##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921451_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4375325 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.673178335323662 31.0 31.0 34.0 28.0 34.0 2 30.789605800711946 31.0 31.0 34.0 27.0 34.0 3 30.91966539628485 31.0 31.0 34.0 27.0 34.0 4 34.445981727071704 37.0 35.0 37.0 32.0 37.0 5 34.44654077125699 37.0 35.0 37.0 32.0 37.0 6 34.53857142040877 37.0 35.0 37.0 32.0 37.0 7 34.433683669213146 37.0 35.0 37.0 31.0 37.0 8 34.419849496894514 37.0 35.0 37.0 31.0 37.0 9 35.90784181746499 39.0 37.0 39.0 31.0 39.0 10-11 35.79304908778205 39.0 37.0 39.0 30.0 39.0 12-13 35.64651780153474 39.0 37.0 39.0 30.0 39.0 14-15 36.705149560318375 40.0 37.0 41.0 30.5 41.0 16-17 36.56827332826704 40.0 37.0 41.0 30.0 41.0 18-19 36.39652094415843 40.0 36.0 41.0 30.0 41.0 20-21 36.28842988806546 39.0 36.0 41.0 29.5 41.0 22-23 36.33418100369687 40.0 36.5 41.0 29.5 41.0 24-25 36.21487878043345 39.5 36.0 41.0 29.0 41.0 26-27 35.96752355539303 39.0 36.0 41.0 27.5 41.0 28-29 35.74773142566552 39.0 36.0 40.5 27.0 41.0 30-31 35.50620148217561 39.0 35.5 40.0 27.0 41.0 32-33 35.25665887676915 39.0 35.0 40.0 25.5 41.0 34-35 34.85492289144235 38.0 34.5 40.0 24.5 41.0 36-37 34.49202047847874 38.0 34.0 40.0 24.0 41.0 38-39 34.272946238279445 38.0 34.0 40.0 23.0 41.0 40-41 34.0185551930428 38.0 33.0 40.0 21.5 41.0 42-43 33.74738219446556 38.0 33.0 40.0 19.5 41.0 44-45 33.44508065115163 38.0 33.0 40.0 18.0 41.0 46-47 33.174746790238444 38.0 32.0 40.0 15.5 41.0 48-49 32.97601469605115 38.0 32.0 40.0 14.5 41.0 50-51 32.210272379766074 36.0 31.0 39.0 13.5 40.0 52-53 32.7140687834618 37.0 32.5 39.0 15.0 40.0 54-55 33.15982172752881 38.0 33.0 40.0 14.5 41.0 56-57 33.023619273996786 37.0 33.0 40.0 13.0 41.0 58-59 32.69447549610601 37.0 32.0 40.0 9.0 41.0 60-61 32.24445692605693 36.0 31.5 39.0 7.5 41.0 62-63 31.763876512030535 36.0 31.0 39.0 4.5 40.0 64-65 31.223323524538177 35.0 30.5 38.5 2.0 40.0 66-67 30.740948158136824 35.0 30.0 38.0 2.0 40.0 68-69 30.226581453949137 34.5 29.5 37.5 2.0 39.5 70-71 29.702829161262308 34.0 29.0 37.0 2.0 39.0 72-73 29.14610617496986 34.0 28.5 36.0 2.0 39.0 74-75 28.550715432567866 34.0 27.5 35.5 2.0 38.0 76-77 27.965080422597175 33.0 26.5 35.0 2.0 37.0 78-79 27.40401501602738 33.0 26.0 35.0 2.0 36.5 80-81 26.827399450326546 32.5 25.0 35.0 2.0 36.0 82-83 26.197112214521205 32.0 24.0 34.5 2.0 35.5 84-85 25.582382794420987 32.0 22.0 34.0 2.0 35.0 86-87 24.964400930216613 31.0 19.5 34.0 2.0 35.0 88-89 24.31178883854342 31.0 16.5 34.0 2.0 35.0 90-91 23.570880448880942 30.5 6.5 34.0 2.0 35.0 92-93 22.748429430956556 30.0 2.0 34.0 2.0 35.0 94-95 21.81812059675567 29.0 2.0 34.0 2.0 35.0 96-97 20.89974561889688 29.0 2.0 33.5 2.0 34.5 98 20.257901984424013 28.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 106713.0 3 19970.0 4 15439.0 5 13536.0 6 12120.0 7 12994.0 8 14881.0 9 17417.0 10 19540.0 11 21964.0 12 24509.0 13 28555.0 14 23652.0 15 23165.0 16 25913.0 17 29778.0 18 33941.0 19 33047.0 20 34437.0 21 38178.0 22 42053.0 23 46811.0 24 52408.0 25 59185.0 26 68007.0 27 77552.0 28 91153.0 29 107330.0 30 128160.0 31 156360.0 32 197013.0 33 256311.0 34 348090.0 35 493272.0 36 676977.0 37 713614.0 38 299751.0 39 11529.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.908401258885625 17.474765451603975 14.087554783455367 24.52927850605503 2 15.76910966714586 18.99587427974821 38.777288622291145 26.45772743081478 3 19.64415571823338 22.85951002121235 27.78374378333582 29.71259047721845 4 13.992764322774043 15.360435832815197 34.76383661483179 35.88296322957897 5 15.871407371222471 35.4982928917104 32.59411622241143 16.0361835146557 6 34.6222763884407 33.20177772736223 16.98819155600086 15.187754328196206 7 30.910749244654966 30.193703072460533 19.65675987504739 19.238787807837113 8 27.962385411911335 33.03287047376907 19.224807193917986 19.77993692040161 9 27.0343860925967 16.476719847509187 19.055133912907525 37.433760146986586 10-11 26.475407362841636 25.000891484811383 26.133991538666212 22.389709613680772 12-13 26.660087442348452 22.11595397133523 26.654407289795785 24.569551296520537 14-15 23.95282749092568 23.584174398800013 24.20755300523989 28.255445105034415 16-17 24.374467896401967 26.564028842429444 24.74147294162127 24.32003031954732 18-19 24.353346972456524 25.95556853430726 26.097166003938522 23.593918489297693 20-21 24.980737068331056 25.183928544673932 25.906227007859687 23.929107379135324 22-23 24.730275315411358 24.893587450691506 25.76264090490274 24.613496328994394 24-25 24.516161936932633 25.13108206066911 25.845433692335014 24.507322310063234 26-27 24.53216656184526 25.293399865476335 25.781983138678893 24.392450433999514 28-29 24.567894103875147 25.35375433832936 25.694518707785463 24.383832850010037 30-31 24.69015885618788 25.247936945989448 25.624004376057368 24.437899821765306 32-33 24.597007384087433 25.26455312239044 25.486641597692696 24.65179789582944 34-35 24.68168429704486 25.30525368481425 25.62404264929623 24.38901936884466 36-37 24.738976660407648 25.2489434242541 25.533318775339218 24.47876113999903 38-39 24.783463944754157 25.279145636379415 25.499655489271323 24.43773492959511 40-41 24.817606162625818 25.197839936579054 25.509474182143986 24.47507971865114 42-43 24.779025526989507 25.08373074078066 25.47827343823067 24.658970293999168 44-45 24.733191075064692 25.198817896970933 25.446577042042772 24.6214139859216 46-47 24.863958959962183 25.187346830705827 25.394040303733956 24.554653905598034 48-49 24.823789919980577 25.231369948306504 25.2695253012372 24.67531483047572 50-51 24.676664201514793 25.390375063782646 25.290344576769265 24.642616157933297 52-53 24.790071651726052 25.364711021949628 25.274302811173417 24.570914515150903 54-55 24.75156694731023 25.17585955830676 25.371576406172515 24.7009970882105 56-57 24.79310540127678 25.318566042391836 25.31197179223333 24.576356764098055 58-59 24.84481659161139 25.216252920815684 25.35299028125284 24.585940206320082 60-61 24.90399053827789 25.135571149466905 25.35061028842814 24.60982802382707 62-63 24.733687294893866 25.312261074510573 25.335387482214323 24.618664148381235 64-65 24.751357015302883 25.158056561273412 25.371391696338357 24.71919472708535 66-67 24.769824896127258 25.284539483136125 25.285642861658168 24.65999275907845 68-69 24.712348017253717 25.265996372886395 25.32231244690929 24.699343162950594 70-71 24.677821149731223 25.091891575347304 25.413390087502393 24.816897187419084 72-73 24.77396767002638 25.124607235353636 25.286804726642465 24.814620367977522 74-75 24.633392105991426 25.300716784619464 25.26134625849723 24.80454485089188 76-77 24.810270532385914 25.125763073619673 25.249643432125364 24.81432296186905 78-79 24.754282612905563 25.05481081015308 25.363868130798412 24.82703844614295 80-81 24.725342842200526 25.221176667216127 25.23617967240875 24.817300818174598 82-83 24.848584979097197 25.10306738266943 25.21347129842629 24.83487633980709 84-85 24.809357742673555 25.166556961981733 25.161254409468388 24.86283088587633 86-87 24.764247204825793 25.099798955892876 25.329893224873274 24.806060614408054 88-89 24.76608421450472 24.99300244564238 25.27070030421853 24.97021303563437 90-91 24.779633662127523 25.045737709246147 25.250739528653078 24.923889099973255 92-93 24.74503517338067 25.121746063411948 25.31367704218074 24.819541721026642 94-95 24.88224947751255 24.974888689452467 25.240523307084406 24.902338525950572 96-97 24.89753976045012 24.964541823888688 25.217179893825204 24.920738521835993 98 24.87622938438151 25.056025630606864 25.146750192032126 24.9209947929795 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 534.0 1 402.5 2 436.0 3 576.0 4 473.5 5 469.0 6 731.0 7 1453.5 8 2128.5 9 2095.0 10 1707.5 11 1537.0 12 1745.0 13 2084.0 14 2451.0 15 2725.0 16 2893.0 17 3040.5 18 3080.0 19 2956.0 20 2742.0 21 2505.5 22 2388.0 23 2395.5 24 2502.0 25 2815.5 26 3433.0 27 4363.5 28 5695.5 29 7758.5 30 10825.0 31 15166.5 32 20939.0 33 28081.5 34 36778.5 35 47484.5 36 59280.0 37 72224.0 38 85913.0 39 98613.5 40 111960.0 41 126085.5 42 139581.5 43 153367.0 44 166759.0 45 178848.0 46 191520.5 47 203391.5 48 208658.5 49 207859.5 50 206821.0 51 205303.0 52 204409.0 53 203396.5 54 198255.0 55 190568.0 56 178121.0 57 163942.5 58 150019.0 59 134129.5 60 116371.0 61 96638.5 62 77042.0 63 58091.0 64 42237.5 65 31191.5 66 23792.5 67 18246.5 68 13745.0 69 10293.5 70 7566.0 71 5568.0 72 4061.5 73 2885.0 74 2107.0 75 1546.0 76 1035.5 77 600.0 78 355.5 79 207.5 80 128.0 81 74.0 82 48.5 83 34.5 84 23.5 85 21.5 86 19.0 87 16.5 88 10.0 89 5.0 90 3.5 91 6.0 92 6.5 93 5.5 94 4.5 95 2.0 96 1.5 97 2.5 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.47265060309805557 2 0.0463508425088422 3 0.054875923502825504 4 0.051927571094718676 5 0.06230394313565278 6 0.06344671538685698 7 0.04175689805900133 8 0.019472839160519506 9 0.011519144292138298 10-11 0.013736122459474441 12-13 0.010113534423157138 14-15 0.014078954134835698 16-17 0.013473284841697474 18-19 0.054064555204470524 20-21 0.081971053578877 22-23 0.09707850273979647 24-25 0.06784638855399314 26-27 0.08235959614428642 28-29 0.08416517630118905 30-31 0.05574443041374069 32-33 0.03182620719603686 34-35 0.39470210784341736 36-37 0.6216338214875466 38-39 0.5703004919634541 40-41 0.564803757435162 42-43 0.5388856827778508 44-45 0.5236753841143229 46-47 0.5143046516544485 48-49 0.5044082439590202 50-51 0.5177215406855491 52-53 0.5979555804425957 54-55 0.5692719969373703 56-57 0.5267837246375984 58-59 0.5048539251369898 60-61 0.5171958654499952 62-63 0.5292749681452236 64-65 0.5475136132744425 66-67 0.5725288978533023 68-69 0.528052201836435 70-71 0.47705027626519175 72-73 0.4603200905075623 74-75 0.44052727511670564 76-77 0.4551204767645832 78-79 0.449349476896002 80-81 0.44638969676538315 82-83 0.4664110666064807 84-85 0.4327107129184689 86-87 0.4357847702742082 88-89 0.462411363727266 90-91 0.4459097324198774 92-93 0.4418414632055904 94-95 0.45066366498488686 96-97 0.4454297680743716 98 0.44072154639941036 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4375325.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.94745472661947 #Duplication Level Percentage of deduplicated Percentage of total 1 74.34670690192216 40.85162311566614 2 13.881800185491432 15.255391744325367 3 4.856770285744447 8.00601496180601 4 2.2743397231037377 4.998767158727794 5 1.1723576608497492 3.2209034746473555 6 0.7685665969080545 2.5338466972798392 7 0.5161324556212948 1.9852115316733019 8 0.36047277448489085 1.584564916494996 9 0.27132228543133313 1.341762209555499 >10 1.4376325580181937 14.184606783110763 >50 0.08461134078364016 3.1551448603655086 >100 0.02870265073246793 2.494298696294922 >500 4.1755782290467614E-4 0.15030443243972438 >1k 1.6702308564617586E-4 0.2375594176126949 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1427722512041962E-4 2 0.0 0.0 0.0 2.2855445024083926E-5 1.1427722512041962E-4 3 0.0 0.0 0.0 2.2855445024083926E-5 1.1427722512041962E-4 4 0.0 0.0 0.0 2.2855445024083926E-5 1.1427722512041962E-4 5 0.0 0.0 0.0 2.2855445024083926E-5 1.1427722512041962E-4 6 0.0 0.0 0.0 2.2855445024083926E-5 1.1427722512041962E-4 7 0.0 0.0 0.0 2.2855445024083926E-5 1.1427722512041962E-4 8 0.0 2.2855445024083926E-5 0.0 2.2855445024083926E-5 1.1427722512041962E-4 9 0.0 2.2855445024083926E-5 0.0 2.2855445024083926E-5 1.1427722512041962E-4 10-11 0.0 2.2855445024083926E-5 0.0 5.713861256020981E-5 1.1427722512041962E-4 12-13 0.0 2.2855445024083926E-5 0.0 2.2855445024083925E-4 1.9427128270471336E-4 14-15 0.0 2.2855445024083926E-5 0.0 2.2855445024083925E-4 2.2855445024083925E-4 16-17 0.0 2.2855445024083926E-5 0.0 2.7426534028900714E-4 2.6283761777696514E-4 18-19 0.0 2.2855445024083926E-5 0.0 3.656871203853428E-4 2.9712078531309103E-4 20-21 0.0 2.2855445024083926E-5 0.0 3.656871203853428E-4 3.542593978733008E-4 22-23 0.0 2.2855445024083926E-5 0.0 3.7711484289738476E-4 3.656871203853428E-4 24-25 0.0 2.2855445024083926E-5 0.0 4.1139801043351066E-4 3.7711484289738476E-4 26-27 0.0 2.2855445024083926E-5 0.0 5.028197905298464E-4 3.885425654094267E-4 28-29 0.0 2.2855445024083926E-5 0.0 7.885128533308954E-4 3.885425654094267E-4 30-31 0.0 2.2855445024083926E-5 0.0 0.0017712969893665044 3.885425654094267E-4 32-33 0.0 2.2855445024083926E-5 0.0 0.004182546439407358 3.885425654094267E-4 34-35 0.0 2.2855445024083926E-5 0.0 0.007130898847514185 3.885425654094267E-4 36-37 0.0 2.2855445024083926E-5 0.0 0.011976253192619976 3.885425654094267E-4 38-39 0.0 4.571089004816785E-5 0.0 0.01900430253752578 4.342534554575946E-4 40-41 0.0 4.571089004816785E-5 0.0 0.027060846908515367 4.342534554575946E-4 42-43 0.0 4.571089004816785E-5 0.0 0.03602018135795627 4.342534554575946E-4 44-45 0.0 4.571089004816785E-5 0.0 0.04524235342517413 4.4568117796963655E-4 46-47 0.0 4.571089004816785E-5 0.0 0.055355887848331266 4.571089004816785E-4 48-49 0.0 4.571089004816785E-5 0.0 0.06522944009873552 4.7996434550576244E-4 50-51 0.0 4.571089004816785E-5 0.0 0.07516013096169999 5.256752355539303E-4 52-53 0.0 6.856633507225177E-5 0.0 0.08562792478273043 5.828138481141401E-4 54-55 0.0 7.999405758429373E-5 0.0 0.09683852056704359 6.17097015650266E-4 56-57 0.0 1.1427722512041962E-4 0.0 0.10840337574923006 6.513801831863919E-4 58-59 0.0 1.1427722512041962E-4 0.0 0.12068817744967517 6.856633507225177E-4 60-61 0.0 1.2570494763246157E-4 0.0 0.1338186306160114 6.856633507225177E-4 62-63 0.0 1.3713267014450354E-4 0.0 0.14611486003896854 7.313742407706856E-4 64-65 0.0 1.4856039265654552E-4 0.0 0.16007953694868382 7.313742407706856E-4 66-67 0.0 2.171267277287973E-4 0.0 0.17510699205201902 7.313742407706856E-4 68-69 0.0 2.2855445024083925E-4 0.0 0.19027157982549867 7.542296857947695E-4 70-71 0.0 2.2855445024083925E-4 0.0 0.2058018547193637 7.656574083068114E-4 72-73 0.0 2.2855445024083925E-4 0.0 0.22104643655042766 8.113682983549793E-4 74-75 0.0 2.2855445024083925E-4 0.0 0.2366224223343409 8.456514658911052E-4 76-77 0.0 2.2855445024083925E-4 0.0 0.2536268734322593 8.456514658911052E-4 78-79 0.0 2.2855445024083925E-4 0.0 0.2708370235353945 8.570791884031472E-4 80-81 0.0 2.2855445024083925E-4 0.0 0.28936136172741456 9.14217800963357E-4 82-83 0.0 2.2855445024083925E-4 0.0 0.3086742127727654 0.0010284950260837766 84-85 0.0 2.2855445024083925E-4 0.0 0.32779279253541166 0.0010284950260837766 86 0.0 2.2855445024083925E-4 0.0 0.3423745664607772 0.0010284950260837766 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7720 0.0 38.75764 1 GGTATCA 4720 0.0 31.110714 1 TCAACGC 9875 0.0 29.572062 4 GTACCTG 5225 0.0 29.337236 1 CAACGCA 9965 0.0 29.304976 5 TATCAAC 10040 0.0 29.086065 2 ATCAACG 10340 0.0 28.242174 3 TACCTGG 5415 0.0 27.937963 2 AACGCAG 10775 0.0 27.180569 6 GTACATG 13630 0.0 24.620277 1 ACGCAGA 12615 0.0 23.138105 7 TACATGG 14255 0.0 22.962029 2 ACATGGG 14415 0.0 21.625866 3 CGCAGAG 13615 0.0 21.197971 8 GAGTACA 10530 0.0 19.628145 1 ACCTGGG 7475 0.0 19.380062 3 CATGGGG 11280 0.0 18.695108 4 GCAGAGT 15350 0.0 18.682814 9 AGAGTAC 12225 0.0 18.043417 10-11 AGTACAT 10180 0.0 17.743027 2 >>END_MODULE