##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921453_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5390473 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.368844811948783 31.0 31.0 34.0 27.0 34.0 2 30.46786914617697 31.0 31.0 34.0 27.0 34.0 3 30.60145334184959 31.0 31.0 34.0 27.0 34.0 4 34.12080498316196 37.0 35.0 37.0 30.0 37.0 5 34.10086925581484 37.0 35.0 37.0 30.0 37.0 6 34.202919669572594 37.0 35.0 37.0 30.0 37.0 7 34.08441114536702 37.0 35.0 37.0 30.0 37.0 8 34.06305346488147 37.0 35.0 37.0 30.0 37.0 9 35.51068765208545 39.0 35.0 39.0 30.0 39.0 10-11 35.383696477099505 39.0 35.0 39.0 30.0 39.0 12-13 35.212914525311604 39.0 35.0 39.0 29.5 39.0 14-15 36.215324146879134 40.0 36.0 41.0 29.0 41.0 16-17 36.05867221670529 39.5 36.0 41.0 28.5 41.0 18-19 35.86725506277464 39.0 36.0 41.0 27.0 41.0 20-21 35.74724778326503 39.0 36.0 40.0 27.0 41.0 22-23 35.78613425946109 39.0 36.0 41.0 27.0 41.0 24-25 35.64502113265385 39.0 36.0 41.0 27.0 41.0 26-27 35.367818927949365 39.0 35.5 40.0 26.5 41.0 28-29 35.12564194273861 39.0 35.0 40.0 25.0 41.0 30-31 34.86563229237954 38.5 34.5 40.0 24.5 41.0 32-33 34.586722723590306 38.0 34.0 40.0 24.0 41.0 34-35 34.15572260541886 38.0 33.5 40.0 21.0 41.0 36-37 33.761385318134415 38.0 33.0 40.0 18.0 41.0 38-39 33.51653788081306 38.0 33.0 40.0 16.5 41.0 40-41 33.235715400114245 38.0 32.5 40.0 15.0 41.0 42-43 32.937470700623116 38.0 32.0 40.0 14.0 41.0 44-45 32.60846923822826 37.0 31.5 40.0 9.0 41.0 46-47 32.304345926600504 37.0 31.0 40.0 8.5 41.0 48-49 32.07655571227237 37.0 31.0 40.0 8.0 41.0 50-51 31.335660432767217 36.0 30.5 38.5 7.0 40.0 52-53 31.87725566940044 36.5 31.0 39.0 7.0 40.0 54-55 32.30076599956998 37.0 32.0 39.5 4.0 40.5 56-57 32.13123644251627 37.0 31.5 40.0 2.0 41.0 58-59 31.77252330175849 36.0 31.0 39.0 2.0 41.0 60-61 31.297320940110453 35.5 30.5 39.0 2.0 40.0 62-63 30.785570858067558 35.0 30.0 39.0 2.0 40.0 64-65 30.22243864313948 35.0 29.0 38.0 2.0 40.0 66-67 29.707286355019306 34.5 28.5 37.5 2.0 40.0 68-69 29.16889835084973 34.0 28.0 37.0 2.0 39.0 70-71 28.62687838339975 34.0 27.0 36.0 2.0 39.0 72-73 28.056573514049695 34.0 26.0 36.0 2.0 38.5 74-75 27.448732884850735 33.0 26.0 35.0 2.0 37.5 76-77 26.84929161132984 33.0 25.0 35.0 2.0 37.0 78-79 26.26659794047758 32.0 23.5 35.0 2.0 36.0 80-81 25.667823862581262 32.0 21.0 34.5 2.0 36.0 82-83 25.02077313066961 31.0 19.0 34.0 2.0 35.0 84-85 24.380107181688878 31.0 16.5 34.0 2.0 35.0 86-87 23.729948559245173 31.0 7.5 34.0 2.0 35.0 88-89 23.045127857982035 30.0 2.0 34.0 2.0 35.0 90-91 22.266298337826754 29.5 2.0 34.0 2.0 35.0 92-93 21.409436889861055 29.0 2.0 34.0 2.0 35.0 94-95 20.451221256464876 28.0 2.0 33.5 2.0 34.5 96-97 19.526672241934985 27.0 2.0 33.0 2.0 34.0 98 18.88648881090769 25.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 161448.0 3 29334.0 4 22787.0 5 19450.0 6 18136.0 7 19259.0 8 21900.0 9 25859.0 10 28562.0 11 31951.0 12 35191.0 13 38434.0 14 32709.0 15 33059.0 16 37098.0 17 42131.0 18 47138.0 19 47797.0 20 50152.0 21 54855.0 22 60244.0 23 66458.0 24 74271.0 25 84002.0 26 95376.0 27 108104.0 28 124978.0 29 145427.0 30 172845.0 31 207878.0 32 257573.0 33 329800.0 34 439675.0 35 600954.0 36 780470.0 37 753467.0 38 281923.0 39 9778.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.1635318868866 16.689223710264297 13.114368777746236 25.032875625102868 2 16.318955686616896 18.323295856125537 38.46078033961121 26.89696811764636 3 20.764035024706736 21.413198247688076 27.034076011105178 30.78869071650001 4 14.184337661585566 14.114565661410348 33.675449388107545 38.02564728889655 5 16.142264843386712 35.295187762379584 32.21428644355527 16.34826095067844 6 36.38909700600937 32.17470675287047 15.92519218760094 15.511004053519226 7 32.25114720934656 29.731935802675352 18.420493404416234 19.596423583561847 8 28.548958266650708 33.311605235154246 18.259989405000805 19.879447093194244 9 27.243842832482596 16.311169064027418 18.374616127897504 38.07037197559249 10-11 27.32513755316098 24.505173672433063 25.289863791547624 22.87982498285833 12-13 27.287951160096142 21.47014159007988 26.11654673455965 25.125360515264326 14-15 24.3406595037728 23.051052874150127 23.59575651603413 29.01253110604294 16-17 24.931333839301843 26.259413041277995 24.093600648723246 24.71565247069692 18-19 24.947303435689776 25.486640427898326 25.557286121369525 24.008770015042373 20-21 25.429677364252495 24.692935081549 25.51202242533591 24.365365128862592 22-23 25.224079323532717 24.282943379198095 25.47116221157337 25.02181508569582 24-25 24.965289374028043 24.523625781302357 25.54408755375993 24.966997290909667 26-27 24.938068785888262 24.706246818029733 25.549916874218088 24.80576752186392 28-29 24.936236858266327 24.891823380298298 25.410283892547973 24.761655868887402 30-31 25.07564026935732 24.790481094387548 25.263877808388624 24.870000827866505 32-33 24.93284937624243 24.85148364185938 25.212382289234075 25.003284692664113 34-35 25.05758956742263 24.776616922094654 25.387490994645585 24.77830251583713 36-37 25.188820927438886 24.715030162625226 25.270315552489876 24.825833357446008 38-39 25.089082096399444 24.808777274468014 25.2683891148885 24.83375151424404 40-41 25.186290121711973 24.7642209528927 25.27532354376155 24.77416538163378 42-43 25.145024657059505 24.636858967513785 25.197232694243414 25.020883681183292 44-45 25.053108945745233 24.774215879588766 25.212086105961273 24.960589068704728 46-47 25.175878183478336 24.73032851013489 25.224119802569263 24.869673503817513 48-49 25.17849243429624 24.850440946210576 25.050312943853765 24.920753675639418 50-51 24.946332247468316 25.035331717201174 25.09261026540117 24.92572576992933 52-53 25.095686669376022 24.97260862647461 25.029794330235305 24.901910373914063 54-55 25.04079818442132 24.802385470519468 25.185715350556524 24.97110099450268 56-57 25.02950658059458 24.90324629735192 25.16235962751911 24.904887494534396 58-59 25.11495183024197 24.8246448519853 25.128367538572725 24.9320357792 60-61 25.129260766042773 24.745720958612687 25.202884296928847 24.9221339784157 62-63 24.93047069548701 24.929622094801566 25.14813210866266 24.99177510104876 64-65 25.01382498966798 24.823833396119788 25.172832190787748 24.98950942342448 66-67 25.065231791168706 24.833571235317716 25.06918749475216 25.03200947876142 68-69 24.92269898100108 24.882031902907794 25.148088404875125 25.047180711216 70-71 24.958223854153648 24.698968954747734 25.228458127714724 25.11434906338389 72-73 25.072702557707988 24.731981101947778 25.105700251410557 25.089616088933674 74-75 24.871001541590044 25.022635640078512 25.06287574277416 25.04348707555729 76-77 25.063255021940428 24.73857712565341 25.047097071357477 25.15107078104868 78-79 24.991464908661477 24.74290366789028 25.154265253494074 25.11136616995417 80-81 24.968555738686003 24.86590474916196 25.109790530299463 25.055748981852567 82-83 25.09907332749573 24.751510563037698 25.04520785548695 25.104208253979614 84-85 25.08333588752941 24.79786837508691 24.987509282445426 25.13128645493825 86-87 25.003668356703834 24.747707894275678 25.201186656330364 25.047437092690128 88-89 24.95409041239325 24.642149371989643 25.071732274556574 25.33202794106053 90-91 25.00497082818004 24.611963269353293 25.092367957193666 25.290697945273 92-93 25.06496924715985 24.75944864301317 25.110482425717322 25.06509968410966 94-95 25.1801451037794 24.604998321382052 25.048483313009463 25.166373261829083 96-97 25.08299272671673 24.57396259441008 25.097928575707932 25.245116103165255 98 25.071409977402602 24.649462680565364 24.971774215338094 25.307353126693943 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 783.0 1 577.0 2 549.0 3 778.5 4 734.5 5 704.5 6 1222.0 7 2632.0 8 3833.0 9 3663.5 10 2831.5 11 2363.5 12 2477.0 13 2823.5 14 3237.5 15 3696.5 16 4028.0 17 4173.5 18 4182.5 19 4023.5 20 3718.5 21 3359.0 22 3045.0 23 2904.0 24 2963.5 25 3179.0 26 3616.0 27 4355.0 28 5503.0 29 7240.5 30 9906.0 31 13947.0 32 19714.0 33 26932.0 34 35720.0 35 46712.0 36 59446.5 37 73516.0 38 88448.5 39 103752.0 40 119123.0 41 135821.0 42 154681.0 43 172150.5 44 188029.5 45 207128.0 46 228023.0 47 246411.5 48 256570.0 49 258339.0 50 258377.0 51 258903.0 52 261235.0 53 263806.5 54 260134.5 55 249472.5 56 233756.0 57 217015.0 58 199908.0 59 180130.5 60 158273.5 61 133013.0 62 107532.0 63 83788.5 64 62496.5 65 46669.5 66 35594.5 67 27133.0 68 20740.0 69 15660.0 70 11732.5 71 8856.0 72 6572.0 73 4678.0 74 3428.5 75 2480.0 76 1635.5 77 993.0 78 591.0 79 355.5 80 214.0 81 126.0 82 91.5 83 67.5 84 39.5 85 30.5 86 21.5 87 16.0 88 19.5 89 15.5 90 13.0 91 11.5 92 10.0 93 9.5 94 5.0 95 6.0 96 8.0 97 5.5 98 2.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.47409568696476173 2 0.04943907519803921 3 0.05706363801469742 4 0.05426239960760401 5 0.06452123960179376 6 0.06583837819055953 7 0.04448589205437074 8 0.021111319915710552 9 0.01218816975801567 10-11 0.015388259991284625 12-13 0.01146467109658095 14-15 0.0156758043310856 16-17 0.015017235036702716 18-19 0.05611752438051355 20-21 0.08534501517770333 22-23 0.10088168515082072 24-25 0.0703834338841879 26-27 0.08643026316985541 28-29 0.08757116490519477 30-31 0.05808395663979766 32-33 0.03415284706926461 34-35 0.3978315075504506 36-37 0.6247689210204745 38-39 0.5741703928393669 40-41 0.5693006903104793 42-43 0.5422436954975937 44-45 0.5265215130471853 46-47 0.5172737160542312 48-49 0.5062728261508777 50-51 0.5209468631045922 52-53 0.6027393143421736 54-55 0.5724822292960191 56-57 0.5293320270781433 58-59 0.5075064841248625 60-61 0.5204923575352293 62-63 0.532513566063683 64-65 0.5511482944075594 66-67 0.5773704830726357 68-69 0.5313448374567501 70-71 0.47989295188010406 72-73 0.46278870147387813 74-75 0.44404266564362715 76-77 0.45809523579841693 78-79 0.4524834833603656 80-81 0.44952455934757485 82-83 0.46851176139830397 84-85 0.4357224310371279 86-87 0.43833815696693035 88-89 0.4644490381456321 90-91 0.4482723501258609 92-93 0.4432913401105988 94-95 0.45360583384797587 96-97 0.4487454069429529 98 0.4438571531663362 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 5390473.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.715087004135064 #Duplication Level Percentage of deduplicated Percentage of total 1 70.86091085751636 35.228563484736846 2 14.801359999588875 14.717018003181709 3 5.673336680326961 8.461512799986169 4 2.742773179385587 5.4542882898305045 5 1.5407760701117068 3.8299908189746406 6 0.964680753374212 2.877551255112811 7 0.6362598038520825 2.2142198054018136 8 0.47748951535424144 1.899074623951872 9 0.3562679070492306 1.5940700996160244 >10 1.7934444928768971 16.019820012733295 >50 0.11038735850064123 3.7340577245817075 >100 0.0410387257312972 3.2759382477779706 >500 0.0010122291630639613 0.31819033157288124 >1k 2.249375733124499E-4 0.24881710035698332 >5k 3.7489595549175465E-5 0.1268874021848005 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6808 0.1262968945396814 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.275623864547693E-5 2 0.0 0.0 0.0 0.0 9.275623864547693E-5 3 0.0 0.0 0.0 0.0 9.275623864547693E-5 4 0.0 0.0 0.0 3.7102495458190776E-5 9.275623864547693E-5 5 0.0 0.0 0.0 3.7102495458190776E-5 9.275623864547693E-5 6 0.0 0.0 0.0 3.7102495458190776E-5 9.275623864547693E-5 7 0.0 0.0 0.0 3.7102495458190776E-5 9.275623864547693E-5 8 0.0 0.0 0.0 3.7102495458190776E-5 9.275623864547693E-5 9 0.0 0.0 0.0 9.275623864547693E-5 1.1130748637457233E-4 10-11 0.0 0.0 0.0 1.0203186251002462E-4 1.1130748637457233E-4 12-13 0.0 0.0 0.0 1.6696122956185848E-4 1.8551247729095387E-4 14-15 0.0 0.0 0.0 1.6696122956185848E-4 2.0406372502004925E-4 16-17 0.0 0.0 0.0 1.7623685342640618E-4 2.4116622047824006E-4 18-19 0.0 0.0 0.0 1.8551247729095387E-4 2.782687159364308E-4 20-21 0.0 0.0 0.0 1.8551247729095387E-4 2.875443398009785E-4 22-23 0.0 0.0 0.0 2.2261497274914466E-4 3.3392245912371697E-4 24-25 0.0 0.0 0.0 2.4116622047824006E-4 3.7102495458190773E-4 26-27 0.0 0.0 0.0 3.895762023110031E-4 3.803005784464554E-4 28-29 0.0 0.0 0.0 8.904598909965786E-4 3.895762023110031E-4 30-31 0.0 0.0 0.0 0.0032371927287271453 3.988518261755508E-4 32-33 0.0 0.0 0.0 0.007772972798490967 4.2667869776919393E-4 34-35 0.0 0.0 0.0 0.013774301438853324 4.637811932273847E-4 36-37 0.0 0.0 0.0 0.02360646273527388 4.637811932273847E-4 38-39 0.0 0.0 0.0 0.03859587090038295 5.008836886855755E-4 40-41 0.0 0.0 0.0 0.05459632206672772 5.379861841437663E-4 42-43 0.0 0.0 0.0 0.07008661392052237 5.565374318728617E-4 44-45 0.0 0.0 0.0 0.08778450425407938 5.843643034665047E-4 46-47 0.0 0.0 0.0 0.10581631704676009 6.121911750601478E-4 48-49 0.0 0.0 0.0 0.12371827110533715 6.121911750601478E-4 50-51 0.0 0.0 9.275623864547694E-6 0.14235299944921345 6.121911750601478E-4 52-53 0.0 0.0 1.8551247729095388E-5 0.1601343703975514 6.307424227892432E-4 54-55 0.0 3.7102495458190776E-5 1.8551247729095388E-5 0.17824038818114848 6.678449182474339E-4 56-57 0.0 3.7102495458190776E-5 1.8551247729095388E-5 0.19857255569223703 6.678449182474339E-4 58-59 0.0 3.7102495458190776E-5 2.7826871593643082E-5 0.21977663184659307 6.771205421119816E-4 60-61 0.0 5.5653743187286164E-5 3.7102495458190776E-5 0.2405169268077217 6.863961659765293E-4 62-63 0.0 5.5653743187286164E-5 3.7102495458190776E-5 0.2613407023836313 7.234986614347201E-4 64-65 0.0 5.5653743187286164E-5 3.7102495458190776E-5 0.28181200425268804 7.234986614347201E-4 66-67 1.8551247729095388E-5 5.5653743187286164E-5 3.7102495458190776E-5 0.30392509154576974 7.234986614347201E-4 68-69 1.8551247729095388E-5 5.5653743187286164E-5 3.7102495458190776E-5 0.3270677730878162 7.234986614347201E-4 70-71 1.8551247729095388E-5 5.5653743187286164E-5 3.7102495458190776E-5 0.34964464157412534 7.327742852992678E-4 72-73 1.8551247729095388E-5 5.5653743187286164E-5 3.7102495458190776E-5 0.3734087899150965 7.698767807574585E-4 74-75 1.8551247729095388E-5 5.5653743187286164E-5 3.7102495458190776E-5 0.3968946695401313 7.884280284865539E-4 76-77 1.8551247729095388E-5 6.492936705183386E-5 3.7102495458190776E-5 0.4207608497436125 8.069792762156493E-4 78-79 1.8551247729095388E-5 7.420499091638155E-5 3.7102495458190776E-5 0.44751174896896806 8.162549000801971E-4 80-81 1.8551247729095388E-5 7.420499091638155E-5 3.7102495458190776E-5 0.4741884432034072 8.255305239447448E-4 82-83 1.8551247729095388E-5 7.420499091638155E-5 3.7102495458190776E-5 0.5009207911810336 8.811842671320309E-4 84-85 1.8551247729095388E-5 9.275623864547693E-5 3.7102495458190776E-5 0.5283024328291784 8.904598909965786E-4 86 1.8551247729095388E-5 9.275623864547693E-5 3.7102495458190776E-5 0.5486160490925379 8.904598909965786E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 12490 0.0 33.170235 1 TCAACGC 15130 0.0 26.966816 4 TATCAAC 15290 0.0 26.774576 2 GGTATCA 8305 0.0 26.49456 1 CAACGCA 15590 0.0 26.082914 5 ATCAACG 15930 0.0 25.61255 3 GTACATG 18155 0.0 25.3555 1 AACGCAG 16490 0.0 24.680962 6 TACATGG 18835 0.0 23.877125 2 ACATGGG 19510 0.0 22.440096 3 ACGCAGA 19080 0.0 21.277487 7 CGCAGAG 20115 0.0 20.156338 8 CATGGGG 15505 0.0 19.188965 4 GAGTACA 14395 0.0 19.155064 1 GTACCTG 4955 0.0 18.859093 1 AGTACAT 13450 0.0 18.405603 2 AGAGTAC 16365 0.0 18.196835 10-11 GCAGAGT 22285 0.0 17.906307 9 GTATATA 890 0.0 17.068382 1 TCGCGTA 385 4.2018655E-10 16.659725 9 >>END_MODULE