##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921452_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4265009 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.086728304676498 31.0 31.0 34.0 26.0 34.0 2 30.178615566813576 31.0 31.0 34.0 26.0 34.0 3 30.31053533532989 31.0 31.0 34.0 26.0 34.0 4 33.8082705100974 37.0 35.0 37.0 30.0 37.0 5 33.78271980199807 37.0 35.0 37.0 29.0 37.0 6 33.880210100377276 37.0 35.0 37.0 30.0 37.0 7 33.75075152244696 37.0 35.0 37.0 29.0 37.0 8 33.72649764631212 37.0 35.0 37.0 29.0 37.0 9 35.14146464872641 39.0 35.0 39.0 29.0 39.0 10-11 35.002864706733334 39.0 35.0 39.0 28.0 39.0 12-13 34.82046520886591 38.0 35.0 39.0 27.0 39.0 14-15 35.78104758981751 39.0 36.0 41.0 27.0 41.0 16-17 35.62164206453023 39.0 36.0 41.0 27.0 41.0 18-19 35.42677788018736 39.0 36.0 40.0 27.0 41.0 20-21 35.30146032517165 39.0 35.5 40.0 26.0 41.0 22-23 35.333726142195715 39.0 35.5 40.0 26.5 41.0 24-25 35.186147907308055 39.0 35.0 40.5 25.0 41.0 26-27 34.89556094723364 39.0 34.5 40.0 24.0 41.0 28-29 34.64511493410682 39.0 34.0 40.0 23.5 41.0 30-31 34.37468666537397 38.0 34.0 40.0 22.0 41.0 32-33 34.08782068220724 38.0 34.0 40.0 19.5 41.0 34-35 33.65283250281535 38.0 33.0 40.0 17.0 41.0 36-37 33.255655380797556 38.0 33.0 40.0 15.0 41.0 38-39 33.00368697932407 38.0 32.0 40.0 9.5 41.0 40-41 32.71883166014421 38.0 31.5 40.0 9.0 41.0 42-43 32.41466278265767 37.5 31.0 40.0 8.5 41.0 44-45 32.08026559850167 37.0 31.0 40.0 7.5 41.0 46-47 31.778051933770833 37.0 30.0 40.0 4.5 41.0 48-49 31.542134143210482 37.0 30.0 40.0 2.0 41.0 50-51 30.83186190228438 36.0 29.0 38.5 2.0 39.5 52-53 31.388642321739532 36.5 30.5 39.0 2.0 40.0 54-55 31.80562831168703 37.0 31.0 39.5 2.0 40.5 56-57 31.640781297296208 37.0 31.0 40.0 2.0 41.0 58-59 31.293522944500232 36.0 30.5 39.0 2.0 41.0 60-61 30.82379286890133 35.5 29.5 39.0 2.0 40.0 62-63 30.31518456350268 35.0 29.0 39.0 2.0 40.0 64-65 29.750525497132596 35.0 28.0 38.0 2.0 40.0 66-67 29.242260684561273 34.0 28.0 38.0 2.0 40.0 68-69 28.701506843244644 34.0 26.5 37.0 2.0 39.5 70-71 28.15650353844505 34.0 26.0 36.5 2.0 39.0 72-73 27.57208753838503 33.5 25.5 36.0 2.0 39.0 74-75 26.948058257321378 33.0 24.5 35.0 2.0 38.0 76-77 26.329032248232068 32.5 22.5 35.0 2.0 37.0 78-79 25.728895531052807 32.0 20.5 35.0 2.0 36.5 80-81 25.10179169610193 31.5 18.5 34.5 2.0 36.0 82-83 24.431776931772006 31.0 13.5 34.0 2.0 35.5 84-85 23.7723215824398 31.0 7.0 34.0 2.0 35.0 86-87 23.10106660970704 30.0 2.0 34.0 2.0 35.0 88-89 22.41325985478577 30.0 2.0 34.0 2.0 35.0 90-91 21.626666790152143 29.0 2.0 34.0 2.0 35.0 92-93 20.767062859656335 29.0 2.0 34.0 2.0 35.0 94-95 19.820364388445604 27.0 2.0 33.0 2.0 34.0 96-97 18.90186105117246 25.5 2.0 33.0 2.0 34.0 98 18.273628496446314 25.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 152150.0 3 27054.0 4 20733.0 5 17287.0 6 16100.0 7 17066.0 8 19517.0 9 22645.0 10 25156.0 11 27523.0 12 30136.0 13 33270.0 14 28758.0 15 29298.0 16 31941.0 17 36638.0 18 41268.0 19 41119.0 20 43058.0 21 46718.0 22 51204.0 23 56170.0 24 61812.0 25 69044.0 26 77541.0 27 87598.0 28 100548.0 29 116413.0 30 135934.0 31 162600.0 32 198253.0 33 251316.0 34 327800.0 35 443068.0 36 577575.0 37 585113.0 38 245333.0 39 10251.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.36929086864011 16.83608170548398 12.900391117215987 24.894236308659927 2 16.052622072765843 18.268117923959583 39.3002223236599 26.37903767961467 3 20.62244066855086 21.886506435158598 27.205622928607088 30.28542996768346 4 13.720802741204844 14.25245423173615 34.43900141287369 37.58774161418532 5 15.600202136604555 35.45350764252789 32.76736178886203 16.178928432005527 6 35.81398655144698 32.66867114013343 16.520577524841254 14.996764783578332 7 32.00352116722988 29.678476525199965 18.80908926506072 19.50891304250944 8 28.268034245438145 33.99055314430867 18.377469000599397 19.363943609653784 9 26.948776204631613 16.56257232573294 18.54057193694732 37.94807953268812 10-11 26.944493134848447 24.89956260709853 25.826324357819168 22.32961990023385 12-13 26.86595652731587 21.77921821203304 26.591675813656067 24.763149446995023 14-15 23.87382248510442 23.453743536807266 24.005199749134498 28.667234228953813 16-17 24.53269272054119 26.6029907431389 24.525435058167407 24.3388814781525 18-19 24.438858399708828 25.948650483818696 25.944955733964402 23.667535382508067 20-21 24.95514393186829 25.13687949594603 26.0010796195356 23.906896952650083 22-23 24.66349074999994 24.8376858442812 25.865794795480056 24.6330286102388 24-25 24.38719958256652 25.031286395216036 26.056112331649395 24.52540169056805 26-27 24.48248027454316 25.28243334408823 25.903029947496552 24.332056433872058 28-29 24.434700398954956 25.366303159773928 25.853193868830594 24.345802572440526 30-31 24.629005425938967 25.30126869546746 25.74830253934976 24.321423339243818 32-33 24.455373279740396 25.256722609648886 25.714653264992805 24.573250845617913 34-35 24.537009797576374 25.306530227041122 25.853610605764636 24.302849369617864 36-37 24.62760141251546 25.236272268676064 25.72627041010309 24.409855908705385 38-39 24.588358909727518 25.33970232462524 25.750388632001208 24.32155013364603 40-41 24.734209356005113 25.203526580007345 25.81454538039542 24.24771868359212 42-43 24.57523579680702 25.137188727003622 25.726539337176472 24.56103613901288 44-45 24.578627425983655 25.282872857613807 25.721783230682917 24.416716485719625 46-47 24.64803276164293 25.260092841619663 25.67840202991935 24.413472366818056 48-49 24.638805199358043 25.320942937299918 25.562406997816478 24.477844865525558 50-51 24.45943920794095 25.487308214139453 25.585036119856948 24.468216458062653 52-53 24.53393944296051 25.429049258866144 25.570232210228887 24.466779087944456 54-55 24.58151474617419 25.282200249608305 25.685562370722558 24.450722633494944 56-57 24.514715507647754 25.37976596342582 25.669639990409017 24.435878538517414 58-59 24.534184355690655 25.403399039713737 25.67111249749232 24.39130410710329 60-61 24.66876973838765 25.296309971533603 25.64306232564891 24.391857964429846 62-63 24.477914495287102 25.439711725944527 25.632643817712992 24.449729961055382 64-65 24.522410468903942 25.283183191676923 25.677688054192416 24.51671828522672 66-67 24.540510516627435 25.400432471784658 25.565968921630756 24.493088089957148 68-69 24.501822966037558 25.286046542043806 25.661373822271326 24.550756669647306 70-71 24.4535061401985 25.20266040918954 25.647663603682645 24.696169846929312 72-73 24.532820382268806 25.257525471124247 25.58077318989167 24.628880956715278 74-75 24.43830522769768 25.380202509387185 25.542646090322773 24.63884617259236 76-77 24.50977217662814 25.2680609150731 25.54902372429615 24.673143184002615 78-79 24.49779611564868 25.161946086926424 25.685198635695684 24.655059161729213 80-81 24.471939062039727 25.343534242517503 25.573659859127236 24.61086683631553 82-83 24.62887500537265 25.240409157468395 25.520469943482667 24.61024589367629 84-85 24.593360677863068 25.265052921117864 25.459512763847776 24.682073637171296 86-87 24.527137758545447 25.250394579170294 25.626697202528742 24.595770459755514 88-89 24.57391624019727 25.01561689900962 25.631908895515203 24.77855796527791 90-91 24.53705796753366 25.125692864846027 25.574259570600393 24.762989597019917 92-93 24.59628752164427 25.20119696299718 25.618530558157342 24.583984957201203 94-95 24.689311808141106 25.108492139986122 25.475854803148195 24.726341248724573 96-97 24.674274703820004 25.0585107591629 25.513292912177526 24.753921624839574 98 24.609942386963052 25.089489864800434 25.410718628984423 24.889849119252087 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 458.0 1 332.5 2 356.5 3 506.5 4 412.0 5 367.5 6 620.0 7 1222.0 8 1780.5 9 1835.0 10 1554.0 11 1425.5 12 1590.0 13 1881.5 14 2198.0 15 2526.5 16 2777.0 17 2924.0 18 2986.0 19 2889.5 20 2756.5 21 2645.0 22 2607.0 23 2761.5 24 3168.5 25 3866.0 26 4964.0 27 6413.5 28 8346.0 29 11229.0 30 15053.0 31 20220.0 32 26829.5 33 34235.0 34 42775.0 35 52384.0 36 62630.0 37 73797.0 38 85899.5 39 97398.5 40 109225.5 41 121828.5 42 134610.0 43 147224.5 44 158343.0 45 169306.5 46 179999.5 47 189657.0 48 195351.0 49 196320.5 50 196272.0 51 194922.0 52 194180.0 53 193551.0 54 188911.5 55 181458.0 56 170297.0 57 157605.5 58 144677.0 59 129179.5 60 112489.0 61 94188.5 62 75755.5 63 58722.0 64 43858.0 65 32974.5 66 24931.5 67 18843.0 68 14365.0 69 10756.0 70 8108.5 71 6337.0 72 4909.5 73 3578.0 74 2661.0 75 1971.0 76 1290.0 77 808.0 78 526.5 79 327.0 80 196.0 81 117.5 82 63.0 83 35.5 84 30.5 85 19.5 86 14.0 87 11.0 88 10.5 89 11.5 90 11.5 91 10.5 92 12.0 93 9.5 94 3.0 95 3.5 96 5.5 97 3.5 98 1.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4507141719982302 2 0.04349346038894643 3 0.051043268607405046 4 0.04844069496688049 5 0.05967162085707205 6 0.05962472763832386 7 0.03868690546725693 8 0.017186364671211714 9 0.01050408099959461 10-11 0.012579105929202026 12-13 0.009378643749638043 14-15 0.013423183866669448 16-17 0.012907358460439358 18-19 0.051664603755818564 20-21 0.07790135964543099 22-23 0.09336439852764672 24-25 0.06501744779436573 26-27 0.07934332612193784 28-29 0.07913230663757098 30-31 0.05262591474015647 32-33 0.02961306763948212 34-35 0.37512230337614766 36-37 0.5907842163990744 38-39 0.5441254637446251 40-41 0.5391665058620041 42-43 0.5146296291520135 44-45 0.4998348186369595 46-47 0.4900224126139007 48-49 0.4803037930283383 50-51 0.49432486543404713 52-53 0.5723786280404097 54-55 0.543093812932165 56-57 0.5027304748946603 58-59 0.48172231289547107 60-61 0.49373870019969474 62-63 0.5052040921836273 64-65 0.5240082729016515 66-67 0.5473610958382503 68-69 0.504395184160221 70-71 0.45536832395898813 72-73 0.4391549935768013 74-75 0.4219451822962156 76-77 0.4346884144910363 78-79 0.4291315680693757 80-81 0.4266813973897827 82-83 0.44470011669377485 84-85 0.41271894150750915 86-87 0.4164703990073643 88-89 0.4409721058032937 90-91 0.4255325135304521 92-93 0.420327366249403 94-95 0.43113625317086085 96-97 0.42533321735077234 98 0.4192253756088205 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4265009.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.41171094550244 #Duplication Level Percentage of deduplicated Percentage of total 1 77.22782115879374 46.654648087960055 2 12.881419108783062 15.563771355353484 3 4.3330099239237025 7.852936291442167 4 1.897136438941359 4.584370326940209 5 0.9926529075727285 2.998393026074812 6 0.6132202968343164 2.222741239096196 7 0.39657219191218285 1.6770323238776177 8 0.29304266508040205 1.4162567022029544 9 0.20936850225464565 1.1383478495370387 >10 1.0798502140296584 11.510490896327639 >50 0.057689347418597076 2.3586480012683206 >100 0.01786637991373139 1.719115127639892 >500 2.3390970569115685E-4 0.09724404199506613 >1k 1.1695483625004646E-4 0.2060047302845322 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.3446609374095108E-5 2 0.0 0.0 0.0 0.0 4.6893218748190216E-5 3 0.0 0.0 0.0 0.0 4.6893218748190216E-5 4 0.0 0.0 0.0 9.378643749638043E-5 4.6893218748190216E-5 5 0.0 0.0 0.0 9.378643749638043E-5 4.6893218748190216E-5 6 0.0 0.0 0.0 9.378643749638043E-5 4.6893218748190216E-5 7 0.0 0.0 0.0 1.4067965624457065E-4 7.033982812228532E-5 8 0.0 0.0 0.0 1.4067965624457065E-4 7.033982812228532E-5 9 0.0 0.0 0.0 1.4067965624457065E-4 9.378643749638043E-5 10-11 0.0 0.0 0.0 1.4067965624457065E-4 9.378643749638043E-5 12-13 0.0 0.0 0.0 2.2274278905390352E-4 1.2895635155752309E-4 14-15 0.0 1.0550974218342799E-4 0.0 2.3446609374095108E-4 1.5240296093161818E-4 16-17 0.0 1.8757287499276086E-4 0.0 2.6963600780209373E-4 1.6412626561866574E-4 18-19 0.0 1.8757287499276086E-4 0.0 3.516991406114266E-4 1.6412626561866574E-4 20-21 0.0 1.8757287499276086E-4 0.0 3.516991406114266E-4 1.6412626561866574E-4 22-23 0.0 1.8757287499276086E-4 0.0 4.220389687337119E-4 1.758495703057133E-4 24-25 0.0 2.2274278905390352E-4 0.0 4.220389687337119E-4 2.1101948436685596E-4 26-27 0.0 2.5791270311504617E-4 0.0 4.572088827948546E-4 2.1101948436685596E-4 28-29 0.0 2.813593124891413E-4 0.0 7.502914999710435E-4 2.1101948436685596E-4 30-31 0.0 2.813593124891413E-4 0.0 0.001524029609316182 2.1101948436685596E-4 32-33 0.0 2.813593124891413E-4 0.0 0.0037162875857940742 2.6963600780209373E-4 34-35 0.0 3.516991406114266E-4 0.0 0.006787793413800534 3.048059218632364E-4 36-37 0.0 4.337622734207595E-4 0.0 0.011770197905795744 3.165292265502839E-4 38-39 0.0 5.158254062300923E-4 0.0 0.019108986639887512 3.282525312373315E-4 40-41 0.0 5.392720156041875E-4 0.0 0.027819402022363843 3.282525312373315E-4 42-43 0.0 5.861652343523777E-4 0.0 0.03651809410015313 3.282525312373315E-4 44-45 0.0 6.096118437264728E-4 0.0 0.045298849310751746 3.3997583592437904E-4 46-47 0.0 6.096118437264728E-4 0.0 0.054525090099458176 3.516991406114266E-4 48-49 0.0 6.56505062474663E-4 0.0 0.06424370968502059 3.751457499855217E-4 50-51 0.0 7.151215859099008E-4 0.0 0.07457194111430948 3.751457499855217E-4 52-53 0.0 7.502914999710435E-4 0.0 0.08450158018423877 3.751457499855217E-4 54-55 0.0 7.62014804658091E-4 0.0 0.09550976328537641 3.751457499855217E-4 56-57 0.0 7.971847187192337E-4 0.0 0.10626003368339902 3.868690546725693E-4 58-59 1.1723304687047554E-5 7.971847187192337E-4 0.0 0.1171978769564144 3.9859235935961685E-4 60-61 2.3446609374095108E-5 8.089080234062811E-4 0.0 0.1275964482138256 3.9859235935961685E-4 62-63 2.3446609374095108E-5 8.206313280933287E-4 0.0 0.13866324783839845 3.9859235935961685E-4 64-65 2.3446609374095108E-5 8.206313280933287E-4 0.0 0.1501872563457662 4.220389687337119E-4 66-67 2.3446609374095108E-5 8.440779374674238E-4 0.0 0.1630594448921444 4.220389687337119E-4 68-69 2.3446609374095108E-5 8.440779374674238E-4 0.0 0.17516961863386454 4.220389687337119E-4 70-71 2.3446609374095108E-5 8.67524546841519E-4 0.0 0.188346613102106 4.220389687337119E-4 72-73 2.3446609374095108E-5 8.909711562156141E-4 0.0 0.2006443597188189 5.392720156041875E-4 74-75 2.3446609374095108E-5 8.909711562156141E-4 0.0 0.21239111101524055 5.627186249782826E-4 76-77 2.3446609374095108E-5 8.909711562156141E-4 0.0 0.2254508724366115 5.627186249782826E-4 78-79 2.3446609374095108E-5 8.909711562156141E-4 0.0 0.23927264866264059 5.744419296653301E-4 80-81 2.3446609374095108E-5 8.909711562156141E-4 0.0 0.2534461240292811 6.096118437264728E-4 82-83 3.516991406114266E-5 8.909711562156141E-4 0.0 0.2676195993959215 6.33058453100568E-4 84-85 4.6893218748190216E-5 9.026944609026616E-4 0.0 0.282027540856303 6.447817577876155E-4 86 4.6893218748190216E-5 9.144177655897092E-4 0.0 0.29364533580116714 6.56505062474663E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6470 0.0 42.33434 1 GGTATCA 3580 0.0 35.490013 1 GTACCTG 5565 0.0 34.90819 1 TACCTGG 5790 0.0 33.18296 2 CAACGCA 8110 0.0 32.73689 5 TCAACGC 8130 0.0 32.712753 4 TATCAAC 8340 0.0 31.889051 2 ATCAACG 8535 0.0 31.053028 3 AACGCAG 8715 0.0 30.613499 6 ACCTGGG 7290 0.0 25.663288 3 GTACATG 12985 0.0 25.206223 1 ACGCAGA 10700 0.0 25.012613 7 TACATGG 13000 0.0 24.091122 2 CGCAGAG 11365 0.0 23.30219 8 ACATGGG 13395 0.0 22.216806 3 GTGTAGC 2525 0.0 20.60142 1 GAGTACA 9985 0.0 19.27118 1 GCAGAGT 13475 0.0 19.177128 9 AGTACAT 9520 0.0 18.6885 2 CATGGGG 10280 0.0 18.421993 4 >>END_MODULE