##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921457_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2693392 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.938679924793718 33.0 31.0 34.0 30.0 34.0 2 32.05466378455123 34.0 31.0 34.0 30.0 34.0 3 32.17811703606456 34.0 31.0 34.0 30.0 34.0 4 35.7131665201352 37.0 35.0 37.0 35.0 37.0 5 35.520776775159355 37.0 35.0 37.0 33.0 37.0 6 35.553448959527614 37.0 35.0 37.0 33.0 37.0 7 35.4847749603474 37.0 35.0 37.0 33.0 37.0 8 35.442093464300775 37.0 35.0 37.0 33.0 37.0 9 37.06585450613947 39.0 37.0 39.0 34.0 39.0 10-11 36.97232114746015 39.0 37.0 39.0 33.0 39.0 12-13 36.849341276724665 39.0 37.0 39.0 33.0 39.0 14-15 38.15924306599263 40.0 38.0 41.0 33.0 41.0 16-17 38.061496989669536 40.0 38.0 41.0 33.0 41.0 18-19 37.95111034710135 40.0 38.0 41.0 33.0 41.0 20-21 37.832481309813055 40.0 38.0 41.0 33.0 41.0 22-23 37.79954904447626 40.0 38.0 41.0 33.0 41.0 24-25 37.85705032910174 40.0 38.0 41.0 33.0 41.0 26-27 37.75184915526593 40.0 38.0 41.0 33.0 41.0 28-29 37.6247796458889 40.0 38.0 41.0 32.0 41.0 30-31 37.49813395153769 40.0 38.0 41.0 32.0 41.0 32-33 37.348358501101956 40.0 37.0 41.0 32.0 41.0 34-35 37.20846148648247 40.0 37.0 41.0 31.0 41.0 36-37 37.114317188140454 40.0 37.0 41.0 31.0 41.0 38-39 37.0903370174115 40.0 37.0 41.0 31.0 41.0 40-41 36.936452807463596 40.0 37.0 41.0 31.0 41.0 42-43 36.70900392516202 40.0 36.0 41.0 30.0 41.0 44-45 36.51865584363509 39.0 36.0 41.0 30.0 41.0 46-47 36.269778034537865 39.0 35.5 40.5 30.0 41.0 48-49 35.96026701646103 39.0 35.0 40.0 29.0 41.0 50-51 35.692705703440126 39.0 35.0 40.0 28.0 41.0 52-53 35.385657750524246 38.0 35.0 40.0 28.0 41.0 54-55 35.055913138525696 38.0 34.0 40.0 27.0 41.0 56-57 34.67606831831386 38.0 34.0 40.0 26.0 41.0 58-59 34.28352705436119 37.0 33.5 40.0 26.0 41.0 60-61 33.85978776947433 37.0 33.0 39.5 25.0 41.0 62-63 33.41173082120984 36.0 32.5 39.0 23.5 40.0 64-65 32.89297955886109 35.5 32.0 39.0 22.0 40.0 66-67 32.35399043288166 35.0 31.0 38.0 21.5 40.0 68-69 31.847824044921794 35.0 31.0 37.5 20.0 40.0 70-71 31.283085974859954 34.5 30.5 37.0 18.0 39.0 72-73 30.72130607056084 34.0 30.0 36.0 16.0 39.0 74-75 30.191395088423818 34.0 29.0 36.0 12.0 38.5 76-77 28.909921764080387 32.5 28.0 34.5 10.5 36.0 78-79 29.835707539043703 34.0 29.5 35.0 11.0 37.0 80-81 29.85631408276255 34.0 30.0 35.0 7.5 36.5 82-83 29.50875884386677 34.0 29.5 35.0 6.5 36.0 84-85 29.00831850692361 34.0 29.0 35.0 2.0 36.0 86-87 28.475509320589055 33.5 29.0 35.0 2.0 35.0 88-89 27.919021627746723 33.0 27.0 35.0 2.0 35.0 90-91 27.435031551292944 33.0 26.5 35.0 2.0 35.0 92-93 26.988109974337192 32.5 25.5 34.0 2.0 35.0 94-95 26.476357878838286 32.0 25.0 34.0 2.0 35.0 96-97 25.689079977960876 32.0 23.5 34.0 2.0 35.0 98-99 24.661209916714682 32.0 11.0 34.0 2.0 35.0 100-101 21.054730243499648 27.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 17845.0 3 9380.0 4 5520.0 5 4179.0 6 3600.0 7 3580.0 8 4189.0 9 5105.0 10 5955.0 11 7094.0 12 8134.0 13 9586.0 14 10669.0 15 11863.0 16 13275.0 17 14914.0 18 15595.0 19 15190.0 20 15552.0 21 16483.0 22 17796.0 23 19571.0 24 22389.0 25 26208.0 26 31283.0 27 37632.0 28 44869.0 29 55363.0 30 68313.0 31 84582.0 32 108237.0 33 143276.0 34 203238.0 35 303561.0 36 472095.0 37 587729.0 38 261587.0 39 7954.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.8699694565 17.177469243280225 12.895680968095991 25.056880332123782 2 16.277912758335958 18.47365700945128 38.660618283562144 26.587811948650625 3 20.568381561740456 21.854014479289894 27.78081007683722 29.796793882132434 4 13.8733597848216 14.503551632413474 34.45558973444489 37.16749884832004 5 15.236877083812905 35.686720774640044 33.175786558153696 15.900615583393357 6 35.768112043685655 32.945954310328496 16.2665380687199 15.019395577265954 7 31.924105304929796 29.87822278237942 18.782577096341257 19.415094816349523 8 28.42391455847344 34.07733521155029 18.287415512758802 19.21133471721746 9 26.925419638334507 16.157474146443345 18.432237797347955 38.484868417874196 10-11 27.086054098410617 24.747261519753405 25.948944634273424 22.217739747562554 12-13 26.878229147077775 21.6349602300643 26.528044847375764 24.958765775482156 14-15 23.82624335270778 23.362597797186694 23.908629187025504 28.902529663080017 16-17 24.53420912862454 26.492231866617637 24.552965558737338 24.42059344602048 18-19 24.51605426766454 25.84581744787909 25.839744621881156 23.798383662575215 20-21 24.978450316885258 25.044687042150475 25.835943868692702 24.140918772271565 22-23 24.73108274678459 24.807264902739604 25.645751489052852 24.81590086142295 24-25 24.5537723865907 25.050901406149023 25.76918505753103 24.626141149729243 26-27 24.562907506900288 25.224183918546434 25.75242148340635 24.46048709114693 28-29 24.51117725592286 25.366716863275208 25.71511598758887 24.40698989321306 30-31 24.676476157590475 25.200422528412993 25.631119329004086 24.491981984992446 32-33 24.452520189362296 25.1755499860763 25.614554905782978 24.757374918778428 34-35 24.641797584259443 25.264465295543914 25.76595610377362 24.327781016423025 36-37 24.643392699963442 25.284896886459162 25.553952501621257 24.517757911956135 38-39 24.56262175183013 25.233960321992978 25.725089473437958 24.478328452738936 40-41 24.739800827453237 25.145599016057762 25.636493205503037 24.478106950985968 42-43 24.723025759096366 25.117300294322842 25.61351293449934 24.54616101208146 44-45 24.590747112917203 25.160412055537595 25.59583941471671 24.65300141682849 46-47 24.62666973171767 25.225041714279563 25.68082569205967 24.467462861943094 48-49 24.56869313258031 25.32192538148 25.532724222763974 24.576657263175715 50-51 24.539719440083186 25.375001647655047 25.500613298980422 24.58466561328134 52-53 24.68025676735851 25.36504026795053 25.41930388852771 24.53539907616325 54-55 24.704156924045144 25.14245190107592 25.466685107643013 24.68670606723592 56-57 24.588408512916608 25.384496428260473 25.457641020081162 24.569454038741757 58-59 24.704875956008834 25.371571335273167 25.445271127985535 24.47828158073246 60-61 24.865501692286585 25.203587710681834 25.428056331208825 24.502854265822755 62-63 24.55907095674092 25.233298688046485 25.596127303048227 24.611503052164366 64-65 24.641975097778175 25.252101253762465 25.48028591123578 24.62563773722358 66-67 24.626329880089795 25.437852016158384 25.341244891076485 24.59457321267533 68-69 24.665928847646317 25.31835627593837 25.444093862764923 24.571621013650393 70-71 24.557815652210078 25.178839910569835 25.509171567861138 24.754172869358953 72-73 24.738148750711 25.17315153528592 25.404292609335187 24.68440710466789 74-75 24.554326313005387 25.409845200134324 25.31318815211932 24.722640334740966 76-77 24.644520641682952 25.212505574366944 25.404403447309548 24.73857033664056 78-79 24.631218074568594 25.181390696685924 25.5145967122286 24.672794516516884 80-81 24.554026818280494 25.317438047699596 25.4478395085228 24.68069562549711 82-83 24.696613615211437 25.280601766467132 25.371424560444417 24.651360057877017 84-85 24.64782560580977 25.318956700764474 25.314500442283656 24.718717251142102 86-87 24.587499414536882 25.303678790028023 25.505988823044422 24.602832972390676 88-89 24.602447821480684 25.15891169863687 25.440148221165 24.798492258717445 90-91 24.584276480189875 25.2197144135518 25.398445273874604 24.797563832383727 92-93 24.609729334580436 25.434121093300188 25.511625470913852 24.444524101205527 94-95 24.663533435010194 25.2202560363289 25.368965411610283 24.747245117050614 96-97 24.625449339193146 25.260664536534804 25.435434114152716 24.678452010119333 98-99 24.580010296563685 25.30533692840472 25.434684492754993 24.679968282276597 100-101 25.109279710946463 24.641119766850146 25.56028536276594 24.68931515943745 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 48.0 1 39.0 2 67.5 3 99.0 4 76.0 5 66.5 6 133.0 7 304.0 8 477.0 9 507.0 10 407.5 11 322.0 12 317.0 13 325.0 14 342.0 15 377.0 16 419.5 17 478.0 18 529.5 19 541.0 20 560.0 21 641.5 22 691.0 23 779.0 24 943.0 25 1146.0 26 1478.5 27 1965.0 28 2675.0 29 3863.5 30 5654.0 31 8111.5 32 11568.5 33 15760.0 34 20462.5 35 25976.5 36 32874.0 37 40565.5 38 47596.5 39 54598.0 40 62493.5 41 69784.5 42 77185.5 43 85779.5 44 94827.0 45 103685.5 46 110382.5 47 116493.0 48 124819.0 49 128442.5 50 125606.0 51 123584.5 52 123243.5 53 122325.5 54 120665.0 55 115643.5 56 107387.5 57 98932.0 58 90724.0 59 81925.5 60 71182.5 61 60190.0 62 48676.0 63 36641.0 64 26972.5 65 20176.5 66 15173.0 67 11685.0 68 8987.5 69 6780.0 70 5174.5 71 3934.5 72 2888.0 73 2200.0 74 1711.0 75 1256.5 76 847.5 77 508.5 78 307.0 79 184.0 80 103.0 81 54.0 82 28.0 83 16.5 84 9.5 85 5.5 86 4.0 87 1.0 88 2.5 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3107234297866779 2 0.0 3 0.006163232088013924 4 0.062077855729875196 5 4.4553484973594635E-4 6 0.06679309955624729 7 0.07737455223747601 8 0.10755953830708638 9 0.0951588183227692 10-11 0.0989829924496694 12-13 0.0989829924496694 14-15 0.06640325656272833 16-17 0.03645960187005828 18-19 0.03974542138686088 20-21 0.028848381520402522 22-23 0.04308693275988047 24-25 0.03460320666282517 26-27 0.021144341410385122 28-29 0.02402175398159644 30-31 0.0030444881398623003 32-33 0.005272162388542032 34-35 0.008242394720115006 36-37 0.009968842262841799 38-39 0.015370952315890148 40-41 0.02045747518370887 42-43 0.00337863927716426 44-45 0.015055365130660522 46-47 0.024838567872779008 48-49 0.002450441673547705 50-51 0.006330307656664904 52-53 0.0021905463445350696 54-55 0.004251145024563821 56-57 0.0035828427499599016 58-59 0.0012252208367738524 60-61 0.005290726340614363 62-63 0.014294243095694945 64-65 0.006627330889822202 66-67 0.03876153192702733 68-69 0.06218923944230918 70-71 0.012660615313329808 72-73 0.03269111959937506 74-75 0.05197906580252708 76-77 0.30108873866113806 78-79 0.07291920374011655 80-81 0.03480741013562081 82-83 0.02918253265770449 84-85 0.020420347279564207 86-87 0.1193290839209443 88-89 0.5254526634073318 90-91 0.1334191235438436 92-93 0.047746484730035586 94-95 0.008149574959753351 96-97 0.004882319395023078 98-99 0.009671819029684501 100-101 0.0069986099312688245 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2693392.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.39082441264863 #Duplication Level Percentage of deduplicated Percentage of total 1 75.07019473254408 43.834105592513204 2 14.623740792032237 17.077845616872825 3 4.669714048541227 8.18005359196948 4 1.9446651357534868 4.542024019327254 5 0.9915882581536649 2.894982793574737 6 0.6094888139296953 2.135313258938538 7 0.40246587200708933 1.6450219845114626 8 0.278671005977419 1.3017463823138904 9 0.2118051561292611 1.1130729913113582 >10 1.10339251682888 11.55885109345731 >50 0.06691075496690399 2.6755126023738227 >100 0.026280410542702307 2.5387416450820064 >500 7.641194777380531E-4 0.28596141838424516 >1k 3.1838311569710526E-4 0.2167670093698886 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.425580828932439E-5 2 0.0 0.0 0.0 0.0 7.425580828932439E-5 3 0.0 0.0 0.0 0.0 7.425580828932439E-5 4 0.0 0.0 0.0 0.0 7.425580828932439E-5 5 0.0 3.7127904144662194E-5 0.0 0.0 7.425580828932439E-5 6 3.7127904144662194E-5 3.7127904144662194E-5 0.0 0.0 7.425580828932439E-5 7 3.7127904144662194E-5 3.7127904144662194E-5 0.0 0.0 7.425580828932439E-5 8 3.7127904144662194E-5 3.7127904144662194E-5 0.0 0.0 7.425580828932439E-5 9 3.7127904144662194E-5 3.7127904144662194E-5 0.0 0.0 1.1138371243398659E-4 10-11 3.7127904144662194E-5 3.7127904144662194E-5 0.0 3.7127904144662194E-5 1.1138371243398659E-4 12-13 3.7127904144662194E-5 7.425580828932439E-5 0.0 3.7127904144662194E-5 3.1558718522962866E-4 14-15 3.7127904144662194E-5 7.425580828932439E-5 0.0 3.7127904144662194E-5 5.197906580252708E-4 16-17 3.7127904144662194E-5 7.425580828932439E-5 0.0 3.7127904144662194E-5 7.611220349655751E-4 18-19 3.7127904144662194E-5 7.425580828932439E-5 0.0 9.281976036165548E-5 7.796859870379061E-4 20-21 3.7127904144662194E-5 7.425580828932439E-5 0.0 1.1138371243398659E-4 8.168138911825683E-4 22-23 3.7127904144662194E-5 7.425580828932439E-5 0.0 1.485116165786488E-4 8.353778432548994E-4 24-25 3.7127904144662194E-5 9.281976036165548E-5 0.0 2.0420347279564207E-4 9.281976036165549E-4 26-27 3.7127904144662194E-5 1.1138371243398659E-4 0.0 3.8984299351895303E-4 9.281976036165549E-4 28-29 3.7127904144662194E-5 1.1138371243398659E-4 0.0 0.0011695289805568592 9.281976036165549E-4 30-31 3.7127904144662194E-5 1.1138371243398659E-4 0.0 0.004158325264202166 9.281976036165549E-4 32-33 3.7127904144662194E-5 1.1138371243398659E-4 0.0 0.009337667892382542 9.65325507761217E-4 34-35 3.7127904144662194E-5 1.299476645063177E-4 0.0 0.015389516267962481 0.0010024534119058794 36-37 3.7127904144662194E-5 1.8563952072331096E-4 0.0 0.025172719010080967 0.0010024534119058794 38-39 3.7127904144662194E-5 2.2276742486797318E-4 0.0 0.042047351443829935 0.0010024534119058794 40-41 1.4851161657864878E-4 2.598953290126354E-4 0.0 0.05934895477524252 0.0010024534119058794 42-43 1.4851161657864878E-4 2.9702323315729755E-4 0.0 0.07627927906520848 0.0010395813160505416 44-45 1.8563952072331096E-4 2.9702323315729755E-4 0.0 0.09404498119842933 0.0010581452681228726 46-47 2.4133137694030428E-4 2.9702323315729755E-4 0.0 0.11201488680444585 0.0010952731722675348 48-49 2.598953290126354E-4 2.9702323315729755E-4 0.0 0.13158129228868282 0.0011880929326291902 50-51 2.598953290126354E-4 2.9702323315729755E-4 0.0 0.15092493034805182 0.0012252208367738524 52-53 2.598953290126354E-4 2.9702323315729755E-4 0.0 0.17049133583228882 0.0012623487409185146 54-55 2.598953290126354E-4 3.3415113730195977E-4 0.0 0.1885726251507393 0.0012623487409185146 56-57 2.598953290126354E-4 3.3415113730195977E-4 0.0 0.2086216933888569 0.0012809126929908456 58-59 2.598953290126354E-4 3.3415113730195977E-4 0.0 0.22870788953111912 0.0012994766450631768 60-61 2.598953290126354E-4 3.3415113730195977E-4 0.0 0.24794014387805413 0.0012994766450631768 62-63 2.598953290126354E-4 3.3415113730195977E-4 0.0 0.2674322935540018 0.0013737324533525013 64-65 2.598953290126354E-4 3.71279041446622E-4 0.0 0.2881125361625786 0.0013737324533525013 66-67 2.598953290126354E-4 3.71279041446622E-4 0.0 0.3118929587672348 0.0014108603574971635 68-69 2.598953290126354E-4 3.71279041446622E-4 0.0 0.3350978988576486 0.001466552213714157 70-71 2.598953290126354E-4 3.8984299351895303E-4 0.0 0.35843278661256883 0.0015593719740758121 72-73 2.598953290126354E-4 4.0840694559128414E-4 0.0 0.3813778313739701 0.0017264475427267922 74-75 2.598953290126354E-4 4.0840694559128414E-4 0.0 0.40333898667553775 0.001874959159305441 76-77 2.598953290126354E-4 4.0840694559128414E-4 0.0 0.42767632784236387 0.001893523111377772 78-79 2.598953290126354E-4 4.0840694559128414E-4 0.0 0.45401857583300165 0.001912087063450103 80-81 2.598953290126354E-4 4.0840694559128414E-4 0.0 0.47789181819801946 0.0020049068238117587 82-83 2.598953290126354E-4 4.0840694559128414E-4 0.0 0.5030645372081004 0.002153418440390407 84-85 2.598953290126354E-4 4.0840694559128414E-4 0.0 0.5281815643619644 0.0021905463445350696 86-87 2.598953290126354E-4 4.0840694559128414E-4 0.0 0.5545980681608915 0.002227674248679732 88-89 2.598953290126354E-4 4.0840694559128414E-4 0.0 0.5817200021385673 0.002264802152824394 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 3525 0.0 32.970764 1 TACCTGG 3595 0.0 31.442343 2 GTATCAA 5095 0.0 27.57885 1 GGTATCA 3630 0.0 27.293234 1 GTACATG 8380 0.0 25.521173 1 ACCTGGG 4455 0.0 24.62778 3 TACATGG 8685 0.0 23.951965 2 TATACCG 180 1.9643267E-7 23.73586 5 ACATGGG 8475 0.0 23.36993 3 TCAACGC 5925 0.0 23.007143 4 GAGTACA 6320 0.0 22.8362 1 CAACGCA 5990 0.0 22.824469 5 ATCAACG 6225 0.0 21.745358 3 TATCAAC 6490 0.0 21.441727 2 AACGCAG 6490 0.0 21.431366 6 AGTACAT 5985 0.0 21.42577 2 CATGGGG 6320 0.0 21.043116 4 GTATAGG 535 0.0 18.69665 1 ACGCAGA 7505 0.0 18.659771 7 ATGGGGG 3170 0.0 17.670864 5 >>END_MODULE