##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921451_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4375325 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03050287692914 33.0 31.0 34.0 30.0 34.0 2 32.149379303251756 34.0 31.0 34.0 30.0 34.0 3 32.27176449749447 34.0 31.0 34.0 30.0 34.0 4 35.813663442144296 37.0 35.0 37.0 35.0 37.0 5 35.62890459565861 37.0 35.0 37.0 35.0 37.0 6 35.66537685771914 37.0 35.0 37.0 35.0 37.0 7 35.6013237873758 37.0 35.0 37.0 33.0 37.0 8 35.55822458903053 37.0 35.0 37.0 33.0 37.0 9 37.19710741487775 39.0 37.0 39.0 34.0 39.0 10-11 37.11448372406621 39.0 37.0 39.0 34.0 39.0 12-13 37.00443087084959 39.0 37.0 39.0 33.0 39.0 14-15 38.32226440321576 40.0 38.0 41.0 34.0 41.0 16-17 38.22817310714061 40.0 38.0 41.0 33.0 41.0 18-19 38.12650454537663 40.0 38.0 41.0 33.5 41.0 20-21 38.01937981749927 40.0 38.0 41.0 33.0 41.0 22-23 37.990086907829706 40.0 38.0 41.0 33.0 41.0 24-25 38.04798089284796 40.0 38.0 41.0 33.0 41.0 26-27 37.94899796015153 40.0 38.0 41.0 33.0 41.0 28-29 37.82030443452772 40.0 38.0 41.0 33.0 41.0 30-31 37.68732368452629 40.0 38.0 41.0 33.0 41.0 32-33 37.53696765383143 40.0 37.5 41.0 32.0 41.0 34-35 37.40460491506345 40.0 37.0 41.0 32.0 41.0 36-37 37.31866467062447 40.0 37.0 41.0 32.0 41.0 38-39 37.29785753058344 40.0 37.0 41.0 32.0 41.0 40-41 37.143604646511974 40.0 37.0 41.0 31.0 41.0 42-43 36.922000308548505 40.0 36.5 41.0 31.0 41.0 44-45 36.733155936987544 39.5 36.0 41.0 30.5 41.0 46-47 36.4777467959523 39.0 36.0 41.0 30.0 41.0 48-49 36.1621585825053 39.0 35.0 40.0 30.0 41.0 50-51 35.896123945078365 39.0 35.0 40.0 29.0 41.0 52-53 35.59478061629707 38.0 35.0 40.0 28.0 41.0 54-55 35.27768851456749 38.0 34.5 40.0 28.0 41.0 56-57 34.912279430670864 38.0 34.0 40.0 27.0 41.0 58-59 34.53021421265849 37.5 34.0 40.0 26.0 41.0 60-61 34.1132335312234 37.0 33.0 39.5 26.0 41.0 62-63 33.67805145903448 36.0 33.0 39.0 25.5 40.0 64-65 33.17066800751944 36.0 32.0 39.0 23.5 40.0 66-67 32.64977813076743 35.0 32.0 38.0 22.5 40.0 68-69 32.15222629176118 35.0 31.0 37.5 22.0 40.0 70-71 31.60183209247313 35.0 31.0 37.0 20.0 39.0 72-73 31.053582076760012 34.0 30.0 36.0 18.5 39.0 74-75 30.533839543348208 34.0 30.0 36.0 17.5 38.5 76-77 29.221665133447228 32.5 28.0 34.5 16.0 36.0 78-79 30.167701713586993 34.0 30.0 35.0 17.5 37.0 80-81 30.20972327769937 34.0 30.0 35.0 17.0 36.5 82-83 29.88269042871101 34.0 30.0 35.0 12.5 36.0 84-85 29.40250312833904 34.0 29.0 35.0 7.0 36.0 86-87 28.892126984852553 34.0 29.0 35.0 3.5 35.0 88-89 28.36300640523847 33.0 28.5 35.0 2.0 35.0 90-91 27.904448126710587 33.0 27.0 35.0 2.0 35.0 92-93 27.480923931365098 33.0 27.0 34.5 2.0 35.0 94-95 26.997490472136356 32.5 25.5 34.0 2.0 35.0 96-97 26.24281190540131 32.0 25.0 34.0 2.0 35.0 98-99 25.238550964785475 32.0 21.5 34.0 2.0 35.0 100-101 21.583295183786348 28.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 22387.0 3 12442.0 4 7449.0 5 5663.0 6 4956.0 7 5342.0 8 6014.0 9 7335.0 10 8455.0 11 10328.0 12 12344.0 13 14350.0 14 16021.0 15 18190.0 16 20521.0 17 24209.0 18 25039.0 19 22524.0 20 22651.0 21 24404.0 22 25917.0 23 28872.0 24 33414.0 25 38715.0 26 46986.0 27 56708.0 28 69804.0 29 85123.0 30 105472.0 31 132724.0 32 170933.0 33 231849.0 34 331801.0 35 506110.0 36 796710.0 37 991275.0 38 421030.0 39 11258.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.30702342854759 17.920296258118004 14.394665079482264 24.37801523385215 2 15.902201550741946 19.278476456034692 38.48148423259987 26.337837760623493 3 19.665000935987806 23.034625606020676 28.01296074542572 29.287412712565803 4 14.209830151261244 15.69022089117533 34.82928225918581 35.27066669837762 5 15.882375393372216 35.51559444144402 32.69629642157845 15.905733743605307 6 34.660928877764604 33.30705495542968 16.872548266221695 15.159467900584026 7 30.95347777595809 30.189513469102447 19.71709532536188 19.139913429577586 8 27.973456452149108 33.11038296776048 19.239633471520918 19.6765271085695 9 26.99925786493874 16.41502553548568 19.145002758985463 37.44071384059012 10-11 26.470352725422515 25.05273402467907 26.194214036539076 22.282699213359347 12-13 26.62729115662787 22.142129782468096 26.750478324023085 24.48010073688095 14-15 23.92937301073706 23.611811371817108 24.285723597414176 28.173092020031653 16-17 24.32043158016277 26.60488442838378 24.872344779414203 24.20233921203925 18-19 24.331529802052085 26.017197244480712 26.186121821646243 23.46515113182096 20-21 24.96000259714488 25.164904982448693 26.097465177454037 23.777627242952388 22-23 24.717711984537484 24.841974160007016 25.99269975439099 24.44761410106451 24-25 24.471520718024884 25.130687991337464 26.01942806398865 24.37836322664901 26-27 24.489814113442613 25.286330359299292 25.926240892527975 24.29761463473012 28-29 24.50289370234673 25.340719148844236 25.92084271543826 24.235544433370777 30-31 24.672480424593502 25.219575852193156 25.782796269836112 24.325147453377237 32-33 24.499585323432292 25.212346744808944 25.727203959958366 24.56086397180039 34-35 24.65270210238758 25.24085679062491 25.84858882532378 24.25785228166373 36-37 24.704709617170813 25.250803534764373 25.713295321697917 24.3311915263669 38-39 24.673046953800544 25.262965399124166 25.74709306810967 24.316894578965627 40-41 24.779279959410122 25.13766463492483 25.699353033079632 24.383702372585418 42-43 24.705250442555748 25.140949292082222 25.679890198175837 24.473910067186193 44-45 24.67829576045434 25.139180294385937 25.642708420126358 24.539815525033365 46-47 24.77024527250907 25.174675776040534 25.64408995478119 24.4109889966692 48-49 24.74821324514497 25.288899509403095 25.452709893911805 24.510177351540126 50-51 24.674869314584424 25.370376296282753 25.42910759061122 24.525646798521603 52-53 24.777428335032294 25.38008374436028 25.341605679257274 24.50088224135015 54-55 24.771357778292558 25.18342633456008 25.462550011468256 24.582665875679112 56-57 24.784744375446127 25.33032604390207 25.414266080659694 24.470663499992114 58-59 24.827278993907566 25.273092092271458 25.388947958340342 24.51068095548063 60-61 24.93556950659116 25.164971891265118 25.457996209655015 24.441462392488702 62-63 24.71714103659425 25.328433907758598 25.43255622576599 24.521868829881164 64-65 24.763572583436886 25.18296988881177 25.433520264203047 24.619937263548298 66-67 24.770098168502187 25.32835156965683 25.33098101165609 24.57056925018489 68-69 24.75416014684297 25.259996313374174 25.379091251307585 24.60675228847527 70-71 24.742358061633364 25.134382747987903 25.44625381552598 24.677005374852747 72-73 24.84226951732889 25.172151457387248 25.3197335291949 24.665845496088963 74-75 24.69058899342463 25.328882827431876 25.22658430646702 24.753943872676473 76-77 24.80053039063123 25.152863274942067 25.35312379357681 24.69348254084989 78-79 24.73533980540332 25.143933586584932 25.455307939479905 24.665418668531842 80-81 24.701200183502202 25.29098622601751 25.34425810844349 24.6635554820368 82-83 24.79487428626951 25.237121415629773 25.283943278787845 24.684061019312875 84-85 24.740790135880363 25.31638914095523 25.259569913538986 24.683250809625413 86-87 24.71605786059413 25.228377360873814 25.372343511037272 24.68322126749478 88-89 24.739642003086992 25.09639814504728 25.3394743841094 24.824485467756325 90-91 24.704882900647497 25.2521025519905 25.286466128933334 24.75654841842867 92-93 24.774926187314097 25.307141263029266 25.32319346423881 24.59473908541783 94-95 24.797224856836536 25.17559217107547 25.260701102393234 24.76648186969476 96-97 24.7407381841936 25.19144644002419 25.340528269663377 24.727287106118833 98-99 24.74203628532251 25.18773413194293 25.329370457220296 24.740859125514262 100-101 25.263149473746765 24.66297107507201 25.389468535376597 24.684410915804627 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 218.0 1 178.5 2 279.0 3 423.0 4 329.5 5 280.0 6 531.5 7 1150.0 8 1755.0 9 1776.5 10 1304.5 11 941.0 12 893.5 13 959.0 14 1032.5 15 1120.5 16 1209.0 17 1301.5 18 1393.0 19 1435.0 20 1512.0 21 1583.0 22 1734.0 23 1971.0 24 2198.0 25 2546.0 26 3054.5 27 3915.0 28 5203.0 29 6864.5 30 9498.5 31 13305.0 32 18280.5 33 24302.5 34 31387.5 35 40056.0 36 50549.5 37 62229.0 38 74936.0 39 87735.5 40 100840.5 41 113918.0 42 126680.5 43 140871.5 44 155409.0 45 169374.5 46 180676.0 47 190825.0 48 201959.5 49 207354.0 50 204900.5 51 202160.5 52 201780.0 53 199531.5 54 194955.0 55 188109.0 56 176372.0 57 161014.0 58 146627.0 59 132656.5 60 115389.5 61 96658.5 62 78194.0 63 59176.0 64 42788.5 65 31722.0 66 24070.0 67 18478.0 68 14064.0 69 10436.0 70 7832.0 71 5897.5 72 4265.0 73 3045.0 74 2206.0 75 1521.5 76 1009.0 77 595.5 78 314.0 79 172.5 80 102.5 81 54.0 82 26.0 83 14.0 84 7.5 85 2.0 86 2.0 87 1.5 88 1.0 89 0.0 90 0.0 91 0.0 92 1.0 93 1.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3136452720655037 2 0.0 3 0.006125259266454492 4 0.056978624445041225 5 3.656871203853428E-4 6 0.06648648957506013 7 0.07754852496671676 8 0.1073291698330981 9 0.09491866318502054 10-11 0.09903264328935564 12-13 0.09905549873437973 14-15 0.0673207133184392 16-17 0.0372543753892568 18-19 0.04057984264026101 20-21 0.02950637952609235 22-23 0.04366532771851234 24-25 0.035403084342306 26-27 0.02202122128070486 28-29 0.024786730128619015 30-31 0.002936924685594784 32-33 0.005222469188003177 34-35 0.008467942381423094 36-37 0.009976401753012632 38-39 0.014913177878214763 40-41 0.019095724317622118 42-43 0.0038854256540942675 44-45 0.015850251124202203 46-47 0.026272334055184473 48-49 0.0033026118059801273 50-51 0.007199465182586436 52-53 0.002399821727528812 54-55 0.0046510830624010785 56-57 0.004068269214286938 58-59 0.0013941821464691195 60-61 0.005976698873797947 62-63 0.015141732328455601 64-65 0.00814796615108592 66-67 0.040534131750212844 68-69 0.06314959460154389 70-71 0.013724694736962396 72-73 0.03399747447332484 74-75 0.053458885911332306 76-77 0.3029946346842806 78-79 0.0744287567209293 80-81 0.03509453583448086 82-83 0.029712078531309104 84-85 0.02115271436978967 86-87 0.11885974184774845 88-89 0.5300749087210664 90-91 0.13423002862644487 92-93 0.04783644643540766 94-95 0.007850845365772829 96-97 0.0048224989000817085 98-99 0.008867912669344563 100-101 0.0066852176695445485 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4375325.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.70048863195918 #Duplication Level Percentage of deduplicated Percentage of total 1 71.3933388525463 36.910705037436806 2 15.335414033460083 15.856967978065809 3 5.424069827377536 8.412811813478552 4 2.4983360105949326 5.1666077005831035 5 1.4033961629452494 3.6278133684243006 6 0.8688025073592525 2.69505084930868 7 0.5846911239278139 2.116017176408617 8 0.4230925021411269 1.7499271277771602 9 0.312178440490478 1.4525800122348635 >10 1.6208659371456917 15.150216297979014 >50 0.10038600170596246 3.5366933670977985 >100 0.03463211874515689 2.8513770537445806 >500 5.752367629719789E-4 0.19143421492970167 >1k 2.2124479752094482E-4 0.2817980025311527 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4502 0.10289521349842583 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.856633507225177E-5 2 0.0 0.0 0.0 0.0 6.856633507225177E-5 3 0.0 0.0 0.0 0.0 6.856633507225177E-5 4 0.0 0.0 0.0 6.856633507225177E-5 6.856633507225177E-5 5 0.0 0.0 0.0 6.856633507225177E-5 6.856633507225177E-5 6 0.0 0.0 0.0 6.856633507225177E-5 6.856633507225177E-5 7 0.0 2.2855445024083926E-5 0.0 6.856633507225177E-5 6.856633507225177E-5 8 0.0 2.2855445024083926E-5 0.0 6.856633507225177E-5 6.856633507225177E-5 9 0.0 2.2855445024083926E-5 0.0 6.856633507225177E-5 6.856633507225177E-5 10-11 0.0 2.2855445024083926E-5 0.0 1.599881151685875E-4 6.856633507225177E-5 12-13 0.0 3.428316753612589E-5 0.0 2.2855445024083925E-4 1.5998811516858746E-4 14-15 0.0 7.999405758429373E-5 0.0 2.2855445024083925E-4 2.171267277287973E-4 16-17 0.0 1.1427722512041962E-4 0.0 2.7426534028900714E-4 2.514098952649232E-4 18-19 0.0 1.1427722512041962E-4 0.0 3.656871203853428E-4 2.742653402890071E-4 20-21 0.0 1.2570494763246157E-4 0.0 3.656871203853428E-4 3.19976230337175E-4 22-23 0.0 1.3713267014450354E-4 0.0 3.885425654094267E-4 3.428316753612589E-4 24-25 0.0 1.3713267014450354E-4 0.0 4.1139801043351066E-4 3.885425654094267E-4 26-27 0.0 1.3713267014450354E-4 0.0 4.7996434550576244E-4 3.885425654094267E-4 28-29 0.0 1.3713267014450354E-4 0.0 7.542296857947696E-4 3.885425654094267E-4 30-31 0.0 1.3713267014450354E-4 0.0 0.0017255860993183364 3.999702879214687E-4 32-33 0.0 1.3713267014450354E-4 0.0 0.004239685051967567 4.1139801043351066E-4 34-35 0.0 1.3713267014450354E-4 0.0 0.007199465182586437 4.342534554575946E-4 36-37 0.0 1.4856039265654552E-4 0.0 0.01211338586276448 4.571089004816785E-4 38-39 0.0 1.599881151685875E-4 0.0 0.019301423322838875 4.571089004816785E-4 40-41 0.0 1.599881151685875E-4 0.0 0.027277973636244165 4.571089004816785E-4 42-43 0.0 1.599881151685875E-4 0.0 0.03631730214326935 5.142475130418883E-4 44-45 0.0 1.599881151685875E-4 0.0 0.04553947421048722 5.599584030900562E-4 46-47 0.0 1.599881151685875E-4 0.0 0.05571014724620457 6.056692931382241E-4 48-49 0.0 1.7141583768062946E-4 0.0 0.06542371138144024 6.17097015650266E-4 50-51 0.0 1.828435601926714E-4 0.0 0.07525155274179632 6.628079056984339E-4 52-53 0.0 1.828435601926714E-4 0.0 0.08555935844765816 6.856633507225177E-4 54-55 0.0 1.828435601926714E-4 0.0 0.09643855027912213 7.313742407706856E-4 56-57 0.0 1.828435601926714E-4 0.0 0.10774056784353161 7.656574083068114E-4 58-59 0.0 1.9427128270471336E-4 0.0 0.11987680915132018 7.770851308188534E-4 60-61 0.0 2.2855445024083925E-4 0.0 0.13288155737002394 7.770851308188534E-4 62-63 0.0 2.2855445024083925E-4 0.0 0.1450177986778125 7.999405758429374E-4 64-65 0.0 2.2855445024083925E-4 0.0 0.1588567706398953 7.999405758429374E-4 66-67 0.0 2.2855445024083925E-4 0.0 0.17355282179038128 8.113682983549794E-4 68-69 0.0 2.2855445024083925E-4 0.0 0.18848885511362012 8.227960208670213E-4 70-71 0.0 2.3998217275288122E-4 0.0 0.20380200327975637 9.02790078451315E-4 72-73 0.0 2.514098952649232E-4 0.0 0.21874946432550724 0.0010513504711078606 74-75 0.0 2.514098952649232E-4 0.0 0.23414260654922778 0.0010856336386439866 76-77 0.0 2.742653402890071E-4 0.0 0.2510099249770017 0.0011199168061801123 78-79 0.0 2.742653402890071E-4 0.0 0.26783153251472747 0.0011199168061801123 80-81 0.0 2.8569306280104903E-4 0.0 0.28594447269631396 0.0012113385862764481 82-83 2.2855445024083926E-5 2.9712078531309103E-4 0.0 0.3046859376160628 0.0013713267014450355 84-85 2.2855445024083926E-5 3.0854850782513303E-4 0.0 0.32359881837349225 0.0013941821464691195 86-87 2.2855445024083926E-5 3.19976230337175E-4 0.0 0.3432545010942044 0.0014741762040534133 88-89 2.2855445024083926E-5 3.19976230337175E-4 0.0 0.3643500768514339 0.0015655979841497488 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7895 0.0 41.93155 1 GGTATCA 4495 0.0 34.969746 1 TCAACGC 9960 0.0 32.474407 4 TATCAAC 10215 0.0 31.848993 2 CAACGCA 10225 0.0 31.712605 5 ATCAACG 10560 0.0 30.538967 3 AACGCAG 11120 0.0 29.205896 6 GTACCTG 5495 0.0 26.785454 1 TACCTGG 5725 0.0 25.55164 2 ACGCAGA 13145 0.0 24.708113 7 GTACATG 13905 0.0 24.698608 1 TACATGG 14220 0.0 23.546864 2 CGCAGAG 14140 0.0 22.96946 8 ACATGGG 14585 0.0 22.111176 3 TATCACG 415 0.0 20.600033 2 GCAGAGT 16160 0.0 19.627468 9 ACCTGGG 7515 0.0 18.960106 3 GAGTACA 11100 0.0 18.795736 1 AGAGTAC 12955 0.0 18.472145 10-11 AGTACAT 10345 0.0 18.1806 2 >>END_MODULE