##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921453_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5390473 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.992581727058088 33.0 31.0 34.0 30.0 34.0 2 32.10792244020144 34.0 31.0 34.0 30.0 34.0 3 32.234294467294426 34.0 31.0 34.0 30.0 34.0 4 35.772405872360366 37.0 35.0 37.0 35.0 37.0 5 35.586363756946746 37.0 35.0 37.0 33.0 37.0 6 35.62429697727825 37.0 35.0 37.0 35.0 37.0 7 35.555661441955095 37.0 35.0 37.0 33.0 37.0 8 35.50576025517612 37.0 35.0 37.0 33.0 37.0 9 37.13729592931826 39.0 37.0 39.0 34.0 39.0 10-11 37.05332537608481 39.0 37.0 39.0 33.5 39.0 12-13 36.93754128812073 39.0 37.0 39.0 33.0 39.0 14-15 38.24664663008237 40.0 38.0 41.0 33.0 41.0 16-17 38.151632426319544 40.0 38.0 41.0 33.0 41.0 18-19 38.040043888541874 40.0 38.0 41.0 33.0 41.0 20-21 37.92457340942066 40.0 38.0 41.0 33.0 41.0 22-23 37.89511180187713 40.0 38.0 41.0 33.0 41.0 24-25 37.95186702539833 40.0 38.0 41.0 33.0 41.0 26-27 37.85194638763611 40.0 38.0 41.0 33.0 41.0 28-29 37.720067700923465 40.0 38.0 41.0 33.0 41.0 30-31 37.58871791028356 40.0 38.0 41.0 32.0 41.0 32-33 37.436227674269034 40.0 37.0 41.0 32.0 41.0 34-35 37.299300822024335 40.0 37.0 41.0 32.0 41.0 36-37 37.21082231559271 40.0 37.0 41.0 31.5 41.0 38-39 37.187182460611524 40.0 37.0 41.0 31.0 41.0 40-41 37.02852968561386 40.0 37.0 41.0 31.0 41.0 42-43 36.801309272859726 40.0 36.0 41.0 31.0 41.0 44-45 36.60485220870228 39.0 36.0 41.0 30.0 41.0 46-47 36.349287066274144 39.0 35.5 40.5 30.0 41.0 48-49 36.029989297785185 39.0 35.0 40.0 29.5 41.0 50-51 35.75370871906788 38.5 35.0 40.0 28.5 41.0 52-53 35.435597673896154 38.0 35.0 40.0 28.0 41.0 54-55 35.10213899596566 38.0 34.0 40.0 27.5 41.0 56-57 34.71603169146752 38.0 34.0 40.0 26.5 41.0 58-59 34.31972583853031 37.0 33.5 40.0 26.0 41.0 60-61 33.886457923080215 36.5 33.0 39.0 26.0 41.0 62-63 33.435145579989 36.0 32.5 39.0 24.5 40.0 64-65 32.914967387834054 35.0 32.0 38.5 23.0 40.0 66-67 32.38068301241839 35.0 31.0 38.0 22.0 40.0 68-69 31.876586989676046 35.0 31.0 37.0 20.5 39.5 70-71 31.3237626827924 34.5 30.5 36.5 19.5 39.0 72-73 30.780127736471364 34.0 30.0 36.0 18.0 39.0 74-75 30.264181640460865 34.0 29.5 35.5 16.0 37.5 76-77 28.978066488784936 32.5 28.0 34.5 13.0 36.0 78-79 29.929820908109548 34.0 29.5 35.0 14.0 36.5 80-81 29.97306303175992 34.0 30.0 35.0 14.0 36.0 82-83 29.651854020973673 34.0 30.0 35.0 8.5 36.0 84-85 29.171182751495092 34.0 29.0 35.0 6.0 35.5 86-87 28.662069451048172 33.5 29.0 35.0 2.0 35.0 88-89 28.129972174983532 33.0 27.5 35.0 2.0 35.0 90-91 27.661233995606693 33.0 27.0 35.0 2.0 35.0 92-93 27.22759301456477 33.0 26.0 34.0 2.0 35.0 94-95 26.729212074710325 32.0 25.0 34.0 2.0 35.0 96-97 25.954683661341036 32.0 24.5 34.0 2.0 35.0 98-99 24.941531754263494 32.0 20.5 34.0 2.0 35.0 100-101 21.322124885886637 27.5 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 30536.0 3 16242.0 4 9883.0 5 7628.0 6 6553.0 7 6860.0 8 7854.0 9 9467.0 10 11295.0 11 13428.0 12 15613.0 13 17815.0 14 20191.0 15 22832.0 16 25257.0 17 28808.0 18 30147.0 19 28414.0 20 29447.0 21 31111.0 22 33873.0 23 37284.0 24 42971.0 25 50928.0 26 60906.0 27 74192.0 28 90057.0 29 110431.0 30 136312.0 31 170690.0 32 220137.0 33 296487.0 34 420242.0 35 637400.0 36 986468.0 37 1176209.0 38 464949.0 39 11556.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.55548155149482 17.118404698246735 13.408121477324517 24.917992272933922 2 16.48738431673807 18.585641742385132 38.09313208692447 26.833841853952332 3 20.79945411061718 21.51851272600913 27.275211623970826 30.406821539402866 4 14.474180502230794 14.393732398496917 33.64096905996372 37.49111803930857 5 16.192358708456624 35.274068027715686 32.31247855002829 16.221094713799406 6 36.49954881763489 32.24120779133749 15.79238520003037 15.466858190997254 7 32.36965105373025 29.603158925795913 18.48260838246335 19.54458163801048 8 28.550705932057813 33.41591260463626 18.232667406413512 19.800714056892414 9 27.088045506478498 16.389811697522443 18.485187165149828 38.03695563084923 10-11 27.36092622907212 24.50111096348402 25.37731023628598 22.760652571157884 12-13 27.281674287652386 21.40826791454679 26.22486892180004 25.08518887600078 14-15 24.302409256886754 23.086591739316756 23.565786697726907 29.045212306069583 16-17 24.932773149790886 26.26095115646885 24.22645974591684 24.579815947823427 18-19 24.94396931895105 25.556272638571137 25.550640108716177 23.949117933761634 20-21 25.44629312413259 24.692288264876762 25.528499277495126 24.33291933349552 22-23 25.256474238065923 24.297854389334546 25.48938293069456 24.95628844190497 24-25 24.954303853693645 24.55292749940685 25.53373256626718 24.95903608063232 26-27 24.918075920411386 24.786221780481785 25.55200932367974 24.743692975427088 28-29 24.95399815909136 24.923140069470595 25.462034019420187 24.660827752017862 30-31 25.07654944328774 24.77250368114469 25.28896777122342 24.86197910434415 32-33 24.920071782802296 24.778405940169744 25.301990724189626 24.999531552838334 34-35 25.029512839175016 24.750107930813705 25.471096898030382 24.749282331980897 36-37 25.06357927648152 24.78604292138044 25.34676506136589 24.803612740772156 38-39 25.08258225314871 24.841034902882416 25.3111973529149 24.765185491053973 40-41 25.119985482619406 24.786933689489114 25.30337317572525 24.789707652166232 42-43 25.131286731483083 24.725836275191313 25.20144978916762 24.941427204157986 44-45 25.02197937681822 24.737010506035435 25.289990011524736 24.95102010562161 46-47 25.046663367433453 24.770839677120485 25.331969105965324 24.85052784948074 48-49 25.135717584611477 24.832053402301288 25.157729226014848 24.874499787072384 50-51 24.934720750262635 25.078975624349216 25.134429012381464 24.851874613006686 52-53 25.09452076395781 24.971940597549324 25.0650236070014 24.868515031491462 54-55 25.044592025520117 24.818424722752113 25.18234982280531 24.95463342892246 56-57 25.078687934578536 24.894439620947335 25.15888784998182 24.86798459449231 58-59 25.14702024742441 24.86206068773196 25.093313797418897 24.897605267424726 60-61 25.16885777803256 24.807682924544178 25.184348891791696 24.83911040563157 62-63 24.984519104237105 24.932855818242455 25.145065850048447 24.937559227471993 64-65 25.051239540014336 24.821244852507583 25.196941183826087 24.930574423651997 66-67 25.089243377617105 24.868062701882117 25.06376250265619 24.978931417844592 68-69 24.9988351848789 24.94037167533456 25.085931799192927 24.974861340593613 70-71 25.002553422184075 24.778789220541555 25.191233000029406 25.02742435724496 72-73 25.128118861048566 24.808517603167786 25.04993740658773 25.01342612919592 74-75 24.947368450359203 25.03698013091138 25.037574077427056 24.978077341302363 76-77 25.06728235123476 24.851202895027438 25.0385337820343 25.0429809717035 78-79 24.991074858130624 24.84640680193277 25.187149503691565 24.975368836245043 80-81 24.941207297987162 25.006316532948546 25.100152886541892 24.952323282522396 82-83 25.10508544524831 24.900082539300804 25.042828396191613 24.95200361925927 84-85 25.03570647611338 24.92324557232738 25.025343596264428 25.015704355294815 86-87 24.98489540450692 24.91338886574471 25.163401727635122 24.938314002113252 88-89 24.947889596251372 24.79696197791455 25.12579321853286 25.129355207301217 90-91 24.976954433539746 24.84679400296079 25.08897562329376 25.087275940205707 92-93 25.045933735708438 25.014381697442122 25.088315547109097 24.851369019740346 94-95 25.10718836432504 24.892839464761327 24.99136370686399 25.008608464049644 96-97 25.01407883162441 24.855253099406895 25.078677733572942 25.051990335395757 98-99 25.012147623824593 24.912897965711327 25.01696214598188 25.057992264482206 100-101 25.52764681463891 24.381366721783273 25.071596704135136 25.019389759442678 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 300.0 1 251.5 2 368.0 3 601.0 4 519.0 5 436.5 6 937.0 7 2256.5 8 3342.5 9 3120.0 10 2080.0 11 1295.5 12 1121.5 13 1115.0 14 1170.5 15 1247.0 16 1307.0 17 1351.0 18 1388.5 19 1441.0 20 1513.0 21 1604.0 22 1658.5 23 1753.0 24 1890.5 25 2121.0 26 2464.5 27 2964.5 28 3854.5 29 5192.5 30 7469.5 31 10860.5 32 15565.5 33 21630.5 34 28990.5 35 38181.5 36 49792.0 37 63272.0 38 77242.5 39 91432.0 40 107402.0 41 123011.0 42 139845.5 43 158913.0 44 176220.0 45 193175.5 46 210509.5 47 228300.5 48 248004.0 49 258429.0 50 256777.5 51 256198.0 52 258359.0 53 259291.0 54 257272.5 55 249610.5 56 234006.5 57 214005.5 58 196039.5 59 178163.0 60 155971.0 61 133116.5 62 109654.0 63 83845.0 64 61867.0 65 46539.0 66 35246.5 67 27085.0 68 20932.5 69 15790.0 70 11739.0 71 9052.5 72 6622.5 73 4657.0 74 3436.5 75 2473.0 76 1689.0 77 990.0 78 559.0 79 323.5 80 174.0 81 93.5 82 58.5 83 33.0 84 18.0 85 11.0 86 5.0 87 2.5 88 2.5 89 1.0 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3134047791353375 2 0.0 3 0.006863961659765293 4 0.05841787909892138 5 4.266786977691939E-4 6 0.06522618701549938 7 0.07578184697335466 8 0.1066325719468403 9 0.09353539105009895 10-11 0.09799696612894637 12-13 0.09708795499022072 14-15 0.06532821887800941 16-17 0.03712104670591987 18-19 0.039523433286837724 20-21 0.0293480739074289 22-23 0.04285338225421034 24-25 0.03505258258412573 26-27 0.021973952935113485 28-29 0.023866180203481215 30-31 0.0030795071230298346 32-33 0.006010604264226905 34-35 0.008273856487176543 36-37 0.01017535937940882 38-39 0.015703631202679244 40-41 0.01986838631786116 42-43 0.003190814609404407 44-45 0.01412677514570614 46-47 0.02489577445244601 48-49 0.002662104049125188 50-51 0.006687724806338887 52-53 0.0022818034706787328 54-55 0.003997793885620056 56-57 0.0035803908117154094 58-59 0.001094523616016628 60-61 0.005305656850521281 62-63 0.014200980136622519 64-65 0.0064651098335897425 66-67 0.03929154269022403 68-69 0.06218378238792774 70-71 0.012011932904589262 72-73 0.03203800482814773 74-75 0.05161884680620791 76-77 0.3022462036262866 78-79 0.07427919590729792 80-81 0.03406936645448368 82-83 0.028290652786870468 84-85 0.019376778253040135 86-87 0.11780042307975572 88-89 0.5250003107333995 90-91 0.13201995446410733 92-93 0.047277854837599595 94-95 0.007958485275781921 96-97 0.005352034969844019 98-99 0.009832161296420555 100-101 0.007151505999566272 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 5390473.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.28030585685373 #Duplication Level Percentage of deduplicated Percentage of total 1 66.6551263314633 30.181645072158826 2 16.384740022458278 14.838120792038865 3 6.581072235132337 8.939788910185207 4 3.217105857584907 5.8268614882128125 5 1.8972193945402247 4.295333723116811 6 1.158677376681937 3.147915960334501 7 0.7939752302219926 2.516600888705237 8 0.5367656806979344 1.9443931356371804 9 0.40895208410591705 1.6665727904202325 >10 2.1703610965599647 17.634048089995822 >50 0.14152367150235867 4.389211423737782 >100 0.052964529511388615 3.919309342313315 >500 0.0011886018724294551 0.3419994754912494 >1k 2.8690170864442086E-4 0.2533615609231673 >5k 4.098595837169748E-5 0.10483734672892156 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5649 0.10479599842165985 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.7102495458190776E-5 2 0.0 0.0 0.0 0.0 3.7102495458190776E-5 3 0.0 0.0 0.0 0.0 3.7102495458190776E-5 4 0.0 0.0 0.0 0.0 3.7102495458190776E-5 5 0.0 0.0 0.0 0.0 3.7102495458190776E-5 6 0.0 0.0 0.0 0.0 5.5653743187286164E-5 7 0.0 0.0 0.0 0.0 5.5653743187286164E-5 8 0.0 0.0 0.0 0.0 5.5653743187286164E-5 9 0.0 0.0 0.0 1.8551247729095388E-5 9.275623864547693E-5 10-11 0.0 0.0 0.0 4.6378119322738466E-5 1.1130748637457233E-4 12-13 0.0 0.0 0.0 5.5653743187286164E-5 1.6696122956185848E-4 14-15 0.0 0.0 0.0 5.5653743187286164E-5 1.9478810115550156E-4 16-17 0.0 0.0 0.0 1.0203186251002464E-4 2.0406372502004927E-4 18-19 0.0 0.0 0.0 1.2985873410366772E-4 2.6899309207188314E-4 20-21 0.0 0.0 0.0 1.2985873410366772E-4 2.782687159364308E-4 22-23 0.0 0.0 0.0 1.6696122956185848E-4 2.968199636655262E-4 24-25 0.0 0.0 0.0 1.7623685342640618E-4 3.153712113946216E-4 26-27 0.0 0.0 0.0 3.3392245912371697E-4 3.246468352591693E-4 28-29 0.0 0.0 0.0 8.997355148611263E-4 3.5247370685281235E-4 30-31 0.0 0.0 0.0 0.00321864148099805 3.5247370685281235E-4 32-33 0.0 0.0 0.0 0.007698767807574586 3.895762023110031E-4 34-35 0.0 0.0 0.0 0.013727923319530586 4.452299454982893E-4 36-37 0.0 0.0 0.0 0.023541533368222047 4.452299454982893E-4 38-39 0.0 0.0 0.0 0.03866080026743479 4.8233244095648013E-4 40-41 0.0 0.0 0.0 0.05467052705764411 5.194349364146709E-4 42-43 0.0 0.0 0.0 0.07026285077394878 5.287105602792186E-4 44-45 0.0 0.0 0.0 0.08785870924499575 5.379861841437663E-4 46-47 0.0 0.0 0.0 0.10582559267062464 5.47261808008314E-4 48-49 0.0 0.0 0.0 0.1236718929860144 5.936399273310524E-4 50-51 0.0 0.0 0.0 0.14211183322873522 6.121911750601478E-4 52-53 0.0 0.0 0.0 0.15946652547930396 6.214667989246955E-4 54-55 0.0 0.0 0.0 0.1773499282901519 6.307424227892432E-4 56-57 0.0 0.0 0.0 0.19749658332394948 6.307424227892432E-4 58-59 0.0 0.0 0.0 0.21841311513850453 6.678449182474339E-4 60-61 0.0 0.0 0.0 0.2387823851450513 6.95671789841077E-4 62-63 0.0 0.0 0.0 0.2593649945004826 7.977036523511016E-4 64-65 0.0 0.0 0.0 0.2796693351399775 8.255305239447448E-4 66-67 0.0 1.8551247729095388E-5 0.0 0.3013650193591546 8.533573955383879E-4 68-69 0.0 1.8551247729095388E-5 0.0 0.3241274003227546 8.719086432674832E-4 70-71 0.0 1.8551247729095388E-5 0.0 0.34615700700105534 8.719086432674832E-4 72-73 0.0 1.8551247729095388E-5 0.0 0.36968926474541286 0.001001767377371151 74-75 0.0 1.8551247729095388E-5 0.0 0.39270208755335567 0.001029594248964794 76-77 0.0 1.8551247729095388E-5 0.0 0.41638275527954594 0.0010574211205584372 78-79 0.0 1.8551247729095388E-5 0.0 0.4427162514309969 0.0010574211205584372 80-81 0.0 1.8551247729095388E-5 0.0 0.4693094650506551 0.0011037992398811756 82-83 0.0 1.8551247729095388E-5 0.0 0.4958748517987197 0.0012058311023912002 84-85 0.0 3.7102495458190776E-5 0.0 0.5226999560149916 0.001242933597849391 86-87 0.0 3.7102495458190776E-5 0.0 0.5494044771210245 0.0012800360933075817 88-89 9.275623864547694E-6 3.7102495458190776E-5 0.0 0.5777229567794886 0.0013171385887657725 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10990 0.0 34.278065 1 TCAACGC 13570 0.0 27.40639 4 CAACGCA 13845 0.0 26.81426 5 TATCAAC 14040 0.0 26.657095 2 ATCAACG 14265 0.0 26.070887 3 GTACATG 18435 0.0 25.808329 1 AACGCAG 14775 0.0 25.351377 6 TACATGG 18910 0.0 24.714811 2 GGTATCA 7355 0.0 22.922295 1 ACATGGG 19880 0.0 22.721132 3 GAGTACA 14180 0.0 21.49519 1 ACGCAGA 17460 0.0 21.290295 7 CATGGGG 15400 0.0 20.541084 4 AGTACAT 13715 0.0 20.431955 2 CGCAGAG 18605 0.0 19.877966 8 GTACCTG 5190 0.0 19.545633 1 AGAGTAC 15080 0.0 18.13281 10-11 GTGTAGC 3075 0.0 17.191565 1 GCAGAGT 21040 0.0 17.05784 9 TACCTGG 5635 0.0 16.26736 2 >>END_MODULE