##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921450_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4625323 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.76218958113844 33.0 31.0 34.0 30.0 34.0 2 31.872566521300243 34.0 31.0 34.0 30.0 34.0 3 32.00196461955198 34.0 31.0 34.0 30.0 34.0 4 35.56471839912586 37.0 35.0 37.0 33.0 37.0 5 35.33951466740809 37.0 35.0 37.0 33.0 37.0 6 35.37406620034968 37.0 35.0 37.0 33.0 37.0 7 35.293243520506564 37.0 35.0 37.0 33.0 37.0 8 35.24126250209985 37.0 35.0 37.0 33.0 37.0 9 36.83251288612709 39.0 37.0 39.0 33.0 39.0 10-11 36.7311594238932 39.0 37.0 39.0 33.0 39.0 12-13 36.5914580452003 39.0 37.0 39.0 32.0 39.0 14-15 37.84060410483765 40.0 38.0 41.0 33.0 41.0 16-17 37.72674762389567 40.0 38.0 41.0 32.5 41.0 18-19 37.600737721452106 40.0 38.0 41.0 32.0 41.0 20-21 37.469418784374625 40.0 38.0 41.0 32.0 41.0 22-23 37.42949411316788 40.0 37.5 41.0 32.0 41.0 24-25 37.47789711118553 40.0 38.0 41.0 32.0 41.0 26-27 37.352216591144014 40.0 37.0 41.0 32.0 41.0 28-29 37.19902112782178 40.0 37.0 41.0 31.0 41.0 30-31 37.04384937008723 40.0 37.0 41.0 31.0 41.0 32-33 36.86686745985091 40.0 37.0 41.0 30.5 41.0 34-35 36.69946152949751 40.0 36.0 41.0 30.0 41.0 36-37 36.58523491224288 39.0 36.0 41.0 30.0 41.0 38-39 36.53906548796701 39.0 36.0 41.0 30.0 41.0 40-41 36.35343369533328 39.0 36.0 41.0 30.0 41.0 42-43 36.080785060848726 39.0 35.0 40.5 29.5 41.0 44-45 35.842936374389424 39.0 35.0 40.0 28.5 41.0 46-47 35.54065153936276 38.5 35.0 40.0 27.5 41.0 48-49 35.16525181052221 38.0 34.5 40.0 26.5 41.0 50-51 34.847022467403896 38.0 34.0 40.0 26.0 41.0 52-53 34.49264191927785 38.0 34.0 40.0 25.0 41.0 54-55 34.12288482339504 37.5 33.0 40.0 24.0 41.0 56-57 33.69263249290914 37.0 33.0 40.0 23.0 41.0 58-59 33.254763937567176 36.5 32.5 39.0 22.0 40.5 60-61 32.7791022378329 36.0 32.0 39.0 20.5 40.0 62-63 32.296682523577275 35.5 31.0 39.0 19.0 40.0 64-65 31.73161593255217 35.0 31.0 38.0 17.5 40.0 66-67 31.155342880918802 35.0 30.0 37.5 13.0 40.0 68-69 30.606926370331326 34.0 29.5 37.0 8.0 39.0 70-71 30.01357288993655 34.0 29.0 36.0 7.0 39.0 72-73 29.427667754230356 34.0 28.5 36.0 6.5 38.5 74-75 28.87469069727671 33.5 27.5 35.0 2.0 37.5 76-77 27.72095365015589 31.5 26.5 34.0 2.0 36.0 78-79 28.65681121080625 33.0 28.5 35.0 2.0 36.0 80-81 28.664041300467016 34.0 29.0 35.0 2.0 36.0 82-83 28.29309596324408 33.5 27.5 35.0 2.0 36.0 84-85 27.75221665600435 33.0 26.5 35.0 2.0 35.0 86-87 27.176149319733995 33.0 26.0 35.0 2.0 35.0 88-89 26.583329423696465 32.0 25.0 34.0 2.0 35.0 90-91 26.028738209201823 32.0 24.0 34.0 2.0 35.0 92-93 25.510841296921317 32.0 22.5 34.0 2.0 35.0 94-95 24.91805815507371 31.0 19.5 34.0 2.0 35.0 96-97 24.03241135808245 31.0 9.0 34.0 2.0 35.0 98-99 22.899008890838545 31.0 2.0 34.0 2.0 35.0 100-101 19.379217083866358 25.0 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 36798.0 3 18960.0 4 11529.0 5 8561.0 6 7511.0 7 7911.0 8 9329.0 9 10903.0 10 12957.0 11 15510.0 12 17902.0 13 20888.0 14 23270.0 15 26321.0 16 29798.0 17 34223.0 18 35186.0 19 32938.0 20 34043.0 21 35470.0 22 38170.0 23 41973.0 24 47046.0 25 53968.0 26 63662.0 27 76814.0 28 91978.0 29 112104.0 30 136421.0 31 168339.0 32 211862.0 33 279572.0 34 384866.0 35 556397.0 36 796022.0 37 838192.0 38 290876.0 39 7053.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.08297539286704 16.702514930270464 11.780828097057928 25.433681579804567 2 17.12578775579565 18.82865261517952 36.87699215816928 27.16856747085555 3 21.47668376418015 21.627731139132017 26.98532920479157 29.910255891896263 4 14.400724599589287 13.836377988491986 33.51435343612628 38.24854397579245 5 15.73875948830141 35.567069040479744 32.480242907434565 16.21392856378428 6 36.67856584247874 32.2689985330287 15.668252910956939 15.384182713535619 7 32.602591061338174 29.500989513771952 18.391325597954292 19.50509382693559 8 29.181356183837657 33.0538916453601 18.05989297591114 19.7048591948911 9 27.090050158304102 16.016445189518063 18.04898284395139 38.844521808226446 10-11 27.753098191020438 24.344952816520568 25.218724160101175 22.683224832357823 12-13 27.537073192477635 21.11015508784474 26.137579923280573 25.21519179639705 14-15 24.181297262180554 22.8179311721924 23.503221635336214 29.497549930290834 16-17 25.028818749207886 26.15150638251488 24.018291741335883 24.801383126941346 18-19 25.052897150377575 25.399456483537158 25.417808004377545 24.12983836170772 20-21 25.409401504508022 24.536062810057835 25.47900519383876 24.575530491595384 22-23 25.152708908912786 24.239067158178667 25.48606599810681 25.122157934801738 24-25 24.98438232796473 24.471294356540557 25.537762108981017 25.006561206513688 26-27 24.914372138394604 24.70091608134382 25.59863817154809 24.786073608713487 28-29 24.906028085827465 24.86862745861278 25.53604321907923 24.68930123648052 30-31 24.96757962612466 24.81169373373306 25.391476825324343 24.82924981481794 32-33 24.814335503423564 24.738574594387792 25.430833414322983 25.01625648786566 34-35 25.018127111293598 24.74864477748383 25.551837700434714 24.681390410787856 36-37 24.963850018687175 24.778556701387586 25.465457699575733 24.792135580349502 38-39 24.953687856477007 24.804658654581146 25.50771451004271 24.733938978899133 40-41 25.010393227843014 24.766913282150536 25.452460862266513 24.770232627739933 42-43 24.970730799242148 24.752576608552033 25.404779803721766 24.871912788484053 44-45 24.834664128975923 24.741663039386317 25.412099050376924 25.011573781260832 46-47 24.952646119079414 24.841546421292215 25.432412998934957 24.773394460693414 48-49 25.022707121268894 24.934981204060104 25.22526048057155 24.817051194099456 50-51 24.77424022325653 25.07330010301636 25.276889578331303 24.875570095395812 52-53 25.009659014622677 25.085277153722433 25.095817208850708 24.80924662280418 54-55 24.97333860165087 24.857687860834258 25.20492115631282 24.964052381202052 56-57 24.836313664595604 25.07586228964768 25.259315521613644 24.82850852414307 58-59 25.08388153520884 24.915664437536986 25.168114401031033 24.832339626223142 60-61 25.021821324379793 24.894450086409634 25.296941901115726 24.786786688094846 62-63 24.818580473290893 25.010627854276223 25.327517385137003 24.843274287295877 64-65 24.925283985718956 24.94150015810768 25.208580517349954 24.924635338823407 66-67 24.941703842869266 25.029341380760556 25.133535319257906 24.895419457112272 68-69 24.923743883285958 25.0345045407543 25.203944550445854 24.837807025513893 70-71 24.890689146778016 24.89527315901906 25.282503268541273 24.931534425661646 72-73 25.078616173678025 24.880211778417284 25.139690297529814 24.901481750374874 74-75 24.743957022330704 25.2160585691011 25.06434061308417 24.97564379548402 76-77 24.926559925301138 24.969343498750863 25.132085880271482 24.972010695676516 78-79 24.887669882568712 24.88909784216914 25.310313470667705 24.91291880459444 80-81 24.816963518141442 25.13196382632918 25.19817552859604 24.85289712693334 82-83 24.992138993834462 25.01533274655121 25.106431751977148 24.886096507637177 84-85 24.85438005904483 25.091024288821217 25.139776005916374 24.91481964621758 86-87 24.849861606768417 25.0961393293813 25.228563930097213 24.825435133753068 88-89 24.80773677475886 24.914929988108238 25.16055620075523 25.11677703637767 90-91 24.83875988525185 24.965916283725452 25.20218603366419 24.993137797358507 92-93 24.96879858660301 25.16448606459439 25.20947666415469 24.657238684647908 94-95 24.933474798262203 24.97046988079194 25.1205583468236 24.97549697412225 96-97 24.8343589056142 24.976843543651324 25.28794221047943 24.900855340255045 98-99 24.880693453691805 25.041120243657577 25.16887571080668 24.90931059184393 100-101 25.44518478694363 24.35020269898463 25.28182126489053 24.92279124918121 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 46.0 1 45.5 2 114.5 3 204.0 4 169.0 5 144.5 6 309.5 7 665.5 8 1035.5 9 1088.0 10 904.0 11 772.5 12 756.0 13 854.5 14 960.0 15 1069.0 16 1201.0 17 1327.5 18 1473.0 19 1580.5 20 1673.5 21 1851.5 22 2098.0 23 2421.0 24 2845.5 25 3458.5 26 4397.5 27 5752.0 28 7585.0 29 9996.5 30 13107.0 31 16761.5 32 21253.0 33 26682.5 34 32394.5 35 38735.0 36 47803.5 37 57812.5 38 67768.0 39 78425.5 40 89557.5 41 101415.5 42 114261.0 43 129082.0 44 145056.0 45 161330.5 46 174742.5 47 187512.5 48 204282.0 49 212206.5 50 209603.0 51 209871.5 52 213187.0 53 215815.5 54 216340.0 55 210775.5 56 199055.0 57 184339.0 58 170277.5 59 155582.0 60 136799.0 61 116875.5 62 95996.5 63 73770.5 64 55270.0 65 42468.0 66 32713.5 67 25360.5 68 19622.5 69 15380.5 70 12114.5 71 9521.5 72 7350.0 73 5668.5 74 4385.5 75 3426.0 76 2594.0 77 1633.0 78 988.0 79 623.0 80 403.5 81 262.5 82 136.0 83 65.5 84 40.0 85 16.5 86 9.0 87 6.5 88 3.0 89 2.5 90 2.0 91 1.5 92 1.5 93 0.5 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.30745960876678236 2 0.0 3 0.0061401117284133454 4 0.05690413404642227 5 4.756424578348366E-4 6 0.06213620108260548 7 0.07255709493153235 8 0.10120374296022137 9 0.08980994408390505 10-11 0.0933988826293861 12-13 0.09359346363486398 14-15 0.06277399437833855 16-17 0.03452731841646518 18-19 0.03735955305175444 20-21 0.02781427372747806 22-23 0.04113226254685349 24-25 0.03360846366837516 26-27 0.020582346357216567 28-29 0.023111899428429106 30-31 0.0031349161993659684 32-33 0.005329357538922146 34-35 0.007448128487459147 36-37 0.010669525133704177 38-39 0.01569620110854961 40-41 0.019836452502884662 42-43 0.0033294972048438566 44-45 0.013966592170968383 46-47 0.0237388826683023 48-49 0.002637653629811367 50-51 0.0071238268116626665 52-53 0.002378212289174183 54-55 0.00411863128261529 56-57 0.00358893854548104 58-59 0.0010810055859882652 60-61 0.005621229047138979 62-63 0.0147665363045997 64-65 0.0067130446889871265 66-67 0.03747846366621315 68-69 0.05930396644731622 70-71 0.011966731836890093 72-73 0.03099243015028356 74-75 0.049099273715587 76-77 0.29706033502957524 78-79 0.07228684353503528 80-81 0.03281932959060373 82-83 0.026657597750470614 84-85 0.018820307252055694 86-87 0.11535410608080776 88-89 0.5149694410530897 90-91 0.12572094965043523 92-93 0.04615893852169892 94-95 0.008302122900389876 96-97 0.005686089382298274 98-99 0.010204692731729222 100-101 0.007815670386695155 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4625323.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.343514960039776 #Duplication Level Percentage of deduplicated Percentage of total 1 66.80161835063976 30.290201810371016 2 16.53451168070639 14.994657555021254 3 6.55855097925618 8.921632633322583 4 3.2568350810323574 5.907054008766923 5 1.7833961790110449 4.043272566133255 6 1.1040186470276925 3.003605162259783 7 0.7445995150737922 2.3633931475690804 8 0.5414691251557209 1.9641690701518464 9 0.4002710559672067 1.6334726952887961 >10 2.072651019776329 16.895458180271277 >50 0.1387537360179424 4.301549181829078 >100 0.061123576994650194 4.713418607351824 >500 0.0015790168405167716 0.45506058607325983 >1k 6.220365004280011E-4 0.5130547955900746 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.16201117197653E-5 2 0.0 0.0 0.0 0.0 2.16201117197653E-5 3 0.0 0.0 0.0 0.0 2.16201117197653E-5 4 0.0 0.0 0.0 2.16201117197653E-5 2.16201117197653E-5 5 0.0 0.0 0.0 2.16201117197653E-5 2.16201117197653E-5 6 0.0 0.0 0.0 2.16201117197653E-5 2.16201117197653E-5 7 0.0 0.0 0.0 2.16201117197653E-5 2.16201117197653E-5 8 0.0 0.0 0.0 2.16201117197653E-5 2.16201117197653E-5 9 0.0 0.0 0.0 1.0810055859882651E-4 2.16201117197653E-5 10-11 0.0 0.0 0.0 1.297206703185918E-4 2.16201117197653E-5 12-13 0.0 0.0 0.0 1.9458100547788771E-4 9.729050273894386E-5 14-15 0.0 0.0 0.0 1.9458100547788771E-4 1.0810055859882651E-4 16-17 0.0 0.0 0.0 2.4863128477730094E-4 1.0810055859882651E-4 18-19 0.0 0.0 0.0 3.243016757964795E-4 1.297206703185918E-4 20-21 0.0 0.0 0.0 3.243016757964795E-4 1.513407820383571E-4 22-23 0.0 0.0 0.0 3.243016757964795E-4 1.513407820383571E-4 24-25 0.0 0.0 0.0 3.6754189923601013E-4 1.513407820383571E-4 26-27 0.0 0.0 0.0 4.6483240197495396E-4 1.9458100547788771E-4 28-29 0.0 0.0 0.0 0.0011891061445870915 1.9458100547788771E-4 30-31 0.0 0.0 0.0 0.003178156422805499 2.0539106133777037E-4 32-33 0.0 0.0 0.0 0.007080586588223136 2.3782122891741832E-4 34-35 0.0 0.0 0.0 0.011534329602494788 2.3782122891741832E-4 36-37 0.0 0.0 0.0 0.017814972057086608 2.3782122891741832E-4 38-39 0.0 0.0 0.0 0.027814273727478057 2.594413406371836E-4 40-41 0.0 0.0 0.0 0.03875405025767931 2.594413406371836E-4 42-43 0.0 0.0 0.0 0.04876416198393063 2.702513964970663E-4 44-45 0.0 0.0 0.0 0.05896885471565985 2.9187150821683154E-4 46-47 0.0 0.0 0.0 0.07041670387127558 3.026815640767142E-4 48-49 0.0 0.0 0.0 0.08289150833358017 3.243016757964795E-4 50-51 0.0 0.0 0.0 0.095896005533019 3.243016757964795E-4 52-53 0.0 0.0 0.0 0.10803569826366721 3.459217875162448E-4 54-55 0.0 0.0 0.0 0.12004567032399684 3.7835195509589275E-4 56-57 0.0 0.0 0.0 0.13393659210394604 4.1078212267554073E-4 58-59 0.0 0.0 0.0 0.14794642449835396 4.432122902551887E-4 60-61 0.0 0.0 0.0 0.16196706694862176 4.5402234611507133E-4 62-63 0.0 0.0 0.0 0.17546882671761518 4.5402234611507133E-4 64-65 0.0 0.0 0.0 0.1882355026881366 4.5402234611507133E-4 66-67 0.0 0.0 0.0 0.2023210054735637 4.5402234611507133E-4 68-69 0.0 0.0 0.0 0.2173253630070808 4.5402234611507133E-4 70-71 0.0 0.0 0.0 0.2337242177465228 4.6483240197495396E-4 72-73 0.0 0.0 0.0 0.248901536173798 5.080726254144846E-4 74-75 0.0 0.0 0.0 0.26497608923744354 5.837430164336631E-4 76-77 0.0 0.0 0.0 0.2809425417424902 6.702234633127243E-4 78-79 0.0 2.16201117197653E-5 0.0 0.2977197484370281 6.918435750324897E-4 80-81 0.0 2.16201117197653E-5 0.0 0.31651843557736403 7.458938543319028E-4 82-83 0.0 2.16201117197653E-5 0.0 0.3346901394778268 8.648044687906121E-4 84-85 0.0 2.16201117197653E-5 0.0 0.35293751376930865 8.648044687906121E-4 86-87 0.0 2.16201117197653E-5 0.0 0.3720388824737213 8.864245805103774E-4 88-89 0.0 3.243016757964795E-5 0.0 0.3921672064848228 9.188547480900252E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 4395 0.0 27.74238 1 GTATCAA 10565 0.0 27.27398 1 GTACATG 15595 0.0 26.99787 1 GAGTACA 11420 0.0 26.65001 1 TACATGG 16040 0.0 25.84843 2 AGTACAT 10850 0.0 25.518967 2 ACATGGG 15765 0.0 25.156195 3 TACCTGG 4960 0.0 23.458956 2 TCAACGC 12330 0.0 22.920061 4 CAACGCA 12595 0.0 22.276125 5 ATCAACG 12900 0.0 21.90684 3 CATGGGG 12685 0.0 21.417435 4 TATCAAC 13385 0.0 21.360054 2 AACGCAG 13335 0.0 21.005033 6 GGTATCA 7730 0.0 20.640867 1 ACGCAGA 15340 0.0 18.32228 7 AGAGTAC 12020 0.0 17.951117 10-11 GTATAAC 845 0.0 17.473005 1 CGCAGAG 16375 0.0 17.106216 8 ACCTGGG 6685 0.0 16.696249 3 >>END_MODULE