261627 46-47 0.02295393801338851 48-49 0.0019721275352512714 50-51 0.007298905001600066 52-53 0.002338089345916456 54-55 0.003374981142801145 56-57 0.003496968413022873 58-59 0.001097885431995553 60-61 0.0050624717142017175 62-63 0.01394721122868425 64-65 0.006363669263233484 66-67 0.03718578620592346 68-69 0.060099061795904726 70-71 0.011426140977435202 72-73 0.03131006602357689 74-75 0.049872462308983186 76-77 0.29411130850458655 78-79 0.07353799273199844 80-81 0.033038219018384704 82-83 0.026023950980635334 84-85 0.01787113508748317 86-87 0.1155829385350874 88-89 0.5124278597780726 90-91 0.12914385674140286 92-93 0.04781900992691743 94-95 0.008152815893152164 96-97 0.005631745641903115 98-99 0.01065355493269759 100-101 0.007725860447376115 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2459273.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.726697646025976 #Duplication Level Percentage of deduplicated Percentage of total 1 77.2463603569886 46.13670009297825 2 13.416748666809857 16.02676182030549 3 4.06682345591261 7.286938047931766 4 1.7198405546314461 4.10881587223384 5 0.9217931564293335 2.752783057311536 6 0.6052614408737097 2.1690160245517247 7 0.39169287846392475 1.6376165485481504 8 0.2831828564780825 1.3530861477923521 9 0.1968312722350635 1.0580473695659638 >10 1.06511764765635 11.22206440856724 >50 0.05914035297727617 2.4327874854602083 >100 0.02529699991674537 2.73241557088465 >500 0.0014327704702524874 0.5727388986174268 >1k 4.775901567482888E-4 0.5102286552514246 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2712 0.11027649228044223 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 4.066242340724271E-5 0.0 10-11 0.0 0.0 0.0 4.066242340724271E-5 0.0 12-13 0.0 0.0 0.0 8.132484681448542E-5 0.0 14-15 0.0 0.0 0.0 8.132484681448542E-5 0.0 16-17 0.0 0.0 0.0 1.0165605851810677E-4 0.0 18-19 0.0 2.0331211703621355E-5 0.0 1.2198727022172813E-4 0.0 20-21 0.0 4.066242340724271E-5 0.0 1.2198727022172813E-4 0.0 22-23 0.0 4.066242340724271E-5 0.0 1.6264969362897084E-4 0.0 24-25 0.0 4.066242340724271E-5 0.0 1.6264969362897084E-4 4.066242340724271E-5 26-27 0.0 4.066242340724271E-5 0.0 2.4397454044345626E-4 4.066242340724271E-5 28-29 0.0 4.066242340724271E-5 0.0 5.489427159977767E-4 4.066242340724271E-5 30-31 0.0 4.066242340724271E-5 0.0 0.0018501402650295434 4.066242340724271E-5 32-33 0.0 4.066242340724271E-5 0.0 0.004167898399242378 4.066242340724271E-5 34-35 0.0 4.066242340724271E-5 0.0 0.0077461916590797365 4.066242340724271E-5 36-37 0.0 4.066242340724271E-5 0.0 0.012259720657283677 4.066242340724271E-5 38-39 0.0 4.066242340724271E-5 0.0 0.02041253655043584 4.066242340724271E-5 40-41 0.0 4.066242340724271E-5 0.0 0.028931314254253188 4.066242340724271E-5 42-43 0.0 4.066242340724271E-5 0.0 0.0372264486293307 4.066242340724271E-5 44-45 0.0 4.066242340724271E-5 0.0 0.04582655117996253 4.066242340724271E-5 46-47 0.0 4.066242340724271E-5 0.0 0.05434532888377988 4.066242340724271E-5 48-49 0.0 4.066242340724271E-5 0.0 0.06300642506952257 4.066242340724271E-5 50-51 0.0 4.066242340724271E-5 0.0 0.07223679518296668 4.066242340724271E-5 52-53 0.0 4.066242340724271E-5 0.0 0.08270736921033167 4.066242340724271E-5 54-55 0.0 4.066242340724271E-5 0.0 0.09258833809829164 4.066242340724271E-5 56-57 0.0 4.066242340724271E-5 0.0 0.10360785484165441 4.066242340724271E-5 58-59 0.0 4.066242340724271E-5 0.0 0.11509498945420049 4.066242340724271E-5 60-61 0.0 4.066242340724271E-5 0.0 0.12737504132318778 4.066242340724271E-5 62-63 0.0 4.066242340724271E-5 0.0 0.13760164081010934 4.066242340724271E-5 64-65 0.0 4.066242340724271E-5 0.0 0.1479502275672526 4.066242340724271E-5 66-67 0.0 4.066242340724271E-5 0.0 0.16010829216601818 4.066242340724271E-5 68-69 0.0 4.066242340724271E-5 0.0 0.17275430584567064 4.066242340724271E-5 70-71 0.0 4.066242340724271E-5 0.0 0.1851766761965833 4.066242340724271E-5 72-73 0.0 4.066242340724271E-5 0.0 0.19625718657505692 1.0165605851810677E-4 74-75 0.0 4.066242340724271E-5 0.0 0.20874055056108046 1.2198727022172813E-4 76-77 0.0 4.066242340724271E-5 0.0 0.22140689545243655 1.2198727022172813E-4 78-79 0.0 6.0993635110864064E-5 0.0 0.23513046335238097 1.6264969362897084E-4 80-81 0.0 8.132484681448542E-5 0.0 0.24875237519380727 1.6264969362897084E-4 82-83 4.066242340724271E-5 8.132484681448542E-5 0.0 0.2627605800576024 2.0331211703621355E-4 84-85 4.066242340724271E-5 8.132484681448542E-5 0.0 0.2771550779437663 2.0331211703621355E-4 86-87 4.066242340724271E-5 8.132484681448542E-5 0.0 0.29242381793318595 2.0331211703621355E-4 88-89 4.066242340724271E-5 8.132484681448542E-5 0.0 0.30883110577800843 2.0331211703621355E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 3735 0.0 46.028984 1 TACCTGG 3700 0.0 45.18329 2 ACCTGGG 4600 0.0 35.414574 3 GTATCAA 6730 0.0 25.96963 1 TATAACG 225 1.0186341E-10 25.330027 2 GTACATG 7015 0.0 24.575119 1 TACATGG 7155 0.0 23.365221 2 TCAACGC 7785 0.0 22.207382 4 CCTGGGG 5240 0.0 22.025694 4 CAACGCA 7870 0.0 21.838825 5 ACATGGG 7335 0.0 21.821043 3 ATCAACG 8030 0.0 21.470238 3 TATCAAC 8135 0.0 21.426214 2 AACGCAG 8460 0.0 20.428028 6 ATAACGC 305 2.0918378E-10 20.243671 3 TAACGCA 285 1.9699655E-9 19.998203 4 GTATAAC 495 0.0 19.24153 1 GGTATCA 5010 0.0 18.725924 1 CATGGGG 6045 0.0 18.699726 4 TACACGG 535 0.0 18.642426 2 >>END_MODULE