##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921456_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5795871 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.871740761656014 33.0 31.0 34.0 30.0 34.0 2 31.98130720990857 34.0 31.0 34.0 30.0 34.0 3 32.1079392553768 34.0 31.0 34.0 30.0 34.0 4 35.65257422050974 37.0 35.0 37.0 35.0 37.0 5 35.445580655608104 37.0 35.0 37.0 33.0 37.0 6 35.485320152915754 37.0 35.0 37.0 33.0 37.0 7 35.41337065645526 37.0 35.0 37.0 33.0 37.0 8 35.36797420094408 37.0 35.0 37.0 33.0 37.0 9 36.976890790012405 39.0 37.0 39.0 33.0 39.0 10-11 36.87948170344026 39.0 37.0 39.0 33.0 39.0 12-13 36.75886963322682 39.0 37.0 39.0 33.0 39.0 14-15 38.029848059075164 40.0 38.0 41.0 33.0 41.0 16-17 37.93656294282602 40.0 38.0 41.0 33.0 41.0 18-19 37.827294120245256 40.0 38.0 41.0 33.0 41.0 20-21 37.701849644341635 40.0 38.0 41.0 32.0 41.0 22-23 37.659695669555106 40.0 38.0 41.0 32.5 41.0 24-25 37.70919651248276 40.0 38.0 41.0 32.5 41.0 26-27 37.594119589618195 40.0 38.0 41.0 32.0 41.0 28-29 37.45644701201942 40.0 38.0 41.0 32.0 41.0 30-31 37.32076197003005 40.0 37.0 41.0 31.5 41.0 32-33 37.15445668131675 40.0 37.0 41.0 31.0 41.0 34-35 36.99481027096704 40.0 37.0 41.0 31.0 41.0 36-37 36.89135360328068 40.0 37.0 41.0 31.0 41.0 38-39 36.854251500766665 40.0 37.0 41.0 31.0 41.0 40-41 36.69460862741769 40.0 36.0 41.0 30.0 41.0 42-43 36.44791464475313 39.0 36.0 41.0 30.0 41.0 44-45 36.23174290801158 39.0 35.5 41.0 30.0 41.0 46-47 35.954769956060105 39.0 35.0 40.0 29.0 41.0 48-49 35.610404803695594 39.0 35.0 40.0 28.0 41.0 50-51 35.31183121570511 38.0 35.0 40.0 27.0 41.0 52-53 34.993219655855 38.0 34.0 40.0 26.5 41.0 54-55 34.64695936124183 38.0 34.0 40.0 26.0 41.0 56-57 34.2309454437478 37.5 33.5 40.0 25.5 41.0 58-59 33.8165212786827 37.0 33.0 40.0 24.0 41.0 60-61 33.34837550732237 36.0 32.5 39.0 23.0 40.5 62-63 32.89502587272905 36.0 32.0 39.0 22.0 40.0 64-65 32.35477765119341 35.0 31.0 38.5 20.5 40.0 66-67 31.796178607149812 35.0 31.0 38.0 18.5 40.0 68-69 31.261121926281657 35.0 30.0 37.0 17.5 39.0 70-71 30.67636469134665 34.0 30.0 36.5 12.5 39.0 72-73 30.105612340233247 34.0 29.0 36.0 8.0 38.5 74-75 29.57225505881687 34.0 29.0 35.5 7.0 37.5 76-77 28.343476243691413 32.0 27.0 34.5 7.0 36.0 78-79 29.271237230780326 33.5 29.0 35.0 6.5 36.0 80-81 29.28957131723601 34.0 29.0 35.0 2.0 36.0 82-83 28.9313832209171 34.0 29.0 35.0 2.0 36.0 84-85 28.415664185762587 33.5 28.5 35.0 2.0 35.5 86-87 27.88817841183836 33.0 27.0 35.0 2.0 35.0 88-89 27.320467450017436 33.0 26.0 35.0 2.0 35.0 90-91 26.804544476576513 32.5 25.0 34.0 2.0 35.0 92-93 26.322844573317795 32.0 25.0 34.0 2.0 35.0 94-95 25.769982889543265 32.0 23.5 34.0 2.0 35.0 96-97 24.944669489710865 31.5 19.0 34.0 2.0 35.0 98-99 23.8724516988042 31.0 4.5 34.0 2.0 35.0 100-101 20.294472306233178 25.5 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 42113.0 3 21368.0 4 12748.0 5 9660.0 6 8487.0 7 8793.0 8 10170.0 9 11964.0 10 14286.0 11 17078.0 12 19813.0 13 23057.0 14 25891.0 15 28694.0 16 32109.0 17 37463.0 18 38178.0 19 35870.0 20 37257.0 21 39239.0 22 42196.0 23 46118.0 24 52433.0 25 61131.0 26 72306.0 27 86935.0 28 105927.0 29 128897.0 30 157199.0 31 194754.0 32 248562.0 33 330014.0 34 460889.0 35 681037.0 36 1018170.0 37 1170149.0 38 453101.0 39 11815.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.765865680837955 17.20705518286984 13.568384943958684 24.45869419233352 2 16.26359523874841 19.025285414392417 38.03637106484945 26.674748282009723 3 20.791615211896453 22.349812605997403 27.299685292646437 29.558886889459714 4 14.196535867296003 14.783357482122328 34.22161631098922 36.798490339592455 5 15.987533129359482 35.38449381202832 32.23181933389822 16.39615372471398 6 35.70963912581393 32.714681019593705 16.302336148810795 15.273343705781569 7 32.00704937271668 29.62542567226564 19.04777526403637 19.31974969098132 8 28.405607217728047 32.731280287310845 18.54126604543101 20.3218464495301 9 26.97214169555064 16.69279190397978 18.863635931909407 37.47143046856017 10-11 27.065840507480516 24.493794437163725 25.711687575809623 22.728677479546135 12-13 27.45826618646456 21.552165334868267 26.307877665032347 24.681690813634834 14-15 24.249099312805193 23.25161888898327 24.09459960595583 28.404682192255713 16-17 24.703277270124996 26.22212207818702 24.584841894296343 24.489758757391638 18-19 24.717836970170314 25.903214253351685 25.615359721077546 23.763589055400455 20-21 25.389113284577608 24.74573410411009 25.435270492108835 24.42988211920347 22-23 24.988491502180445 24.45532053345577 25.542332026419057 25.01385593794473 24-25 25.073617427898586 24.66418345472525 25.49905078111752 24.76314833625864 26-27 24.97151702679522 24.649308245997627 25.83869887776568 24.54047584944147 28-29 24.700477896179937 25.303456826087345 25.45987066498877 24.536194612743945 30-31 24.97306192057248 24.823356078360867 25.291470450760123 24.91211155030653 32-33 24.89146660641371 24.894563801485152 25.342561421735045 24.871408170366088 34-35 25.206889611049 24.768267502199798 25.482400201607426 24.54244268514378 36-37 25.118118388437416 24.70127665008123 25.547772354749455 24.632832606731895 38-39 24.933123105255312 24.9849352266515 25.498906294003632 24.583035374089558 40-41 25.02554476663188 24.98778631407957 25.341452551102904 24.645216368185636 42-43 24.901133223757427 24.969770577316407 25.13439324959047 24.994702949335696 44-45 24.983276763799918 24.701770751933473 25.265895788678 25.04905669558861 46-47 25.218742061432092 24.956898753575807 25.24241970311137 24.581939481880735 48-49 25.136288247562316 24.923389488350224 25.186972266136387 24.753349997951073 50-51 24.673604227725633 25.190155426065232 25.407187509732843 24.7290528364763 52-53 25.045369623971308 25.21204411249113 24.925419205318125 24.817167058219432 54-55 24.90429858358798 24.813825244192607 25.222495224850448 25.059380947368965 56-57 25.112049167740746 24.89113424332303 25.125654152151522 24.8711624367847 58-59 25.43442196554232 24.794821426876855 24.968843844815343 24.801912762765483 60-61 25.119207285141755 24.89425125401664 25.391181930634342 24.595359530207258 62-63 24.84117902753852 25.041738229215397 25.245964355422828 24.87111838782326 64-65 24.924700068501544 25.15838177617423 25.122517681852614 24.794400473471615 66-67 25.096669841960797 24.8848186362782 24.93604679160376 25.082464730157245 68-69 24.891973333151487 25.000183428887556 25.0715868998455 25.036256338115457 70-71 25.1082556604883 24.833027577077452 25.09333812581064 24.96537863662361 72-73 25.145577456164098 24.718728019053238 25.237455710185593 24.89823881459707 74-75 24.78588231435517 25.35919320112532 24.95078773713354 24.90413674738597 76-77 25.028680587419274 24.79201977526394 25.00259356092584 25.176706076390946 78-79 24.99557559177 24.867384298487412 25.229348373155887 24.907691736586703 80-81 25.106284087387632 24.96017663718485 25.079618679489307 24.853920595938213 82-83 25.105521824124022 24.783368963182603 25.230722473935156 24.88038673875822 84-85 24.962306716764466 25.079549782485984 25.09279441789094 24.86534908285861 86-87 24.909666348482162 25.063179143403097 25.11314378381142 24.91401072430332 88-89 24.794224595610086 24.902008718295107 25.00576036716498 25.29800631892983 90-91 25.014105939144578 24.75663151900838 25.00003455220856 25.229227989638485 92-93 25.238683867060995 25.086589737521543 25.005156976642823 24.66956941877464 94-95 25.128791489270654 24.869629676154283 25.071798149364305 24.929780685210755 96-97 24.734818413484675 24.859422485189945 25.445630161173465 24.96012894015191 98-99 24.97621567924888 25.040526308387847 24.941152840931103 25.042105171432173 100-101 25.4312622186792 24.281347544530778 25.131802126848225 25.1555881099418 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 273.0 1 240.5 2 435.5 3 650.0 4 465.0 5 324.5 6 634.5 7 1568.0 8 2306.0 9 2113.0 10 1507.0 11 1074.0 12 1004.5 13 1086.5 14 1175.0 15 1244.5 16 1303.5 17 1414.5 18 1530.5 19 1567.5 20 1656.5 21 1843.5 22 1990.0 23 2202.0 24 2513.0 25 2956.5 26 3606.5 27 4523.5 28 6039.5 29 8326.5 30 11935.5 31 16716.5 32 22530.5 33 29946.5 34 38386.5 35 48274.0 36 60296.5 37 72996.0 38 86006.5 39 99880.0 40 115092.0 41 130709.5 42 146711.0 43 163710.0 44 181460.5 45 199095.0 46 217803.5 47 247630.5 48 288558.0 49 298491.5 50 278032.5 51 269075.5 52 269762.5 53 269894.0 54 267406.0 55 259310.5 56 244502.0 57 226076.0 58 207777.0 59 188377.0 60 165884.5 61 141337.0 62 115937.5 63 89395.0 64 66026.5 65 49433.0 66 37010.0 67 28479.0 68 21998.5 69 16765.0 70 12968.0 71 10175.5 72 7704.5 73 5758.5 74 4389.5 75 3231.5 76 2265.0 77 1363.5 78 806.5 79 489.5 80 278.5 81 135.0 82 69.0 83 32.0 84 20.0 85 14.5 86 9.0 87 5.0 88 2.5 89 3.0 90 1.5 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3104106354333973 2 0.0 3 0.005659201179598373 4 0.05710962165997138 5 5.176098639876561E-4 6 0.062164944664917496 7 0.07160269785162575 8 0.10188287489490364 9 0.08927044787573774 10-11 0.09423087573895278 12-13 0.09304037305178117 14-15 0.06257903255610761 16-17 0.03440380229304621 18-19 0.03702635893725033 20-21 0.026622400671098445 22-23 0.04013201812117626 24-25 0.032721570235086324 26-27 0.020376574978980728 28-29 0.02255053640772888 30-31 0.002967629886862561 32-33 0.0052537401194747094 34-35 0.007755521128748379 36-37 0.010800792495209089 38-39 0.015442027608965072 40-41 0.01970368215579677 42-43 0.00332995679165392 44-45 0.013639019916074737 46-47 0.02372378543276757 48-49 0.002734705448068116 50-51 0.007151642954096114 52-53 0.0024672736850078272 54-55 0.00415813257403417 56-57 0.0034679860887172954 58-59 0.0011387417007728432 60-61 0.005072576667079029 62-63 0.014217017597527618 64-65 0.006573645272643232 66-67 0.037647490774035515 68-69 0.059274956257653076 70-71 0.011689356095054565 72-73 0.030892682048996607 74-75 0.049233324896292556 76-77 0.2956673811408156 78-79 0.07136114658176484 80-81 0.03187614079057315 82-83 0.027122756872953176 84-85 0.018495925806492244 86-87 0.1169280682748115 88-89 0.5207068963405155 90-91 0.12990282219876872 92-93 0.04741306354126929 94-95 0.007884923594745293 96-97 0.005417649909737467 98-99 0.00968793128763563 100-101 0.007608865000618544 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 5795871.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.05353097987369 #Duplication Level Percentage of deduplicated Percentage of total 1 70.2108572137018 34.4409045945581 2 15.723198574094132 15.425568167140646 3 5.73785602434832 8.443862947452756 4 2.7069996172114847 5.311515583415592 5 1.4695628270453212 3.604362283166921 6 0.9301736354689538 2.7376980746482844 7 0.6108946791689872 2.097657874903914 8 0.4128010834738263 1.6199480589367017 9 0.3291162535667804 1.4529882906286227 >10 1.7024703242768189 15.121660674746112 >50 0.11745737943911291 3.947980423978123 >100 0.04656624562281849 3.753374881127474 >500 0.0011289123554172043 0.3617503861429141 >1k 7.408397981860516E-4 0.919232085505957 >5k 1.411123424944269E-4 0.434376486324766 >10k+ 3.5278085623606726E-5 0.32711918732309675 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 18903 0.32614597529862205 No Hit GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT 7592 0.13098980291314283 No Hit GTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT 6228 0.1074558077638374 No Hit GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT 6121 0.10560966591561474 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 1.7253662132921868E-5 3 0.0 0.0 0.0 0.0 1.7253662132921868E-5 4 0.0 0.0 0.0 0.0 1.7253662132921868E-5 5 0.0 0.0 0.0 0.0 1.7253662132921868E-5 6 0.0 0.0 0.0 0.0 1.7253662132921868E-5 7 0.0 0.0 0.0 0.0 1.7253662132921868E-5 8 0.0 0.0 0.0 0.0 1.7253662132921868E-5 9 0.0 0.0 0.0 0.0 3.4507324265843736E-5 10-11 0.0 0.0 0.0 1.7253662132921868E-5 3.4507324265843736E-5 12-13 0.0 0.0 0.0 3.4507324265843736E-5 6.901464853168747E-5 14-15 0.0 8.626831066460934E-6 0.0 4.3134155332304674E-5 6.901464853168747E-5 16-17 0.0 1.7253662132921868E-5 0.0 5.1760986398765605E-5 8.626831066460933E-5 18-19 0.0 1.7253662132921868E-5 0.0 6.0387817465226535E-5 8.626831066460933E-5 20-21 0.0 1.7253662132921868E-5 0.0 9.489514173107027E-5 1.29402465996914E-4 22-23 0.0 1.7253662132921868E-5 0.0 1.984171145286015E-4 1.552829591962968E-4 24-25 0.0 2.5880493199382802E-5 0.0 3.019390873261327E-4 1.811634523956796E-4 26-27 0.0 3.4507324265843736E-5 0.0 3.7095373585782014E-4 2.3292443879444522E-4 28-29 1.7253662132921868E-5 3.4507324265843736E-5 0.0 8.022952891808669E-4 2.5880493199382804E-4 30-31 1.7253662132921868E-5 3.4507324265843736E-5 0.0 0.0020359321316847805 3.019390873261327E-4 32-33 1.7253662132921868E-5 3.4507324265843736E-5 0.0 0.004770637579752896 3.278195805255155E-4 34-35 1.7253662132921868E-5 3.4507324265843736E-5 0.0 0.008471548107264637 3.4507324265843734E-4 36-37 1.7253662132921868E-5 3.4507324265843736E-5 0.0 0.01265556117449819 3.537000737248983E-4 38-39 1.7253662132921868E-5 6.0387817465226535E-5 0.0 0.01984171145286015 3.6232690479135924E-4 40-41 1.7253662132921868E-5 8.626831066460933E-5 0.0 0.02798543997959927 3.6232690479135924E-4 42-43 1.7253662132921868E-5 1.2077563493045307E-4 0.0 0.03606878068887316 3.8820739799074204E-4 44-45 1.7253662132921868E-5 1.3802929706337495E-4 0.0 0.045083819153324836 4.313415533230467E-4 46-47 1.7253662132921868E-5 1.3802929706337495E-4 0.0 0.054564706495365406 4.6584887758889044E-4 48-49 1.7253662132921868E-5 1.3802929706337495E-4 0.0 0.06404559383740598 4.831025397218123E-4 50-51 1.7253662132921868E-5 1.466561281298359E-4 0.0 0.07381979343570622 4.831025397218123E-4 52-53 1.7253662132921868E-5 1.5528295919629682E-4 0.0 0.08348184423014246 5.607440193199607E-4 54-55 1.7253662132921868E-5 1.725366213292187E-4 0.0 0.09408421961082294 6.125050057187263E-4 56-57 1.7253662132921868E-5 1.8979028346214054E-4 0.0 0.1058857245097415 6.211318367851873E-4 58-59 3.4507324265843736E-5 1.8979028346214054E-4 0.0 0.11711785855827364 6.211318367851873E-4 60-61 5.1760986398765605E-5 2.0704394559506242E-4 0.0 0.12848802190386915 6.211318367851873E-4 62-63 5.1760986398765605E-5 2.0704394559506242E-4 0.0 0.14003934870186036 6.728928231839529E-4 64-65 5.1760986398765605E-5 2.0704394559506242E-4 0.0 0.15182359993864597 6.901464853168747E-4 66-67 5.1760986398765605E-5 2.0704394559506242E-4 0.0 0.1637199999792956 7.074001474497966E-4 68-69 5.1760986398765605E-5 2.0704394559506242E-4 0.0 0.17574580248594213 7.246538095827185E-4 70-71 5.1760986398765605E-5 2.1567077666152334E-4 0.0 0.18878094422736463 7.246538095827185E-4 72-73 5.1760986398765605E-5 2.242976077279843E-4 0.0 0.2005997027884161 7.85041627047945E-4 74-75 5.1760986398765605E-5 2.242976077279843E-4 0.0 0.21383326164436717 8.109221202473278E-4 76-77 5.1760986398765605E-5 2.242976077279843E-4 0.0 0.22729111810804623 8.109221202473278E-4 78-79 5.1760986398765605E-5 2.242976077279843E-4 0.0 0.24210338704915965 8.281757823802497E-4 80-81 5.1760986398765605E-5 2.3292443879444522E-4 0.0 0.25758854881345705 8.454294445131716E-4 82-83 5.1760986398765605E-5 2.4155126986090614E-4 0.0 0.2725733543758997 9.316977551777809E-4 84-85 5.1760986398765605E-5 2.501781009273671E-4 0.0 0.2874805184587441 9.316977551777809E-4 86-87 5.1760986398765605E-5 2.5880493199382804E-4 0.0 0.3029052924055763 9.920855726430074E-4 88-89 5.1760986398765605E-5 2.5880493199382804E-4 0.0 0.3199950447482354 0.0010352197279753122 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 7580 0.0 34.439117 1 TACCTGG 7995 0.0 32.018383 2 GTACATG 17810 0.0 25.596977 1 TACATGG 18400 0.0 23.849718 2 ACCTGGG 10140 0.0 23.840559 3 GTATAGG 1250 0.0 22.103376 1 ACATGGG 19340 0.0 21.659515 3 CATGGGG 14810 0.0 19.626223 4 GAGTACA 15210 0.0 18.85419 1 AGTACAT 13735 0.0 18.188053 2 GTATATA 1190 0.0 17.613531 1 GTATAGC 1335 0.0 16.770935 1 CCTGGGG 11130 0.0 16.471476 4 AGAGTAC 17785 0.0 16.45608 10-11 TATAGGA 1625 0.0 16.3668 2 TATAACG 380 3.927198E-9 16.247585 2 GTATAAC 1080 0.0 15.437784 1 GTACACG 1435 0.0 14.938303 1 CGTATAC 290 1.8690414E-5 14.739444 3 CCTATAC 1160 0.0 14.739444 3 >>END_MODULE