##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921449_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3107619 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.791972568065777 31.0 31.0 34.0 28.0 34.0 2 30.90687693697329 31.0 31.0 34.0 27.0 34.0 3 31.035948100458903 33.0 31.0 34.0 28.0 34.0 4 34.56447588974066 37.0 35.0 37.0 32.0 37.0 5 34.568128847197805 37.0 35.0 37.0 32.0 37.0 6 34.669413142344666 37.0 35.0 37.0 32.0 37.0 7 34.56931721681455 37.0 35.0 37.0 32.0 37.0 8 34.56568421032308 37.0 35.0 37.0 32.0 37.0 9 36.07417962111829 39.0 37.0 39.0 32.0 39.0 10-11 35.96531749870238 39.0 37.0 39.0 32.0 39.0 12-13 35.82648612973469 39.0 37.0 39.0 31.0 39.0 14-15 36.90677621677561 40.0 37.0 41.0 31.0 41.0 16-17 36.77976450781129 40.0 37.0 41.0 31.0 41.0 18-19 36.62347829640635 40.0 37.0 41.0 30.0 41.0 20-21 36.52539629214521 40.0 37.0 41.0 30.0 41.0 22-23 36.569793948357244 40.0 37.0 41.0 30.0 41.0 24-25 36.45176290915971 40.0 37.0 41.0 30.0 41.0 26-27 36.2068979498452 39.5 36.0 41.0 29.0 41.0 28-29 35.998413093754415 39.0 36.0 41.0 28.5 41.0 30-31 35.76054030432945 39.0 36.0 40.0 27.5 41.0 32-33 35.49708957243472 39.0 35.0 40.0 27.0 41.0 34-35 35.08886481901418 38.5 35.0 40.0 25.5 41.0 36-37 34.723053244300544 38.0 34.5 40.0 24.0 41.0 38-39 34.51626727729493 38.0 34.0 40.0 24.0 41.0 40-41 34.26447901110143 38.0 34.0 40.0 23.0 41.0 42-43 33.98654693512944 38.0 33.0 40.0 21.5 41.0 44-45 33.677689092517454 38.0 33.0 40.0 19.5 41.0 46-47 33.390258587040435 38.0 33.0 40.0 18.0 41.0 48-49 33.179423700266995 38.0 33.0 40.0 15.5 41.0 50-51 32.38945073382548 36.5 31.0 39.0 15.0 40.0 52-53 32.87258251413703 37.0 32.5 39.0 17.5 40.0 54-55 33.31908979189534 38.0 33.0 40.0 17.5 41.0 56-57 33.177532059110206 37.0 33.0 40.0 15.0 41.0 58-59 32.85854958410282 37.0 32.5 40.0 12.5 41.0 60-61 32.41460198306163 36.0 32.0 39.0 8.0 41.0 62-63 31.944011958994974 36.0 31.0 39.0 7.0 40.0 64-65 31.421752473517508 35.0 31.0 38.5 2.0 40.0 66-67 30.94974110404139 35.0 30.5 38.0 2.0 40.0 68-69 30.44318721181715 35.0 30.0 37.5 2.0 39.5 70-71 29.93519829811827 34.0 29.0 37.0 2.0 39.0 72-73 29.400189341100052 34.0 29.0 36.0 2.0 39.0 74-75 28.82911273872376 34.0 28.5 35.5 2.0 38.0 76-77 28.27370070140516 33.5 27.0 35.0 2.0 37.0 78-79 27.732073655103797 33.0 26.0 35.0 2.0 36.5 80-81 27.17533198245988 33.0 26.0 35.0 2.0 36.0 82-83 26.576890056342172 32.5 25.0 35.0 2.0 35.5 84-85 25.982508473529094 32.0 23.5 34.0 2.0 35.0 86-87 25.393600052001226 31.5 21.0 34.0 2.0 35.0 88-89 24.768006148758907 31.0 19.0 34.0 2.0 35.0 90-91 24.04870561674388 31.0 13.5 34.0 2.0 35.0 92-93 23.2568802674974 30.0 4.5 34.0 2.0 35.0 94-95 22.361698779676658 30.0 2.0 34.0 2.0 35.0 96-97 21.471590468458327 29.0 2.0 34.0 2.0 35.0 98 20.84190726083217 29.0 2.0 34.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 71682.0 3 12973.0 4 10060.0 5 8800.0 6 8296.0 7 8572.0 8 9786.0 9 11480.0 10 13034.0 11 14484.0 12 16307.0 13 19999.0 14 16299.0 15 15806.0 16 18153.0 17 21641.0 18 24669.0 19 22654.0 20 23197.0 21 25195.0 22 27694.0 23 30634.0 24 35039.0 25 39451.0 26 45184.0 27 52501.0 28 61445.0 29 72000.0 30 88420.0 31 107117.0 32 136014.0 33 179166.0 34 246870.0 35 356705.0 36 491310.0 37 525964.0 38 229242.0 39 9776.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.074125213379354 17.608036483139678 13.982519627343212 24.335318676137764 2 16.059766344744368 19.251301259582572 38.335797894997114 26.353134500675946 3 19.872747188634374 22.559410081699124 28.132910638402002 29.4349320912645 4 14.144037080956503 15.573499454095218 34.682356183631356 35.600107281316916 5 15.769673773636367 35.52280551259474 32.73037919616634 15.977141517602558 6 34.607576228371975 33.33505064181722 16.72199083279265 15.335382297018164 7 30.620741252969008 30.55410149974857 19.613495869944956 19.21166137733746 8 27.723271314730653 32.74681353639928 19.363231906573958 20.166683242296113 9 26.957656257844594 16.31871541138169 19.356688709837297 37.36693962093642 10-11 26.386341451483077 24.925132428303336 26.208735134703698 22.479790985509887 12-13 26.72228008805762 22.289581880764985 26.54907413501214 24.43906389616525 14-15 24.003162395239222 23.815369028448522 24.41318595872054 27.768282617591716 16-17 24.152181126352875 26.622508712887154 25.062524560059142 24.16278560070083 18-19 24.07339615546094 26.052927449328894 26.486391114751477 23.387285280458688 20-21 24.780275281285157 25.147947145297618 26.41739975333957 23.654377820077656 22-23 24.64575109882668 24.781132536752775 26.265078015043347 24.3080383493772 24-25 24.469083862844684 25.01053387463844 26.27409970994612 24.246282552570754 26-27 24.356227132623175 25.267371476908266 26.27088307506949 24.105518315399067 28-29 24.30436178002352 25.35085661172137 26.219183548520235 24.125598059734877 30-31 24.559332416240114 25.152330578565618 25.994875761773635 24.293461243420634 32-33 24.477818050718152 25.22708251517746 25.907090755750694 24.388008678353685 34-35 24.685158967841954 25.191499247703163 25.975203042597627 24.148138741857252 36-37 24.690941801049476 25.077520603744986 25.961746948200577 24.269790647004957 38-39 24.58427331443094 25.236022314513317 25.907920991901452 24.271783379154293 40-41 24.78513576105459 25.13849288026026 25.864999907752335 24.211371450932816 42-43 24.68926010705528 25.128981486335277 25.732534592989957 24.449223813619486 44-45 24.663418592319218 25.124908722726413 25.70249933918004 24.509173345774325 46-47 24.81437179987982 25.08226194259982 25.708363358153854 24.395002899366506 48-49 24.795553246726364 25.20894293216851 25.498412751810278 24.49709106929485 50-51 24.588634146475602 25.42454088376065 25.513425832991082 24.473399136772667 52-53 24.789965893336216 25.3555718451336 25.41890261631201 24.43555964521817 54-55 24.69230370847508 25.219669775135056 25.499172981248847 24.588853535141013 56-57 24.74966747972767 25.30347429086877 25.452060946250292 24.494797283153265 58-59 24.786222768886397 25.22208232147897 25.47624881630224 24.515446093332397 60-61 24.826529217515223 25.1581767875817 25.596227211664523 24.41906678323856 62-63 24.6353330656483 25.318916736257226 25.52362784187515 24.522122356219324 64-65 24.666788127829353 25.28604589225575 25.49878630526469 24.548379674650203 66-67 24.7210547858937 25.208710208863156 25.431319325607994 24.63891567963515 68-69 24.584680900077522 25.210450129353468 25.463947979070493 24.74092099149852 70-71 24.66100968682343 25.075032054961525 25.55696405155311 24.706994206661932 72-73 24.79585837127385 25.08125492359168 25.423523860131443 24.69936284500303 74-75 24.564513290112902 25.395524162350252 25.3397624681128 24.700200079424047 76-77 24.735719988548606 25.096332175746877 25.33226255373498 24.835685281969536 78-79 24.698577840221926 25.09759143529482 25.429216426849017 24.774614297634237 80-81 24.673363617672504 25.195516314362305 25.4097663761077 24.721353691857495 82-83 24.82175918590913 25.088691982412925 25.34784846766251 24.741700364015433 84-85 24.75260677814843 25.163637256915788 25.26490399618981 24.818851968745975 86-87 24.725382441122903 25.13800979826335 25.41552436288904 24.72108339772471 88-89 24.618625579338474 25.042375833755138 25.35115157995376 24.987847006952627 90-91 24.702493904729515 24.944300445273168 25.37520422631282 24.9780014236845 92-93 24.764813572986302 25.05485191558648 25.38688076328976 24.79345374813746 94-95 24.775988784446678 24.995033467719317 25.373104170771764 24.855873577062233 96-97 24.78288691984309 24.901931594812336 25.408174530323098 24.90700695502148 98 24.769723454799532 25.000137382041355 25.176535923141053 25.053603240018063 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1074.0 1 826.0 2 836.5 3 1050.5 4 885.0 5 827.5 6 1289.0 7 2690.5 8 3936.5 9 3763.5 10 2747.0 11 1985.0 12 1886.0 13 2074.5 14 2278.5 15 2449.0 16 2585.0 17 2731.0 18 2831.5 19 2820.5 20 2736.5 21 2539.5 22 2425.0 23 2457.0 24 2573.0 25 2959.0 26 3601.0 27 4537.5 28 5822.5 29 7793.0 30 10507.0 31 13987.0 32 18653.5 33 23529.0 34 28870.0 35 35515.0 36 42982.0 37 50518.0 38 58534.0 39 66555.5 40 74835.0 41 83870.0 42 93087.5 43 102280.5 44 110753.0 45 120018.0 46 130278.0 47 139313.0 48 143914.0 49 143515.5 50 142443.0 51 142373.0 52 142638.0 53 143350.0 54 140566.0 55 134587.5 56 126828.0 57 117377.5 58 107796.5 59 96582.5 60 84077.0 61 70754.5 62 57165.0 63 43803.0 64 32320.0 65 24571.0 66 18825.5 67 14136.5 68 10626.0 69 8073.5 70 5988.0 71 4379.5 72 3284.0 73 2339.0 74 1767.0 75 1285.0 76 832.0 77 504.0 78 295.0 79 177.5 80 102.5 81 60.0 82 34.5 83 24.5 84 19.5 85 13.0 86 10.0 87 8.5 88 8.5 89 7.0 90 5.5 91 4.5 92 5.0 93 8.0 94 5.0 95 4.0 96 5.0 97 2.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.48661048860880307 2 0.05116457326332475 3 0.058984064648851746 4 0.05682807319687517 5 0.06680355603437874 6 0.06384309016002283 7 0.04392430346191087 8 0.020851977028071976 9 0.012324548150851182 10-11 0.014995403233150526 12-13 0.010796046748330474 14-15 0.015461998398130531 16-17 0.014158749833876032 18-19 0.05492951356005996 20-21 0.0817506908021865 22-23 0.09838722185699082 24-25 0.06955485855891601 26-27 0.08438936690759066 28-29 0.08632010552130104 30-31 0.05764863710770207 32-33 0.03343395699408454 34-35 0.410716371601538 36-37 0.6400881189103297 38-39 0.5869284490795043 40-41 0.5827612715715794 42-43 0.5551838883724163 44-45 0.5393840107168865 46-47 0.528587963968556 48-49 0.5182424228967579 50-51 0.5323850832421864 52-53 0.6137496263216308 54-55 0.5859469902842015 56-57 0.5415721811457582 58-59 0.5194169555534317 60-61 0.532127651427025 62-63 0.5445326470201142 64-65 0.5621023684048785 66-67 0.5904037785841829 68-69 0.542634087383299 70-71 0.4915016930968693 72-73 0.4739802401774478 74-75 0.45364312677969854 76-77 0.46805930842873594 78-79 0.46228318207605246 80-81 0.45922617927101106 82-83 0.4792415028998085 84-85 0.4443755814338888 86-87 0.44752912116961574 88-89 0.4749456094843029 90-91 0.4581320940565752 92-93 0.45251686258836754 94-95 0.4638438624554683 96-97 0.45830907842949864 98 0.4523076992385489 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3107619.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.61664017359705 #Duplication Level Percentage of deduplicated Percentage of total 1 75.09654797765748 44.01907331085615 2 14.170383502303654 16.612405417528183 3 4.75099689929676 8.354624271358604 4 2.0317127661133894 4.763687045894883 5 1.0734054266972792 3.145970982855041 6 0.6641583259288973 2.3358437765563655 7 0.42822293141886925 1.7570692639543948 8 0.29431853578104905 1.3801570966638157 9 0.23793097058060864 1.2552042679810418 >10 1.1844419173980536 12.214959623927856 >50 0.05432564559265735 2.1341490327923758 >100 0.01256482995210775 1.1651252218572843 >500 6.051657822550592E-4 0.23676471512520006 >1k 3.300904259536303E-4 0.4193205646208697 >5k 5.5015070992271714E-5 0.20564540802793865 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6377 0.20520533566051694 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3964 0.12755746441246496 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3556 0.11442844183923448 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 3.21789768951728E-5 7 0.0 0.0 0.0 0.0 3.21789768951728E-5 8 0.0 0.0 0.0 0.0 3.21789768951728E-5 9 0.0 0.0 0.0 3.21789768951728E-5 6.43579537903456E-5 10-11 0.0 0.0 0.0 9.65369306855184E-5 6.43579537903456E-5 12-13 0.0 4.826846534275919E-5 0.0 9.65369306855184E-5 2.4134232671379599E-4 14-15 0.0 9.653693068551838E-5 0.0 9.65369306855184E-5 2.574318151613824E-4 16-17 0.0 1.4480539602827758E-4 0.0 1.287159075806912E-4 2.574318151613824E-4 18-19 0.0 1.60894884475864E-4 0.0 2.252528382662096E-4 2.574318151613824E-4 20-21 0.0 1.60894884475864E-4 0.0 2.252528382662096E-4 3.057002805041416E-4 22-23 0.0 1.60894884475864E-4 0.0 3.21789768951728E-4 3.21789768951728E-4 24-25 0.0 1.60894884475864E-4 0.0 4.987741418751784E-4 3.378792573993144E-4 26-27 0.0 1.60894884475864E-4 0.0 7.722954454841473E-4 4.0223721118966E-4 28-29 0.0 1.60894884475864E-4 0.0 0.001769843729234504 4.183266996372464E-4 30-31 0.0 1.60894884475864E-4 0.0 0.005148636303227648 4.3441618808483283E-4 32-33 0.0 1.60894884475864E-4 0.0 0.012517622012222219 4.6659516498000556E-4 34-35 0.0 1.769843729234504E-4 0.0 0.022734447176439583 5.631320956655239E-4 36-37 0.0 2.252528382662096E-4 0.0 0.03591173821501284 5.792215841131104E-4 38-39 0.0 2.574318151613824E-4 0.0 0.05621667263586688 5.792215841131104E-4 40-41 0.0 2.574318151613824E-4 0.0 0.07882240390472578 5.792215841131104E-4 42-43 0.0 2.574318151613824E-4 0.0 0.10247395192267778 5.953110725606969E-4 44-45 0.0 2.574318151613824E-4 0.0 0.12746092748177945 6.43579537903456E-4 46-47 0.0 2.574318151613824E-4 0.0 0.1546360734697529 6.918480032462153E-4 48-49 0.0 2.574318151613824E-4 0.0 0.18068495526639528 7.401164685889743E-4 50-51 0.0 2.574318151613824E-4 0.0 0.20742568506628387 7.401164685889743E-4 52-53 0.0 2.574318151613824E-4 0.0 0.23287925579036556 8.205639108269064E-4 54-55 0.0 4.0223721118966E-4 0.0 0.2607462497815852 8.688323761696656E-4 56-57 0.0 4.183266996372464E-4 0.0 0.28933727075294624 8.688323761696656E-4 58-59 0.0 4.505056765324192E-4 0.0 0.3193280772192473 8.688323761696656E-4 60-61 0.0 4.8268465342759197E-4 0.0 0.34873966210143525 9.010113530648384E-4 62-63 0.0 4.8268465342759197E-4 0.0 0.3790200793597928 9.814587953027704E-4 64-65 0.0 4.8268465342759197E-4 0.0 0.41020150797121524 0.0010297272606455295 66-67 0.0 6.114005610082832E-4 0.0 0.44305624338118665 0.0010458167490931159 68-69 0.0 6.274900494558696E-4 0.0 0.4768602586095657 0.0010619062375407024 70-71 0.0 6.43579537903456E-4 0.0 0.5127880863130262 0.0011262641913310479 72-73 0.0 6.43579537903456E-4 0.0 0.5466886384720907 0.0012710695873593258 74-75 0.0 6.43579537903456E-4 0.0 0.5831313298058739 0.001367606518044844 76-77 0.0 6.43579537903456E-4 0.0 0.6211347015190729 0.0014158749833876032 78-79 0.0 6.596690263510423E-4 0.0 0.6618732862683617 0.001448053960282776 80-81 0.0 6.757585147986288E-4 0.0 0.701308622453396 0.0014641434487303623 82-83 0.0 6.757585147986288E-4 0.0 0.7428034131597213 0.0015124119140731216 84-85 0.0 6.757585147986288E-4 0.0 0.7849096044270549 0.0015124119140731216 86 0.0 6.757585147986288E-4 0.0 0.8172816551835987 0.0015124119140731216 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8880 0.0 29.958399 1 GTACATG 9435 0.0 24.92773 1 TATCAAC 10775 0.0 24.633951 2 TCAACGC 10660 0.0 24.59867 4 CAACGCA 10985 0.0 23.8709 5 ATCAACG 11160 0.0 23.578737 3 TACATGG 9775 0.0 23.402195 2 GGTATCA 6105 0.0 22.918789 1 AACGCAG 11680 0.0 22.522106 6 ACATGGG 10270 0.0 21.202934 3 ACGCAGA 13045 0.0 20.092268 7 CATGGGG 7700 0.0 19.8256 4 CGCAGAG 13655 0.0 19.258095 8 GTATAGC 655 0.0 18.972572 1 GAGTACA 7575 0.0 18.714224 1 GTACCTG 2920 0.0 18.441946 1 AGAGTAC 10370 0.0 18.289602 10-11 TAGGACG 235 3.5508874E-6 17.556887 4 GAGTACT 5425 0.0 17.527777 12-13 GTATAAG 980 0.0 17.377184 1 >>END_MODULE