##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921450_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4625323 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.184683102131462 31.0 31.0 34.0 27.0 34.0 2 30.269526474151103 31.0 31.0 34.0 26.0 34.0 3 30.40771012100128 31.0 31.0 34.0 26.0 34.0 4 33.89904013189998 37.0 35.0 37.0 30.0 37.0 5 33.875862939734155 37.0 35.0 37.0 30.0 37.0 6 33.97176110727835 37.0 35.0 37.0 30.0 37.0 7 33.84604534645472 37.0 35.0 37.0 30.0 37.0 8 33.82186044088164 37.0 35.0 37.0 30.0 37.0 9 35.252477070250016 39.0 35.0 39.0 30.0 39.0 10-11 35.12226724490376 39.0 35.0 39.0 29.0 39.0 12-13 34.94730346399592 39.0 35.0 39.0 28.0 39.0 14-15 35.94528479416464 40.0 36.0 41.0 27.0 41.0 16-17 35.79034253391601 39.5 36.0 41.0 27.0 41.0 18-19 35.58929473682163 39.0 36.0 41.0 27.0 41.0 20-21 35.46325251231103 39.0 36.0 40.0 27.0 41.0 22-23 35.50106630391002 39.0 36.0 41.0 26.5 41.0 24-25 35.356173612091524 39.0 36.0 41.0 25.5 41.0 26-27 35.071836172306234 39.0 35.0 40.5 24.5 41.0 28-29 34.82442804534948 39.0 35.0 40.0 24.0 41.0 30-31 34.557914333766526 38.5 34.0 40.0 23.0 41.0 32-33 34.28262091101529 38.0 34.0 40.0 21.0 41.0 34-35 33.85325662661829 38.0 33.5 40.0 17.5 41.0 36-37 33.45444037097517 38.0 33.0 40.0 15.0 41.0 38-39 33.20664308200746 38.0 33.0 40.0 12.5 41.0 40-41 32.921592286635985 38.0 32.0 40.0 9.0 41.0 42-43 32.61059984351363 38.0 31.5 40.0 8.5 41.0 44-45 32.279402973586926 37.0 31.0 40.0 8.0 41.0 46-47 31.97442935336624 37.0 31.0 40.0 6.5 41.0 48-49 31.74939739343609 37.0 30.0 40.0 2.0 41.0 50-51 31.009126497760263 36.0 29.5 39.0 2.0 40.0 52-53 31.529958772608964 36.5 30.5 39.0 2.0 40.0 54-55 31.942604116512513 37.0 31.0 40.0 2.0 40.5 56-57 31.77034436297746 36.5 31.0 40.0 2.0 41.0 58-59 31.419512107586865 36.0 31.0 39.0 2.0 41.0 60-61 30.94155575729522 35.5 30.0 39.0 2.0 40.0 62-63 30.437113797241835 35.0 29.0 39.0 2.0 40.0 64-65 29.878365143364043 35.0 28.5 38.0 2.0 40.0 66-67 29.380323925485854 34.5 28.0 37.5 2.0 40.0 68-69 28.844025703718422 34.0 27.5 37.0 2.0 39.0 70-71 28.312415586976304 34.0 26.0 36.0 2.0 39.0 72-73 27.747905930029102 33.5 26.0 36.0 2.0 38.5 74-75 27.145802358019104 33.0 25.0 35.0 2.0 37.5 76-77 26.55911846588876 33.0 24.0 35.0 2.0 37.0 78-79 25.990932849446406 32.0 22.0 35.0 2.0 36.0 80-81 25.405299478544528 32.0 19.5 35.0 2.0 36.0 82-83 24.76661111018625 31.0 17.5 34.0 2.0 35.0 84-85 24.13581948763362 31.0 9.5 34.0 2.0 35.0 86-87 23.503632719271714 30.5 4.5 34.0 2.0 35.0 88-89 22.845206594220556 30.0 2.0 34.0 2.0 35.0 90-91 22.090710421737036 29.5 2.0 34.0 2.0 35.0 92-93 21.26044354091595 29.0 2.0 34.0 2.0 35.0 94-95 20.336702215175027 28.0 2.0 33.5 2.0 34.5 96-97 19.43626585646019 27.0 2.0 33.0 2.0 34.0 98 18.816691072169448 25.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 166729.0 3 28324.0 4 21434.0 5 18403.0 6 17223.0 7 17986.0 8 20450.0 9 23555.0 10 26190.0 11 28602.0 12 31105.0 13 34659.0 14 30354.0 15 29813.0 16 33424.0 17 37708.0 18 42032.0 19 41866.0 20 43514.0 21 47529.0 22 51913.0 23 56508.0 24 62959.0 25 70257.0 26 79523.0 27 90185.0 28 103809.0 29 120738.0 30 142919.0 31 171475.0 32 211747.0 33 270804.0 34 360411.0 35 494167.0 36 655866.0 37 658854.0 38 270159.0 39 12129.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.92036973722452 16.140119408250143 11.386749185763978 25.55276166876136 2 16.97665907295586 18.513541925330145 37.276179483829544 27.233619517884446 3 21.48028610644518 21.373747905740192 26.729688248674222 30.41627773914041 4 14.084232230688794 13.458324518493425 33.64898031229842 38.808462938519355 5 15.699682330350475 35.59899031068628 32.440877187061645 16.260450171901596 6 36.61308344898381 32.079209848552864 15.903582658810727 15.404124043652601 7 32.573849299714794 29.443967883389767 18.407008518835262 19.575174298060173 8 29.134458297157824 32.97459478921254 18.140057888027645 19.750889025601992 9 27.207180987240875 15.985493758822065 18.024687941103206 38.782637312833856 10-11 27.750334348542005 24.27428797545336 25.21838879140435 22.75698888460029 12-13 27.5705407085818 21.074485016150323 26.0969188161423 25.258055459125572 14-15 24.270412692028668 22.79130136756739 23.428930066913388 29.509355873490556 16-17 25.126352190344285 26.14033750498008 23.888718606560786 24.84459169811484 18-19 25.138583701180963 25.29616006444526 25.347178508093947 24.21807772627983 20-21 25.442832814445186 24.57077183876814 25.342088058403395 24.64430728838327 22-23 25.228219503203487 24.20573986184936 25.314643454941116 25.25139718000604 24-25 25.024744683543894 24.50436534078432 25.404552589078154 25.06633738659363 26-27 25.034290718212844 24.657606718838615 25.442576922319592 24.865525640628945 28-29 25.026306707101348 24.853243952919488 25.36145080164321 24.758998538335952 30-31 25.090146811293828 24.805932070113442 25.231751233089835 24.872169885502895 32-33 24.94076375182802 24.767899446739065 25.244579310177777 25.04675749125514 34-35 25.07544686128359 24.779205263758232 25.37678933625755 24.768558538700628 36-37 25.162988730970508 24.72476259397067 25.24585228120047 24.866396393858352 38-39 25.080160724794503 24.812681077133135 25.273657565386177 24.83350063268618 40-41 25.156471925393113 24.760401429997884 25.27139139968354 24.81173524492546 42-43 25.093946586975953 24.679556742303944 25.25141451058928 24.975082160130828 44-45 25.023776168455242 24.76021712379647 25.20202136551708 25.013985342231216 46-47 25.120333390232663 24.788814207462057 25.250448503263307 24.84040389904197 48-49 25.158904928434794 24.89963770599788 25.027283138298053 24.914174227269275 50-51 24.84314951854997 25.077409271205404 25.127946963565922 24.951494246678703 52-53 25.037496356937478 25.040867549121533 25.06729334591912 24.85434274802187 54-55 24.975280519222707 24.80759573791034 25.178700510349238 25.038423232517715 56-57 24.894237316573875 25.015588653416366 25.175854572262345 24.914319457747414 58-59 25.10277295211896 24.86764295267305 25.137202624434096 24.89238147077389 60-61 25.059857229302708 24.798196791120084 25.261777246027417 24.880168733549787 62-63 24.87895749729975 25.009875642432956 25.246282493037057 24.864884367230232 64-65 24.934985801546862 24.92084495523949 25.19428175043895 24.949887492774693 66-67 24.96034662092544 24.97991645637248 25.098955416544488 24.960781506157595 68-69 24.93512596034172 24.95579523852423 25.199099375868215 24.909979425265835 70-71 24.84652944585071 24.806254931808667 25.262699424285163 25.08451619805546 72-73 25.04643821976526 24.849554285396565 25.168456305069537 24.93555118976864 74-75 24.770917723209458 25.13527352417334 25.12739098315481 24.966417769462385 76-77 25.010965020634004 24.91628414427068 25.041946158409502 25.03080467668582 78-79 24.931293519081347 24.80637856744354 25.255231953731084 25.00709595974403 80-81 24.912057711119314 25.03478656764534 25.124072543688293 24.929083177547056 82-83 25.072280654197755 24.92637266995212 25.058694432516226 24.942652243333903 84-85 24.933237476992197 25.00788730351495 25.02440015781121 25.034475061681643 86-87 24.979426245206152 24.96481290802804 25.175240620647756 24.88052022611805 88-89 24.911908192301915 24.770394419550815 25.09041037039338 25.22728701775389 90-91 24.94796029661898 24.814189675231642 25.115108425323257 25.12274160282612 92-93 25.03921973332644 24.983890295709568 25.15240838857682 24.824481582387172 94-95 25.084280981995192 24.78958122339056 25.102002058120572 25.02413573649368 96-97 24.992369576766944 24.807404425895207 25.18025551575635 25.0199704815815 98 25.02280047112288 24.994593031133718 24.913662216014703 25.0689442817287 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 393.0 1 279.5 2 235.5 3 330.5 4 327.0 5 346.5 6 536.0 7 929.0 8 1368.0 9 1459.0 10 1333.5 11 1377.5 12 1591.5 13 1937.5 14 2357.5 15 2712.5 16 3055.0 17 3303.5 18 3379.0 19 3357.0 20 3201.5 21 3061.5 22 3006.5 23 3101.5 24 3493.0 25 4146.5 26 5289.5 27 6938.0 28 9044.5 29 11632.5 30 15134.5 31 19676.5 32 24985.5 33 30686.0 34 37263.0 35 45418.0 36 54896.5 37 65137.0 38 75734.5 39 86623.5 40 98680.0 41 112202.5 42 126334.5 43 142527.5 44 157590.0 45 170916.0 46 187168.5 47 203845.5 48 211711.0 49 211821.5 50 211708.0 51 212996.0 52 217125.0 53 220752.5 54 219163.5 55 211935.0 56 199548.0 57 186671.5 58 173606.5 59 157131.0 60 138689.0 61 117418.0 62 95290.0 63 73855.5 64 55489.5 65 42528.5 66 32749.5 67 25206.5 68 19513.0 69 15199.5 70 11715.5 71 9231.5 72 7380.0 73 5664.0 74 4432.0 75 3471.0 76 2541.5 77 1641.5 78 988.0 79 618.5 80 397.5 81 252.0 82 135.5 83 76.0 84 57.5 85 37.5 86 21.0 87 21.0 88 15.0 89 10.5 90 13.5 91 11.0 92 8.5 93 9.5 94 8.5 95 6.5 96 4.5 97 3.5 98 2.5 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.46744843549304554 2 0.04754262567176389 3 0.055520446896357295 4 0.05268821226106804 5 0.06293614521623679 6 0.06308748599827514 7 0.041532234613669144 8 0.018982458089953934 9 0.011999162004469741 10-11 0.014226033511605568 12-13 0.010669525133704177 14-15 0.014874636863198527 16-17 0.014063882673707328 18-19 0.05372597762361677 20-21 0.08091326811122164 22-23 0.09723645245964443 24-25 0.06741150834222821 26-27 0.0823726256523058 28-29 0.08384279324924984 30-31 0.055909608907313064 32-33 0.03167346366945616 34-35 0.3950534913994114 36-37 0.6185405862466253 38-39 0.5682089661630118 40-41 0.5624580164455542 42-43 0.534092429869222 44-45 0.5205474298767891 46-47 0.5108508097704744 48-49 0.4998894131285534 50-51 0.5147099997124525 52-53 0.5954827370974957 54-55 0.5668252790129468 56-57 0.5236391058527157 58-59 0.5013271505579178 60-61 0.5134452231768463 62-63 0.5265902511024635 64-65 0.5442646924333717 66-67 0.5709547203514219 68-69 0.5251849438406788 70-71 0.4738155583945165 72-73 0.4559141058905508 74-75 0.43692083774473695 76-77 0.4520441058927128 78-79 0.44515810030996755 80-81 0.4422718153953789 82-83 0.4625406701326588 84-85 0.4285106142857482 86-87 0.4311266478038399 88-89 0.4578599159453297 90-91 0.44160159193206616 92-93 0.4362830444490039 94-95 0.44616343550493665 96-97 0.4410827092507918 98 0.43575335171186963 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4625323.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.197530192723114 #Duplication Level Percentage of deduplicated Percentage of total 1 71.8049922617975 36.0443326704983 2 14.370609108197819 14.427381691931638 3 5.537194560928136 8.33860473465517 4 2.65024310205173 5.321426325331916 5 1.4681915644579733 3.6849795192790262 6 0.9241980421128307 2.7835475473808646 7 0.6251853946076549 2.196793390530709 8 0.4288421839902354 1.7221454783010532 9 0.3195928656963808 1.4438495272655683 >10 1.7153133920530834 15.504530306416825 >50 0.10686604458025456 3.6940406436618 >100 0.04712639402789554 4.018334843441897 >500 0.0011255850302759397 0.3606974163474741 >1k 5.195004682189593E-4 0.45933590495767135 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 4.32402234395306E-5 6 0.0 0.0 0.0 0.0 8.64804468790612E-5 7 0.0 0.0 0.0 2.16201117197653E-5 8.64804468790612E-5 8 0.0 0.0 0.0 2.16201117197653E-5 8.64804468790612E-5 9 0.0 0.0 0.0 6.48603351592959E-5 8.64804468790612E-5 10-11 0.0 0.0 0.0 7.567039101917856E-5 8.64804468790612E-5 12-13 0.0 0.0 0.0 1.8377094961800506E-4 9.729050273894386E-5 14-15 0.0 2.16201117197653E-5 0.0 2.0539106133777037E-4 1.1891061445870916E-4 16-17 0.0 2.16201117197653E-5 0.0 3.459217875162448E-4 1.513407820383571E-4 18-19 0.0 4.32402234395306E-5 0.0 5.621229047138978E-4 1.513407820383571E-4 20-21 0.0 4.32402234395306E-5 0.0 5.621229047138978E-4 1.513407820383571E-4 22-23 0.0 4.32402234395306E-5 0.0 6.269832398731938E-4 1.513407820383571E-4 24-25 0.0 4.32402234395306E-5 0.0 6.918435750324897E-4 1.513407820383571E-4 26-27 0.0 4.32402234395306E-5 0.0 8.431843570708467E-4 1.513407820383571E-4 28-29 0.0 4.32402234395306E-5 0.0 0.0015242178762434537 1.513407820383571E-4 30-31 0.0 4.32402234395306E-5 0.0 0.0035673184337612746 1.513407820383571E-4 32-33 0.0 4.32402234395306E-5 0.0 0.007448128487459146 1.6215083789823976E-4 34-35 0.0 4.32402234395306E-5 0.0 0.011847821222431384 1.729608937581224E-4 36-37 0.0 4.32402234395306E-5 0.0 0.018193324012182502 1.729608937581224E-4 38-39 0.0 4.32402234395306E-5 0.0 0.02850611730251055 1.729608937581224E-4 40-41 0.0 4.32402234395306E-5 0.0 0.03960804467061003 1.729608937581224E-4 42-43 0.0 4.32402234395306E-5 0.0 0.04973706701132008 1.9458100547788771E-4 44-45 0.0 4.32402234395306E-5 0.0 0.0601903910278266 1.9458100547788771E-4 46-47 0.0 4.32402234395306E-5 0.0 0.07195173180337891 1.9458100547788771E-4 48-49 0.0 4.32402234395306E-5 0.0 0.08475083794147997 2.1620111719765302E-4 50-51 0.0 4.32402234395306E-5 0.0 0.09812287704015482 2.1620111719765302E-4 52-53 0.0 4.32402234395306E-5 0.0 0.11072740217277799 3.026815640767142E-4 54-55 0.0 4.32402234395306E-5 0.0 0.12328868708196161 3.134916199365969E-4 56-57 0.0 4.32402234395306E-5 0.0 0.13748229042598756 3.459217875162448E-4 58-59 0.0 4.32402234395306E-5 0.0 0.15205424572510934 3.6754189923601013E-4 60-61 0.0 4.32402234395306E-5 0.0 0.16638837979531373 3.6754189923601013E-4 62-63 0.0 4.32402234395306E-5 0.0 0.1803225417987025 4.1078212267554073E-4 64-65 0.0 4.32402234395306E-5 0.0 0.1936405306180779 4.1078212267554073E-4 66-67 0.0 4.32402234395306E-5 0.0 0.2086124579840154 4.1078212267554073E-4 68-69 0.0 6.48603351592959E-5 0.0 0.22433027920428475 4.1078212267554073E-4 70-71 0.0 6.48603351592959E-5 2.16201117197653E-5 0.24128044679258076 4.2159217853542335E-4 72-73 0.0 6.48603351592959E-5 2.16201117197653E-5 0.2571171786273089 4.864525136947193E-4 74-75 0.0 6.48603351592959E-5 2.16201117197653E-5 0.2740241059921653 5.188826812743672E-4 76-77 1.081005585988265E-5 8.64804468790612E-5 2.16201117197653E-5 0.2906067316812253 5.188826812743672E-4 78-79 2.16201117197653E-5 8.64804468790612E-5 2.16201117197653E-5 0.3080974020625154 5.188826812743672E-4 80-81 2.16201117197653E-5 8.64804468790612E-5 2.16201117197653E-5 0.32727444115794724 5.188826812743672E-4 82-83 2.16201117197653E-5 8.64804468790612E-5 2.16201117197653E-5 0.3464514802533791 5.837430164336631E-4 84-85 2.16201117197653E-5 8.64804468790612E-5 2.16201117197653E-5 0.36531502772887425 6.053631281534284E-4 86 2.16201117197653E-5 8.64804468790612E-5 2.16201117197653E-5 0.3806436869381879 6.053631281534284E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 15470 0.0 29.457708 1 GTACCTG 4305 0.0 29.190638 1 TACATGG 15835 0.0 28.167313 2 ACATGGG 16190 0.0 26.813517 3 GTATCAA 10450 0.0 25.460424 1 GAGTACA 11105 0.0 25.409492 1 TACCTGG 4820 0.0 25.202839 2 AGTACAT 10665 0.0 24.370974 2 CATGGGG 12855 0.0 22.501318 4 TCAACGC 12190 0.0 21.397312 4 CAACGCA 12485 0.0 21.001877 5 TATCAAC 12855 0.0 20.36173 2 ATCAACG 12815 0.0 20.317972 3 AACGCAG 13070 0.0 20.196684 6 ACCTGGG 6605 0.0 18.252972 3 ACGCAGA 15095 0.0 17.452969 7 GTGTAGC 2430 0.0 17.42752 1 ATGGGGG 6380 0.0 17.100426 5 GGTATCA 8000 0.0 16.743917 1 AGAGTAC 11615 0.0 16.505764 10-11 >>END_MODULE