##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921456_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5795871 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.11015755871723 31.0 31.0 34.0 26.0 34.0 2 30.197768549369027 31.0 31.0 34.0 26.0 34.0 3 30.330984247233935 31.0 31.0 34.0 26.0 34.0 4 33.81956913809849 37.0 35.0 37.0 30.0 37.0 5 33.79493815511077 37.0 35.0 37.0 30.0 37.0 6 33.89505563529623 37.0 35.0 37.0 30.0 37.0 7 33.76780263052784 37.0 35.0 37.0 29.0 37.0 8 33.74476605845782 37.0 35.0 37.0 29.0 37.0 9 35.164470534282074 39.0 35.0 39.0 29.0 39.0 10-11 35.02959123831431 39.0 35.0 39.0 28.5 39.0 12-13 34.86243948493678 39.0 35.0 39.0 27.0 39.0 14-15 35.83385413512482 39.5 36.0 41.0 27.0 41.0 16-17 35.68001375461945 39.0 36.0 41.0 27.0 41.0 18-19 35.48335789392138 39.0 36.0 41.0 27.0 41.0 20-21 35.355137044975635 39.0 36.0 40.0 26.0 41.0 22-23 35.38521345626913 39.0 36.0 41.0 26.5 41.0 24-25 35.2394051730965 39.0 35.5 41.0 25.0 41.0 26-27 34.95489418242745 39.0 35.0 40.0 24.0 41.0 28-29 34.70935101902717 39.0 34.5 40.0 23.5 41.0 30-31 34.450470602261504 38.0 34.0 40.0 22.5 41.0 32-33 34.166126885846836 38.0 34.0 40.0 19.5 41.0 34-35 33.73235170347994 38.0 33.0 40.0 16.5 41.0 36-37 33.33625368818595 38.0 33.0 40.0 15.0 41.0 38-39 33.08962915151148 38.0 32.5 40.0 10.5 41.0 40-41 32.81510509809483 38.0 32.0 40.0 9.0 41.0 42-43 32.50616292184557 38.0 31.0 40.0 8.5 41.0 44-45 32.17789862817858 37.0 31.0 40.0 7.5 41.0 46-47 31.878242372889254 37.0 31.0 40.0 6.5 41.0 48-49 31.651051153484953 37.0 30.0 40.0 2.0 41.0 50-51 30.907200315534972 36.0 29.5 38.5 2.0 39.5 52-53 31.43785921046207 36.5 30.5 39.0 2.0 40.0 54-55 31.85816523521659 37.0 31.0 39.5 2.0 40.5 56-57 31.676591145662144 36.5 31.0 40.0 2.0 41.0 58-59 31.324274815640308 36.0 30.5 39.0 2.0 41.0 60-61 30.829595499968857 35.5 30.0 39.0 2.0 40.0 62-63 30.325015860428913 35.0 29.0 39.0 2.0 40.0 64-65 29.760655387257586 35.0 28.5 38.0 2.0 40.0 66-67 29.236016812658526 34.0 28.0 37.5 2.0 40.0 68-69 28.68814040202068 34.0 26.5 37.0 2.0 39.0 70-71 28.135228337552718 34.0 26.0 36.0 2.0 39.0 72-73 27.56515043209209 33.5 26.0 35.5 2.0 38.5 74-75 26.951613226036258 33.0 24.5 35.0 2.0 37.5 76-77 26.35458967254447 32.5 23.5 35.0 2.0 37.0 78-79 25.76615602728218 32.0 20.5 35.0 2.0 36.0 80-81 25.15168522556834 31.5 19.0 34.5 2.0 36.0 82-83 24.496836886121173 31.0 15.0 34.0 2.0 35.0 84-85 23.85115619378002 31.0 7.5 34.0 2.0 35.0 86-87 23.21700103401197 30.0 2.0 34.0 2.0 35.0 88-89 22.52226110622545 30.0 2.0 34.0 2.0 35.0 90-91 21.740015348857835 29.0 2.0 34.0 2.0 35.0 92-93 20.882103052328112 29.0 2.0 34.0 2.0 35.0 94-95 19.94296991772246 27.0 2.0 33.0 2.0 34.0 96-97 19.027639331517214 25.5 2.0 33.0 2.0 34.0 98 18.400998745486227 25.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 214628.0 3 36332.0 4 27673.0 5 23603.0 6 22014.0 7 23255.0 8 26022.0 9 29889.0 10 33250.0 11 36469.0 12 39770.0 13 43722.0 14 37780.0 15 37808.0 16 41421.0 17 46592.0 18 51514.0 19 52832.0 20 56147.0 21 60979.0 22 66616.0 23 73678.0 24 81470.0 25 91708.0 26 103416.0 27 117730.0 28 134253.0 29 156512.0 30 184045.0 31 221991.0 32 272339.0 33 345985.0 34 459811.0 35 625450.0 36 811065.0 37 791107.0 38 305750.0 39 11245.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.544733976480195 16.711204130543535 13.169123680906983 24.574938212069284 2 16.12013071360646 18.656914413866236 38.486909392395084 26.73604548013222 3 20.796678867606825 22.110637777777395 27.015049744308506 30.077633610307274 4 13.91844505734761 14.432459707524698 34.34232761149082 37.30676762363687 5 15.976480203555557 35.363306721231744 32.185651563724974 16.474561511487725 6 35.66128599530335 32.482536038896356 16.45434716327815 15.401830802522145 7 32.01961804398836 29.591268886440908 19.002123435429233 19.3869896341415 8 28.421252994741263 32.61938713050333 18.57844897640809 20.380910898347313 9 27.08974743467582 16.71509776928182 18.860072191102457 37.3350826049399 10-11 27.10090047897965 24.43937707279017 25.693460962304403 22.766261485925774 12-13 27.511467587145123 21.510567194116142 26.19828801084751 24.779677207891226 14-15 24.32075555862716 23.21989721008034 24.04895338215626 28.410393849136245 16-17 24.797617291204528 26.157709507280742 24.443817476361435 24.6008557251533 18-19 24.766836730642346 25.89545122310375 25.456193133383582 23.881518912870323 20-21 25.50003617600776 24.76903043636899 25.262958133739332 24.467975253883914 22-23 25.093912390805418 24.455553373722008 25.352830980838952 25.09770325463362 24-25 25.140855198628575 24.682899912136534 25.34235932306631 24.83388556616858 26-27 25.088140213435995 24.64579436880003 25.63746998173218 24.6285954360318 28-29 24.80552942775306 25.310020982635233 25.283842334776207 24.600607254835495 30-31 25.1086458516395 24.82335446462204 25.110372170089324 24.957627513649136 32-33 24.997600978110565 24.938876719270255 25.152173928051436 24.911348374567744 34-35 25.35428310863741 24.732770413494485 25.284789255820783 24.628157222047324 36-37 25.27878372341051 24.661302221251212 25.380427126237198 24.67948692910108 38-39 25.070342132751257 24.968611515010604 25.29015695977624 24.670889392461905 40-41 25.178466599122235 24.95531666028612 25.169088801669297 24.697127938922346 42-43 25.04138655003037 24.892544141895158 24.9573558955366 25.10871341253787 44-45 25.138945361930848 24.68520994227306 25.0660875502545 25.10975714554159 46-47 25.430399206459995 24.881458892772386 25.05276538112377 24.63537651964384 48-49 25.325300114302834 24.873229970647476 24.966673232606272 24.834796682443418 50-51 24.769379336967816 25.135434659913912 25.31991905092683 24.775266952191437 52-53 25.1508979069809 25.183136784654884 24.85310266438053 24.81286264398369 54-55 24.934986180008643 24.813200217233263 25.18325152384274 25.068562078915363 56-57 25.161890574935597 24.792760552663964 25.10209891699487 24.94324995540557 58-59 25.52302147607599 24.693429903860075 24.951904028270636 24.831644591793296 60-61 25.194162125472317 24.799096209328575 25.338949682378693 24.667791982820418 62-63 24.909078673721954 25.015388420380596 25.198601245052853 24.87693166084459 64-65 24.95306709280694 25.120918805983823 25.062779593839103 24.86323450737014 66-67 25.14943601341554 24.841133411149315 24.90256662610449 25.106863949330656 68-69 24.917671354366163 24.931138781533445 25.084258138579564 25.066931725520824 70-71 25.200288593084448 24.684624340143216 25.085253531312908 25.029833535459435 72-73 25.1942200265682 24.610730178213508 25.229819918104653 24.965229877113646 74-75 24.839314193506407 25.26811003963654 24.984934961053572 24.90764080580348 76-77 25.11948098044422 24.68504092578869 24.919245484714267 25.276232609052823 78-79 25.08191138700856 24.75287941964487 25.167921376159825 24.99728781718675 80-81 25.206856368077613 24.812444420876254 25.02538129564225 24.955317915403885 82-83 25.2418710652484 24.62545788347359 25.1518261736667 24.980844877611315 84-85 25.06190121726643 24.880745940423736 25.070400180756753 24.98695266155308 86-87 25.075383876427626 24.89354767386896 25.0672572155738 24.96381123412962 88-89 24.92011536388327 24.74124588140884 24.960646980624208 25.377991774083686 90-91 25.12818077826402 24.517070350699004 24.982163779223544 25.37258509181343 92-93 25.32898860917852 24.842758767563872 24.99171479737622 24.83653782588139 94-95 25.298898216164044 24.6222878155624 25.034298871960726 25.044515096312825 96-97 24.957012229278856 24.58790443488227 25.349861317054316 25.105222018784563 98 25.18923040266857 24.885671583598672 24.728156475404507 25.196941538328243 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 687.0 1 502.5 2 594.0 3 849.0 4 646.0 5 542.0 6 902.0 7 1857.0 8 2649.0 9 2506.5 10 2058.5 11 1859.5 12 2040.0 13 2386.5 14 2770.5 15 3285.0 16 3722.5 17 3815.0 18 3764.0 19 3641.0 20 3344.0 21 3023.5 22 2804.5 23 2696.5 24 2864.0 25 3230.0 26 3763.0 27 4907.5 28 6671.0 29 9458.0 30 13491.5 31 18814.0 32 26089.5 33 34720.5 34 44710.0 35 56207.5 36 69268.5 37 83260.0 38 97702.0 39 112235.0 40 127882.5 41 144841.5 42 162551.0 43 180676.0 44 198816.5 45 219704.0 46 251382.5 47 283833.5 48 292420.5 49 281895.0 50 274991.0 51 274136.0 52 273968.5 53 274321.5 54 270898.0 55 260977.5 56 245348.0 57 228342.0 58 210366.5 59 189117.0 60 166036.0 61 141051.0 62 115145.0 63 89685.5 64 66956.5 65 50310.5 66 37889.0 67 28683.5 68 22252.0 69 17182.0 70 12946.5 71 9855.0 72 7678.5 73 5714.0 74 4194.0 75 3076.0 76 2120.5 77 1358.0 78 846.0 79 530.0 80 299.5 81 171.5 82 115.5 83 73.0 84 51.0 85 33.5 86 23.5 87 22.5 88 15.5 89 14.0 90 15.0 91 10.5 92 7.0 93 5.5 94 6.0 95 7.5 96 7.0 97 5.5 98 4.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.46489992617157977 2 0.04741306354126929 3 0.05431452839443804 4 0.05245113288408248 5 0.0628723448123673 6 0.06309664242009527 7 0.04190914532086722 8 0.01949663821020171 9 0.012025802506646543 10-11 0.014562090840186058 12-13 0.010766285170943246 14-15 0.014622478657651282 16-17 0.013561378436476588 18-19 0.054331782056570965 20-21 0.08178235851004965 22-23 0.0972071324568818 24-25 0.06780689218238294 26-27 0.08305912950788587 28-29 0.08440491515425377 30-31 0.05515995783895121 32-33 0.031798499310975004 34-35 0.39163224992412704 36-37 0.613134764386578 38-39 0.562659175816715 40-41 0.5565600062527272 42-43 0.5299117250884293 44-45 0.5149441731881197 46-47 0.5056358224674082 48-49 0.49578398138950985 50-51 0.5094920159541163 52-53 0.5899717229731304 54-55 0.5604161997394352 56-57 0.5178945494128493 58-59 0.4961463082943012 60-61 0.5088363767930653 62-63 0.5205774938745187 64-65 0.5393322246130047 66-67 0.5642292590708109 68-69 0.5194646326669452 70-71 0.4692133417048102 72-73 0.45188203809229016 74-75 0.43236814621995556 76-77 0.4471286541746702 78-79 0.4418835408862619 80-81 0.4379238254267564 82-83 0.45767926856895197 84-85 0.4240777615650866 86-87 0.42690736215488573 88-89 0.45378856775797805 90-91 0.43669018858425246 92-93 0.43204032663943004 94-95 0.4423407629327844 96-97 0.43711290330650904 98 0.43127253867451504 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 5795871.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.62699072607246 #Duplication Level Percentage of deduplicated Percentage of total 1 74.35983750078286 39.87694316046738 2 13.742039565738812 14.738884566983923 3 4.9342264905205715 7.938231547424632 4 2.2780165510886072 4.886526898362732 5 1.2406023027570265 3.32648840923476 6 0.7617784426209959 2.451113128665484 7 0.5072477067343295 1.904151764540439 8 0.36336028016734584 1.5588734699805875 9 0.27103381473661736 1.308125508239936 >10 1.4112893566285842 13.600933932076659 >50 0.09419919977290193 3.4685366935190296 >100 0.034689960120968824 3.0177300343405964 >500 9.039879894936478E-4 0.3245262357984308 >1k 6.134152699332797E-4 0.8411581888173248 >5k 1.291400568257175E-4 0.4376501872375077 >10k+ 3.2285014206429375E-5 0.32012627431052765 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 18490 0.31902021283772536 No Hit GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT 7857 0.13556202337836712 No Hit GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT 6111 0.10543712929428554 No Hit GTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT 5854 0.10100293812612461 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.4507324265843736E-5 2 0.0 0.0 0.0 0.0 3.4507324265843736E-5 3 0.0 0.0 0.0 0.0 3.4507324265843736E-5 4 0.0 1.7253662132921868E-5 0.0 0.0 3.4507324265843736E-5 5 0.0 1.7253662132921868E-5 0.0 0.0 6.901464853168747E-5 6 0.0 1.7253662132921868E-5 0.0 0.0 6.901464853168747E-5 7 0.0 1.7253662132921868E-5 0.0 0.0 6.901464853168747E-5 8 0.0 1.7253662132921868E-5 0.0 0.0 6.901464853168747E-5 9 0.0 1.7253662132921868E-5 0.0 0.0 6.901464853168747E-5 10-11 0.0 3.4507324265843736E-5 0.0 1.7253662132921868E-5 6.901464853168747E-5 12-13 0.0 3.4507324265843736E-5 0.0 3.4507324265843736E-5 1.2940246599691402E-4 14-15 0.0 4.3134155332304674E-5 0.0 3.4507324265843736E-5 1.725366213292187E-4 16-17 0.0 5.1760986398765605E-5 0.0 5.1760986398765605E-5 2.0704394559506242E-4 18-19 0.0 5.1760986398765605E-5 0.0 6.0387817465226535E-5 2.0704394559506242E-4 20-21 0.0 5.1760986398765605E-5 0.0 8.626831066460935E-5 2.0704394559506242E-4 22-23 0.0 6.0387817465226535E-5 0.0 1.5528295919629682E-4 2.4155126986090617E-4 24-25 0.0 6.901464853168747E-5 0.0 2.501781009273671E-4 2.760585941267499E-4 26-27 0.0 6.901464853168747E-5 0.0 3.3644641159197644E-4 3.019390873261327E-4 28-29 0.0 6.901464853168747E-5 0.0 7.764147959814841E-4 3.278195805255155E-4 30-31 0.0 6.901464853168747E-5 0.0 0.0020359321316847805 3.4507324265843734E-4 32-33 0.0 6.901464853168747E-5 0.0 0.004882786383616888 3.96834229057203E-4 34-35 0.0 6.901464853168747E-5 1.7253662132921868E-5 0.00850605543153048 4.313415533230467E-4 36-37 0.0 8.626831066460935E-5 1.7253662132921868E-5 0.012715948991963415 4.3996838438950764E-4 38-39 0.0 1.2077563493045307E-4 1.7253662132921868E-5 0.019962487087790602 4.917293707882732E-4 40-41 0.0 1.3802929706337495E-4 1.7253662132921868E-5 0.028123469276662642 5.003562018547342E-4 42-43 0.0 1.3802929706337495E-4 1.7253662132921868E-5 0.03624131731020239 5.003562018547342E-4 44-45 8.626831066460934E-6 1.3802929706337495E-4 1.7253662132921868E-5 0.045204594788255295 5.17609863987656E-4 46-47 1.7253662132921868E-5 1.5528295919629682E-4 1.7253662132921868E-5 0.05474586994776109 5.348635261205779E-4 48-49 1.7253662132921868E-5 1.6390979026275774E-4 1.7253662132921868E-5 0.06424401095193458 5.607440193199607E-4 50-51 1.7253662132921868E-5 1.7253662132921867E-4 1.7253662132921868E-5 0.0740440910434342 5.952513435858044E-4 52-53 1.7253662132921868E-5 1.7253662132921867E-4 1.7253662132921868E-5 0.08399945409413012 6.383854989181091E-4 54-55 1.7253662132921868E-5 2.0704394559506242E-4 1.7253662132921868E-5 0.09499866370386781 6.55639161051031E-4 56-57 1.7253662132921868E-5 2.242976077279843E-4 1.7253662132921868E-5 0.10706760036584664 6.728928231839529E-4 58-59 1.7253662132921868E-5 2.242976077279843E-4 1.7253662132921868E-5 0.11842051004930923 6.901464853168747E-4 60-61 1.7253662132921868E-5 2.501781009273671E-4 3.4507324265843736E-5 0.13010986614436382 6.987733163833356E-4 62-63 1.7253662132921868E-5 2.5880493199382804E-4 3.4507324265843736E-5 0.1420148930160799 7.160269785162575E-4 64-65 1.7253662132921868E-5 2.5880493199382804E-4 3.4507324265843736E-5 0.15398893453632767 7.419074717156403E-4 66-67 1.7253662132921868E-5 2.760585941267499E-4 3.4507324265843736E-5 0.16617864683323696 7.591611338485622E-4 68-69 1.7253662132921868E-5 2.760585941267499E-4 3.4507324265843736E-5 0.17857540307574132 7.591611338485622E-4 70-71 1.7253662132921868E-5 2.8468542519321084E-4 3.4507324265843736E-5 0.19199875221515456 7.764147959814841E-4 72-73 2.5880493199382802E-5 3.1056591839259364E-4 3.4507324265843736E-5 0.20423159866739615 8.368026134467106E-4 74-75 3.4507324265843736E-5 3.1919274945905454E-4 3.4507324265843736E-5 0.21781023076600567 8.799367687790153E-4 76-77 3.4507324265843736E-5 3.278195805255155E-4 3.4507324265843736E-5 0.23145787751314684 8.799367687790153E-4 78-79 3.4507324265843736E-5 3.278195805255155E-4 3.4507324265843736E-5 0.24682226364251375 8.799367687790153E-4 80-81 3.4507324265843736E-5 3.278195805255155E-4 3.4507324265843736E-5 0.26283366210186526 9.058172619783981E-4 82-83 3.4507324265843736E-5 3.278195805255155E-4 3.4507324265843736E-5 0.2783705848525614 9.834587415765465E-4 84-85 3.4507324265843736E-5 3.3644641159197644E-4 3.4507324265843736E-5 0.29393338809645697 0.0010179660658423903 86 3.4507324265843736E-5 3.4507324265843734E-4 3.4507324265843736E-5 0.30568313200897673 0.0010179660658423903 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 7775 0.0 32.917465 1 TACCTGG 8135 0.0 30.489885 2 GTACATG 18120 0.0 25.174881 1 TACATGG 18805 0.0 23.819754 2 ACCTGGG 10040 0.0 23.152094 3 ACATGGG 19545 0.0 21.580833 3 CATGGGG 14810 0.0 19.595877 4 GTATAGG 1335 0.0 18.619349 1 GTACCCG 1455 0.0 18.349194 1 GAGTACA 15080 0.0 18.07059 1 AGTACAT 13375 0.0 18.03051 2 TCGCGTA 360 3.088644E-9 16.544771 9 GTATATA 1230 0.0 16.466433 1 AGAGTAC 16885 0.0 16.402693 10-11 CCTGGGG 10470 0.0 15.54525 4 GTGTAGG 2040 0.0 15.343722 1 GTCTTAG 2135 0.0 15.092185 1 GTGTAGC 3120 0.0 14.901114 1 GTATAAG 1640 0.0 14.595247 1 TATAGGG 880 0.0 14.587855 2 >>END_MODULE