##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921457_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2693392 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.393818649494765 31.0 31.0 34.0 27.0 34.0 2 30.493484424101652 31.0 31.0 34.0 27.0 34.0 3 30.62905213945835 31.0 31.0 34.0 27.0 34.0 4 34.12438144911695 37.0 35.0 37.0 30.0 37.0 5 34.11784545287132 37.0 35.0 37.0 30.0 37.0 6 34.211013844252896 37.0 35.0 37.0 30.0 37.0 7 34.096837370869146 37.0 35.0 37.0 30.0 37.0 8 34.07838108971884 37.0 35.0 37.0 30.0 37.0 9 35.54060864515822 39.0 37.0 39.0 30.0 39.0 10-11 35.413911528659774 39.0 36.0 39.0 30.0 39.0 12-13 35.25378351907186 39.0 35.0 39.0 30.0 39.0 14-15 36.28958892727089 40.0 36.5 41.0 29.0 41.0 16-17 36.14044595068226 40.0 36.0 41.0 28.5 41.0 18-19 35.959297049965244 39.0 36.0 41.0 27.5 41.0 20-21 35.847350478504424 39.0 36.0 41.0 27.0 41.0 22-23 35.89622453768334 39.0 36.0 41.0 27.0 41.0 24-25 35.76710204084664 39.0 36.0 41.0 27.0 41.0 26-27 35.505715840843074 39.0 36.0 41.0 26.5 41.0 28-29 35.276747127785335 39.0 35.0 40.0 25.5 41.0 30-31 35.036509353261614 39.0 35.0 40.0 24.5 41.0 32-33 34.77888755145928 38.5 34.5 40.0 24.0 41.0 34-35 34.37033042349572 38.0 34.0 40.0 21.5 41.0 36-37 34.00339905962444 38.0 33.5 40.0 18.5 41.0 38-39 33.77545878951152 38.0 33.0 40.0 17.5 41.0 40-41 33.51671052709743 38.0 33.0 40.0 15.5 41.0 42-43 33.24367043490142 38.0 33.0 40.0 15.0 41.0 44-45 32.93822102389849 38.0 32.0 40.0 11.0 41.0 46-47 32.66607367215764 38.0 32.0 40.0 9.0 41.0 48-49 32.469220039266474 37.0 31.0 40.0 8.5 41.0 50-51 31.724857168952756 36.0 30.5 39.0 8.0 40.0 52-53 32.218356629855585 37.0 31.5 39.0 7.5 40.0 54-55 32.651790938712224 37.0 32.0 40.0 7.0 41.0 56-57 32.508966388850936 37.0 32.0 40.0 2.0 41.0 58-59 32.181100263162584 37.0 31.5 40.0 2.0 41.0 60-61 31.726032824037496 36.0 31.0 39.0 2.0 41.0 62-63 31.24932241574936 35.5 30.5 39.0 2.0 40.0 64-65 30.712650999186156 35.0 30.0 38.5 2.0 40.0 66-67 30.226987011174018 35.0 29.0 38.0 2.0 40.0 68-69 29.711482769682245 34.5 29.0 37.5 2.0 39.5 70-71 29.184136768803057 34.0 28.0 37.0 2.0 39.0 72-73 28.62294961149361 34.0 27.5 36.0 2.0 39.0 74-75 28.02094366508848 34.0 26.0 35.5 2.0 38.0 76-77 27.43440019128296 33.0 26.0 35.0 2.0 37.0 78-79 26.865310173936805 33.0 25.0 35.0 2.0 37.0 80-81 26.28510740360111 32.0 23.5 35.0 2.0 36.0 82-83 25.654273124743817 32.0 21.0 34.5 2.0 35.5 84-85 25.030910094037555 31.5 19.0 34.0 2.0 35.0 86-87 24.40930711162727 31.0 16.5 34.0 2.0 35.0 88-89 23.76131584262521 31.0 7.0 34.0 2.0 35.0 90-91 23.017272272287137 30.0 2.0 34.0 2.0 35.0 92-93 22.198177613952964 29.5 2.0 34.0 2.0 35.0 94-95 21.28362228743532 29.0 2.0 34.0 2.0 35.0 96-97 20.39308407391126 29.0 2.0 33.5 2.0 34.5 98 19.76965996780268 27.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 84998.0 3 14723.0 4 11385.0 5 9370.0 6 8843.0 7 9272.0 8 10147.0 9 12118.0 10 13632.0 11 14607.0 12 16061.0 13 18811.0 14 15790.0 15 15543.0 16 17117.0 17 19333.0 18 21603.0 19 21882.0 20 22919.0 21 24615.0 22 27070.0 23 30431.0 24 33830.0 25 37633.0 26 42795.0 27 48765.0 28 56318.0 29 66388.0 30 78330.0 31 95365.0 32 118476.0 33 152620.0 34 205912.0 35 287395.0 36 398419.0 37 429618.0 38 192756.0 39 8502.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.60019159039049 16.7253263023838 12.567150827818955 25.107331279406758 2 16.220279277375084 18.271379213891134 38.876062910402936 26.632278598330846 3 20.530764755662908 21.72724415579977 27.59042786760155 30.151563220935774 4 13.659760686808797 14.246341762417947 34.52681593093277 37.56708161984048 5 15.254511841354384 35.68976483735971 33.06662545177858 15.989097869507324 6 35.69727761626557 32.824350055265036 16.488858753703685 14.989513574765704 7 31.842158536064435 29.91224632688197 18.806512901182863 19.439082235870732 8 28.37964150976328 34.02701210230419 18.332526859658355 19.260819528274176 9 26.964543125964997 16.196141280897493 18.484651792152892 38.35466380098462 10-11 27.06371103700788 24.73465803174226 25.891590603578248 22.310040327671615 12-13 26.88035730464915 21.65162425382057 26.513710095460468 24.954308346069812 14-15 23.88989965812502 23.328896428759087 23.90902371327137 28.87218019984452 16-17 24.555332464155708 26.521936585186523 24.453270314860895 24.469460635796874 18-19 24.540318530208065 25.797960075248973 25.823964360755227 23.83775703378774 20-21 24.987374783680526 25.030146303868055 25.79880737691668 24.183671535534735 22-23 24.745080046287082 24.825471052083373 25.580042663354398 24.84940623827515 24-25 24.572778146334503 25.040429258875257 25.722204501362565 24.664588093427675 26-27 24.650842426375252 25.156792495811004 25.714526731369315 24.477838346444432 28-29 24.515976671747826 25.373041702929704 25.62859858802684 24.482383037295623 30-31 24.7339347088453 25.266483231222836 25.535599484874933 24.463982575056928 32-33 24.5588020094769 25.202492755647103 25.50966743201896 24.729037802857036 34-35 24.690605362293667 25.256946655145757 25.633438925125752 24.419009057434828 36-37 24.755552525174217 25.248809355908016 25.467445142573737 24.528192976344034 38-39 24.694175256682925 25.244294778476256 25.571409020324587 24.49012094451623 40-41 24.81268323046072 25.150939052902366 25.581348023570744 24.455029693066166 42-43 24.749196714625814 25.072452001190815 25.547918550642674 24.6304327335407 44-45 24.724634684440737 25.197377334554066 25.468814325154828 24.609173655850366 46-47 24.757478572072348 25.243314484706225 25.476081314257428 24.523125628964003 48-49 24.74799029407896 25.296928977174666 25.3620455946929 24.593035134053473 50-51 24.58486181094413 25.44630177774278 25.343611221728374 24.625225189584718 52-53 24.711021981061442 25.419831232690875 25.317188078079766 24.551958708167916 54-55 24.672019309543423 25.16724830791313 25.472395254165896 24.688337128377547 56-57 24.600253807106597 25.38754105703195 25.457953866825918 24.554251269035532 58-59 24.731394052970575 25.37608564194046 25.407151294579442 24.48536901050952 60-61 24.798531039077123 25.17638914028838 25.453312159794283 24.57176766084021 62-63 24.627748252280725 25.325641545805183 25.497973319368622 24.548636882545463 64-65 24.630854693834888 25.2308278143223 25.482039259021438 24.65627823282138 66-67 24.618162298410624 25.405204565080403 25.342544402175182 24.634088734333794 68-69 24.64755718027828 25.32135096175739 25.39534809070611 24.63574376725822 70-71 24.60104004251345 25.17086426044375 25.494788689020055 24.733307008022752 72-73 24.762807588292198 25.15986114874738 25.39785083803665 24.679480424923774 74-75 24.542361883487924 25.378719722699504 25.356624437013053 24.722293956799522 76-77 24.681651690780445 25.198968276035956 25.373222283700965 24.746157749482638 78-79 24.69386761833883 25.119535541416145 25.475965062671662 24.710631777573358 80-81 24.604402778303513 25.27035576851896 25.406477648694043 24.718763804483483 82-83 24.784845643161578 25.256969203235073 25.332765606337652 24.625419547265697 84-85 24.723432920166154 25.23574506103913 25.28153582521352 24.7592861935812 86-87 24.710023669444418 25.186768603446847 25.496829935181708 24.60637779192703 88-89 24.691112349892325 25.044811532327806 25.388588860555238 24.87548725722463 90-91 24.67150137873577 25.13988741878437 25.336069174720173 24.852542027759693 92-93 24.73632120203895 25.23658653098531 25.443144090212588 24.58394817676315 94-95 24.811306452121208 25.089104380002652 25.351107527397044 24.748481640479095 96-97 24.796447421294403 25.10792272414092 25.348950607557715 24.746679247006963 98 24.773946460169565 25.26634732459338 25.20668045220031 24.753025763036746 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 280.0 1 196.5 2 173.5 3 226.5 4 195.0 5 183.5 6 250.5 7 443.0 8 661.5 9 744.0 10 745.5 11 803.5 12 930.0 13 1073.0 14 1279.5 15 1511.0 16 1669.5 17 1714.0 18 1757.0 19 1734.0 20 1574.0 21 1429.5 22 1371.0 23 1416.0 24 1464.5 25 1643.5 26 2031.5 27 2706.5 28 3764.0 29 5342.0 30 7639.0 31 10709.5 32 14716.0 33 19399.5 34 24741.5 35 31049.5 36 38351.0 37 45820.0 38 53211.5 39 60904.5 40 68421.5 41 75889.0 42 84134.0 43 93290.5 44 101392.5 45 108264.5 46 116227.0 47 124263.5 48 127651.0 49 126668.5 50 125867.0 51 125243.5 52 124759.5 53 124735.5 54 122555.0 55 116367.0 56 107678.5 57 99848.0 58 91982.5 59 82706.5 60 72145.5 61 60186.5 62 48332.0 63 36807.5 64 26817.0 65 20007.5 66 15330.5 67 11570.0 68 8737.0 69 6707.5 70 4956.0 71 3688.0 72 2959.0 73 2251.0 74 1690.0 75 1246.5 76 803.0 77 516.5 78 311.5 79 181.0 80 111.0 81 71.5 82 49.0 83 29.0 84 20.5 85 14.5 86 9.5 87 6.5 88 8.0 89 7.0 90 4.5 91 3.5 92 3.0 93 4.0 94 3.5 95 4.0 96 4.0 97 1.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.47052192922530406 2 0.05097661239062119 3 0.05858783274027694 4 0.05650867010817586 5 0.06712725069354925 6 0.06746140183085121 7 0.044442101261160646 8 0.022239614582652657 9 0.01388583615010366 10-11 0.01678181267338731 12-13 0.012623487409185147 14-15 0.016651865008880995 16-17 0.015779359261481433 18-19 0.056731437533043834 20-21 0.0872134468358115 22-23 0.10367967232396919 24-25 0.07286351188389956 26-27 0.0896638885093592 28-29 0.08932973737205724 30-31 0.060091512858135764 32-33 0.035271508937429086 34-35 0.398530923088804 36-37 0.6235445861575292 38-39 0.5728278690959208 40-41 0.5658849510208688 42-43 0.5401924413527626 44-45 0.5247286692765107 46-47 0.5155766409048516 48-49 0.5043640138531637 50-51 0.5191594836548115 52-53 0.5998198554090901 54-55 0.5694677937708287 56-57 0.5269192156210458 58-59 0.5043268859490189 60-61 0.5178228791056037 62-63 0.5293510933425213 64-65 0.5484534000249499 66-67 0.5737931946036819 68-69 0.5284785875951217 70-71 0.476295318319799 72-73 0.4601446800168709 74-75 0.43901890255855813 76-77 0.4547611339158949 78-79 0.448375134403013 80-81 0.44447670446782345 82-83 0.46506412731603863 84-85 0.43174183334620436 86-87 0.4330784378954121 88-89 0.4619268194158147 90-91 0.44367845452871324 92-93 0.4386661874691838 94-95 0.4502315296102461 96-97 0.4440311696180875 98 0.4394830013603664 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2693392.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.389287247726834 #Duplication Level Percentage of deduplicated Percentage of total 1 78.35117626741938 48.88274042345305 2 12.966738582355353 16.179711561615008 3 3.918593088328625 7.334346893840747 4 1.6279089151022466 4.062563076697977 5 0.8613604167273167 2.6869831231511125 6 0.5137717548399114 1.9232312155485554 7 0.34177378653964 1.492611605951541 8 0.23666743821568106 1.1812410228017414 9 0.17945986422970922 1.0076735716978849 >10 0.9250487414528599 10.253374417151644 >50 0.05515151444245582 2.3361014339728774 >100 0.0216318025587243 2.2541941806064396 >500 5.383708410570536E-4 0.2529219550551118 >1k 1.7945694701846748E-4 0.15230551845616003 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 3.7127904144662194E-5 0.0 0.0 0.0 0.0 3 3.7127904144662194E-5 0.0 0.0 0.0 0.0 4 3.7127904144662194E-5 0.0 0.0 0.0 0.0 5 3.7127904144662194E-5 0.0 0.0 0.0 0.0 6 3.7127904144662194E-5 0.0 0.0 0.0 0.0 7 3.7127904144662194E-5 0.0 0.0 0.0 0.0 8 3.7127904144662194E-5 0.0 0.0 0.0 0.0 9 3.7127904144662194E-5 0.0 0.0 3.7127904144662194E-5 0.0 10-11 3.7127904144662194E-5 0.0 0.0 5.5691856216993294E-5 7.425580828932439E-5 12-13 3.7127904144662194E-5 0.0 0.0 9.281976036165548E-5 2.2276742486797318E-4 14-15 5.5691856216993294E-5 0.0 0.0 1.1138371243398659E-4 3.3415113730195977E-4 16-17 1.1138371243398659E-4 0.0 0.0 1.1138371243398659E-4 4.0840694559128414E-4 18-19 1.4851161657864878E-4 3.7127904144662194E-5 0.0 1.6707556865097988E-4 4.0840694559128414E-4 20-21 1.85639520723311E-4 5.5691856216993294E-5 0.0 1.85639520723311E-4 4.6409880180827746E-4 22-23 1.85639520723311E-4 7.425580828932439E-5 0.0 2.2276742486797318E-4 5.383546100976018E-4 24-25 2.784592810849665E-4 7.425580828932439E-5 0.0 2.784592810849665E-4 5.569185621699329E-4 26-27 2.9702323315729755E-4 7.425580828932439E-5 0.0 4.6409880180827746E-4 5.940464663145951E-4 28-29 2.9702323315729755E-4 7.425580828932439E-5 0.0 0.0012623487409185146 5.940464663145951E-4 30-31 2.9702323315729755E-4 7.425580828932439E-5 0.0 0.004176889216274497 6.311743704592573E-4 32-33 2.9702323315729755E-4 7.425580828932439E-5 0.0 0.009244848132020887 7.42558082893244E-4 34-35 2.9702323315729755E-4 7.425580828932439E-5 0.0 0.015278132555528495 7.982499391102372E-4 36-37 2.9702323315729755E-4 9.281976036165548E-5 0.0 0.02500564344142999 8.168138911825683E-4 38-39 2.9702323315729755E-4 1.1138371243398659E-4 0.0 0.041676072402383316 9.281976036165549E-4 40-41 2.9702323315729755E-4 1.1138371243398659E-4 0.0 0.058884855973434236 9.281976036165549E-4 42-43 2.9702323315729755E-4 1.1138371243398659E-4 0.0 0.07553672098231523 9.281976036165549E-4 44-45 2.9702323315729755E-4 1.299476645063177E-4 0.0 0.09326529521139143 0.0010395813160505416 46-47 2.9702323315729755E-4 1.4851161657864878E-4 0.0 0.11138371243398659 0.0012066568847015212 48-49 2.9702323315729755E-4 1.4851161657864878E-4 0.0 0.13146990857624885 0.0012623487409185146 50-51 2.9702323315729755E-4 1.4851161657864878E-4 0.0 0.1510920059167028 0.001336604549207839 52-53 2.9702323315729755E-4 1.4851161657864878E-4 0.0 0.17075123116130142 0.001503680117858819 54-55 2.9702323315729755E-4 2.0420347279564207E-4 0.0 0.1890552879046199 0.0015593719740758121 56-57 2.9702323315729755E-4 2.2276742486797318E-4 0.0 0.20930855961553313 0.0016707556865097988 58-59 2.9702323315729755E-4 2.4133137694030428E-4 0.0 0.229821726655459 0.0017821393989437854 60-61 2.9702323315729755E-4 2.598953290126354E-4 0.0 0.24964802746870862 0.0017821393989437854 62-63 2.9702323315729755E-4 2.784592810849665E-4 0.0 0.26943720037781355 0.0018192673030884476 64-65 2.9702323315729755E-4 3.3415113730195977E-4 0.0 0.290377338315403 0.0018192673030884476 66-67 2.9702323315729755E-4 3.3415113730195977E-4 0.0 0.31478893529051843 0.0018563952072331098 68-69 3.3415113730195977E-4 3.3415113730195977E-4 0.0 0.3385322299910299 0.0018563952072331098 70-71 3.3415113730195977E-4 3.712790414466219E-4 0.0 0.36283244325371133 0.001893523111377772 72-73 3.3415113730195977E-4 4.0840694559128414E-4 0.0 0.3867056856187291 0.002060598680028752 74-75 3.3415113730195977E-4 4.0840694559128414E-4 0.0 0.409465090859407 0.0022091102966074003 76-77 3.71279041446622E-4 4.0840694559128414E-4 0.0 0.43432222268425835 0.0022276742486797316 78-79 3.71279041446622E-4 4.0840694559128414E-4 0.0 0.46118426133292145 0.002301930056969056 80-81 3.71279041446622E-4 4.0840694559128414E-4 0.0 0.48533596297902426 0.0023947498173307116 82-83 3.71279041446622E-4 4.2697089766361525E-4 0.0 0.5110656005512751 0.0025246974818370293 84-85 3.71279041446622E-4 4.4553484973594635E-4 0.0 0.5363497032737901 0.0025432614339093605 86 3.71279041446622E-4 4.4553484973594635E-4 0.0 0.5568071784574989 0.0025618253859816917 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 3265 0.0 34.542854 1 TACCTGG 3580 0.0 31.247776 2 GTATCAA 4860 0.0 29.457743 1 GGTATCA 3185 0.0 27.4612 1 TCAACGC 5320 0.0 25.6813 4 GTACATG 8200 0.0 24.869394 1 CAACGCA 5525 0.0 24.562454 5 ACCTGGG 4355 0.0 24.21319 3 ATCAACG 5700 0.0 23.888779 3 TACATGG 8325 0.0 23.570665 2 AACGCAG 5905 0.0 23.285881 6 TATCAAC 5840 0.0 23.237597 2 ACATGGG 8070 0.0 22.89517 3 GAGTACA 6040 0.0 20.730381 1 GTATAGG 755 0.0 20.730381 1 AGTACAT 5675 0.0 20.600922 2 CATGGGG 6270 0.0 19.742792 4 ACGCAGA 6955 0.0 19.565788 7 GTGTAGC 1530 0.0 19.255903 1 CGCAGAG 7350 0.0 18.448187 8 >>END_MODULE